Citrus Sinensis ID: 048594

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480---
Protein Sequence
MGCCLSKSQDSDSAAQQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGTSYRNLSHIFIGKGKTFSQQ
Secondary Structure (PSIPRED)
ccccccccccccHHHHHcccccccccccccccccccccccccccccccccEEEccccccccccEEEEEEEcccccEEEEEEcccccccccEEEEEEcccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEcccccccccccEEEcccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHccccccccccHHHHHcccccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccEEHHHHHHHHHHccccccHHHHHHHHHHHcccccccHHHHHHHcHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHcccccccccHHHHHHHHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccHHHHEEccHHccccccEEEEEEEccccccEEEEHcHHcccccccEEEEEEEccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEEcccccccEEEccccccEEccccccEEEEcccHHHccHHHHccccEccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccHHHccHHHHHHHHHHccccHHHcccHHHHcccHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccEEEHHHHHHHHHHHcccccHHHHHHHHHHHcccccccEEEHcHcccHHHHHHHHHHHcccccEEEEccccccEcHHHHHHHHHHcccccHHHHHHHHHHHcccccccccHHHHHHHHHccccccccccccccccEEEcccccccc
Coil and Loop (DISEMBL)
mgcclsksqdsdsaaqqqqqtpqlhvhvyddddddddtiLGKAYEDIKLHFTIAEELcrgesgriylctenstglqFACKSisktsksdegylkrehcdggtlvdrisdrERYTERAAASVFRSVVNALHAchsngimhrdlkpenfifttddenatlkaTDFGLAFFFEEGKvyeevvgtplymapellgpckygkeidIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSreidfksdpwptissSAKDLIRRMlirdpnnqiTVAQILkhpwlnyengeawdrpiDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFkqmdtndsgtltyDEFKAGLSKLGSTLTEVDVKQYMQAadidgngttLNLSLVqckdtslkdfniftkpsnILIRIMISIYITADELEAAFKeynmgddatIKEIMFEvdrdkdgrisYEEFCATmktgthlrgtsyrnlshifigkgktfsqq
Flexible Loop (DISEMBL)
MGCCLSKSQDSDSAAQQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISktsksdegylkrehcdggtlvdrisdrERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSreidfksdpwptISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKhketfkqmdtndsGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKdfniftkpsniLIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATmktgthlrgtsyrnlshifigkgktfsqq
Low Complexity Region (SEG)
MGCCLSKsqdsdsaaqqqqqTPQLHVHVYddddddddTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGTSYRNLSHIFIGKGKTFSQQ
Disordered region (IsUnstruct)
***************************************LGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSI*********YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPA*******************TLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGTSYRNLSHIFIGK*******
Disordered Region (DISOPRED)
*****************************************KAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATM****************************
Disordered Region (DISEMBL)
***********************LHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSI*********YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGTSYRNLSHIFIGKGKTFSQQ
Disordered Region (DISPRO)
**************************************ILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKT**************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGCCLSKSQDSDSAAQQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGTSYRNLSHIFIGKGKTFSQQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	483	2.2.26 [Sep-21-2011]
Q9C6P3	521	Calcium-dependent protein	yes	no	0.853	0.790	0.537	1e-135
Q38868	541	Calcium-dependent protein	no	no	0.853	0.761	0.533	1e-135
P49101	513	Calcium-dependent protein	N/A	no	0.853	0.803	0.522	1e-131
P53683	533	Calcium-dependent protein	yes	no	0.850	0.771	0.518	1e-130
P28582	532	Calcium-dependent protein	N/A	no	0.844	0.766	0.516	1e-128
Q9ZSA2	531	Calcium-dependent protein	no	no	0.857	0.779	0.508	1e-128
O49717	554	Calcium-dependent protein	no	no	0.857	0.747	0.510	1e-127
Q1PFH8	551	Calcium-dependent protein	no	no	0.892	0.782	0.482	1e-121
Q8RWL2	534	Calcium-dependent protein	no	no	0.848	0.767	0.461	1e-116
Q3E9C0	523	Calcium-dependent protein	no	no	0.850	0.785	0.467	1e-116

>sp|Q9C6P3|CDPKX_ARATH Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1

 Score =  483 bits (1244), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 250/465 (53%), Positives = 319/465 (68%), Gaps = 53/465 (11%)

Query: 38  TILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLK 94
            IL K YED+KL +T+++EL RG+ G  YLCTE STG +FACKSISK    +K D+  ++
Sbjct: 60  AILEKPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDMR 119

Query: 95  RE-----H--------------------------CDGGTLVDRISDRERYTERAAASVFR 123
           RE     H                          C GG L DRI  +  Y+ERAAASV R
Sbjct: 120 REIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRILAKGHYSERAAASVCR 179

Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL 183
            +VN ++ CH  G+MHRDLKPENF+ ++ DE A +KATDFGL+ F EEG+VY+++VG+  
Sbjct: 180 QIVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGRVYKDIVGSAY 239

Query: 184 YMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP 243
           Y+APE+L   +YGKEIDIWSAG+ILY LLSG  PFWAE+  G   AI+  EIDF+S PWP
Sbjct: 240 YVAPEVL-KRRYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPWP 298

Query: 244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMS 303
           +IS+SAKDL+RRML +DP  +I+ A++LKHPWL  E GEA D+PID+A++SR+KQFRAM+
Sbjct: 299 SISNSAKDLVRRMLTQDPKRRISAAEVLKHPWLR-EGGEASDKPIDSAVLSRMKQFRAMN 357

Query: 304 KLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQ 363
           KLKKLALKVI EN+  EEIQ  K  F  +DT++SGT+TY+E K GL+KLGS LTE +VKQ
Sbjct: 358 KLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSRLTEAEVKQ 417

Query: 364 YMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITAD 414
            M AAD+DGNG+         T++   ++  +   K F  F K          S YIT D
Sbjct: 418 LMDAADVDGNGSIDYIEFITATMHRHRLESNENVYKAFQHFDKDG--------SGYITTD 469

Query: 415 ELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
           ELEAA KEY MGDDATIKEI+ +VD D DGRI+Y+EFCA M++G 
Sbjct: 470 ELEAALKEYGMGDDATIKEILSDVDADNDGRINYDEFCAMMRSGN 514

May play a role in signal transduction pathways that involve calcium as a second messenger.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q38868|CDPK9_ARATH Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1

 Score =  481 bits (1239), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/465 (53%), Positives = 318/465 (68%), Gaps = 53/465 (11%)

Query: 37  DTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYL 93
           ++IL  A+ED+KL +T+ +EL RG+ G  YLCTENSTG ++ACKSISK    +K+D+  +
Sbjct: 77  NSILENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTKADKDDM 136

Query: 94  KRE-----H--------------------------CDGGTLVDRISDRERYTERAAASVF 122
           +RE     H                          C GG L DRI  +  YTERAAASV 
Sbjct: 137 RREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYTERAAASVC 196

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           R +VN +  CH  G++HRDLKPENF+ ++ DE A +KATDFGL+ F EEGKVY ++VG+ 
Sbjct: 197 RQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGKVYRDIVGSA 256

Query: 183 LYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
            Y+APE+L   +YGKE+DIWSAG+ILY LLSG  PFWAE+  G   AI+   IDF+S PW
Sbjct: 257 YYVAPEVLRR-RYGKEVDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGHIDFESQPW 315

Query: 243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAM 302
           P+ISSSAKDL+RRML  DP  +I+ A +L+HPWL  E GEA D+PID+A++SR+KQFRAM
Sbjct: 316 PSISSSAKDLVRRMLTADPKRRISAADVLQHPWLR-EGGEASDKPIDSAVLSRMKQFRAM 374

Query: 303 SKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVK 362
           +KLKKLALKVI EN+  EEIQ  K  F  +DT++SGT+TY+E K GL+KLGS LTE +VK
Sbjct: 375 NKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVK 434

Query: 363 QYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITA 413
           Q M AAD+DGNG+         T++   ++  +   K F  F K S        S YIT 
Sbjct: 435 QLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDS--------SGYITI 486

Query: 414 DELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTG 458
           DELE+A KEY MGDDATIKE++ +VD D DGRI+YEEFCA M++G
Sbjct: 487 DELESALKEYGMGDDATIKEVLSDVDSDNDGRINYEEFCAMMRSG 531

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P49101|CDPK2_MAIZE Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1

 Score =  468 bits (1204), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/465 (52%), Positives = 315/465 (67%), Gaps = 53/465 (11%)

Query: 37  DTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYL 93
           DTILGK YED++  ++  +EL RG+ G  YLCTE ++G Q+ACKSISK    SK+D   +
Sbjct: 51  DTILGKQYEDVRSVYSFGKELGRGQFGVTYLCTEIASGRQYACKSISKRKLVSKADREDI 110

Query: 94  KRE--------------------------H-----CDGGTLVDRISDRERYTERAAASVF 122
           +RE                          H     C GG L DRI  +  YTERAAA++ 
Sbjct: 111 RREIQIMQHLSGQPNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYTERAAATIC 170

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           R+VVN ++ CH  G+MHRDLKPENF+  T +ENA LKATDFGL+ F EEGK+Y ++VG+ 
Sbjct: 171 RAVVNVVNICHFMGVMHRDLKPENFLLATMEENAMLKATDFGLSVFIEEGKMYRDIVGSA 230

Query: 183 LYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
            Y+APE+L    YGKEID+WSAG+ILY LLSG  PFWAE   G   AI+  EIDF+S PW
Sbjct: 231 YYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAEIEKGIFDAILHEEIDFESQPW 289

Query: 243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAM 302
           P+IS SAKDL+R+ML RDP  ++T AQ+L+H WL  E GEA D+PID+A++SR+KQFRAM
Sbjct: 290 PSISESAKDLVRKMLTRDPKKRLTSAQVLQHQWLR-EGGEASDKPIDSAVLSRMKQFRAM 348

Query: 303 SKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVK 362
           +KLKK+ALKVI  NL  EEI+  K+ F  MDT++SGT+TY+E KAGL+KLGS L+E +VK
Sbjct: 349 NKLKKMALKVIASNLNEEEIKGLKQMFMNMDTDNSGTITYEELKAGLAKLGSKLSEAEVK 408

Query: 363 QYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITA 413
           Q M+AAD+DGNG+         T++   ++  +   K F  F K +        S +IT 
Sbjct: 409 QLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDN--------SGFITR 460

Query: 414 DELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTG 458
           DELE+A  E+ MGD +TI+EI+ EVD D DGRI+YEEFCA M+ G
Sbjct: 461 DELESALIEHEMGDTSTIREIISEVDTDNDGRINYEEFCAMMRGG 505

May play a role in signal transduction pathways that involve calcium as a second messenger.

Zea mays (taxid: 4577)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P53683|CDPK2_ORYSJ Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2

 Score =  466 bits (1200), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 241/465 (51%), Positives = 319/465 (68%), Gaps = 54/465 (11%)

Query: 37  DTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYL 93
           DTILGK Y+D++  +++ +EL RG+ G  YLCTE ++G Q+ACKSISK    SK+D+  +
Sbjct: 71  DTILGKPYDDVRSVYSLGKELGRGQFGVTYLCTEIASGKQYACKSISKRKLVSKADKEDI 130

Query: 94  KRE--------------------------H-----CDGGTLVDRISDRERYTERAAASVF 122
           +RE                          H     C GG L DRI  +  Y+ERAAA++ 
Sbjct: 131 RREIQIMQHLSGQQNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYSERAAATIC 190

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           R+VVN ++ CH  G+MHRDLKPENF+  T +ENA LKATDFGL+ F EEGK+Y ++VG+ 
Sbjct: 191 RAVVNVVNICHFMGVMHRDLKPENFLLATKEENAMLKATDFGLSVFIEEGKMYRDIVGSA 250

Query: 183 LYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
            Y+APE+L    YGKEID+WSAG+ILY LLSG  PFWAE+  G   AI+  EIDF+S PW
Sbjct: 251 YYVAPEVLRR-NYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILQGEIDFESQPW 309

Query: 243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAM 302
           P+IS SAKDL+R+ML +DP  +IT AQ+L+HPWL   +GEA D+PID+A++SR+KQFRAM
Sbjct: 310 PSISESAKDLVRKMLTQDPKKRITSAQVLQHPWLR--DGEASDKPIDSAVLSRMKQFRAM 367

Query: 303 SKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVK 362
           +KLKK+ALKVI  NL  EEI+  K+ F  MDT++SGT+TY+E KAGL+KLGS L+E +VK
Sbjct: 368 NKLKKMALKVIASNLNEEEIKGLKQMFTNMDTDNSGTITYEELKAGLAKLGSKLSEAEVK 427

Query: 363 QYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITA 413
           Q M+AAD+DGNG+         T++   ++  +   K F  F K +        S +IT 
Sbjct: 428 QLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDN--------SGFITR 479

Query: 414 DELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTG 458
           DELE+A  E+ MGD +TIK+I+ EVD D DGRI+YEEFCA M+ G
Sbjct: 480 DELESALIEHEMGDTSTIKDIISEVDTDNDGRINYEEFCAMMRGG 524

May play a role in signal transduction pathways that involve calcium as a second messenger.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P28582|CDPK_DAUCA Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2

 Score =  458 bits (1179), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 237/459 (51%), Positives = 313/459 (68%), Gaps = 51/459 (11%)

Query: 35  DDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEG 91
           + +TILGK +EDI+  +T+ +EL RG+ G +Y CTENS+G  +ACKSI K    SK+D+ 
Sbjct: 65  ESNTILGKPFEDIRGKYTLGKELGRGQFGCVYQCTENSSGQLYACKSILKRKLVSKNDKE 124

Query: 92  YLKRE-----H--------------------------CDGGTLVDRISDRERYTERAAAS 120
            +KRE     H                          C GG L DRI  +  Y+ERAAA+
Sbjct: 125 DIKREIQILQHLSGQPNIVEFKGVFEDRQSVHLVMELCAGGELFDRIIAQGHYSERAAAT 184

Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG 180
           + R +VN +H CH  G+MHRDLKPENF+ ++ D++A LKATDFGL+ F EEGKVY  +VG
Sbjct: 185 ICRQIVNVVHVCHFMGVMHRDLKPENFLLSSKDKDAMLKATDFGLSVFIEEGKVYRNIVG 244

Query: 181 TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
           +  Y+APE+L    YGKEIDIWSAG+ILY LLSG  PFWAE+  G   AI+   IDF+S+
Sbjct: 245 SAYYVAPEVLRRS-YGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDAILEGVIDFESE 303

Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFR 300
           PWP++S+SAKDL+R+ML +DP  +IT AQ+L HPW+  E GEA D+PID+A++SR+KQFR
Sbjct: 304 PWPSVSNSAKDLVRKMLTQDPRRRITSAQVLDHPWMR-EGGEASDKPIDSAVLSRMKQFR 362

Query: 301 AMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
           AM+KLK+LALKVI E+L  EEI+  K  F  MDT+ SGT+TY+E K+GL++LGS L+EV+
Sbjct: 363 AMNKLKQLALKVIAESLSEEEIKGLKSMFANMDTDKSGTITYEELKSGLARLGSKLSEVE 422

Query: 361 VKQYMQAADIDGNGTTLNLSLV-------QCKDTSLKDFNIFTKPSNILIRIMISIYITA 413
           V+Q M AAD+DGNGT   L  +       + +    + F  F K +        S +IT 
Sbjct: 423 VQQLMDAADVDGNGTIDYLEFITATMHRHKLESYEHQAFQYFDKDN--------SGFITK 474

Query: 414 DELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFC 452
           DELE+A KEY MGD+ATIK+I+ EVD D DGRI+Y+EFC
Sbjct: 475 DELESAMKEYGMGDEATIKDIISEVDSDNDGRINYDEFC 513

May play a role in signal transduction pathways that involve calcium as a second messenger.

Daucus carota (taxid: 4039)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZSA2|CDPKL_ARATH Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1

 Score =  457 bits (1176), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 238/468 (50%), Positives = 314/468 (67%), Gaps = 54/468 (11%)

Query: 35  DDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEG 91
           D DTILGK +EDI+  +++ +EL RG+ G  Y+C E  TG  +ACKSI K    SK D+ 
Sbjct: 64  DPDTILGKPFEDIRKFYSLGKELGRGQFGITYMCKEIGTGNTYACKSILKRKLISKQDKE 123

Query: 92  YLKRE--------------------------H-----CDGGTLVDRISDRERYTERAAAS 120
            +KRE                          H     C GG L DRI  +  Y+ERAAA 
Sbjct: 124 DVKREIQIMQYLSGQPNIVEIKGAYEDRQSIHLVMELCAGGELFDRIIAQGHYSERAAAG 183

Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG 180
           + RS+VN +  CH  G++HRDLKPENF+ ++ +ENA LKATDFGL+ F EEGKVY ++VG
Sbjct: 184 IIRSIVNVVQICHFMGVVHRDLKPENFLLSSKEENAMLKATDFGLSVFIEEGKVYRDIVG 243

Query: 181 TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
           +  Y+APE+L    YGKEIDIWSAG+ILY LLSG  PFWAE+  G    ++  EIDF S+
Sbjct: 244 SAYYVAPEVLRRS-YGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDEVIKGEIDFVSE 302

Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFR 300
           PWP+IS SAKDL+R+ML +DP  +IT AQ+L+HPW+  + GEA D+PID+A++SR+KQFR
Sbjct: 303 PWPSISESAKDLVRKMLTKDPKRRITAAQVLEHPWI--KGGEAPDKPIDSAVLSRMKQFR 360

Query: 301 AMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
           AM+KLKKLALKVI E+L  EEI+  K  F  +DT+ SGT+TY+E K GL++LGS L+E +
Sbjct: 361 AMNKLKKLALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTRLGSRLSETE 420

Query: 361 VKQYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYI 411
           VKQ M+AAD+DGNGT         T++   +   +   K F  F K +        S +I
Sbjct: 421 VKQLMEAADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDKDN--------SGHI 472

Query: 412 TADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
           T DELE+A KEY MGD+A+IKE++ EVD D DGRI++EEFCA M++G+
Sbjct: 473 TRDELESAMKEYGMGDEASIKEVISEVDTDNDGRINFEEFCAMMRSGS 520

May play a role in signal transduction pathways that involve calcium as a second messenger. Mediates the phosphorylation and activation of the S-type anion efflux channel SLAC1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O49717|CDPKF_ARATH Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1

 Score =  454 bits (1167), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/468 (51%), Positives = 305/468 (65%), Gaps = 54/468 (11%)

Query: 37  DTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYL 93
           +TILGK +E+I+  +T+ +EL RG+ G  Y C ENSTG  +ACKSI K   T K D   +
Sbjct: 88  ETILGKPFEEIRKLYTLGKELGRGQFGITYTCKENSTGNTYACKSILKRKLTRKQDIDDV 147

Query: 94  KRE--------------------------H-----CDGGTLVDRISDRERYTERAAASVF 122
           KRE                          H     C G  L DRI  +  Y+E+AAA V 
Sbjct: 148 KREIQIMQYLSGQENIVEIKGAYEDRQSIHLVMELCGGSELFDRIIAQGHYSEKAAAGVI 207

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           RSV+N +  CH  G++HRDLKPENF+  + DENA LKATDFGL+ F EEGKVY ++VG+ 
Sbjct: 208 RSVLNVVQICHFMGVIHRDLKPENFLLASTDENAMLKATDFGLSVFIEEGKVYRDIVGSA 267

Query: 183 LYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
            Y+APE+L    YGKEIDIWSAG+ILY LL G  PFW+E+  G    I+  EIDF S PW
Sbjct: 268 YYVAPEVLRRS-YGKEIDIWSAGIILYILLCGVPPFWSETEKGIFNEIIKGEIDFDSQPW 326

Query: 243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAM 302
           P+IS SAKDL+R++L +DP  +I+ AQ L+HPW+    GEA D+PID+A++SR+KQFRAM
Sbjct: 327 PSISESAKDLVRKLLTKDPKQRISAAQALEHPWIR--GGEAPDKPIDSAVLSRMKQFRAM 384

Query: 303 SKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVK 362
           +KLKKLALKVI E+L  EEI+  K  F  MDT+ SGT+TY+E K GL+KLGS LTE +VK
Sbjct: 385 NKLKKLALKVIAESLSEEEIKGLKTMFANMDTDKSGTITYEELKNGLAKLGSKLTEAEVK 444

Query: 363 QYMQAADIDGNGTTLNLSLVQCK---------DTSLKDFNIFTKPSNILIRIMISIYITA 413
           Q M+AAD+DGNGT   +  +            +   K F  F K +        S +IT 
Sbjct: 445 QLMEAADVDGNGTIDYIEFISATMHRYRFDRDEHVFKAFQYFDKDN--------SGFITM 496

Query: 414 DELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHL 461
           DELE+A KEY MGD+A+IKE++ EVD D DGRI+YEEFCA M++G  L
Sbjct: 497 DELESAMKEYGMGDEASIKEVIAEVDTDNDGRINYEEFCAMMRSGITL 544

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q1PFH8|CDPKJ_ARATH Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1

 Score =  435 bits (1119), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/485 (48%), Positives = 305/485 (62%), Gaps = 54/485 (11%)

Query: 17  QQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQ 76
           Q Q+  +L  H         + ILG+ +EDIK  +++  EL RG+ G  Y+CTE S+G  
Sbjct: 64  QPQEKQKLINHQKQSTLQQPEPILGRPFEDIKEKYSLGRELGRGQFGITYICTEISSGKN 123

Query: 77  FACKSISKT----SKSDEG------------------------------YLKREHCDGGT 102
           FACKSI K     +K  E                               +L  E C+GG 
Sbjct: 124 FACKSILKRKLIRTKDREDVRREIQIMHYLSGQPNIVEIKGAYEDRQSVHLVMELCEGGE 183

Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE-NATLKAT 161
           L D+I+ R  Y+E+AAA + RSVV  +  CH  G++HRDLKPENF+ ++ DE ++ LKAT
Sbjct: 184 LFDKITKRGHYSEKAAAEIIRSVVKVVQICHFMGVIHRDLKPENFLLSSKDEASSMLKAT 243

Query: 162 DFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE 221
           DFG++ F EEGKVYE++VG+  Y+APE+L    YGK IDIWSAG+ILY LL G  PFWAE
Sbjct: 244 DFGVSVFIEEGKVYEDIVGSAYYVAPEVLKR-NYGKAIDIWSAGVILYILLCGNPPFWAE 302

Query: 222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENG 281
           +  G    I+  EIDF+S+PWP+IS SAKDL+R ML  DP  + T AQ+L+HPW+  E G
Sbjct: 303 TDKGIFEEILRGEIDFESEPWPSISESAKDLVRNMLKYDPKKRFTAAQVLEHPWIR-EGG 361

Query: 282 EAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLT 341
           EA D+PID+A++SR+KQ RAM+KLKKLA K I +NL  EE++  K  F  MDT+ SGT+T
Sbjct: 362 EASDKPIDSAVLSRMKQLRAMNKLKKLAFKFIAQNLKEEELKGLKTMFANMDTDKSGTIT 421

Query: 342 YDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT---------TLNLSLVQCKDTSLKDF 392
           YDE K+GL KLGS LTE +VKQ ++ AD+DGNGT         T+N   V+ +D   K F
Sbjct: 422 YDELKSGLEKLGSRLTETEVKQLLEDADVDGNGTIDYIEFISATMNRFRVEREDNLFKAF 481

Query: 393 NIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFC 452
             F K +        S +I+  ELE A KEYNMGDD  IKEI+ EVD D DG I+Y+EFC
Sbjct: 482 QHFDKDN--------SGFISRQELETAMKEYNMGDDIMIKEIISEVDADNDGSINYQEFC 533

Query: 453 ATMKT 457
             MK+
Sbjct: 534 NMMKS 538

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8RWL2|CDPKT_ARATH Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2

 Score =  418 bits (1075), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/464 (46%), Positives = 298/464 (64%), Gaps = 54/464 (11%)

Query: 39  ILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS------------ 86
           IL +   D+   + + +EL RG+ G  Y CT+ S G ++ACKSISK              
Sbjct: 73  ILNRPMIDLSALYDLHKELGRGQFGITYKCTDKSNGREYACKSISKRKLIRRKDIEDVRR 132

Query: 87  ----------------------KSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRS 124
                                   D  +L  E C GG L DRI  +  Y+E+ AA++FR 
Sbjct: 133 EVMILQHLTGQPNIVEFRGAYEDKDNLHLVMELCSGGELFDRIIKKGSYSEKEAANIFRQ 192

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           +VN +H CH  G++HRDLKPENF+  +++E++ +KATDFGL+ F EEGKVY ++VG+  Y
Sbjct: 193 IVNVVHVCHFMGVVHRDLKPENFLLVSNEEDSPIKATDFGLSVFIEEGKVYRDIVGSAYY 252

Query: 185 MAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT 244
           +APE+L    YGKEID+WSAG++LY LLSG  PFW E+      AI+  ++D ++ PWPT
Sbjct: 253 VAPEVLHR-NYGKEIDVWSAGVMLYILLSGVPPFWGETEKTIFEAILEGKLDLETSPWPT 311

Query: 245 ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSK 304
           IS SAKDLIR+MLIRDP  +IT A+ L+HPW+   + +  D+PI++A++ R+KQFRAM+K
Sbjct: 312 ISESAKDLIRKMLIRDPKKRITAAEALEHPWMT--DTKISDKPINSAVLVRMKQFRAMNK 369

Query: 305 LKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQY 364
           LKKLALKVI ENL  EEI+  K+TFK MDT++SGT+T+DE + GL +LGS LTE ++KQ 
Sbjct: 370 LKKLALKVIAENLSEEEIKGLKQTFKNMDTDESGTITFDELRNGLHRLGSKLTESEIKQL 429

Query: 365 MQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADE 415
           M+AAD+D +GT         T++   ++ ++  ++ F  F K          S +IT DE
Sbjct: 430 MEAADVDKSGTIDYIEFVTATMHRHRLEKEENLIEAFKYFDKDR--------SGFITRDE 481

Query: 416 LEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
           L+ +  EY MGDDATI E++ +VD D DGRI+YEEF A M+ GT
Sbjct: 482 LKHSMTEYGMGDDATIDEVINDVDTDNDGRINYEEFVAMMRKGT 525

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q3E9C0|CDPKY_ARATH Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1

 Score =  418 bits (1074), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/464 (46%), Positives = 299/464 (64%), Gaps = 53/464 (11%)

Query: 39  ILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKR 95
           +LG+  ED+K  +T+ +EL RG+ G  +LCT+ +TGLQFACK+I+K    +K D   ++R
Sbjct: 56  VLGRPMEDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKLVNKEDIEDVRR 115

Query: 96  E--------------------------H-----CDGGTLVDRISDRERYTERAAASVFRS 124
           E                          H     C GG L DRI  +  Y+ERAAAS+ R+
Sbjct: 116 EVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLRT 175

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           +V  +H CHS G++HRDLKPENF+  + DEN+ LKATDFGL+ F++ G+V++++VG+  Y
Sbjct: 176 IVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPGEVFKDIVGSAYY 235

Query: 185 MAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT 244
           +APE+L   KYG E DIWS G++LY LL G  PFWAES  G   AI+S ++DF SDPWP 
Sbjct: 236 IAPEVLR-RKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSGQVDFSSDPWPV 294

Query: 245 ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSK 304
           IS  AKDL+R+ML  DP  ++T AQ+L HPW+  E+GEA D P+D A++SR+KQF+AM+ 
Sbjct: 295 ISPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIK-EDGEAPDVPLDNAVMSRLKQFKAMNN 353

Query: 305 LKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQY 364
            KK+AL+VI   L  EEI   KE FK MDT++SGT+T +E + GL+K G+ L+E +V+Q 
Sbjct: 354 FKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEVQQL 413

Query: 365 MQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADE 415
           M+AAD DGNGT         T++++ +  ++     F  F K +        S YIT +E
Sbjct: 414 MEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDN--------SGYITTEE 465

Query: 416 LEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
           LE A +E+ M D   IKEI+ EVD D DGRI+YEEF A M+ G 
Sbjct: 466 LEQALREFGMNDGRDIKEIISEVDGDNDGRINYEEFVAMMRKGN 509

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	483
255583607	533	calcium-dependent protein kinase, putati	0.863	0.782	0.542	1e-136
225460973	536	PREDICTED: calcium-dependent protein kin	0.857	0.772	0.541	1e-136
449470453	519	PREDICTED: calcium-dependent protein kin	0.929	0.865	0.497	1e-134
351727903	538	calmodulin-like domain protein kinase is	0.867	0.778	0.535	1e-134
15223629	521	calcium-dependent protein kinase 33 [Ara	0.853	0.790	0.537	1e-134
15231140	541	calmodulin-domain protein kinase 9 [Arab	0.853	0.761	0.533	1e-133
356569794	551	PREDICTED: calcium-dependent protein kin	0.867	0.760	0.531	1e-133
356553567	539	PREDICTED: calcium-dependent protein kin	0.873	0.782	0.518	1e-133
297847416	521	calcium-dependent protein kinase 33 [Ara	0.853	0.790	0.533	1e-132
297830722	541	calmodulin-domain protein kinase 9 [Arab	0.855	0.763	0.525	1e-132

>gi|255583607|ref|XP_002532559.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223527714|gb|EEF29820.1| calcium-dependent protein kinase, putative [Ricinus communis]

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 255/470 (54%), Positives = 324/470 (68%), Gaps = 53/470 (11%)

Query: 37  DTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYL 93
           DTIL K YED+KLH+TI +EL RG+ G  YLCTE STG  +ACKSISK    +++D+  +
Sbjct: 71  DTILEKPYEDVKLHYTIGKELGRGQFGVTYLCTEISTGKLYACKSISKRKLVTRNDKEDM 130

Query: 94  KRE--------------------------H-----CDGGTLVDRISDRERYTERAAASVF 122
           KRE                          H     C GG L DRI  +  Y+E+ AAS+ 
Sbjct: 131 KREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSEKEAASIC 190

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           RS+VN +HACH  G+MHRDLKPENF+ ++ D+NA LKATDFGL+ F EEGK Y ++VG+ 
Sbjct: 191 RSIVNVVHACHFMGVMHRDLKPENFLLSSKDQNALLKATDFGLSVFIEEGKTYRDIVGSA 250

Query: 183 LYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
            Y+APE+L   +YGKE+DIWSAG++LY LLSG  PFWAES  G   AI+  +IDF+S PW
Sbjct: 251 YYVAPEVLR-RRYGKEMDIWSAGVMLYILLSGVPPFWAESEKGIFDAILQGDIDFESPPW 309

Query: 243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAM 302
           PTISSSAKDL+RRML +DP  +IT  Q+L+HPWL  E G+A D+PID+A++SR+KQFRAM
Sbjct: 310 PTISSSAKDLVRRMLTQDPKKRITSTQVLEHPWLK-EGGDASDKPIDSAVLSRMKQFRAM 368

Query: 303 SKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVK 362
           +KLKK+ALKVI ENL ++EIQ  K  F  +DT++SGT+TYDE KAGL++LGS LTE +VK
Sbjct: 369 NKLKKMALKVIAENLSSDEIQGLKSMFANIDTDNSGTITYDELKAGLARLGSKLTETEVK 428

Query: 363 QYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITA 413
           Q M AAD+DGNGT         T++   ++ ++   K F  F K +        S +IT 
Sbjct: 429 QLMDAADVDGNGTIDYLEFITATMHRHRLEREEHLYKAFQYFDKDN--------SGFITR 480

Query: 414 DELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRG 463
           DELE A K+Y MGDDATIKEI+ EVD D DGRI+YEEFC  MKTG   +G
Sbjct: 481 DELETAMKDYEMGDDATIKEIISEVDADNDGRINYEEFCTMMKTGNQHQG 530

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460973|ref|XP_002278179.1| PREDICTED: calcium-dependent protein kinase 9-like [Vitis vinifera]

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/467 (54%), Positives = 324/467 (69%), Gaps = 53/467 (11%)

Query: 37  DTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYL 93
           DTILGK++ED+KLH+TI +EL RG+ G  YLCTENSTGLQ+ACKSISK    +K+D+  +
Sbjct: 74  DTILGKSFEDVKLHYTIGKELGRGQFGVTYLCTENSTGLQYACKSISKRKLVTKNDKEDI 133

Query: 94  KRE--------------------------H-----CDGGTLVDRISDRERYTERAAASVF 122
           +RE                          H     C GG L DRI  +  Y+ERAAAS+ 
Sbjct: 134 RREIQIMQDLSGQPNIVEFKGAYEDRLSVHLVMELCAGGELFDRIIAKGHYSERAAASIC 193

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           R++VN +H CH  G+MHRDLKPENF+ ++  ENA LKATDFGL+ F EEGKVY ++VG+ 
Sbjct: 194 RAIVNVVHICHFMGVMHRDLKPENFLLSSKGENALLKATDFGLSVFIEEGKVYRDIVGSA 253

Query: 183 LYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
            Y+APE+L   +YGKEIDIWSAG+ILY LLSG  PFWAE+  G   AI+   IDF++ PW
Sbjct: 254 YYVAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGHIDFETSPW 312

Query: 243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAM 302
           P+ISSSAKDL+R+ML +DP  +IT AQ+L+HPW+  E+GEA D+PID+A++SR+KQFRAM
Sbjct: 313 PSISSSAKDLVRKMLTQDPQKRITSAQVLEHPWIK-EDGEASDKPIDSAVLSRMKQFRAM 371

Query: 303 SKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVK 362
           +KLKKLALKVI ENL  EEIQ  K  F  MDT+ SGT+TY+E K+GL++LGS LTE +V+
Sbjct: 372 NKLKKLALKVIAENLSEEEIQGLKAMFTNMDTDKSGTITYEELKSGLARLGSKLTEAEVQ 431

Query: 363 QYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITA 413
           Q M+AAD+DGNGT         T+N   ++  +   K F  F K S        S +IT 
Sbjct: 432 QLMEAADVDGNGTIDYIEFITATVNRHKLERDEHLFKAFQYFDKDS--------SGFITR 483

Query: 414 DELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTH 460
           DEL+AA KE+ MGDD TI EI+ EVD D D +I+Y EFC+ M+ GT 
Sbjct: 484 DELKAAMKEHGMGDDDTIAEIISEVDTDNDDKINYGEFCSMMRGGTQ 530

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449470453|ref|XP_004152931.1| PREDICTED: calcium-dependent protein kinase-like [Cucumis sativus] gi|449532030|ref|XP_004172987.1| PREDICTED: calcium-dependent protein kinase-like [Cucumis sativus]

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 260/523 (49%), Positives = 338/523 (64%), Gaps = 74/523 (14%)

Query: 1   MGCCLSKSQDSDS--AAQQQQQTPQLHVHVYDDDDDD-------------------DDTI 39
           MG C SK + S      +QQ + P  H H   +                        DTI
Sbjct: 1   MGICTSKGKYSRQYDHYEQQPKAPAQHTHRSPEYRQTAGGAKPSGPPKSPKHTPFRSDTI 60

Query: 40  LGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKRE 96
           LGK  ED+KLH+TI +EL RG+ G  YLCTENS+G Q+ACKSI K    +K+D+  ++RE
Sbjct: 61  LGKPLEDVKLHYTIGKELGRGQFGVTYLCTENSSGKQYACKSILKRKLVTKNDKEDIRRE 120

Query: 97  -H------------------------------CDGGTLVDRISDRERYTERAAASVFRSV 125
            H                              C GG L DRI  +  Y+E+AAAS+ RS+
Sbjct: 121 IHIMQHLSGQPNIVEFKGAYEDKLSVHLIMELCAGGELFDRIIAKGHYSEKAAASICRSI 180

Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           VN +H CH  G+MHRDLKPENF+  + +E+A LKATDFGL+ F EEGKVY ++VG+  Y+
Sbjct: 181 VNVVHICHFMGVMHRDLKPENFLLASKEEDAMLKATDFGLSVFIEEGKVYRDIVGSAYYV 240

Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE+L   KYGKEID+WSAG++LY LLSG  PFWAE+  G   +I+   IDF+SDPWP I
Sbjct: 241 APEVLRR-KYGKEIDVWSAGVMLYILLSGVPPFWAETEKGIFDSILQGHIDFESDPWPHI 299

Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKL 305
           S SAKDL++RML +DP N+IT AQ+L+HPW+  E GEA D+PID+A+ +R+KQFRAM+KL
Sbjct: 300 SPSAKDLVKRMLTQDPANRITSAQVLEHPWMR-EGGEASDKPIDSAVFTRLKQFRAMNKL 358

Query: 306 KKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYM 365
           KKLALKVI ENL  EEIQ  K  F  MDT+ SGT+TY E K+GL++LGSTL+E +VKQ M
Sbjct: 359 KKLALKVIAENLSEEEIQGLKAMFTNMDTDKSGTITYAELKSGLARLGSTLSEAEVKQLM 418

Query: 366 QAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADEL 416
           +AAD+DGNGT         T++   ++ ++   K F  F K +        S YIT DEL
Sbjct: 419 EAADVDGNGTIDYIEFITATMHRYKLEKEEHLYKAFQHFDKDN--------SGYITRDEL 470

Query: 417 EAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
           +AA K+Y MGD+ TI+EI+ EVD D DGRI+Y+EFC+ M++GT
Sbjct: 471 KAAMKDYGMGDEETIREIISEVDADNDGRINYDEFCSMMRSGT 513

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727903|ref|NP_001235641.1| calmodulin-like domain protein kinase isoenzyme gamma [Glycine max] gi|2501766|gb|AAB80693.1| calmodulin-like domain protein kinase isoenzyme gamma [Glycine max]

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 257/480 (53%), Positives = 323/480 (67%), Gaps = 61/480 (12%)

Query: 37  DTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYL 93
           DTILGK +ED+K   T+ +EL RG+ G  YLCTENSTGLQ+ACKSISK    SKSD+  +
Sbjct: 70  DTILGKQFEDVKQFHTLGKELGRGQFGVTYLCTENSTGLQYACKSISKRKLASKSDKEDI 129

Query: 94  KRE-----H--------------------------CDGGTLVDRISDRERYTERAAASVF 122
           KRE     H                          C GG L DRI  +  Y+E+AAAS+ 
Sbjct: 130 KREIQIMQHLSGQPNIVEFKGAYEDRSSVHVVMELCAGGELFDRIIAKGHYSEKAAASIC 189

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           R +VN +H CH  G+MHRDLKPENF+ ++ DENA LKATDFGL+ F EEGKVY ++VG+ 
Sbjct: 190 RQIVNVVHICHFMGVMHRDLKPENFLLSSRDENALLKATDFGLSVFIEEGKVYRDIVGSA 249

Query: 183 LYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
            Y+APE+L   + GKEIDIWSAG+ILY LLSG  PFWAE+  G   AI+   IDF+S PW
Sbjct: 250 YYVAPEVLRR-RCGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILEGHIDFESQPW 308

Query: 243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAM 302
           P IS SAKDL+R+MLI+DP  +IT AQ+L+HPW+  ++G A D+PID+A++SR+KQFRAM
Sbjct: 309 PNISDSAKDLVRKMLIQDPKKRITSAQVLEHPWI--KDGNASDKPIDSAVLSRMKQFRAM 366

Query: 303 SKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVK 362
           +KLKKLALKVI EN+ AEEIQ  K  F  MDT+ SGT+TY+E K+GL +LGS LTE +VK
Sbjct: 367 NKLKKLALKVIAENMSAEEIQGLKAMFTNMDTDKSGTITYEELKSGLHRLGSKLTEAEVK 426

Query: 363 QYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITA 413
           Q M+AAD+DGNG+         T++   ++  D   K F  F K +        S +IT 
Sbjct: 427 QLMEAADVDGNGSIDYIEFITATMHRHKLERDDQLFKAFQYFDKDN--------SGFITR 478

Query: 414 DELEAAFKEYNMGDDATIKE-------IMFEVDRDKDGRISYEEFCATMKTGTHLRGTSY 466
           DELE+A KEY MGDDATIKE       I+ EVD D DGRI+YEEF A MK+G   +G  +
Sbjct: 479 DELESAMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFSAMMKSGNQQQGKLF 538

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15223629|ref|NP_175485.1| calcium-dependent protein kinase 33 [Arabidopsis thaliana] gi|75333437|sp|Q9C6P3.1|CDPKX_ARATH RecName: Full=Calcium-dependent protein kinase 33 gi|12322336|gb|AAG51192.1|AC079279_13 calcium-dependent protein kinase [Arabidopsis thaliana] gi|46931348|gb|AAT06478.1| At1g50700 [Arabidopsis thaliana] gi|51969388|dbj|BAD43386.1| hypothetical protein [Arabidopsis thaliana] gi|332194460|gb|AEE32581.1| calcium-dependent protein kinase 33 [Arabidopsis thaliana]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/465 (53%), Positives = 319/465 (68%), Gaps = 53/465 (11%)

Query: 38  TILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLK 94
            IL K YED+KL +T+++EL RG+ G  YLCTE STG +FACKSISK    +K D+  ++
Sbjct: 60  AILEKPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDMR 119

Query: 95  RE-----H--------------------------CDGGTLVDRISDRERYTERAAASVFR 123
           RE     H                          C GG L DRI  +  Y+ERAAASV R
Sbjct: 120 REIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRILAKGHYSERAAASVCR 179

Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL 183
            +VN ++ CH  G+MHRDLKPENF+ ++ DE A +KATDFGL+ F EEG+VY+++VG+  
Sbjct: 180 QIVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGRVYKDIVGSAY 239

Query: 184 YMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP 243
           Y+APE+L   +YGKEIDIWSAG+ILY LLSG  PFWAE+  G   AI+  EIDF+S PWP
Sbjct: 240 YVAPEVL-KRRYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPWP 298

Query: 244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMS 303
           +IS+SAKDL+RRML +DP  +I+ A++LKHPWL  E GEA D+PID+A++SR+KQFRAM+
Sbjct: 299 SISNSAKDLVRRMLTQDPKRRISAAEVLKHPWLR-EGGEASDKPIDSAVLSRMKQFRAMN 357

Query: 304 KLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQ 363
           KLKKLALKVI EN+  EEIQ  K  F  +DT++SGT+TY+E K GL+KLGS LTE +VKQ
Sbjct: 358 KLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSRLTEAEVKQ 417

Query: 364 YMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITAD 414
            M AAD+DGNG+         T++   ++  +   K F  F K          S YIT D
Sbjct: 418 LMDAADVDGNGSIDYIEFITATMHRHRLESNENVYKAFQHFDKDG--------SGYITTD 469

Query: 415 ELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
           ELEAA KEY MGDDATIKEI+ +VD D DGRI+Y+EFCA M++G 
Sbjct: 470 ELEAALKEYGMGDDATIKEILSDVDADNDGRINYDEFCAMMRSGN 514

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231140|ref|NP_188676.1| calmodulin-domain protein kinase 9 [Arabidopsis thaliana] gi|75319414|sp|Q38868.1|CDPK9_ARATH RecName: Full=Calcium-dependent protein kinase 9; AltName: Full=Calmodulin-domain protein kinase CDPK isoform 9 gi|1399265|gb|AAB03242.1| calmodulin-domain protein kinase CDPK isoform 9 [Arabidopsis thaliana] gi|9294561|dbj|BAB02824.1| calmodulin-domain protein kinase CDPK isoform 9 [Arabidopsis thaliana] gi|21539465|gb|AAM53285.1| calmodulin-domain protein kinase CDPK isoform 9 [Arabidopsis thaliana] gi|31711962|gb|AAP68337.1| At3g20410 [Arabidopsis thaliana] gi|332642854|gb|AEE76375.1| calmodulin-domain protein kinase 9 [Arabidopsis thaliana]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/465 (53%), Positives = 318/465 (68%), Gaps = 53/465 (11%)

Query: 37  DTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYL 93
           ++IL  A+ED+KL +T+ +EL RG+ G  YLCTENSTG ++ACKSISK    +K+D+  +
Sbjct: 77  NSILENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTKADKDDM 136

Query: 94  KRE-----H--------------------------CDGGTLVDRISDRERYTERAAASVF 122
           +RE     H                          C GG L DRI  +  YTERAAASV 
Sbjct: 137 RREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYTERAAASVC 196

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           R +VN +  CH  G++HRDLKPENF+ ++ DE A +KATDFGL+ F EEGKVY ++VG+ 
Sbjct: 197 RQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGKVYRDIVGSA 256

Query: 183 LYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
            Y+APE+L   +YGKE+DIWSAG+ILY LLSG  PFWAE+  G   AI+   IDF+S PW
Sbjct: 257 YYVAPEVLRR-RYGKEVDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGHIDFESQPW 315

Query: 243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAM 302
           P+ISSSAKDL+RRML  DP  +I+ A +L+HPWL  E GEA D+PID+A++SR+KQFRAM
Sbjct: 316 PSISSSAKDLVRRMLTADPKRRISAADVLQHPWLR-EGGEASDKPIDSAVLSRMKQFRAM 374

Query: 303 SKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVK 362
           +KLKKLALKVI EN+  EEIQ  K  F  +DT++SGT+TY+E K GL+KLGS LTE +VK
Sbjct: 375 NKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVK 434

Query: 363 QYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITA 413
           Q M AAD+DGNG+         T++   ++  +   K F  F K S        S YIT 
Sbjct: 435 QLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDS--------SGYITI 486

Query: 414 DELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTG 458
           DELE+A KEY MGDDATIKE++ +VD D DGRI+YEEFCA M++G
Sbjct: 487 DELESALKEYGMGDDATIKEVLSDVDSDNDGRINYEEFCAMMRSG 531

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569794|ref|XP_003553081.1| PREDICTED: calcium-dependent protein kinase 9-like [Glycine max]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 255/480 (53%), Positives = 322/480 (67%), Gaps = 61/480 (12%)

Query: 37  DTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYL 93
           DTILGK +ED+K  +T+ +EL RG+ G  YLCTENSTGLQ+ACKSISK     KSD+  +
Sbjct: 83  DTILGKQFEDVKQFYTLGKELGRGQFGVTYLCTENSTGLQYACKSISKRKLVKKSDKEDI 142

Query: 94  KRE-----H--------------------------CDGGTLVDRISDRERYTERAAASVF 122
           KRE     H                          C GG L DRI  +  Y+ERAAAS+ 
Sbjct: 143 KREIQIMQHLSGQPNIVEFKGAYEDRNSVHVVMELCAGGELFDRIIAKGHYSERAAASIC 202

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           R +VN +H CH  G+MHRDLKPENF+ ++ DE+A LKATDFGL+ F EEGK+Y ++VG+ 
Sbjct: 203 RQIVNVVHICHFMGVMHRDLKPENFLLSSRDESALLKATDFGLSVFIEEGKLYRDIVGSA 262

Query: 183 LYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
            Y+APE+L   + GKEIDIWSAG+ILY LLSG  PFWAE+  G   AI+   IDF+S PW
Sbjct: 263 YYVAPEVLRR-RCGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILEGHIDFESQPW 321

Query: 243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAM 302
           P IS++AKDL+R+MLI+DP  +IT AQ+L+HPW+  ++G A DRPID+A++SR+KQFRAM
Sbjct: 322 PNISNNAKDLVRKMLIQDPKKRITSAQVLEHPWI--KDGNASDRPIDSAVLSRMKQFRAM 379

Query: 303 SKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVK 362
           +KLKKLALKVI EN+ AEEIQ  K  F  MDT+ SG +TY+E KAGL +LGS LTE +VK
Sbjct: 380 NKLKKLALKVIAENMSAEEIQGLKAMFTNMDTDKSGAITYEELKAGLHRLGSKLTEAEVK 439

Query: 363 QYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITA 413
           Q M+AAD+DGNG+         T++   ++  D   K F  F K +        S +IT 
Sbjct: 440 QLMEAADVDGNGSIDYIEFITATMHRHKLERDDQLFKAFQYFDKDN--------SGFITR 491

Query: 414 DELEAAFKEYNMGDDATIKE-------IMFEVDRDKDGRISYEEFCATMKTGTHLRGTSY 466
           DELE A KEY MGDDATIKE       I+ EVD D DGRI+YEEF A MK+G   +G  +
Sbjct: 492 DELETAMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFSAMMKSGNQQQGKLF 551

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553567|ref|XP_003545126.1| PREDICTED: calcium-dependent protein kinase 9-like [Glycine max]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/482 (51%), Positives = 321/482 (66%), Gaps = 60/482 (12%)

Query: 25  HVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK 84
           HVH       + DTI GK +ED+K H+T+ +EL RG+ G  YLCTENSTGLQ+ACKSIS+
Sbjct: 72  HVH-------NHDTITGKPFEDVKQHYTLGKELGRGQFGVTYLCTENSTGLQYACKSISR 124

Query: 85  ---TSKSDEGYLKRE--------------------------H-----CDGGTLVDRISDR 110
               S++D+  +KRE                          H     C GG L DRI  +
Sbjct: 125 RKLVSRADKEDMKREIQIMQHLSGQSNIVEFKGAFEDKQSVHVVMELCAGGELFDRIIAK 184

Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
             Y+ERAAAS+ R +V  ++ CH  G++HRDLKPENF+ ++ D+   LKATDFGL+ F E
Sbjct: 185 GHYSERAAASICRQIVKVVNTCHFMGVIHRDLKPENFLLSSKDDKGLLKATDFGLSVFIE 244

Query: 171 EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI 230
           EGKVY  +VG+  Y+APE+L    YGKE DIWSAG+ILY LLSG  PFWAE+  G   AI
Sbjct: 245 EGKVYRNIVGSAYYVAPEVLRRS-YGKEADIWSAGVILYILLSGVPPFWAETEKGIFDAI 303

Query: 231 MSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDT 290
           +   IDF+S PWP+IS+SAKDL+R+MLI+DP  +IT +Q+L+HPWL  E G A D+PID+
Sbjct: 304 LQGHIDFESSPWPSISNSAKDLVRKMLIKDPKKRITASQVLEHPWLK-EGGNASDKPIDS 362

Query: 291 AIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLS 350
           A++SR+KQFRAM+KLKKLALKVI ENL  EEIQ  K  F  +DT++SGT+TY+E +AGL 
Sbjct: 363 AVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKAMFTNIDTDNSGTITYEELRAGLQ 422

Query: 351 KLGSTLTEVDVKQYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNI 401
           +LGS LTE +V+Q M AAD+DGNGT         T++   ++  +   K F  F K    
Sbjct: 423 RLGSKLTETEVRQLMDAADVDGNGTIDYIEFITATMHRHRLERDEHLYKAFQYFDKDG-- 480

Query: 402 LIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHL 461
                 S YIT DELE A KEY MGD+ATI+EI+ EVD D DGRI+YEEFC  M++GT  
Sbjct: 481 ------SGYITRDELEIAMKEYGMGDEATIREIISEVDTDNDGRINYEEFCTMMRSGTQQ 534

Query: 462 RG 463
           +G
Sbjct: 535 QG 536

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297847416|ref|XP_002891589.1| calcium-dependent protein kinase 33 [Arabidopsis lyrata subsp. lyrata] gi|297337431|gb|EFH67848.1| calcium-dependent protein kinase 33 [Arabidopsis lyrata subsp. lyrata]

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 248/465 (53%), Positives = 319/465 (68%), Gaps = 53/465 (11%)

Query: 38  TILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLK 94
            IL K YED+KL +T+++EL RG+ G  YLCTE ST  +FACKSISK    +K+D+  ++
Sbjct: 60  AILEKPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTRKRFACKSISKKKLVTKADKEDMR 119

Query: 95  RE-----H--------------------------CDGGTLVDRISDRERYTERAAASVFR 123
           RE     H                          C GG L DRI  +  Y+ERAAASV R
Sbjct: 120 REIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRILAKGHYSERAAASVCR 179

Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL 183
            +VN ++ CH  G+MHRDLKPENF+ ++ DE A +KATDFGL+ F EEG+VY+++VG+  
Sbjct: 180 QIVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGRVYKDIVGSAY 239

Query: 184 YMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP 243
           Y+APE+L   +YGKEIDIWSAG+ILY LLSG  PFWAE+  G   AI+  EIDF+S PWP
Sbjct: 240 YVAPEVL-KRRYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPWP 298

Query: 244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMS 303
           +IS+SAKDL+RRML +DP  +I+ A++L+HPWL  E GEA D+PID+A++SR+KQFRAM+
Sbjct: 299 SISNSAKDLVRRMLTQDPKRRISAAEVLQHPWLR-EGGEASDKPIDSAVLSRMKQFRAMN 357

Query: 304 KLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQ 363
           KLKKLALKVI EN+  EEIQ  K  F  +DT++SGT+TY+E K GL+KLGS LTE +VKQ
Sbjct: 358 KLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVKQ 417

Query: 364 YMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITAD 414
            M AAD+DGNG+         T++   ++  +   + F  F K          S YIT D
Sbjct: 418 LMDAADVDGNGSIDYIEFITATMHRHRLESNENLYRAFQHFDKDG--------SGYITID 469

Query: 415 ELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
           ELEAA KEY MGDDATIKEI+ +VD D DGRI+YEEFCA M++G 
Sbjct: 470 ELEAALKEYGMGDDATIKEILSDVDADNDGRINYEEFCAMMRSGN 514

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830722|ref|XP_002883243.1| calmodulin-domain protein kinase 9 [Arabidopsis lyrata subsp. lyrata] gi|297329083|gb|EFH59502.1| calmodulin-domain protein kinase 9 [Arabidopsis lyrata subsp. lyrata]

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/466 (52%), Positives = 318/466 (68%), Gaps = 53/466 (11%)

Query: 37  DTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYL 93
           ++IL  A+ED+KL +T+ +EL RG+ G  YLCTENSTG ++ACKSISK    +K+D+  +
Sbjct: 77  NSILENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTKADKDDM 136

Query: 94  KRE-----H--------------------------CDGGTLVDRISDRERYTERAAASVF 122
           +RE     H                          C GG L DRI  +  Y+ERAAASV 
Sbjct: 137 RREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYSERAAASVC 196

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           R +VN +  CH  G++HRDLKPENF+ ++ DE A +KATDFGL+ F EEGKVY ++VG+ 
Sbjct: 197 RQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGKVYRDIVGSA 256

Query: 183 LYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
            Y+APE+L   +YGKE+DIWSAG+ILY LLSG  PFWAE+  G   AI+   IDF+S PW
Sbjct: 257 YYVAPEVLRR-RYGKEVDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGHIDFESQPW 315

Query: 243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAM 302
           P+IS+SAKDL+RRML  DP  +I+ A +L+HPWL  E GEA D+PID+A++SR+KQFRAM
Sbjct: 316 PSISNSAKDLVRRMLTADPKRRISAADVLQHPWLR-EGGEASDKPIDSAVLSRMKQFRAM 374

Query: 303 SKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVK 362
           +KLKKLALKVI EN+  EEIQ  K  F  +DT++SG++TY+E K GL+KLGS LTE +VK
Sbjct: 375 NKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGSITYEELKEGLAKLGSKLTEAEVK 434

Query: 363 QYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITA 413
           Q M AAD+DGNG+         T++   ++  +   K F  F K S        S YIT 
Sbjct: 435 QLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDS--------SGYITI 486

Query: 414 DELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
           DELE+A KEY MGDDATIKE++ +VD D DGRI+YEEFCA M++G 
Sbjct: 487 DELESALKEYGMGDDATIKEVLSDVDSDNDGRINYEEFCAMMRSGN 532

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	483
TAIR|locus:2015846	521	CPK33 "calcium-dependent prote	0.737	0.683	0.578	3.1e-125
TAIR|locus:2092399	541	CPK9 "calmodulin-domain protei	0.737	0.658	0.576	1.7e-124
TAIR|locus:2138897	531	CPK21 "calcium-dependent prote	0.751	0.683	0.552	4.2e-117
TAIR|locus:2036783	551	CPK19 "calcium-dependent prote	0.737	0.646	0.539	2.3e-112
TAIR|locus:2204340	561	CPK29 "calcium-dependent prote	0.753	0.648	0.515	5e-108
TAIR|locus:2150225	523	CPK34 "AT5G19360" [Arabidopsis	0.739	0.682	0.505	1e-107
TAIR|locus:2128409	529	CDPK6 "calcium-dependent prote	0.730	0.667	0.513	3.1e-106
TAIR|locus:2177023	528	CPK17 "calcium-dependent prote	0.739	0.676	0.497	5.8e-105
TAIR|locus:2075885	646	CPK2 "calmodulin-domain protei	0.747	0.558	0.480	2.8e-101
TAIR|locus:2175503	610	CPK1 "calcium dependent protei	0.768	0.608	0.468	1.8e-99

TAIR|locus:2015846 CPK33 "calcium-dependent protein kinase 33" [Arabidopsis thaliana (taxid:3702)]

 Score = 1087 (387.7 bits), Expect = 3.1e-125, Sum P(2) = 3.1e-125
 Identities = 217/375 (57%), Positives = 275/375 (73%)

Query:    93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD 152
             L  E C GG L DRI  +  Y+ERAAASV R +VN ++ CH  G+MHRDLKPENF+ ++ 
Sbjct:   149 LVMELCAGGELFDRILAKGHYSERAAASVCRQIVNVVNICHFMGVMHRDLKPENFLLSSK 208

Query:   153 DENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLL 212
             DE A +KATDFGL+ F EEG+VY+++VG+  Y+APE+L   +YGKEIDIWSAG+ILY LL
Sbjct:   209 DEKALIKATDFGLSVFIEEGRVYKDIVGSAYYVAPEVLKR-RYGKEIDIWSAGIILYILL 267

Query:   213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
             SG  PFWAE+  G   AI+  EIDF+S PWP+IS+SAKDL+RRML +DP  +I+ A++LK
Sbjct:   268 SGVPPFWAETEKGIFDAILEGEIDFESQPWPSISNSAKDLVRRMLTQDPKRRISAAEVLK 327

Query:   273 HPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQM 332
             HPWL  E GEA D+PID+A++SR+KQFRAM+KLKKLALKVI EN+  EEIQ  K  F  +
Sbjct:   328 HPWLR-EGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANI 386

Query:   333 DTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT---------TLNLSLVQ 383
             DT++SGT+TY+E K GL+KLGS LTE +VKQ M AAD+DGNG+         T++   ++
Sbjct:   387 DTDNSGTITYEELKEGLAKLGSRLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLE 446

Query:   384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKD 443
               +   K F  F K          S YIT DELEAA KEY MGDDATIKEI+ +VD D D
Sbjct:   447 SNENVYKAFQHFDKDG--------SGYITTDELEAALKEYGMGDDATIKEILSDVDADND 498

Query:   444 GRISYEEFCATMKTG 458
             GRI+Y+EFCA M++G
Sbjct:   499 GRINYDEFCAMMRSG 513

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2092399 CPK9 "calmodulin-domain protein kinase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 1079 (384.9 bits), Expect = 1.7e-124, Sum P(2) = 1.7e-124
 Identities = 216/375 (57%), Positives = 271/375 (72%)

Query:    93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD 152
             L  E C GG L DRI  +  YTERAAASV R +VN +  CH  G++HRDLKPENF+ ++ 
Sbjct:   167 LVMELCAGGELFDRIIAKGHYTERAAASVCRQIVNVVKICHFMGVLHRDLKPENFLLSSK 226

Query:   153 DENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLL 212
             DE A +KATDFGL+ F EEGKVY ++VG+  Y+APE+L   +YGKE+DIWSAG+ILY LL
Sbjct:   227 DEKALIKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR-RYGKEVDIWSAGIILYILL 285

Query:   213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
             SG  PFWAE+  G   AI+   IDF+S PWP+ISSSAKDL+RRML  DP  +I+ A +L+
Sbjct:   286 SGVPPFWAETEKGIFDAILEGHIDFESQPWPSISSSAKDLVRRMLTADPKRRISAADVLQ 345

Query:   273 HPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQM 332
             HPWL  E GEA D+PID+A++SR+KQFRAM+KLKKLALKVI EN+  EEIQ  K  F  +
Sbjct:   346 HPWLR-EGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANI 404

Query:   333 DTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT---------TLNLSLVQ 383
             DT++SGT+TY+E K GL+KLGS LTE +VKQ M AAD+DGNG+         T++   ++
Sbjct:   405 DTDNSGTITYEELKEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLE 464

Query:   384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKD 443
               +   K F  F K S        S YIT DELE+A KEY MGDDATIKE++ +VD D D
Sbjct:   465 SNENLYKAFQHFDKDS--------SGYITIDELESALKEYGMGDDATIKEVLSDVDSDND 516

Query:   444 GRISYEEFCATMKTG 458
             GRI+YEEFCA M++G
Sbjct:   517 GRINYEEFCAMMRSG 531

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0007165 "signal transduction" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2138897 CPK21 "calcium-dependent protein kinase 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 1037 (370.1 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
 Identities = 205/371 (55%), Positives = 271/371 (73%)

Query:    92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
             +L  E C GG L DRI  +  Y+ERAAA + RS+VN +  CH  G++HRDLKPENF+ ++
Sbjct:   155 HLVMELCAGGELFDRIIAQGHYSERAAAGIIRSIVNVVQICHFMGVVHRDLKPENFLLSS 214

Query:   152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
              +ENA LKATDFGL+ F EEGKVY ++VG+  Y+APE+L    YGKEIDIWSAG+ILY L
Sbjct:   215 KEENAMLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR-SYGKEIDIWSAGVILYIL 273

Query:   212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
             LSG  PFWAE+  G    ++  EIDF S+PWP+IS SAKDL+R+ML +DP  +IT AQ+L
Sbjct:   274 LSGVPPFWAENEKGIFDEVIKGEIDFVSEPWPSISESAKDLVRKMLTKDPKRRITAAQVL 333

Query:   272 KHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQ 331
             +HPW+  + GEA D+PID+A++SR+KQFRAM+KLKKLALKVI E+L  EEI+  K  F  
Sbjct:   334 EHPWI--KGGEAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLKTMFAN 391

Query:   332 MDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLK- 390
             +DT+ SGT+TY+E K GL++LGS L+E +VKQ M+AAD+DGNGT      +       K 
Sbjct:   392 IDTDKSGTITYEELKTGLTRLGSRLSETEVKQLMEAADVDGNGTIDYYEFISATMHRYKL 451

Query:   391 --DFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISY 448
               D +++ K      +   S +IT DELE+A KEY MGD+A+IKE++ EVD D DGRI++
Sbjct:   452 DRDEHVY-KAFQHFDKDN-SGHITRDELESAMKEYGMGDEASIKEVISEVDTDNDGRINF 509

Query:   449 EEFCATMKTGT 459
             EEFCA M++G+
Sbjct:   510 EEFCAMMRSGS 520

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0019903 "protein phosphatase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2036783 CPK19 "calcium-dependent protein kinase 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 1001 (357.4 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
 Identities = 203/376 (53%), Positives = 262/376 (69%)

Query:    92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
             +L  E C+GG L D+I+ R  Y+E+AAA + RSVV  +  CH  G++HRDLKPENF+ ++
Sbjct:   173 HLVMELCEGGELFDKITKRGHYSEKAAAEIIRSVVKVVQICHFMGVIHRDLKPENFLLSS 232

Query:   152 DDE-NATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
              DE ++ LKATDFG++ F EEGKVYE++VG+  Y+APE+L    YGK IDIWSAG+ILY 
Sbjct:   233 KDEASSMLKATDFGVSVFIEEGKVYEDIVGSAYYVAPEVLKR-NYGKAIDIWSAGVILYI 291

Query:   211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
             LL G  PFWAE+  G    I+  EIDF+S+PWP+IS SAKDL+R ML  DP  + T AQ+
Sbjct:   292 LLCGNPPFWAETDKGIFEEILRGEIDFESEPWPSISESAKDLVRNMLKYDPKKRFTAAQV 351

Query:   271 LKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFK 330
             L+HPW+  E GEA D+PID+A++SR+KQ RAM+KLKKLA K I +NL  EE++  K  F 
Sbjct:   352 LEHPWIR-EGGEASDKPIDSAVLSRMKQLRAMNKLKKLAFKFIAQNLKEEELKGLKTMFA 410

Query:   331 QMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT---------TLNLSL 381
              MDT+ SGT+TYDE K+GL KLGS LTE +VKQ ++ AD+DGNGT         T+N   
Sbjct:   411 NMDTDKSGTITYDELKSGLEKLGSRLTETEVKQLLEDADVDGNGTIDYIEFISATMNRFR 470

Query:   382 VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRD 441
             V+ +D   K F  F K +        S +I+  ELE A KEYNMGDD  IKEI+ EVD D
Sbjct:   471 VEREDNLFKAFQHFDKDN--------SGFISRQELETAMKEYNMGDDIMIKEIISEVDAD 522

Query:   442 KDGRISYEEFCATMKT 457
              DG I+Y+EFC  MK+
Sbjct:   523 NDGSINYQEFCNMMKS 538

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2204340 CPK29 "calcium-dependent protein kinase 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 988 (352.9 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
 Identities = 194/376 (51%), Positives = 266/376 (70%)

Query:    89 DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
             D  +L  E C GG L DRI  +  Y+E+ AA++FR +VN +H CH  G++HRDLKPENF+
Sbjct:   184 DNLHLVMELCSGGELFDRIIKKGSYSEKEAANIFRQIVNVVHVCHFMGVVHRDLKPENFL 243

Query:   149 FTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
               +++E++ +KATDFGL+ F EEGKVY ++VG+  Y+APE+L    YGKEID+WSAG++L
Sbjct:   244 LVSNEEDSPIKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLHR-NYGKEIDVWSAGVML 302

Query:   209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVA 268
             Y LLSG  PFW E+      AI+  ++D ++ PWPTIS SAKDLIR+MLIRDP  +IT A
Sbjct:   303 YILLSGVPPFWGETEKTIFEAILEGKLDLETSPWPTISESAKDLIRKMLIRDPKKRITAA 362

Query:   269 QILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKET 328
             + L+HPW+   + +  D+PI++A++ R+KQFRAM+KLKKLALKVI ENL  EEI+  K+T
Sbjct:   363 EALEHPWMT--DTKISDKPINSAVLVRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKQT 420

Query:   329 FKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTS 388
             FK MDT++SGT+T+DE + GL +LGS LTE ++KQ M+AAD+D +GT   +  V    T+
Sbjct:   421 FKNMDTDESGTITFDELRNGLHRLGSKLTESEIKQLMEAADVDKSGTIDYIEFV----TA 476

Query:   389 LKDFNIFTKPSNILIRIMI-----SIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKD 443
                 +   K  N++          S +IT DEL+ +  EY MGDDATI E++ +VD D D
Sbjct:   477 TMHRHRLEKEENLIEAFKYFDKDRSGFITRDELKHSMTEYGMGDDATIDEVINDVDTDND 536

Query:   444 GRISYEEFCATMKTGT 459
             GRI+YEEF A M+ GT
Sbjct:   537 GRINYEEFVAMMRKGT 552

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)]

 Score = 944 (337.4 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
 Identities = 190/376 (50%), Positives = 258/376 (68%)

Query:    92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
             +L  E C GG L DRI  +  Y+ERAAAS+ R++V  +H CHS G++HRDLKPENF+  +
Sbjct:   143 HLVMELCAGGELFDRIIAKGHYSERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLS 202

Query:   152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
              DEN+ LKATDFGL+ F++ G+V++++VG+  Y+APE+L   KYG E DIWS G++LY L
Sbjct:   203 KDENSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPEVLRR-KYGPEADIWSIGVMLYIL 261

Query:   212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
             L G  PFWAES  G   AI+S ++DF SDPWP IS  AKDL+R+ML  DP  ++T AQ+L
Sbjct:   262 LCGVPPFWAESENGIFNAILSGQVDFSSDPWPVISPQAKDLVRKMLNSDPKQRLTAAQVL 321

Query:   272 KHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQ 331
              HPW+  E+GEA D P+D A++SR+KQF+AM+  KK+AL+VI   L  EEI   KE FK 
Sbjct:   322 NHPWIK-EDGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKG 380

Query:   332 MDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT---------TLNLSLV 382
             MDT++SGT+T +E + GL+K G+ L+E +V+Q M+AAD DGNGT         T++++ +
Sbjct:   381 MDTDNSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRL 440

Query:   383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDK 442
               ++     F  F K +        S YIT +ELE A +E+ M D   IKEI+ EVD D 
Sbjct:   441 DREEHLYSAFQHFDKDN--------SGYITTEELEQALREFGMNDGRDIKEIISEVDGDN 492

Query:   443 DGRISYEEFCATMKTG 458
             DGRI+YEEF A M+ G
Sbjct:   493 DGRINYEEFVAMMRKG 508

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0004672 "protein kinase activity" evidence=IDA

TAIR|locus:2128409 CDPK6 "calcium-dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 982 (350.7 bits), Expect = 3.1e-106, Sum P(2) = 3.1e-106
 Identities = 191/372 (51%), Positives = 265/372 (71%)

Query:    96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
             E C+GG L DRI  +  Y+ERAAA + R +V  +H+CHS G+MHRDLKPENF+F + DEN
Sbjct:   157 ELCEGGELFDRIISKGLYSERAAADLCRQMVMVVHSCHSMGVMHRDLKPENFLFLSKDEN 216

Query:   156 ATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGA 215
             + LKATDFGL+ FF+ G  ++++VG+  Y+APE+L    YG E DIWSAG+ILY LLSG 
Sbjct:   217 SPLKATDFGLSVFFKPGDKFKDLVGSAYYVAPEVLKR-NYGPEADIWSAGVILYILLSGV 275

Query:   216 QPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
              PFW E+  G   AI+  ++DF +DPWP +S  AKDL+R+ML  DP +++T A++L HPW
Sbjct:   276 PPFWGENETGIFDAILQGQLDFSADPWPALSDGAKDLVRKMLKYDPKDRLTAAEVLNHPW 335

Query:   276 LNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTN 335
             +  E+GEA D+P+D A++SR+KQFRAM+KLKK+ALKVI ENL  EEI   KE FK +DT+
Sbjct:   336 IR-EDGEASDKPLDNAVLSRMKQFRAMNKLKKMALKVIAENLSEEEIIGLKEMFKSLDTD 394

Query:   336 DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT---------TLNLSLVQCKD 386
             ++G +T +E + GL KLGS ++E +++Q M+AAD+DG+G+         T++++ ++ +D
Sbjct:   395 NNGIVTLEELRTGLPKLGSKISEAEIRQLMEAADMDGDGSIDYLEFISATMHMNRIERED 454

Query:   387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRI 446
                  F  F   +        S YIT +ELE A K+YNMGDD +IKEI+ EVD D+DG+I
Sbjct:   455 HLYTAFQFFDNDN--------SGYITMEELELAMKKYNMGDDKSIKEIIAEVDTDRDGKI 506

Query:   447 SYEEFCATMKTG 458
             +YEEF A MK G
Sbjct:   507 NYEEFVAMMKKG 518

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

GO:0010119 "regulation of stomatal movement" evidence=IMP

GO:0010359 "regulation of anion channel activity" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0009651 "response to salt stress" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0032880 "regulation of protein localization" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0051049 "regulation of transport" evidence=RCA

TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 928 (331.7 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
 Identities = 187/376 (49%), Positives = 255/376 (67%)

Query:    92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
             +L  E C GG L DRI  +  Y+ERAAAS+ R++V  +H CHS G++HRDLKPENF+   
Sbjct:   148 HLVMELCAGGELFDRIIAKGHYSERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLN 207

Query:   152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
              DEN+ LKATDFGL+ F++ G+V++++VG+  Y+APE+L   KYG E DIWS G++LY L
Sbjct:   208 KDENSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPEVLKR-KYGPEADIWSIGVMLYIL 266

Query:   212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
             L G  PFWAES  G   AI+   +DF SDPWP+IS  AKDL+++ML  DP  ++T AQ+L
Sbjct:   267 LCGVPPFWAESENGIFNAILRGHVDFSSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVL 326

Query:   272 KHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQ 331
              HPW+  E+GEA D P+D A++SR+KQF+AM+  KK+AL+VI   L  EEI   KE FK 
Sbjct:   327 NHPWIK-EDGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKG 385

Query:   332 MDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT---------TLNLSLV 382
             MDT+ SGT+T +E + GL+K G+ L+E +V+Q M+AAD DGNGT         T++++ +
Sbjct:   386 MDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRL 445

Query:   383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDK 442
               ++     F  F K +        S YIT +ELE A +E+ M D   IKEI+ EVD D 
Sbjct:   446 DREEHLYSAFQHFDKDN--------SGYITMEELEQALREFGMNDGRDIKEIISEVDGDN 497

Query:   443 DGRISYEEFCATMKTG 458
             DGRI+Y+EF A M+ G
Sbjct:   498 DGRINYDEFVAMMRKG 513

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2075885 CPK2 "calmodulin-domain protein kinase cdpk isoform 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 924 (330.3 bits), Expect = 2.8e-101, Sum P(2) = 2.8e-101
 Identities = 183/381 (48%), Positives = 262/381 (68%)

Query:    92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
             +L  E C GG L DRI  R  YTER AA + R++V  L ACHS G+MHRDLKPENF+F +
Sbjct:   261 HLVMELCSGGELFDRIIQRGHYTERKAAELARTIVGVLEACHSLGVMHRDLKPENFLFVS 320

Query:   152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
              +E++ LK  DFGL+ FF+  +V+ +VVG+P Y+APE+L   +YG E D+WSAG+I+Y L
Sbjct:   321 REEDSLLKTIDFGLSMFFKPDEVFTDVVGSPYYVAPEVLRK-RYGPESDVWSAGVIVYIL 379

Query:   212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
             LSG  PFWAE+  G    ++  ++DF SDPWP+IS SAKDL+R+ML+RDP  ++T  Q+L
Sbjct:   380 LSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPKRRLTAHQVL 439

Query:   272 KHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQ 331
              HPW+  + G A D+P+D+A++SR+KQF AM+K KK+AL+VI E+L  EEI   K+ FK 
Sbjct:   440 CHPWVQID-GVAPDKPLDSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKQMFKM 498

Query:   332 MDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT---------TLNLSLV 382
             +D ++SG +T++E KAGL ++G+ L E ++   MQAAD+D +GT         TL+L+ +
Sbjct:   499 IDADNSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKI 558

Query:   383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDK 442
             + +D     F+ F K          S +IT DEL+ A +E+ + +DA I+E+M +VD+DK
Sbjct:   559 EREDHLFAAFSYFDKDE--------SGFITPDELQQACEEFGV-EDARIEEMMRDVDQDK 609

Query:   443 DGRISYEEFCATMKTGTHLRG 463
             DGRI Y EF A M+ G+ + G
Sbjct:   610 DGRIDYNEFVAMMQKGSIMGG 630

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;NAS

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

TAIR|locus:2175503 CPK1 "calcium dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 905 (323.6 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
 Identities = 183/391 (46%), Positives = 256/391 (65%)

Query:    92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
             +L  E C GG L DRI  R  YTER AA + R++V  + ACHS G+MHRDLKPENF+F +
Sbjct:   225 HLVMECCAGGELFDRIIQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVS 284

Query:   152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
               E++ LK  DFGL+ FF+   V+ +VVG+P Y+APE+L   +YG E D+WSAG+I+Y L
Sbjct:   285 KHEDSLLKTIDFGLSMFFKPDDVFTDVVGSPYYVAPEVLRK-RYGPEADVWSAGVIVYIL 343

Query:   212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
             LSG  PFWAE+  G    ++  ++DF SDPWP+IS SAKDL+R+ML+RDP  ++T  Q+L
Sbjct:   344 LSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPKKRLTAHQVL 403

Query:   272 KHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQ 331
              HPW+  + G A D+P+D+A++SR+KQF AM+K KK+AL+VI E+L  EEI   KE F  
Sbjct:   404 CHPWVQVD-GVAPDKPLDSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNM 462

Query:   332 MDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT---------TLNLSLV 382
             +D + SG +T++E KAGL ++G+ L E ++   MQAAD+D +GT         TL+L+ +
Sbjct:   463 IDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKI 522

Query:   383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDK 442
             + +D     F  F K          S YIT DEL+ A +E+ + +D  I+E+M +VD+D 
Sbjct:   523 EREDHLFAAFTYFDKDG--------SGYITPDELQQACEEFGV-EDVRIEELMRDVDQDN 573

Query:   443 DGRISYEEFCATMKTGTHLRGTSYRNLSHIF 473
             DGRI Y EF A M+ G+   G     L   F
Sbjct:   574 DGRIDYNEFVAMMQKGSITGGPVKMGLEKSF 604

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=NAS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P53683	CDPK2_ORYSJ	2, ., 7, ., 1, 1, ., 1	0.5182	0.8509	0.7711	yes	no
P49101	CDPK2_MAIZE	2, ., 7, ., 1, 1, ., 1	0.5225	0.8530	0.8031	N/A	no
Q9C6P3	CDPKX_ARATH	2, ., 7, ., 1, 1, ., 1	0.5376	0.8530	0.7907	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.914
3rd Layer	2.7.11	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	CPK33	CPK33; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase; member of Calcium Dependent Protein Kinase ; May play a role in signal transduction pathways that involve calcium as a second messenger (521 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	CPK16	CPK16; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ protein kinase/ [...] (571 aa)			•			•	•	•	0.909
	CPK18	CPK18; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ protein kinase/ [...] (534 aa)			•			•	•	•	0.909
	AT5G24430	calcium-dependent protein kinase, putative / CDPK, putative; calcium-dependent protein kinase, [...] (594 aa)			•			•		•	0.905
	AT3G49370	calcium-dependent protein kinase, putative / CDPK, putative; calcium-dependent protein kinase, [...] (594 aa)			•			•		•	0.905
	CPK5	CPK5 (calmodulin-domain protein kinase 5); ATP binding / calcium ion binding / calmodulin-depen [...] (556 aa)			•			•	•	•	0.905
	CPK19	CPK19; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein [...] (551 aa)			•			•	•	•	0.905
	PEPKR2	PEPKR2 (Phosphoenolpyruvate carboxylase-related kinase 2); ATP binding / kinase/ protein kinase [...] (470 aa)			•			•		•	0.905
	CPK20	CPK20; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein [...] (583 aa)			•			•	•	•	0.905
	CRK2	calcium-dependent protein kinase, putative / CDPK, putative; calcium-dependent protein kinase, [...] (599 aa)			•			•		•	0.905
	At3g50530	CRK (CDPK-related kinase); ATP binding / calcium ion binding / calcium-dependent protein serine [...] (601 aa)			•			•		•	0.904

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	483
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-69
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-64
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-42
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-40
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-40
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-39
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-38
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-37
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-34
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-34
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-34
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	6e-33
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-32
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-32
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	5e-32
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	7e-32
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-31
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-30
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	3e-29
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	8e-29
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-29
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-28
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-28
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-28
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	5e-28
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	6e-28
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-27
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-27
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-27
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	7e-27
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	8e-27
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-26
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	7e-26
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	1e-25
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	3e-25
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	6e-25
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	6e-25
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	9e-25
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-24
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-24
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	3e-24
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	5e-24
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	6e-24
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	6e-24
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	8e-24
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	1e-23
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-23
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-23
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-23
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-23
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-23
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	4e-23
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	5e-23
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	8e-23
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-22
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-22
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-22
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	4e-22
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	5e-22
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	6e-22
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	8e-22
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	9e-22
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-21
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-21
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-21
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	4e-21
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	4e-21
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	7e-21
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	8e-21
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-20
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-20
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-20
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-20
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	3e-20
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	3e-20
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	3e-20
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	4e-20
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-20
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-19
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-19
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-19
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-19
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-19
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-19
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-19
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	2e-19
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-19
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	3e-19
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-19
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	4e-19
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	4e-19
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	4e-19
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	5e-19
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	7e-19
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	8e-19
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	8e-19
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	8e-19
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	8e-19
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-18
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-18
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-18
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-18
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-18
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	4e-18
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	5e-18
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	5e-18
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	6e-18
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	6e-18
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	7e-18
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	1e-17
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	1e-17
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-17
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	3e-17
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-17
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	3e-17
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	3e-17
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	4e-17
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	4e-17
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	5e-17
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	6e-17
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	6e-17
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	7e-17
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	7e-17
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	1e-16
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	1e-16
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-16
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-16
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-16
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	2e-16
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	3e-16
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	3e-16
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	3e-16
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-16
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	4e-16
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	5e-16
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	6e-16
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	8e-16
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	1e-15
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-15
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	1e-15
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-15
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-15
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	3e-15
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	3e-15
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	3e-15
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	5e-15
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	6e-15
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-14
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-14
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-14
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-14
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-14
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	2e-14
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-14
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-14
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	4e-14
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-14
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	4e-14
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-14
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	5e-14
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	6e-14
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	7e-14
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	7e-14
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	8e-14
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	9e-14
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	1e-13
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	1e-13
PTZ00184	149	PTZ00184, PTZ00184, calmodulin; Provisional	1e-13
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-13
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	2e-13
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-13
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	3e-13
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	3e-13
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-13
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	4e-13
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	5e-13
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	6e-13
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	7e-13
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	9e-13
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	1e-12
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-12
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	1e-12
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	2e-12
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-12
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-12
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-12
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-12
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	3e-12
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	4e-12
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	5e-12
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	7e-12
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	2e-11
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	3e-11
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	3e-11
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	4e-11
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	6e-11
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	7e-11
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	8e-11
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	8e-11
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	1e-10
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-10
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	2e-10
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	4e-10
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	7e-10
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	7e-10
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	1e-09
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	1e-09
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	1e-09
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	1e-09
COG5126	160	COG5126, FRQ1, Ca2+-binding protein (EF-Hand super	2e-09
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	6e-09
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	7e-09
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	8e-09
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	9e-09
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	1e-08
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-08
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	3e-08
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	4e-08
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-08
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	5e-08
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	6e-08
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	6e-08
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-07
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-07
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	4e-07
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	4e-07
PTZ00183	158	PTZ00183, PTZ00183, centrin; Provisional	4e-07
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-07
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	5e-07
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	1e-06
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-06
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	2e-06
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	2e-06
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-06
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	2e-06
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	4e-06
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	6e-06
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	8e-06
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-05
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-05
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-05
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	1e-05
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	2e-05
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-05
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	2e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-05
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-05
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-05
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	3e-05
smart00054	29	smart00054, EFh, EF-hand, calcium binding motif	3e-05
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-05
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-05
pfam00036	29	pfam00036, efhand, EF hand	6e-05
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	7e-05
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	7e-05
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	8e-05
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	8e-05
pfam13833	53	pfam13833, EF_hand_6, EF-hand domain pair	8e-05
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	1e-04
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-04
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	1e-04
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	1e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-04
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-04
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	2e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	3e-04
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	3e-04
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	3e-04
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	4e-04
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	4e-04
PRK14879	211	PRK14879, PRK14879, serine/threonine protein kinas	4e-04
TIGR03724	199	TIGR03724, arch_bud32, Kae1-associated kinase Bud3	4e-04
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	5e-04
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	5e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	5e-04
PRK09605	535	PRK09605, PRK09605, bifunctional UGMP family prote	5e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	8e-04
pfam13405	30	pfam13405, EF_hand_4, EF-hand domain	0.001
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	0.001
COG3642	204	COG3642, COG3642, Mn2+-dependent serine/threonine	0.001
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.002
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	0.003
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	0.003
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.003
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	0.003
pfam00036	29	pfam00036, efhand, EF hand	0.004
cd00213	88	cd00213, S-100, S-100: S-100 domain, which represe	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  222 bits (568), Expect = 1e-69
 Identities = 93/257 (36%), Positives = 128/257 (49%), Gaps = 34/257 (13%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS-KSDEGYLKRE------------- 96
           + I E+L  G  G++YL  +  TG   A K I K   K D   + RE             
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 97  -----------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
                            +C+GG L D +  R R +E  A    R +++AL   HS GI+H
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVH 120

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEI 199
           RDLKPEN +    DE+  +K  DFGLA   + G+     VGTP YMAPE+L    YGK +
Sbjct: 121 RDLKPENILL---DEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAV 177

Query: 200 DIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR 259
           DIWS G+ILY LL+G  PF  +     L   + +       P   IS  AKDLIR++L++
Sbjct: 178 DIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVK 237

Query: 260 DPNNQITVAQILKHPWL 276
           DP  ++T  + L+HP+ 
Sbjct: 238 DPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  207 bits (530), Expect = 5e-64
 Identities = 89/263 (33%), Positives = 127/263 (48%), Gaps = 40/263 (15%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE---------GYLKR------ 95
           + +  +L  G  G +Y      TG   A K + K S+  +           L+R      
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 96  -----------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIM 138
                            E+C+GG L D +S     +E  A  +   ++  L   HSNGI+
Sbjct: 61  VRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGII 120

Query: 139 HRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPE-LLGPCKYG 196
           HRDLKPEN +    DEN  +K  DFGLA    +        VGTP YMAPE LLG   YG
Sbjct: 121 HRDLKPENILL---DENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYG 177

Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYG---TLTAIMSREIDFKSDPWPTISSSAKDLI 253
            ++D+WS G+ILY LL+G  PF  E++      +  I+   ++F    W + S  AKDLI
Sbjct: 178 PKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLI 237

Query: 254 RRMLIRDPNNQITVAQILKHPWL 276
           ++ L +DP+ + T  +IL+HPW 
Sbjct: 238 KKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  148 bits (377), Expect = 4e-42
 Identities = 78/252 (30%), Positives = 107/252 (42%), Gaps = 71/252 (28%)

Query: 57  LCRGESGRIYLCTENSTGLQFACKSISK-TSKSDEGYLKRE------------------- 96
           L  G  G +YL  +  TG + A K I K  S S    L RE                   
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 97  -----------HCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKP 144
                      +C+GG+L D + + E + +E     +   ++  L   HSNGI+HRDLKP
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKP 120

Query: 145 ENFIFTTDDENATLKATDFGLAFFFEEGKVYE-EVVGTPLYMAPELL-GPCKYGKEIDIW 202
           EN +   D +N  +K  DFGL+      K     +VGTP YMAPE+L G   Y ++ DIW
Sbjct: 121 ENILL--DSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIW 178

Query: 203 SAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN 262
           S G+ILY L                                      KDLIR+ML +DP 
Sbjct: 179 SLGVILYEL-----------------------------------PELKDLIRKMLQKDPE 203

Query: 263 NQITVAQILKHP 274
            + +  +IL+H 
Sbjct: 204 KRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  145 bits (368), Expect = 2e-40
 Identities = 73/257 (28%), Positives = 110/257 (42%), Gaps = 45/257 (17%)

Query: 59  RGESGRIYLCTENSTGLQFACKSISKTSKSDEGY---------LKR-------------- 95
           RG  G +YL  +  TG   A KS+  +  S+E           L                
Sbjct: 10  RGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSER 69

Query: 96  -----------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKP 144
                      E+  GG+L   +    +  E       R ++  L   HSNGI+HRD+K 
Sbjct: 70  DEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKG 129

Query: 145 ENFIFTTDDENATLKATDFGLAFFFEEGKVYEE---VVGTPLYMAPELLGPCKYGKEIDI 201
            N +  +D     +K  DFG A    + +  E    V GTP +MAPE++   +YG+  DI
Sbjct: 130 ANILVDSDGV---VKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADI 186

Query: 202 WSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW--PTISSSAKDLIRRMLIR 259
           WS G  +  + +G  P W+E   G   A + +       P     +S  AKD +R+ L R
Sbjct: 187 WSLGCTVIEMATGKPP-WSE--LGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRR 243

Query: 260 DPNNQITVAQILKHPWL 276
           DP  + T  ++L+HP+L
Sbjct: 244 DPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  144 bits (365), Expect = 5e-40
 Identities = 77/255 (30%), Positives = 112/255 (43%), Gaps = 46/255 (18%)

Query: 59  RGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------- 91
           +G  G++ L  +  TG  +A K + K                                  
Sbjct: 3   KGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF 62

Query: 92  ------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPE 145
                 YL  E+  GG L   +S   R++E  A      +V AL   HS GI++RDLKPE
Sbjct: 63  QTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPE 122

Query: 146 NFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWS 203
           N +    D +  +K TDFGLA     E  +      GTP Y+APE+L    YGK +D WS
Sbjct: 123 NILL---DADGHIKLTDFGLAKELSSEGSRTNT-FCGTPEYLAPEVLLGKGYGKAVDWWS 178

Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
            G++LY +L+G  PF+AE        I+   + F       +S  A+DLI  +L +DP  
Sbjct: 179 LGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEF----LSPEARDLISGLLQKDPTK 234

Query: 264 QIT---VAQILKHPW 275
           ++      +I  HP+
Sbjct: 235 RLGSGGAEEIKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  143 bits (362), Expect = 2e-39
 Identities = 75/270 (27%), Positives = 116/270 (42%), Gaps = 59/270 (21%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR-------------- 95
            + I +++ +G  G++YL    S G  +  K I   S   E   +               
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEID-LSNMSEKEREDALNEVKILKKLNHP 59

Query: 96  -------------------EHCDGGTLVDRISDRER----YTERAAASVFRSVVNALHAC 132
                              E+ DGG L  +I  +++    + E      F  +  AL   
Sbjct: 60  NIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYL 119

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE-------VVGTPLYM 185
           HS  I+HRD+KP+N IF T +    +K  DFG++      KV          VVGTP Y+
Sbjct: 120 HSRKILHRDIKPQN-IFLTSNGL--VKLGDFGIS------KVLSSTVDLAKTVVGTPYYL 170

Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           +PEL     Y  + DIWS G +LY L +   PF  E+L      I+  +      P P+ 
Sbjct: 171 SPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY----PPIPSQ 226

Query: 246 -SSSAKDLIRRMLIRDPNNQITVAQILKHP 274
            SS  ++L+  +L +DP  + ++AQIL+ P
Sbjct: 227 YSSELRNLVSSLLQKDPEERPSIAQILQSP 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  139 bits (353), Expect = 5e-38
 Identities = 73/284 (25%), Positives = 110/284 (38%), Gaps = 66/284 (23%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKRE----------- 96
           F   + +  G    + L  E  T  ++A K + K     +    Y+K E           
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62

Query: 97  --------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                               +   G L+  I       E+        ++ AL   HS G
Sbjct: 63  GIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG 122

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV------------------ 178
           I+HRDLKPEN +    D++  +K TDFG A   +     E                    
Sbjct: 123 IIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRF 179

Query: 179 ---VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI 235
              VGT  Y++PELL     GK  D+W+ G I+Y +L+G  PF   + Y T   I+  E 
Sbjct: 180 ASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEY 239

Query: 236 DFKSDPWPTISSSAKDLIRRMLIRDPNNQITV----AQILKHPW 275
            F     P     AKDLI ++L+ DP +++ V     ++  HP+
Sbjct: 240 SFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  138 bits (349), Expect = 2e-37
 Identities = 78/264 (29%), Positives = 116/264 (43%), Gaps = 50/264 (18%)

Query: 59  RGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------- 91
           +G  GR++L  + STG  +A K I K     +                            
Sbjct: 3   KGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF 62

Query: 92  ------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPE 145
                 YL  E+  GG L   + +     E  A      +V AL   HSNGI+HRDLKP+
Sbjct: 63  QGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPD 122

Query: 146 NFIFTTDDENATLKATDFGLAFFFEEGKVY---------EEVVGTPLYMAPELLGPCKYG 196
           N +    D N  LK TDFGL+      +           + +VGTP Y+APE++    + 
Sbjct: 123 NILI---DSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHS 179

Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM 256
           K +D WS G ILY  L G  PF  E+       I++ +I++  D    +S  A DLI ++
Sbjct: 180 KTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED--VEVSDEAIDLISKL 237

Query: 257 LIRDPNNQI---TVAQILKHPWLN 277
           L+ DP  ++   ++ +I  HP+  
Sbjct: 238 LVPDPEKRLGAKSIEEIKNHPFFK 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  130 bits (330), Expect = 1e-34
 Identities = 70/216 (32%), Positives = 100/216 (46%), Gaps = 34/216 (15%)

Query: 92  YLKREHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
            L  E+     L + + D ER   E    S  R ++  +   H+NGIMHRDLKP N + +
Sbjct: 75  VLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS 133

Query: 151 TDDENATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLI 207
            D     LK  DFGLA  F  EE ++Y   V T  Y APELL G  KY   +D+W+ G I
Sbjct: 134 ADG---VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCI 190

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMS-------------------REIDF---KSDPW--- 242
              LL+G+  F  E+    L  +                      +I F   K  P    
Sbjct: 191 FAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEI 250

Query: 243 -PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
            P  S  A DL++ +L+ DP+ +++ A+ L+HP+  
Sbjct: 251 FPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score =  129 bits (326), Expect = 2e-34
 Identities = 79/268 (29%), Positives = 111/268 (41%), Gaps = 46/268 (17%)

Query: 55  EELCRGESGRIYLCTENSTGLQFACKSISKTS---------------------------- 86
           + + +G  G +YL  + STG  FA K + K+                             
Sbjct: 2   KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAK 61

Query: 87  ------KSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHR 140
                   D  YL  E+ +GG     I       E  A      VV  +   H  GI+HR
Sbjct: 62  LYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR 121

Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEID 200
           D+KPEN +    D+   LK TDFGL+     G   ++ VGTP Y+APE +      K  D
Sbjct: 122 DIKPENLLI---DQTGHLKLTDFGLS---RNGLENKKFVGTPDYLAPETILGVGDDKMSD 175

Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
            WS G +++  L G  PF AE+       I+SR I++  +     S  A DLI R+L  D
Sbjct: 176 WWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD 235

Query: 261 PNNQI---TVAQILKHPWLNYENGEAWD 285
           P  ++      +I  HP+    N   WD
Sbjct: 236 PAKRLGANGYQEIKSHPFFKSIN---WD 260

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  128 bits (324), Expect = 4e-34
 Identities = 77/259 (29%), Positives = 114/259 (44%), Gaps = 39/259 (15%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------- 90
            F I E++ +G  G +Y      TG + A K I   SK  +                   
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIV 60

Query: 91  ----GYLKR-------EHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIM 138
                YLK+       E C GG+L D +    +  TE   A V + ++  L   HSNGI+
Sbjct: 61  KYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGII 120

Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           HRD+K  N + T+D E   +K  DFGL+    + K    +VGTP +MAPE++    Y  +
Sbjct: 121 HRDIKAANILLTSDGE---VKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYK 177

Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAI-MSREIDFKSDPWPTISS-SAKDLIRRM 256
            DIWS G+    L  G  P+   S    + A+             P   S   KD +++ 
Sbjct: 178 ADIWSLGITAIELAEGKPPY---SELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKC 234

Query: 257 LIRDPNNQITVAQILKHPW 275
           L ++P  + T  Q+LKHP+
Sbjct: 235 LQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  127 bits (322), Expect = 6e-33
 Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 38/230 (16%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG L++ +  ++ + E  A      +V AL + H  G +HRD+KP+N +   
Sbjct: 77  YLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI-- 134

Query: 152 DDENATLKATDFGLAFFFEEGKVYEE------------------------------VVGT 181
            D +  +K  DFGL     + K  E                                VGT
Sbjct: 135 -DADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGT 193

Query: 182 PLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP 241
           P Y+APE+L    YG E D WS G+ILY +L G  PF++++L  T   I++ +   +  P
Sbjct: 194 PDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPP 253

Query: 242 WPTISSSAKDLIRRMLIRDPNNQITVA-QILKHPWLNYENGEAWDRPIDT 290
            P +S  A DLI R L+ DP +++    +I  HP+     G  W+   +T
Sbjct: 254 DPPVSPEAIDLICR-LLCDPEDRLGSFEEIKSHPFF---KGIDWENLRET 299

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  123 bits (312), Expect = 2e-32
 Identities = 78/261 (29%), Positives = 109/261 (41%), Gaps = 45/261 (17%)

Query: 57  LCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------------- 91
           L  G  GR+ L    S    FA K + K    + G                         
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60

Query: 92  --------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
                   Y+  E+C GG L   + DR  + E  A      VV A    H+ GI++RDLK
Sbjct: 61  TFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120

Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWS 203
           PEN +    D N  +K  DFG A   + G+      GTP Y+APE++    Y   +D WS
Sbjct: 121 PENLLL---DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWS 177

Query: 204 AGLILYNLLSGAQPFWA--ESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP 261
            G++LY LL+G  PF    E        I+ +       P   I  +AKDLI+++L R+P
Sbjct: 178 LGILLYELLTGRPPFGEDDEDPMEIYNDIL-KGNGKLEFP-NYIDKAAKDLIKQLLRRNP 235

Query: 262 NNQI-----TVAQILKHPWLN 277
             ++      +  I KH W N
Sbjct: 236 EERLGNLKGGIKDIKKHKWFN 256

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  124 bits (313), Expect = 3e-32
 Identities = 55/178 (30%), Positives = 74/178 (41%), Gaps = 32/178 (17%)

Query: 127 NALHACHSNGIMHRDLKPEN-FIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLY 184
             L  CHS+ I+HRDLKP+N  I    + +  LK  DFGLA  F    + Y   V T  Y
Sbjct: 109 RGLAYCHSHRILHRDLKPQNILI----NRDGVLKLADFGLARAFGIPLRTYTHEVVTLWY 164

Query: 185 MAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM--------SREI 235
            APE LLG   Y   +DIWS G I   +++G   F  +S    L  I             
Sbjct: 165 RAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWP 224

Query: 236 DFKSDPW-----------------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                P                  P +     DL+ +ML  +P  +I+  + LKHP+ 
Sbjct: 225 GVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score =  123 bits (311), Expect = 5e-32
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 16/194 (8%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           DE ++  E  +GG L D I    R  E   A+V  +V+ AL   H+ G++HRD+K ++ +
Sbjct: 89  DELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSIL 147

Query: 149 FTTDDENATLKATDFGLAFFFEEGKVYEEV------VGTPLYMAPELLGPCKYGKEIDIW 202
            T+D     +K +DFG        +V +EV      VGTP +MAPE++    YG E+DIW
Sbjct: 148 LTSD---GRVKLSDFGFC-----AQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIW 199

Query: 203 SAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN 262
           S G+++  ++ G  P++ E     +  I         +    +S   +  + RML+RDP 
Sbjct: 200 SLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNL-HKVSPRLRSFLDRMLVRDPA 258

Query: 263 NQITVAQILKHPWL 276
            + T A++L HP+L
Sbjct: 259 QRATAAELLNHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  122 bits (308), Expect = 7e-32
 Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 6/179 (3%)

Query: 100 GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLK 159
           GG L   +S + +++E         +V AL   HS GI+HRD+KP+N +    DE   + 
Sbjct: 84  GGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL---DEQGHVH 140

Query: 160 ATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFW 219
            TDF +A       +     GTP YMAPE+L    Y   +D WS G+  Y  L G +P+ 
Sbjct: 141 ITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYR 200

Query: 220 AESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI--TVAQILKHPWL 276
             S       I +++         T S+ A D I ++L RDP  ++   +  +  HP+ 
Sbjct: 201 GHSRTIR-DQIRAKQETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score =  121 bits (306), Expect = 2e-31
 Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 26/198 (13%)

Query: 92  YLKREHCDGGTLVDRIS----DRERYTERAAASVFRSVVNALHACH-----SNGIMHRDL 142
           Y+  E+C+GG L   I     +R+   E     +   ++ AL+ CH      N ++HRDL
Sbjct: 77  YIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDL 136

Query: 143 KPENFIFTTDDENATLKATDFGLAFFFEEG----KVYEEVVGTPLYMAPELLGPCKYGKE 198
           KP N IF   D N  +K  DFGLA          K Y   VGTP YM+PE L    Y ++
Sbjct: 137 KPAN-IFL--DANNNVKLGDFGLAKILGHDSSFAKTY---VGTPYYMSPEQLNHMSYDEK 190

Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI-DFKSDPWPTISSSA-KDLIRRM 256
            DIWS G ++Y L + + PF            ++ +I + K    P   SS   ++I+ M
Sbjct: 191 SDIWSLGCLIYELCALSPPF-----TARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSM 245

Query: 257 LIRDPNNQITVAQILKHP 274
           L  DP+ + +  ++L+ P
Sbjct: 246 LNVDPDKRPSTEELLQLP 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  120 bits (300), Expect = 6e-30
 Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 24/208 (11%)

Query: 92  YLKREHCDGGTLVDRISDR---ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           YL  E+ DGG+L D +         +E  A  +   +++AL   HS GI+HRD+KPEN +
Sbjct: 74  YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENIL 133

Query: 149 FTTDDENATLKATDFGLAFFFEEGKV-------YEEVVGTPLYMAPELLG---PCKYGKE 198
              D     +K  DFGLA    +              VGTP YMAPE+L           
Sbjct: 134 LDRDGRV--VKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSS 191

Query: 199 IDIWSAGLILYNLLSGAQPF---WAESLYGTLTAIMSRE------IDFKSDPWPTISSSA 249
            DIWS G+ LY LL+G  PF      S       I+                   IS +A
Sbjct: 192 SDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAA 251

Query: 250 KDLIRRMLIRDPNNQITVAQILKHPWLN 277
            DL++++L +DP N+++ +  L H  L 
Sbjct: 252 SDLLKKLLAKDPKNRLSSSSDLSHDLLA 279

Length = 384

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score =  115 bits (290), Expect = 3e-29
 Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 6/189 (3%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           DE ++  E  +GG L D I    R  E   A+V  +V+ AL   H+ G++HRD+K ++ +
Sbjct: 90  DELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSIL 148

Query: 149 FTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            T D     +K +DFG  A   +E    + +VGTP +MAPEL+    YG E+DIWS G++
Sbjct: 149 LTHD---GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIM 205

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           +  ++ G  P++ E     +  I    +  K      +S S K  + R+L+RDP  + T 
Sbjct: 206 VIEMVDGEPPYFNEPPLKAMKMIRD-NLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATA 264

Query: 268 AQILKHPWL 276
           A++LKHP+L
Sbjct: 265 AELLKHPFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score =  114 bits (288), Expect = 8e-29
 Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 15/202 (7%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           +L  ++ +GG L   +  RE +TE         +V AL   H  GI++RD+K EN +   
Sbjct: 81  HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL-- 138

Query: 152 DDENATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELL--GPCKYGKEIDIWSAGLI 207
            D    +  TDFGL+  F  EE +      GT  YMAPE++  G   + K +D WS G++
Sbjct: 139 -DSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVL 197

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP-TISSSAKDLIRRMLIRDPNNQI- 265
            + LL+GA PF  +    + + I SR I     P+P T+S+ A+D I+++L +DP  ++ 
Sbjct: 198 TFELLTGASPFTVDGEQNSQSEI-SRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLG 256

Query: 266 --TVAQILKHPWLNYENGEAWD 285
                +I  HP+     G  WD
Sbjct: 257 ANGADEIKNHPFF---QGIDWD 275

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  113 bits (286), Expect = 8e-29
 Identities = 75/264 (28%), Positives = 107/264 (40%), Gaps = 47/264 (17%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGY---------LKR----- 95
           ++ + + + RG  G +Y      TG   A K IS     +E           LK      
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 96  ------------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                             E+ + G+L   I     + E   A     V+  L   H  G+
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGV 120

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEVVGTPLYMAPELL---GPC 193
           +HRD+K  N I TT D     K  DFG+A    +  K    VVGTP +MAPE++   G  
Sbjct: 121 IHRDIKAAN-ILTTKDGVV--KLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGAS 177

Query: 194 KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDL 252
                 DIWS G  +  LL+G  P++         A + R +     P P  IS   KD 
Sbjct: 178 ---TASDIWSLGCTVIELLTGNPPYY----DLNPMAALFRIVQDDHPPLPEGISPELKDF 230

Query: 253 IRRMLIRDPNNQITVAQILKHPWL 276
           + +   +DPN + T  Q+LKHPW+
Sbjct: 231 LMQCFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score =  115 bits (289), Expect = 1e-28
 Identities = 76/296 (25%), Positives = 123/296 (41%), Gaps = 76/296 (25%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR-------------- 95
           HF   + L +G+ GR++L     TG  FA K + K        +KR              
Sbjct: 2   HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHP 61

Query: 96  -------------------EHCDGG---TLVDRISDRERYTERAAASVFRSVVNALHACH 133
                              ++C GG    L+ R   +   +E  A      V+ AL   H
Sbjct: 62  FLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGK-CLSEEVARFYAAEVLLALEYLH 120

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAF--------------FFEEGKVYEEV- 178
             GI++RDLKPEN +     E+  +  +DF L+                         + 
Sbjct: 121 LLGIVYRDLKPENILLH---ESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIP 177

Query: 179 ---------------VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL 223
                          VGT  Y+APE++    +G  +D W+ G++LY +L G  PF   + 
Sbjct: 178 SETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237

Query: 224 YGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI----TVAQILKHPW 275
             T + I+ +E+ F     P +SSSA+DLIR++L++DP+ ++      A+I +HP+
Sbjct: 238 DETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPF 291

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  112 bits (283), Expect = 2e-28
 Identities = 76/266 (28%), Positives = 111/266 (41%), Gaps = 61/266 (22%)

Query: 60  GESGRIYLCTENSTGLQFACKSI------SKTSKS------------------------- 88
           G  G++Y      TG   A K I       KT K                          
Sbjct: 11  GTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH 70

Query: 89  -DEGYLKREHCDGGTLVD-----RISDRERYTERAAASVFRSVVNALHACHSNGIMHRDL 142
            ++ Y+  E+C GGTL +     RI D E         +       L   HS+GI+HRD+
Sbjct: 71  REKVYIFMEYCSGGTLEELLEHGRILD-EHVIRVYTLQLLE----GLAYLHSHGIVHRDI 125

Query: 143 KPENFIFTTDDENATLKATDFGLAFFFEE-----GKVYEEVVGTPLYMAPEL--LGPCK- 194
           KP N      D N  +K  DFG A   +      G+  + + GTP YMAPE+   G  K 
Sbjct: 126 KPANIFL---DHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKG 182

Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP-WPT---ISSSAK 250
           +G+  DIWS G ++  + +G +P W+E        IM   +     P  P    +S   K
Sbjct: 183 HGRAADIWSLGCVVLEMATGKRP-WSE--LDNEFQIMFH-VGAGHKPPIPDSLQLSPEGK 238

Query: 251 DLIRRMLIRDPNNQITVAQILKHPWL 276
           D + R L  DP  + T +++L+HP++
Sbjct: 239 DFLDRCLESDPKKRPTASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score =  113 bits (283), Expect = 4e-28
 Identities = 64/195 (32%), Positives = 106/195 (54%), Gaps = 18/195 (9%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           +E ++  E   GG L D +S + R  E   A+V  SV+ AL   HS G++HRD+K ++ +
Sbjct: 91  EELWVLMEFLQGGALTDIVS-QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSIL 149

Query: 149 FTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            T D     +K +DFG  A   ++    + +VGTP +MAPE++    YG E+DIWS G++
Sbjct: 150 LTLD---GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIM 206

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK------DLIRRMLIRDP 261
           +  ++ G  P++++S        M R    +  P P + ++ K      D + RML R+P
Sbjct: 207 VIEMVDGEPPYFSDS----PVQAMKR---LRDSPPPKLKNAHKISPVLRDFLERMLTREP 259

Query: 262 NNQITVAQILKHPWL 276
             + T  ++L HP+L
Sbjct: 260 QERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score =  114 bits (287), Expect = 5e-28
 Identities = 68/172 (39%), Positives = 93/172 (54%), Gaps = 10/172 (5%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG LV+ +S+ +   E+ A      VV AL A HS G +HRD+KP+N +   
Sbjct: 119 YMVMEYMPGGDLVNLMSNYD-IPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL-- 175

Query: 152 DDENATLKATDFGLAFFFE-EGKVY-EEVVGTPLYMAPELL----GPCKYGKEIDIWSAG 205
            D++  LK  DFG     +  G V  +  VGTP Y++PE+L    G   YG+E D WS G
Sbjct: 176 -DKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 234

Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           + LY +L G  PF+A+SL GT + IM  +          IS  AKDLI   L
Sbjct: 235 VFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFL 286

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  112 bits (282), Expect = 6e-28
 Identities = 68/189 (35%), Positives = 97/189 (51%), Gaps = 14/189 (7%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG L   +    R+ E  A      VV AL   HS  I++RDLKPEN +   
Sbjct: 77  YLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL-- 134

Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D +  +K TDFG A    +G+ Y  + GTP Y+APE++    YGK +D W+ G+++Y +
Sbjct: 135 -DSDGYIKITDFGFAKR-VKGRTYT-LCGTPEYLAPEIILSKGYGKAVDWWALGILIYEM 191

Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP-----NNQIT 266
           L+G  PF+ ++       I+  ++ F S      S  AKDLIR +L  D      N +  
Sbjct: 192 LAGYPPFFDDNPIQIYEKILEGKVRFPS----FFSPDAKDLIRNLLQVDLTKRLGNLKNG 247

Query: 267 VAQILKHPW 275
           V  I  HPW
Sbjct: 248 VNDIKNHPW 256

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  109 bits (276), Expect = 2e-27
 Identities = 69/271 (25%), Positives = 101/271 (37%), Gaps = 53/271 (19%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGY-LKRE-----HC----- 98
                + L +G SG +Y      TG  +A K I      +    L RE      C     
Sbjct: 2   DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYV 61

Query: 99  --------------------DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN-GI 137
                               DGG+L D +    +  E   A + R ++  L   H+   I
Sbjct: 62  VKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHI 121

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE-EVVGTPLYMAPELLGPCKYG 196
           +HRD+KP N +  +  E   +K  DFG++   E         VGT  YM+PE +    Y 
Sbjct: 122 IHRDIKPSNLLINSKGE---VKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYS 178

Query: 197 KEIDIWSAGLILYNLLSGAQPF-------WAESLYGTLTAIMSREIDFKSDPWP--TISS 247
              DIWS GL L     G  PF       + E +     AI            P    S 
Sbjct: 179 YAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQ----AICDGP----PPSLPAEEFSP 230

Query: 248 SAKDLIRRMLIRDPNNQITVAQILKHPWLNY 278
             +D I   L +DP  + + A++L+HP++  
Sbjct: 231 EFRDFISACLQKDPKKRPSAAELLQHPFIKK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  110 bits (277), Expect = 2e-27
 Identities = 63/178 (35%), Positives = 81/178 (45%), Gaps = 33/178 (18%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMA 186
            L  CHS+GI+HRDLKPEN +  T+     LK  DFGLA  F    + Y   V T  Y A
Sbjct: 110 GLAFCHSHGILHRDLKPENLLINTEG---VLKLADFGLARSFGSPVRPYTHYVVTRWYRA 166

Query: 187 PELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWA-----ESLY------GTLTAIMSRE 234
           PELL   K Y   +DIWS G I   LLS  +P +      + L+      GT    +  +
Sbjct: 167 PELLLGDKGYSTPVDIWSVGCIFAELLSR-RPLFPGKSEIDQLFKIFRTLGTPDPEVWPK 225

Query: 235 I------------DFKSDPWPTI----SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                             P P +    S  A DL+ +ML  DP+ +IT  Q L HP+ 
Sbjct: 226 FTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score =  109 bits (275), Expect = 3e-27
 Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 9/184 (4%)

Query: 96  EHCDGGTLVDRISDRER--YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E+ +GGTL D+I  ++   + E         +V+A+   H  GI+HRD+K  N   T   
Sbjct: 79  EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG 138

Query: 154 ENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLL 212
               +K  DFG++     E  + E VVGTP YM+PEL    KY  + DIW+ G +LY LL
Sbjct: 139 ---LIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELL 195

Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
           +  + F A +    +  I+          +   SS    L+  +L +DP  + T  ++L 
Sbjct: 196 TLKRTFDATNPLNLVVKIVQGNYTPVVSVY---SSELISLVHSLLQQDPEKRPTADEVLD 252

Query: 273 HPWL 276
            P L
Sbjct: 253 QPLL 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score =  110 bits (276), Expect = 7e-27
 Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 16/200 (8%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG L   +     + E  A      +  AL   H  GI++RDLKPEN +   
Sbjct: 76  YLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL-- 133

Query: 152 DDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
            D    +K TDFGL      EG V     GT  YMAPE+L    +GK +D WS G ++Y+
Sbjct: 134 -DAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYD 192

Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI----- 265
           +L+GA PF AE+   T+  I+  +++      P ++  A+DL++++L R+P++++     
Sbjct: 193 MLTGAPPFTAENRKKTIDKILKGKLNLP----PYLTPEARDLLKKLLKRNPSSRLGAGPG 248

Query: 266 TVAQILKHPWLNYENGEAWD 285
             A++  HP+  + N   WD
Sbjct: 249 DAAEVQSHPFFRHVN---WD 265

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  109 bits (274), Expect = 8e-27
 Identities = 62/180 (34%), Positives = 80/180 (44%), Gaps = 39/180 (21%)

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYM 185
             L   HSN I+HRDLKP N +      +  LK  DFGLA  F    +     V T  Y 
Sbjct: 113 RGLEYLHSNWILHRDLKPNNLLI---ASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYR 169

Query: 186 APELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGT-----LTAI--------- 230
           APELL G   YG  +D+WS G I   LL    PF    L G      L  I         
Sbjct: 170 APELLFGARHYGVGVDMWSVGCIFAELLLRV-PF----LPGDSDIDQLGKIFEALGTPTE 224

Query: 231 -----MSRE---IDFKSDP-------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
                ++     ++FK  P       +P  S  A DL++R+L  +PN +IT  Q L+HP+
Sbjct: 225 ENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  108 bits (273), Expect = 1e-26
 Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 49/256 (19%)

Query: 60  GESGRIYLCTENSTGLQFACKSISKTSKSDEG----------------------YLKREH 97
           G SG +Y  T+ +TG + A K +    ++ E                       YL  + 
Sbjct: 30  GASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDE 89

Query: 98  C-------DGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF 149
                   DGG+L D I+    R  E   A V R V+  L   HS  ++HRD+K +N + 
Sbjct: 90  LWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL 149

Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEE------VVGTPLYMAPELLGPCKYGKEIDIWS 203
           + D     +K  DFG A      ++ +E      VVGTP +MAPE++    YG ++DIWS
Sbjct: 150 SKDGS---VKLADFGFA-----AQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWS 201

Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREI-DFK-SDPWPTISSSAKDLIRRMLIRDP 261
            G++   +  G  P+  E     L  I ++ I   K  + W   S   KD + + L++DP
Sbjct: 202 LGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKW---SPEFKDFLNKCLVKDP 258

Query: 262 NNQITVAQILKHPWLN 277
             + +  ++L+HP+L 
Sbjct: 259 EKRPSAEELLQHPFLK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score =  106 bits (266), Expect = 7e-26
 Identities = 70/204 (34%), Positives = 109/204 (53%), Gaps = 17/204 (8%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           +L  ++ +GG L   +S RER+ E+        +V AL   H  GI++RD+K EN +   
Sbjct: 81  HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL-- 138

Query: 152 DDENATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELL--GPCKYGKEIDIWSAGLI 207
            D N  +  TDFGL+  F  +E +      GT  YMAP+++  G   + K +D WS G++
Sbjct: 139 -DSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVL 197

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPNNQIT 266
           +Y LL+GA PF  +    +   I SR I     P+P  +S+ AKD+I+R+L++DP  ++ 
Sbjct: 198 MYELLTGASPFTVDGEKNSQAEI-SRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLG 256

Query: 267 VA-----QILKHPWLNYENGEAWD 285
                  +I KHP+    N   WD
Sbjct: 257 CGPSDADEIKKHPFFQKIN---WD 277

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score =  106 bits (265), Expect = 1e-25
 Identities = 61/189 (32%), Positives = 104/189 (55%), Gaps = 6/189 (3%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           DE ++  E  +GG L D I    R  E   A+V  SV+ AL   H+ G++HRD+K ++ +
Sbjct: 92  DELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSIL 150

Query: 149 FTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            T+D     +K +DFG  A   +E    + +VGTP +MAPE++    YG E+DIWS G++
Sbjct: 151 LTSD---GRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIM 207

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           +  ++ G  P++ E     +  I    +  +      +SS  +  +  ML+R+P+ + T 
Sbjct: 208 VIEMIDGEPPYFNEPPLQAMRRIRD-NLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATA 266

Query: 268 AQILKHPWL 276
            ++L+HP+L
Sbjct: 267 QELLQHPFL 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score =  105 bits (264), Expect = 3e-25
 Identities = 70/207 (33%), Positives = 102/207 (49%), Gaps = 19/207 (9%)

Query: 92  YLKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           YL  ++  GG L+  +S   +R  E  A      +V A+ + H  G +HRD+KP+N +  
Sbjct: 77  YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL- 135

Query: 151 TDDENATLKATDFGLAF-FFEEGKVYEEV-VGTPLYMAPELL-----GPCKYGKEIDIWS 203
             D+N  ++  DFG       +G V   V VGTP Y++PE+L     G  +YG E D WS
Sbjct: 136 --DKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWS 193

Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSRE--IDFKSDPWPTISSSAKDLIRRMLIRDP 261
            G+ +Y +L G  PF+AESL  T   IM+ +    F  D    +S  AKDLIRR++    
Sbjct: 194 LGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDV-TDVSEEAKDLIRRLICSPE 252

Query: 262 N--NQITVAQILKHPWLNYENGEAWDR 286
               +  +     HP+     G  WD 
Sbjct: 253 TRLGRNGLQDFKDHPFF---EGIDWDN 276

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  104 bits (263), Expect = 6e-25
 Identities = 58/182 (31%), Positives = 76/182 (41%), Gaps = 35/182 (19%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV----VGTPL 183
            L   HS  ++HRDLKP N I    + N  LK  DFGLA   +  +  +      V T  
Sbjct: 115 GLKYLHSANVIHRDLKPSN-ILV--NSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRW 171

Query: 184 YMAPEL-LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS-------REI 235
           Y APEL L   +Y K IDIWS G I   LL+    F        L  I+         ++
Sbjct: 172 YRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDL 231

Query: 236 DFKSD----------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
            F +                 P     P  S  A DL+ +ML+ DP  +IT  + L HP+
Sbjct: 232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPY 291

Query: 276 LN 277
           L 
Sbjct: 292 LA 293

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  103 bits (258), Expect = 6e-25
 Identities = 69/262 (26%), Positives = 107/262 (40%), Gaps = 46/262 (17%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACK---------------SISKTSKSDE----- 90
           F I E+L  G  G +Y      TG   A K               SI K   S       
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYY 64

Query: 91  -GYLKR-------EHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRD 141
             Y K        E+C  G++ D +    +  TE   A++    +  L   HSN  +HRD
Sbjct: 65  GSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRD 124

Query: 142 LKPENFIFTTDDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEID 200
           +K  N +    +E    K  DFG++    +       V+GTP +MAPE++    Y  + D
Sbjct: 125 IKAGNILL---NEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKAD 181

Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK------DLIR 254
           IWS G+    +  G  P      Y  +   M       + P PT+S   K      D ++
Sbjct: 182 IWSLGITAIEMAEGKPP------YSDIHP-MRAIFMIPNKPPPTLSDPEKWSPEFNDFVK 234

Query: 255 RMLIRDPNNQITVAQILKHPWL 276
           + L++DP  + +  Q+L+HP++
Sbjct: 235 KCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score =  102 bits (256), Expect = 9e-25
 Identities = 61/181 (33%), Positives = 88/181 (48%), Gaps = 7/181 (3%)

Query: 96  EHCDGGTLVDRISDRER--YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E+  GGTL + I  R      E      F  ++ ALH  H+  I+HRDLK +N +   D 
Sbjct: 79  EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILL--DK 136

Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
               +K  DFG++           VVGTP Y++PEL     Y ++ DIW+ G +LY L S
Sbjct: 137 HKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELAS 196

Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
             + F A +L   +  IMS      SD +   S   + LI  ML  DP+ +  ++QI+  
Sbjct: 197 LKRAFEAANLPALVLKIMSGTFAPISDRY---SPDLRQLILSMLNLDPSKRPQLSQIMAQ 253

Query: 274 P 274
           P
Sbjct: 254 P 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  102 bits (257), Expect = 1e-24
 Identities = 59/185 (31%), Positives = 85/185 (45%), Gaps = 40/185 (21%)

Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVGTPL 183
           + A+  CHS+ I+HRD+KPEN +     E+  LK  DFG A            + V T  
Sbjct: 110 LQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPASPLTDYVATRW 166

Query: 184 YMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWA-----ESLY------GTLTAIM 231
           Y APELL G   YGK +D+W+ G I+  LL G +P +      + LY      G L    
Sbjct: 167 YRAPELLVGDTNYGKPVDVWAIGCIMAELLDG-EPLFPGDSDIDQLYLIQKCLGPLPP-- 223

Query: 232 SREIDFKSDP------WPTI--------------SSSAKDLIRRMLIRDPNNQITVAQIL 271
           S +  F S+P      +P                SS A D ++  L  DP  ++T  ++L
Sbjct: 224 SHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELL 283

Query: 272 KHPWL 276
           +HP+ 
Sbjct: 284 QHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score =  103 bits (258), Expect = 3e-24
 Identities = 74/266 (27%), Positives = 111/266 (41%), Gaps = 44/266 (16%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISK--------------------TSKSD 89
            F I  ++ +G  G+++L  +  TG   A K + K                    T+KS+
Sbjct: 2   DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSE 61

Query: 90  -------------EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                          YL  E+  GG     +++    +E  A      +  A+ A H  G
Sbjct: 62  WLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELG 121

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY-EEVVGTPLYMAPELLGPCKY 195
            +HRDLKPENF+    D +  +K TDFGL+   +    Y   VVG+P YMAPE+L    Y
Sbjct: 122 YIHRDLKPENFLI---DASGHIKLTDFGLS---KGIVTYANSVVGSPDYMAPEVLRGKGY 175

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS-REI---DFKSDPWPTISSSAKD 251
              +D WS G +LY  L G  PF   +   T   +   +E        DP   +S  A D
Sbjct: 176 DFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWD 235

Query: 252 LIRRMLIRDPNNQITVAQILKHPWLN 277
           LI +++        ++  I  HP+  
Sbjct: 236 LITKLINDPSRRFGSLEDIKNHPFFK 261

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score =  103 bits (259), Expect = 3e-24
 Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 21/212 (9%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG LV+ +S+ +   E+ A      VV AL A HS G++HRD+KP+N +   
Sbjct: 119 YMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL-- 175

Query: 152 DDENATLKATDFGLAFFFEE-GKVY-EEVVGTPLYMAPELL----GPCKYGKEIDIWSAG 205
            D++  LK  DFG     +E G V  +  VGTP Y++PE+L    G   YG+E D WS G
Sbjct: 176 -DKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 234

Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSRE--IDFKSDPWPTISSSAKDLIRRML----IR 259
           + L+ +L G  PF+A+SL GT + IM  +  ++F  D    IS  AK+LI   L    +R
Sbjct: 235 VFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPED--VEISKHAKNLICAFLTDREVR 292

Query: 260 DPNNQITVAQILKHPWLNYENGEAWDRPIDTA 291
              N   V +I +HP+   +    WD   +TA
Sbjct: 293 LGRN--GVEEIKQHPFFKNDQWN-WDNIRETA 321

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score =  101 bits (254), Expect = 5e-24
 Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 13/201 (6%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           +L  ++  GG +   +  R+ ++E         ++ AL   H  GI++RD+K EN +   
Sbjct: 81  HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL-- 138

Query: 152 DDENATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLIL 208
            D    +  TDFGL+  F  EE +      GT  YMAPE++ G   +GK +D WS G+++
Sbjct: 139 -DSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILI 197

Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPNNQITV 267
           + LL+GA PF  E    T + + SR I     P+P+ I   A+DL+ ++L +DP  ++  
Sbjct: 198 FELLTGASPFTLEGERNTQSEV-SRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGA 256

Query: 268 A-----QILKHPWLNYENGEA 283
                 +I +HP+    + EA
Sbjct: 257 GPQGASEIKEHPFFKGLDWEA 277

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score =  101 bits (252), Expect = 6e-24
 Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 36/262 (13%)

Query: 46  DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------ 87
           D K  +T  E++ +G SG +Y   + +TG + A K ++   +                  
Sbjct: 16  DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKH 75

Query: 88  ------------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN 135
                        DE ++  E+  GG+L D +++     E   A+V R  + AL   HSN
Sbjct: 76  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSN 134

Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
            ++HRD+K +N +   D    ++K TDFG  A    E      +VGTP +MAPE++    
Sbjct: 135 QVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 191

Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR 254
           YG ++DIWS G++   ++ G  P+  E+    L  I +       +P   +S+  +D + 
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLN 250

Query: 255 RMLIRDPNNQITVAQILKHPWL 276
           R L  D   + +  ++L+HP+L
Sbjct: 251 RCLEMDVEKRGSAKELLQHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  100 bits (252), Expect = 6e-24
 Identities = 74/290 (25%), Positives = 106/290 (36%), Gaps = 71/290 (24%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------- 88
           + + ++L  G  G +YL     TG   A K + K   S                      
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNI 60

Query: 89  ----------DEGYLKREHCDGGTLVDRISDRER--YTERAAASVFRSVVNALHACHSNG 136
                     DE Y   E+ +G  L   + DR+   ++E    S+   ++  L   H +G
Sbjct: 61  VKLKEVFRENDELYFVFEYMEG-NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG 119

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK-Y 195
             HRDLKPEN + +  +    +K  DFGLA        Y + V T  Y APE+L     Y
Sbjct: 120 FFHRDLKPENLLVSGPE---VVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSY 176

Query: 196 GKEIDIWSAGLI---LYN---LLSGA-----------------QPFW------AESLYGT 226
              +DIW+ G I   LY    L  G+                 +  W      A  L   
Sbjct: 177 SSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR 236

Query: 227 LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                   +       P  S  A DLI+ ML  DP  + T +Q L+HP+ 
Sbjct: 237 FPQFAPTSLH---QLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score =  100 bits (250), Expect = 8e-24
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 28/204 (13%)

Query: 89  DEGYLKREHCDGGTLVDRISDRER---YTERAAASVFRSVVNALHACHSNGIMHRDLKPE 145
           DE +L   +  GG+L+D +          E   A+V + V+  L   HSNG +HRD+K  
Sbjct: 72  DELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAG 131

Query: 146 NFIFTTDDENATLKATDFGL-AFFFEEG----KVYEEVVGTPLYMAPELLGPCK-YGKEI 199
           N +     E+ ++K  DFG+ A   + G    KV +  VGTP +MAPE++     Y  + 
Sbjct: 132 NILL---GEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKA 188

Query: 200 DIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI---------SSSAK 250
           DIWS G+    L +GA P+   S Y  +  +M   +  ++DP P++         S S +
Sbjct: 189 DIWSFGITAIELATGAAPY---SKYPPMKVLM---LTLQNDP-PSLETGADYKKYSKSFR 241

Query: 251 DLIRRMLIRDPNNQITVAQILKHP 274
            +I   L +DP+ + T  ++LKH 
Sbjct: 242 KMISLCLQKDPSKRPTAEELLKHK 265

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score =  102 bits (254), Expect = 1e-23
 Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 23/213 (10%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG LV+ +S+ +   E+ A      VV AL A HS G +HRD+KP+N +   
Sbjct: 119 YMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL-- 175

Query: 152 DDENATLKATDFGLAF-FFEEGKVY-EEVVGTPLYMAPELL----GPCKYGKEIDIWSAG 205
            D++  LK  DFG      +EG V  +  VGTP Y++PE+L    G   YG+E D WS G
Sbjct: 176 -DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 234

Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSRE--IDFKSDPWPTISSSAKDLIRRML----IR 259
           + LY +L G  PF+A+SL GT + IM+ +  + F  D    IS  AK+LI   L    +R
Sbjct: 235 VFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLICAFLTDREVR 292

Query: 260 DPNNQITVAQILKHPWLNYENGE-AWDRPIDTA 291
              N   V +I +H +  ++N + AW+   DT 
Sbjct: 293 LGRN--GVEEIKRHLF--FKNDQWAWETLRDTV 321

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  100 bits (251), Expect = 1e-23
 Identities = 56/194 (28%), Positives = 80/194 (41%), Gaps = 33/194 (17%)

Query: 112 RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-- 169
           ++TE       + ++  L   HSNGI+HRD+K  N +    + +  LK  DFGLA  +  
Sbjct: 96  KFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLARPYTK 152

Query: 170 EEGKVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLT 228
                Y   V T  Y  PELL G  +YG E+D+WS G IL  L  G   F   +    L 
Sbjct: 153 RNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLE 212

Query: 229 AI-----------------MSREIDFKSDPWP----------TISSSAKDLIRRMLIRDP 261
            I                 +    + K                I  SA DL+ ++L  DP
Sbjct: 213 KIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDP 272

Query: 262 NNQITVAQILKHPW 275
             +I+  Q L+H +
Sbjct: 273 KKRISADQALQHEY 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score =  101 bits (252), Expect = 1e-23
 Identities = 75/209 (35%), Positives = 104/209 (49%), Gaps = 20/209 (9%)

Query: 92  YLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           YL  ++  GG L+  +S  E R  E  A      +V A+H+ H    +HRD+KP+N +  
Sbjct: 77  YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL- 135

Query: 151 TDDENATLKATDFGLAF-FFEEGKVYEEV-VGTPLYMAPELL-----GPCKYGKEIDIWS 203
             D N  ++  DFG      ++G V   V VGTP Y++PE+L     G  KYG E D WS
Sbjct: 136 --DMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWS 193

Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPN 262
            G+ +Y +L G  PF+AESL  T   IM+ E  F+     T +S  AKDLI+R++     
Sbjct: 194 LGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRER 253

Query: 263 --NQITVAQILKHP------WLNYENGEA 283
              Q  +    KH       W N  N EA
Sbjct: 254 RLGQNGIEDFKKHAFFEGIDWENIRNLEA 282

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score =  100 bits (251), Expect = 1e-23
 Identities = 75/209 (35%), Positives = 105/209 (50%), Gaps = 20/209 (9%)

Query: 92  YLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           YL  ++  GG L+  +S  E R  E  A      +V A+ + H    +HRD+KP+N +  
Sbjct: 77  YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM- 135

Query: 151 TDDENATLKATDFGLAF-FFEEGKVYEEV-VGTPLYMAPELL-----GPCKYGKEIDIWS 203
             D N  ++  DFG      E+G V   V VGTP Y++PE+L     G  KYG E D WS
Sbjct: 136 --DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWS 193

Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPN 262
            G+ +Y +L G  PF+AESL  T   IM+ +  F+     T +S  AKDLIRR++    +
Sbjct: 194 LGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREH 253

Query: 263 --NQITVAQILKHP------WLNYENGEA 283
              Q  +    +HP      W N  N EA
Sbjct: 254 RLGQNGIEDFKQHPFFTGIDWDNIRNCEA 282

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 99.3 bits (248), Expect = 2e-23
 Identities = 55/223 (24%), Positives = 88/223 (39%), Gaps = 55/223 (24%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVF---------RSVVNALHACHSNGIMHRDL 142
            L  EH D         D   Y  +               R ++  +   HS+ I+HRDL
Sbjct: 82  TLVFEHVD--------QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDL 133

Query: 143 KPENFIFTTDDENATLKATDFGLAFFFEEGKVYE------EVVGTPLYMAPELLGPCKYG 196
           KP+N + T+D     +K  DFGLA      ++Y        VV T  Y APE+L    Y 
Sbjct: 134 KPQNILVTSD---GQVKIADFGLA------RIYSFEMALTSVVVTLWYRAPEVLLQSSYA 184

Query: 197 KEIDIWSAGLI---LYNL------------------LSG--AQPFWAESLYGTLTAIMSR 233
             +D+WS G I   L+                    + G  ++  W  ++    ++  S 
Sbjct: 185 TPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSY 244

Query: 234 EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                    P I     DL+++ML  +P+ +I+  + L+HP+ 
Sbjct: 245 TPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 98.5 bits (246), Expect = 3e-23
 Identities = 68/270 (25%), Positives = 110/270 (40%), Gaps = 57/270 (21%)

Query: 56  ELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------- 88
           EL  G SG +       TG   A K+I                                 
Sbjct: 8   ELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGA 67

Query: 89  --DEG--YLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSN-GIMHRD 141
             + G   +  E+ DGG+L D+I      R  ER    +  +V+  L   H    I+HRD
Sbjct: 68  FYNNGDISICMEYMDGGSL-DKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRD 126

Query: 142 LKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGK 197
           +KP N +  +  +   +K  DFG++     G++   +    VGT  YMAPE +    Y  
Sbjct: 127 VKPSNILVNSRGQ---IKLCDFGVS-----GQLVNSLAKTFVGTSSYMAPERIQGNDYSV 178

Query: 198 EIDIWSAGLILYNLLSGAQPFWAE-SLYGTLTAIMSREID-----FKSDPWPTISSSAKD 251
           + DIWS GL L  L +G  P+  E      +  ++   ++       S  +   S   +D
Sbjct: 179 KSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKF---SPDFQD 235

Query: 252 LIRRMLIRDPNNQITVAQILKHPWLN-YEN 280
            +   LI+DP  + +  ++L+HP++  YE+
Sbjct: 236 FVNLCLIKDPRERPSYKELLEHPFIKKYES 265

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 99.5 bits (248), Expect = 4e-23
 Identities = 74/231 (32%), Positives = 107/231 (46%), Gaps = 26/231 (11%)

Query: 61  ESGRIYLCTENS---TGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRE-RYTER 116
           E  R  L   NS     LQ+A +        D  YL  E+  GG L+  ++  E ++ E 
Sbjct: 49  EEERDILSISNSPWIPQLQYAFQD------KDNLYLVMEYQPGGDLLSLLNRYEDQFDED 102

Query: 117 AAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG-LAFFFEEGKVY 175
            A      +V A+H+ H  G +HRD+KPEN +    D    +K  DFG  A       V 
Sbjct: 103 MAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTANKMVN 159

Query: 176 EEV-VGTPLYMAPELL------GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLT 228
            ++ VGTP Y+APE+L      G   YG E D WS G+I Y ++ G  PF   +   T  
Sbjct: 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYN 219

Query: 229 AIMS--REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
            IM+  R + F  D  P +SS   DLI+ +L      ++    +  HP+ +
Sbjct: 220 NIMNFQRFLKFPED--PKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFS 267

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 98.3 bits (245), Expect = 5e-23
 Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 25/196 (12%)

Query: 96  EHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           E CDGG L   + + ER  TE     V R ++ AL+  HS+ ++HRDLK  N + T D  
Sbjct: 82  EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLD-- 139

Query: 155 NATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK------YGKEIDIWSAGLI 207
              +K  DFG+ A      +  +  +GTP +MAPE++  C+      Y  + DIWS G+ 
Sbjct: 140 -GDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVA-CETFKDNPYDYKADIWSLGIT 197

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI------SSSAKDLIRRMLIRDP 261
           L  L     P    +    L  I+      KS+P PT+      SSS  D ++  L++DP
Sbjct: 198 LIELAQMEPPHHELNPMRVLLKIL------KSEP-PTLDQPSKWSSSFNDFLKSCLVKDP 250

Query: 262 NNQITVAQILKHPWLN 277
           +++ T A++LKHP+++
Sbjct: 251 DDRPTAAELLKHPFVS 266

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 97.9 bits (244), Expect = 8e-23
 Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 23/202 (11%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG L   + +  R++          +V AL   HS  I++RDLKPEN +   
Sbjct: 77  YMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL-- 134

Query: 152 DDENATLKATDFGLAFFFEEGKVYEE---VVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
            D+   +K TDFG A      K+ +    + GTP Y+APE++    + K +D W+ G+++
Sbjct: 135 -DKEGHIKLTDFGFA-----KKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILI 188

Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI--- 265
           Y +L G  PF+ ++ +G    I++ +++F       +   AKDLI+++L+ D   ++   
Sbjct: 189 YEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HLDLYAKDLIKKLLVVDRTRRLGNM 244

Query: 266 --TVAQILKHPWLNYENGEAWD 285
                 +  H W    +   WD
Sbjct: 245 KNGADDVKNHRWFKSVD---WD 263

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 97.5 bits (242), Expect = 1e-22
 Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 36/262 (13%)

Query: 46  DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------ 87
           D K  +T  E++ +G SG +Y   + +TG + A K ++   +                  
Sbjct: 16  DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN 75

Query: 88  ------------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN 135
                        DE ++  E+  GG+L D +++     E   A+V R  + AL   HSN
Sbjct: 76  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSN 134

Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
            ++HRD+K +N +   D    ++K TDFG  A    E      +VGTP +MAPE++    
Sbjct: 135 QVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 191

Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR 254
           YG ++DIWS G++   ++ G  P+  E+    L  I +       +P   +S+  +D + 
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP-ERLSAVFRDFLN 250

Query: 255 RMLIRDPNNQITVAQILKHPWL 276
           R L  D + + +  ++L+HP+L
Sbjct: 251 RCLEMDVDRRGSAKELLQHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 97.1 bits (242), Expect = 3e-22
 Identities = 59/174 (33%), Positives = 79/174 (45%), Gaps = 32/174 (18%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPELLG 191
           HS  ++HRDLKP N +    + N  LK  DFGLA    E+G    E V T  Y APELL 
Sbjct: 125 HSANVLHRDLKPSNLLL---NANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLL 181

Query: 192 PC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS-------REIDF------ 237
            C +Y   ID+WS G I   LL     F  +     L  I          ++ F      
Sbjct: 182 NCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241

Query: 238 ----KSDP----------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +S P          +P  +  A DL+ +ML+ DP+ +ITV + L HP+L 
Sbjct: 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLA 295

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 95.9 bits (239), Expect = 3e-22
 Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 32/180 (17%)

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPL 183
           ++  +  CHS+ I+HRD+KPEN + +   ++  +K  DFG A      G+VY + V T  
Sbjct: 109 ILRGIEFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFARTLAAPGEVYTDYVATRW 165

Query: 184 YMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----LY------GTLT---- 228
           Y APELL G  KYG+ +DIW+ G ++  +L+G   F  +S    LY      G L     
Sbjct: 166 YRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQ 225

Query: 229 ---------AIMS----REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
                    A M     +EI+     +P +S    DL ++ L  DP+++ + +Q+L H +
Sbjct: 226 EIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 96.7 bits (240), Expect = 4e-22
 Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 22/211 (10%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L   +S    ++E         +V+AL   HS  I++RDLK EN +    D++
Sbjct: 75  EYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML---DKD 131

Query: 156 ATLKATDFGLAFFFEEG----KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
             +K TDFGL    +EG       +   GTP Y+APE+L    YG+ +D W  G+++Y +
Sbjct: 132 GHIKITDFGLC---KEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188

Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI-----T 266
           + G  PF+ +        I+  +I F      T+S+ AK L+  +LI+DPN ++      
Sbjct: 189 MCGRLPFYNQDHEKLFELILMEDIKFPR----TLSADAKSLLSGLLIKDPNKRLGGGPDD 244

Query: 267 VAQILKHPWLNYENGEAWDRPIDTAIISRVK 297
             +I++H +     G  W    D  ++   K
Sbjct: 245 AKEIMRHSFF---TGVNWQDVYDKKLVPPFK 272

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 96.4 bits (240), Expect = 5e-22
 Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 19/189 (10%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L   +S    ++E  A      +V+AL   HS  +++RDLK EN +    D++
Sbjct: 75  EYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML---DKD 131

Query: 156 ATLKATDFGLAFFFEEGKVYEEVV----GTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
             +K TDFGL    +EG      +    GTP Y+APE+L    YG+ +D W  G+++Y +
Sbjct: 132 GHIKITDFGLC---KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188

Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI-----T 266
           + G  PF+ +        I+  EI F      T+S  AK L+  +L +DP  ++      
Sbjct: 189 MCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPED 244

Query: 267 VAQILKHPW 275
             +I++H +
Sbjct: 245 AKEIMEHRF 253

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 96.0 bits (239), Expect = 6e-22
 Identities = 74/280 (26%), Positives = 115/280 (41%), Gaps = 57/280 (20%)

Query: 48  KLH-FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS-------------------- 86
           KL  F + E L  G  GR+ +     TG  +A K + K                      
Sbjct: 16  KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL 75

Query: 87  -------------KSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACH 133
                          +  Y   E   GG L   +    R+    A      +V A    H
Sbjct: 76  SHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLH 135

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE---VVGTPLYMAPELL 190
           S  I++RDLKPEN +    D    +K TDFG A      KV +    + GTP Y+APE++
Sbjct: 136 SKDIIYRDLKPENLLL---DNKGHVKVTDFGFA-----KKVPDRTFTLCGTPEYLAPEVI 187

Query: 191 GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK 250
               +GK +D W+ G++LY  ++G  PF+ ++ +     I++  + F +  W      A+
Sbjct: 188 QSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN--W--FDGRAR 243

Query: 251 DLIRRMLIRDPNNQI-----TVAQILKHPWLNYENGEAWD 285
           DL++ +L  D   ++      VA +  HP   Y +G  WD
Sbjct: 244 DLVKGLLQTDHTKRLGTLKGGVADVKNHP---YFHGANWD 280

Length = 329

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 95.2 bits (236), Expect = 8e-22
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 36/262 (13%)

Query: 46  DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------ 87
           D K  +T  E++ +G SG +Y   + +TG + A + ++   +                  
Sbjct: 17  DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 76

Query: 88  ------------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN 135
                        DE ++  E+  GG+L D +++     E   A+V R  + AL   HSN
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSN 135

Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
            ++HRD+K +N +   D    ++K TDFG  A    E      +VGTP +MAPE++    
Sbjct: 136 QVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192

Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR 254
           YG ++DIWS G++   ++ G  P+  E+    L  I +       +P   +S+  +D + 
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLN 251

Query: 255 RMLIRDPNNQITVAQILKHPWL 276
           R L  D   + +  ++L+H +L
Sbjct: 252 RCLDMDVEKRGSAKELLQHQFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 94.1 bits (234), Expect = 9e-22
 Identities = 57/184 (30%), Positives = 82/184 (44%), Gaps = 13/184 (7%)

Query: 96  EHCDGGTLVDRISDRER----YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           E+   G L   IS R++      E+    +F  ++  L A H   I+HRDLK  N I   
Sbjct: 79  EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSAN-ILLV 137

Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
              N  +K  D G++   ++       +GTP YMAPE+     Y  + DIWS G +LY +
Sbjct: 138 A--NDLVKIGDLGISKVLKKNMAKT-QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEM 194

Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI-SSSAKDLIRRMLIRDPNNQITVAQI 270
            + A PF A S+      +       K  P P I S   ++ IR ML   P  +    +I
Sbjct: 195 ATFAPPFEARSMQDLRYKVQRG----KYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKI 250

Query: 271 LKHP 274
           L  P
Sbjct: 251 LASP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 94.0 bits (233), Expect = 2e-21
 Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 36/262 (13%)

Query: 46  DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------ 87
           D K  +T  E++ +G SG ++   + +TG + A K I+   +                  
Sbjct: 16  DPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKN 75

Query: 88  ------------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN 135
                        DE ++  E+  GG+L D +++     E   A+V R  + AL   H+N
Sbjct: 76  PNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHAN 134

Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
            ++HRD+K +N +   D    ++K TDFG  A    E      +VGTP +MAPE++    
Sbjct: 135 QVIHRDIKSDNVLLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 191

Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR 254
           YG ++DIWS G++   ++ G  P+  E+    L  I +       +P   +S   +D + 
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSPIFRDFLN 250

Query: 255 RMLIRDPNNQITVAQILKHPWL 276
           R L  D   + +  ++L+HP+L
Sbjct: 251 RCLEMDVEKRGSAKELLQHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 92.9 bits (231), Expect = 2e-21
 Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 7/194 (3%)

Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + ++  Y+  E   GG+L   +     + E       R ++  L   H    +HRD+K
Sbjct: 70  TEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIK 129

Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPC-KYGKEIDIW 202
             N +    D N  +K  DFG+A    E    +   G+P +MAPE++     YG   DIW
Sbjct: 130 GANILV---DTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIW 186

Query: 203 SAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN 262
           S G  +  + +G  P+        +  I  R  +    P   +S  AKD I + L RDP+
Sbjct: 187 SLGCTVLEMATGKPPWSQLEGVAAVFKI-GRSKELPPIP-DHLSDEAKDFILKCLQRDPS 244

Query: 263 NQITVAQILKHPWL 276
            + T A++L+HP++
Sbjct: 245 LRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 93.1 bits (232), Expect = 3e-21
 Identities = 68/268 (25%), Positives = 111/268 (41%), Gaps = 58/268 (21%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------- 90
           FT+ E + +G  G +Y   +  T    A K I      DE                    
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT 62

Query: 91  ----GYLKR-------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
                +LK        E+C GG+ +D +    +  E   A + R V+  L   H  G +H
Sbjct: 63  KYYGSFLKGSKLWIIMEYCGGGSCLDLLK-PGKLDETYIAFILREVLLGLEYLHEEGKIH 121

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV------VGTPLYMAPELLGPC 193
           RD+K  N + +   E   +K  DFG++     G++   +      VGTP +MAPE++   
Sbjct: 122 RDIKAANILLS---EEGDVKLADFGVS-----GQLTSTMSKRNTFVGTPFWMAPEVIKQS 173

Query: 194 KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI-----SSS 248
            Y ++ DIWS G+    L  G  P    S    +  +    I  K++P P++     S  
Sbjct: 174 GYDEKADIWSLGITAIELAKGEPPL---SDLHPMRVLF--LIP-KNNP-PSLEGNKFSKP 226

Query: 249 AKDLIRRMLIRDPNNQITVAQILKHPWL 276
            KD +   L +DP  + +  ++LKH ++
Sbjct: 227 FKDFVSLCLNKDPKERPSAKELLKHKFI 254

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 93.1 bits (232), Expect = 4e-21
 Identities = 57/179 (31%), Positives = 77/179 (43%), Gaps = 33/179 (18%)

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GKVYEEVVGTPLYM 185
           + +   H N I+HRDLK  N +         LK  DFGLA  +    K Y ++V T  Y 
Sbjct: 117 SGVAHLHDNWILHRDLKTSNLLLNNRGI---LKICDFGLAREYGSPLKPYTQLVVTLWYR 173

Query: 186 APE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------SREI--D 236
           APE LLG  +Y   ID+WS G I   LL+    F  +S    L  I       + +I   
Sbjct: 174 APELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPG 233

Query: 237 FKSDP------------------WPTISSSAK--DLIRRMLIRDPNNQITVAQILKHPW 275
           F   P                  +P +S S    DL+ R+L  DP  +I+    LKHP+
Sbjct: 234 FSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 95.5 bits (237), Expect = 4e-21
 Identities = 70/202 (34%), Positives = 101/202 (50%), Gaps = 18/202 (8%)

Query: 87  KSDEGYLK-REHCDGGTLVDRISDRER----YTERAAASVFRSVVNALHACHSNGIMHRD 141
           KSD+  L   E+  GG L  +I  R +    + E     +F  +V AL   HS  +MHRD
Sbjct: 135 KSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRD 194

Query: 142 LKPEN-FIFTTDDENATLKATDFGLAFFFEEG---KVYEEVVGTPLYMAPELLGPCKYGK 197
           LK  N F+  T      +K  DFG +  + +     V     GTP Y+APEL    +Y K
Sbjct: 195 LKSANIFLMPT----GIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSK 250

Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRM 256
           + D+WS G+ILY LL+  +PF   S       IM + +  K DP+P  +SS  K L+  +
Sbjct: 251 KADMWSLGVILYELLTLHRPFKGPS----QREIMQQVLYGKYDPFPCPVSSGMKALLDPL 306

Query: 257 LIRDPNNQITVAQILKHPWLNY 278
           L ++P  + T  Q+L   +L Y
Sbjct: 307 LSKNPALRPTTQQLLHTEFLKY 328

Length = 478

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 92.5 bits (230), Expect = 7e-21
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 28/160 (17%)

Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA---FFFEEGKVYE-- 176
           F   V AL   H+ GI+HRDLKP+N + T+      +K TDFGL+          +YE  
Sbjct: 107 FAETVLALEYLHNYGIVHRDLKPDNLLITS---MGHIKLTDFGLSKIGLMSLTTNLYEGH 163

Query: 177 -----------EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG 225
                      +V GTP Y+APE++    YGK +D W+ G+ILY  L G  PF+ ++   
Sbjct: 164 IEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE 223

Query: 226 TLTAIMSREIDFKSDPWP----TISSSAKDLIRRMLIRDP 261
               ++S +I+     WP     + + A+DLI R+L ++P
Sbjct: 224 LFGQVISDDIE-----WPEGDEALPADAQDLISRLLRQNP 258

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 92.7 bits (230), Expect = 8e-21
 Identities = 64/247 (25%), Positives = 102/247 (41%), Gaps = 48/247 (19%)

Query: 59  RGESGRIYLCTENSTGLQFACKSISK---------------------TSKSD-------- 89
           +G  G++Y   +  T   +A K +SK                     T   +        
Sbjct: 3   KGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLK 62

Query: 90  -------EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDL 142
                  + YL  ++  GG L   +    R++E  A      +V AL   H   I++RDL
Sbjct: 63  FSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDL 122

Query: 143 KPENFIFTTDDENATLKATDFGLAFF-FEEGKVYEEVVGTPLYMAPE-LLGPCKYGKEID 200
           KPEN +    D    +   DFGL+     + K      GT  Y+APE LL    Y K +D
Sbjct: 123 KPENILL---DATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVD 179

Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP--TISSSAKDLIRRMLI 258
            WS G++++ +  G  PF+AE      T  M R I F    +P   +S   +  ++ +L 
Sbjct: 180 FWSLGVLVFEMCCGWSPFYAED-----TQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLN 234

Query: 259 RDPNNQI 265
           R+P +++
Sbjct: 235 RNPQHRL 241

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 91.7 bits (228), Expect = 2e-20
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 24/201 (11%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L+  I    R+ E  A      +V  L   H  GI++RDLK +N +    D  
Sbjct: 76  EYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DSE 132

Query: 156 ATLKATDFGLAFFFEEGKVYEEVV----GTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
             +K  DFG+    +EG +         GTP Y+APE+L    YG  +D W+ G++LY +
Sbjct: 133 GHIKIADFGMC---KEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEM 189

Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPNNQITV--- 267
           L+G  PF  +       +I+  E+ +     P  +S  AK +++  L ++P  ++     
Sbjct: 190 LAGQSPFEGDDEDELFQSILEDEVRY-----PRWLSKEAKSILKSFLTKNPEKRLGCLPT 244

Query: 268 --AQILKHPWLNYENGEAWDR 286
               I  HP+    +   WD+
Sbjct: 245 GEQDIKGHPFFREID---WDK 262

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 91.4 bits (227), Expect = 2e-20
 Identities = 57/173 (32%), Positives = 77/173 (44%), Gaps = 30/173 (17%)

Query: 132 CHSNGIMHRDLKPENFIFTTDDENATLKATDFGL--AFFFEEGKVYEEVVGTPLYMAPE- 188
           CH +G+MHRDLKP+N +   D +   LK  D GL  AF         E+V T  Y APE 
Sbjct: 126 CHKHGVMHRDLKPQNLL--VDKQKGLLKIADLGLGRAFSIPVKSYTHEIV-TLWYRAPEV 182

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREI--- 235
           LLG   Y   +DIWS G I   +      F  +S          L GT T  +   +   
Sbjct: 183 LLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKL 242

Query: 236 -DFKSDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
            D+   P W         P +S    DL+++ML  DP  +I+    L HP+ +
Sbjct: 243 RDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 91.6 bits (227), Expect = 2e-20
 Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L   +S    +TE  A      +V+AL   HS  +++RD+K EN +    D++
Sbjct: 75  EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKD 131

Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TDFGL      +G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ G
Sbjct: 132 GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 191

Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
             PF+ +        I+  EI F      T+S  AK L+  +L +DP  ++
Sbjct: 192 RLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 238

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 91.6 bits (228), Expect = 2e-20
 Identities = 64/182 (35%), Positives = 83/182 (45%), Gaps = 37/182 (20%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE----EVVGTPL 183
            L   HS  ++HRDLKP N +  T   N  LK  DFGLA   +    +     E V T  
Sbjct: 118 GLKYIHSANVLHRDLKPSNLLLNT---NCDLKICDFGLARIADPEHDHTGFLTEYVATRW 174

Query: 184 YMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY-----------GT----- 226
           Y APE +L    Y K IDIWS G IL  +LS  +P +    Y           GT     
Sbjct: 175 YRAPEIMLNSKGYTKAIDIWSVGCILAEMLSN-RPLFPGKDYLHQLNLILGVLGTPSQED 233

Query: 227 LTAIMS-------REIDFKSD-PW----PTISSSAKDLIRRMLIRDPNNQITVAQILKHP 274
           L  I+S       + + FK   PW    P     A DL+ +ML  +P+ +ITV + L HP
Sbjct: 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHP 293

Query: 275 WL 276
           +L
Sbjct: 294 YL 295

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 91.1 bits (226), Expect = 3e-20
 Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 19/212 (8%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E  +GG L+  I    R+ E  A      + +AL   H  GI++RDLK +N +    D  
Sbjct: 76  EFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL---DHE 132

Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
              K  DFG+       GK      GTP Y+APE+L    YG  +D W+ G++LY +L G
Sbjct: 133 GHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG 192

Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI-TVAQ---- 269
             PF AE+      AI++ E+ + +  W  +S  A D+++  + ++P  ++ ++      
Sbjct: 193 HAPFEAENEDDLFEAILNDEVVYPT--W--LSQDAVDILKAFMTKNPTMRLGSLTLGGEE 248

Query: 270 -ILKHPW---LNYENGEAWDRPIDTAIISRVK 297
            IL+HP+   L++E  +   R I+     R+K
Sbjct: 249 AILRHPFFKELDWE--KLNRRQIEPPFRPRIK 278

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 91.7 bits (228), Expect = 3e-20
 Identities = 71/295 (24%), Positives = 118/295 (40%), Gaps = 60/295 (20%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG ++  +  ++ +TE          + A+ + H  G +HRD+KP+N +   
Sbjct: 77  YLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL-- 134

Query: 152 DDENATLKATDFGLAFFFEEGKVYE----------------------------------- 176
            D    +K +DFGL    ++    E                                   
Sbjct: 135 -DAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRR 193

Query: 177 ----EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS 232
                 VGTP Y+APE+     Y KE D WS G+I+Y +L G  PF +++   T   I++
Sbjct: 194 ALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIIN 253

Query: 233 REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI---TVAQILKHPWLNYENGEAWD--RP 287
            +   +      +S  AKDLI+R+   +   ++    V +I  HP+     G  W+  R 
Sbjct: 254 WKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFF---KGVDWEHIRE 309

Query: 288 IDTAIISRVKQFRAMS---KLKKLALKVIVENLPAEEIQKHKE------TFKQMD 333
               II  +K     S     +++ L V     P     K K+      T+K+ +
Sbjct: 310 RPAPIIPELKSITDTSNFDDFEEIDLDVPTSPGPPRGKIKSKDLAFIGYTYKRFE 364

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 90.1 bits (224), Expect = 3e-20
 Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 34/181 (18%)

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG---KVYEEVVGT 181
           ++  +  CHS+ ++HRDLKP+N +    D    LK  DFGLA  F  G   + Y   V T
Sbjct: 108 LLQGIAYCHSHRVLHRDLKPQNLLI---DREGALKLADFGLARAF--GVPVRTYTHEVVT 162

Query: 182 PLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAI 230
             Y APE LLG  +Y   +DIWS G I   +++    F  +S            GT    
Sbjct: 163 LWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDED 222

Query: 231 MSREI----DFKS-----------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
           +   +    D+K               P +     DL+ +ML+ DP  +I+    L+HP+
Sbjct: 223 VWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282

Query: 276 L 276
            
Sbjct: 283 F 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 90.1 bits (223), Expect = 4e-20
 Identities = 60/185 (32%), Positives = 84/185 (45%), Gaps = 33/185 (17%)

Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--VYEE 177
           S    ++ A+H CH N I+HRD+KPEN + + +D    LK  DFG A    EG    Y E
Sbjct: 104 SYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND---VLKLCDFGFARNLSEGSNANYTE 160

Query: 178 VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------ 231
            V T  Y +PELL    YGK +D+WS G IL  L  G   F  ES    L  I       
Sbjct: 161 YVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPL 220

Query: 232 -SREID-FKSDP------WPTISSSAK--------------DLIRRMLIRDPNNQITVAQ 269
            + ++  F S+P      +P ++                  DL++ +L  +P ++    Q
Sbjct: 221 PAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQ 280

Query: 270 ILKHP 274
            L HP
Sbjct: 281 CLNHP 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 89.1 bits (221), Expect = 6e-20
 Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 58/264 (21%)

Query: 57  LCRGESGRIYLCTENSTGLQFACKSI---------SKTSKSDEG---------------- 91
           L +G  GR+YLC +  TG + A K +          K   + E                 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 92  ----------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRD 141
                      +  E+  GG++ D++      TE       R ++  +   HSN I+HRD
Sbjct: 70  YGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRD 129

Query: 142 LKPENFIFTTDDENATLKATDFG----LAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +K  N +    D    +K  DFG    L      G   + V GTP +M+PE++    YG+
Sbjct: 130 IKGANIL---RDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGR 186

Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-------ISSSAK 250
           + D+WS G  +  +L+  +P WAE  +  + AI      FK    PT       +S  A+
Sbjct: 187 KADVWSVGCTVVEMLT-EKPPWAE--FEAMAAI------FKIATQPTNPQLPSHVSPDAR 237

Query: 251 DLIRRMLIRDPNNQITVAQILKHP 274
           + +RR  + +   + +  ++L+H 
Sbjct: 238 NFLRRTFVENAKKRPSAEELLRHF 261

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 88.6 bits (220), Expect = 1e-19
 Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 51/218 (23%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNA--------LHACHSNGIMHRDLKPENF 147
           E+CD         D ++Y +     +   +V +        L  CHS+ ++HRDLKP+N 
Sbjct: 79  EYCD--------QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNL 130

Query: 148 IFTTDDENATLKATDFGLAFFFEEG---KVYEEVVGTPLYMAPE-LLGPCKYGKEIDIWS 203
           +      N  LK  DFGLA  F  G   + Y   V T  Y  P+ L G   Y   ID+WS
Sbjct: 131 LINK---NGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 185

Query: 204 AGLILYNLLSGAQPFWAES-----------LYGTLTAI----MSREIDFKSDP------- 241
           AG I   L +  +P +  +           L GT T      +S+  D+K  P       
Sbjct: 186 AGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTS 245

Query: 242 W----PTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
                P ++S+ +DL++ +L+ +P  +I+  + L+HP+
Sbjct: 246 LVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 88.3 bits (219), Expect = 1e-19
 Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 8/160 (5%)

Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGK 173
           ER     F  + +AL   HS  IMHRD+KP N +F T      +K  D GL  FF  +  
Sbjct: 105 ERTIWKYFVQLCSALEHMHSKRIMHRDIKPAN-VFIT--ATGVVKLGDLGLGRFFSSKTT 161

Query: 174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE--SLYGTLTAIM 231
               +VGTP YM+PE +    Y  + DIWS G +LY + +   PF+ +  +LY     I 
Sbjct: 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI- 220

Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
             + D+   P    S   +DL+ R +  DP  +  ++ +L
Sbjct: 221 -EKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVL 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 89.4 bits (222), Expect = 1e-19
 Identities = 67/218 (30%), Positives = 92/218 (42%), Gaps = 48/218 (22%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE-----EVVGTPLYMAP 187
           HS  ++HRDLKP N +   D E   LK  DFGLA  F E          E V T  Y AP
Sbjct: 122 HSANVLHRDLKPGNLLVNADCE---LKICDFGLARGFSENPGENAGFMTEYVATRWYRAP 178

Query: 188 E-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY-----------GTLTA-IMSR- 233
           E +L    Y K ID+WS G IL  LL G +P +    Y           GT     +SR 
Sbjct: 179 EIMLSFQSYTKAIDVWSVGCILAELL-GRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237

Query: 234 -------------EIDFKSDPW--PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY 278
                         I  K      P  +  A DL+ ++L  DP  +I+V + L+HP+L  
Sbjct: 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLA- 296

Query: 279 ENGEAWDRPIDTAIISRVKQF-----RAMSKLKKLALK 311
                W  P D  +  +   F      +M +L+ + ++
Sbjct: 297 ----IWHDPDDEPVCQKPFDFSFESEDSMEELRDMIIE 330

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 89.1 bits (221), Expect = 1e-19
 Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 21/198 (10%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L+  I    R+ E  A      ++  L   H  GI++RDLK +N +    D++
Sbjct: 76  EYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL---DKD 132

Query: 156 ATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
             +K  DFG+       EGK      GTP Y+APE+L   KY + +D WS G++LY +L 
Sbjct: 133 GHIKIADFGMCKENMNGEGKA-STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLI 191

Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPW--PTISSSAKDLIRRMLIRDPNNQITVA-QI 270
           G  PF  E       +I++        P     IS  AKD + ++  RDP  ++ V   I
Sbjct: 192 GQSPFHGEDEDELFDSILN------DRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDI 245

Query: 271 LKHP------WLNYENGE 282
            +HP      W   E  E
Sbjct: 246 RQHPFFRGIDWERLEKRE 263

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 87.7 bits (217), Expect = 1e-19
 Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 11/189 (5%)

Query: 92  YLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF 149
           Y+    C+GG L  ++ ++  +   E      F  +  AL   H   I+HRDLK +N   
Sbjct: 76  YIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL 135

Query: 150 TTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
           T  +    +K  D G+A   E +  +   ++GTP YM+PEL     Y  + D+W+ G  +
Sbjct: 136 TRTN---IIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCV 192

Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPNNQITV 267
           Y + +    F A+     + +++ R I+ K  P P   S    +LI  ML + P  + +V
Sbjct: 193 YEMATLKHAFNAKD----MNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSV 248

Query: 268 AQILKHPWL 276
             IL+ P++
Sbjct: 249 KSILRQPYI 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 88.6 bits (220), Expect = 2e-19
 Identities = 71/286 (24%), Positives = 110/286 (38%), Gaps = 47/286 (16%)

Query: 38  TILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR-- 95
           TI G+ Y           E+  G  G++Y      TG   A K + +T   +E   KR  
Sbjct: 4   TIDGQKYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEE--NKRIL 61

Query: 96  --------EH-------CDG---------------GTLVDRISDRER--YTERAAASVFR 123
                    H       C G                T +D++  R +    E     +  
Sbjct: 62  MDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTV 121

Query: 124 SVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           ++V ALH      G++HRD+KP N +    D +  +K  DFG++    + K      G  
Sbjct: 122 AIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLVDSKAKTRSAGCA 178

Query: 183 LYMAPELLGP----CKYGKEIDIWSAGLILYNLLSGAQPF-WAESLYGTLTAIMSREIDF 237
            YMAPE + P     KY    D+WS G+ L  L +G  P+   ++ +  LT I+  E   
Sbjct: 179 AYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP- 237

Query: 238 KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW-LNYENGE 282
              P    S      +   L +D   +    ++L+HP+   YE  E
Sbjct: 238 SLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETAE 283

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 88.9 bits (221), Expect = 2e-19
 Identities = 59/200 (29%), Positives = 82/200 (41%), Gaps = 50/200 (25%)

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTD-DENATLKATDFGLAFFFEEGKV--YEE--VV 179
           ++N +H  HSN ++HRDLKP N +   +  E   +K  D GLA  F        +   VV
Sbjct: 117 ILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVV 176

Query: 180 GTPLYMAPEL-LGPCKYGKEIDIWSAGLILYNLLS------GAQ-------PFWAESL-- 223
            T  Y APEL LG   Y K IDIW+ G I   LL+      G +       PF  + L  
Sbjct: 177 VTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236

Query: 224 ---------------------YGTLTAIMSREIDFKSDP-------WPTISSSAKDLIRR 255
                                Y TL     +   + S+             S   DL+R+
Sbjct: 237 IFEVLGTPTEKDWPDIKKMPEYDTL-MKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRK 295

Query: 256 MLIRDPNNQITVAQILKHPW 275
           +L  DP  +IT  + L+HP+
Sbjct: 296 LLEYDPTKRITAEEALEHPY 315

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 88.3 bits (219), Expect = 2e-19
 Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 29/173 (16%)

Query: 132 CHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPE-L 189
           CHS+ ++HRDLKP+N +   D     LK  DFGLA  F    + +   V T  Y APE L
Sbjct: 118 CHSHRVLHRDLKPQNLLI--DRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEIL 175

Query: 190 LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREI---- 235
           LG   Y   +DIWS G I   +++    F  +S          + GT        +    
Sbjct: 176 LGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLP 235

Query: 236 DFKSD--PW---------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
           D+KS    W         PT+  +  DL+ +ML  DP+ +IT    L+H +  
Sbjct: 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK 288

Length = 294

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 87.4 bits (216), Expect = 3e-19
 Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 49/261 (18%)

Query: 57  LCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------- 90
           L +G  GR+YLC +  TG + A K +    +S E                          
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69

Query: 91  -GYLK----------REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
            G L+           E+  GG++ D++      TE       R ++  +   HSN I+H
Sbjct: 70  YGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVH 129

Query: 140 RDLKPENFIFTTDDENATLKATDFG----LAFFFEEGKVYEEVVGTPLYMAPELLGPCKY 195
           RD+K  N +    D    +K  DFG    L      G     V GTP +M+PE++    Y
Sbjct: 130 RDIKGANIL---RDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGY 186

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIR 254
           G++ D+WS G  +  +L+  +P WAE  Y  + AI        +   P+ IS  A+D + 
Sbjct: 187 GRKADVWSLGCTVVEMLT-EKPPWAE--YEAMAAIFKIATQPTNPQLPSHISEHARDFLG 243

Query: 255 RMLIRDPNNQITVAQILKHPW 275
            + + +  ++ +  ++L+HP+
Sbjct: 244 CIFV-EARHRPSAEELLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 88.3 bits (219), Expect = 3e-19
 Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 15/191 (7%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  +   GG L  R+S    +TE         +  AL   HS GI++RDLKPEN +   
Sbjct: 74  YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL-- 131

Query: 152 DDENATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILY 209
            DE   +K TDFGL+      E K Y    GT  YMAPE++    + +  D WS G++++
Sbjct: 132 -DEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 189

Query: 210 NLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI---- 265
            +L+G+ PF  +    T+T I+  ++         +S  A+ L+R +  R+P N++    
Sbjct: 190 EMLTGSLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRALFKRNPANRLGAGP 245

Query: 266 -TVAQILKHPW 275
             V +I +HP+
Sbjct: 246 DGVEEIKRHPF 256

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 87.4 bits (217), Expect = 3e-19
 Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 34/186 (18%)

Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEV 178
            +    + A++ CH +  +HRD+KPEN + T   +   +K  DFG A      G  Y + 
Sbjct: 104 KIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQ---IKLCDFGFARILTGPGDDYTDY 160

Query: 179 VGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFW-----AESLY---GTLTA 229
           V T  Y APELL G  +YG  +D+W+ G +   LL+G QP W      + LY    TL  
Sbjct: 161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTG-QPLWPGKSDVDQLYLIRKTLGD 219

Query: 230 IMSREID-------FK-------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           ++ R          FK                +P ISS A   ++  L  DP  +++  +
Sbjct: 220 LIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEE 279

Query: 270 ILKHPW 275
           +L+HP+
Sbjct: 280 LLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 87.2 bits (216), Expect = 4e-19
 Identities = 63/249 (25%), Positives = 102/249 (40%), Gaps = 48/249 (19%)

Query: 57  LCRGESGRIYLCTENSTGLQFACKSISKTS-KSDEGY---------LKREHC-------- 98
           L +G  G +  C   +TG  +ACK + K   K  +G          L++           
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60

Query: 99  ---------------DGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRD 141
                          +GG L   I +        A ++F +  ++  L   H   I++RD
Sbjct: 61  AFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRD 120

Query: 142 LKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDI 201
           LKPEN +    D++  ++ +D GLA   + GK  +   GTP YMAPE+L    Y   +D 
Sbjct: 121 LKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDW 177

Query: 202 WSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID--FKSDP--WP-TISSSAKDLIRRM 256
           ++ G  LY +++G  PF           +   E+          +P   S  AKDL   +
Sbjct: 178 FALGCTLYEMIAGRSPFRQRK-----EKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEAL 232

Query: 257 LIRDPNNQI 265
           L +DP  ++
Sbjct: 233 LQKDPEKRL 241

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 87.1 bits (216), Expect = 4e-19
 Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 34/186 (18%)

Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG---KVYE 176
           S    ++  +  CHS  ++HRDLKP+N +    D    +K  DFGLA  F  G   +VY 
Sbjct: 105 SYLYQILQGILFCHSRRVLHRDLKPQNLLI---DNKGVIKLADFGLARAF--GIPVRVYT 159

Query: 177 EVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYG 225
             V T  Y APE LLG  +Y   +DIWS G I   + +    F  +S          + G
Sbjct: 160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILG 219

Query: 226 TLTAIMSREI----DFKSD--PW---------PTISSSAKDLIRRMLIRDPNNQITVAQI 270
           T T  +   +    D+K+    W           +     DL+ +MLI DP  +I+  + 
Sbjct: 220 TPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKA 279

Query: 271 LKHPWL 276
           L HP+ 
Sbjct: 280 LNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 86.6 bits (214), Expect = 4e-19
 Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 11/184 (5%)

Query: 92  YLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E+CDGG L+ +I  +  + + E      F  +   +   H   ++HRD+K +N   
Sbjct: 74  YIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL 133

Query: 150 TTDDENATLKATDFGLAFFFEEGKVYE-EVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
           T   +N  +K  DFG A        Y    VGTP Y+ PE+     Y  + DIWS G IL
Sbjct: 134 T---QNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCIL 190

Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPNNQITV 267
           Y L +   PF A S    +  +          P P+  S   + LI++M  R+P ++ + 
Sbjct: 191 YELCTLKHPFQANSWKNLILKVCQGSY----KPLPSHYSYELRSLIKQMFKRNPRSRPSA 246

Query: 268 AQIL 271
             IL
Sbjct: 247 TTIL 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 86.0 bits (213), Expect = 5e-19
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 9/184 (4%)

Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E+ + G L   +  +      E      F  ++  L   HS  I+HRD+K  N      D
Sbjct: 79  EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD 138

Query: 154 ENATLKATDFGLAFFFEEGKVYEE-VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLL 212
               +K  D G+A    +   +   +VGTP Y++PEL     Y ++ D+W+ G++LY   
Sbjct: 139 N---VKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECC 195

Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
           +G  PF A +    +  I+       S  +   S     LI + L +D   +    Q+L+
Sbjct: 196 TGKHPFDANNQGALILKIIRGVFPPVSQMY---SQQLAQLIDQCLTKDYRQRPDTFQLLR 252

Query: 273 HPWL 276
           +P L
Sbjct: 253 NPSL 256

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 85.9 bits (212), Expect = 7e-19
 Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 61/265 (23%)

Query: 57  LCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------- 90
           L +G  GR+YLC +  TG + A K +    +S E                          
Sbjct: 10  LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69

Query: 91  -GYLK----------REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
            G L+           EH  GG++ D++      TE       R ++  +   HSN I+H
Sbjct: 70  YGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVH 129

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFE----EGKVYEEVVGTPLYMAPELLGPCKY 195
           RD+K  N +    D    +K  DFG +   +     G   + V GTP +M+PE++    Y
Sbjct: 130 RDIKGANIL---RDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGY 186

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-------ISSS 248
           G++ DIWS G  +  +L+  +P WAE  +  + AI      FK    PT       +S  
Sbjct: 187 GRKADIWSVGCTVVEMLT-EKPPWAE--FEAMAAI------FKIATQPTNPVLPPHVSDH 237

Query: 249 AKDLIRRMLIRDPNNQITVAQILKH 273
            +D ++R+ + +   + +  ++L+H
Sbjct: 238 CRDFLKRIFV-EAKLRPSADELLRH 261

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 86.0 bits (213), Expect = 8e-19
 Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 14/189 (7%)

Query: 89  DEGYLKREHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNG-IMHRDLK 143
           D  Y+  +  +G  L +  +     ++R+TE    ++F  +V AL   H    I+HRDL 
Sbjct: 82  DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLT 141

Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWS 203
           P N +   DD+   +  TDFGLA   +       VVGT LY  PE++    YG++ D+W+
Sbjct: 142 PNNIMLGEDDK---VTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWA 198

Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP--TISSSAKDLIRRMLIRDP 261
            G ILY + +   PF++ ++    T I    ++   +P P    S    D+I   L  D 
Sbjct: 199 FGCILYQMCTLQPPFYSTNMLSLATKI----VEAVYEPLPEGMYSEDVTDVITSCLTPDA 254

Query: 262 NNQITVAQI 270
             +  + Q+
Sbjct: 255 EARPDIIQV 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 87.2 bits (217), Expect = 8e-19
 Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 39/192 (20%)

Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE---- 176
           +   ++ AL   HS  ++HRDLKP N +  +D     +K  DFGLA    E +       
Sbjct: 112 IMYQLLKALKYIHSGNVIHRDLKPSNILLNSD---CRVKLADFGLARSLSELEENPENPV 168

Query: 177 --EVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA------------- 220
             + V T  Y APE LLG  +Y K +D+WS G IL  +L G +P +              
Sbjct: 169 LTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLG-KPLFPGTSTLNQLEKIIE 227

Query: 221 ----------ESLYGTLTAIM-----SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
                     ES+     A M     SR      +  P  S  A DL++++L+ +PN ++
Sbjct: 228 VIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRL 287

Query: 266 TVAQILKHPWLN 277
           T  + L+HP++ 
Sbjct: 288 TAEEALEHPYVA 299

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 86.3 bits (214), Expect = 8e-19
 Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 26/198 (13%)

Query: 96  EHCDGGTLVDRISDR-----ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           E+C+GG+L D I  +      R  E+    +  SV+  L   HS  I+HRD+KP N + T
Sbjct: 81  EYCEGGSL-DSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT 139

Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAGL 206
                  +K  DFG++     G++   +     GT  YMAPE +    Y    D+WS GL
Sbjct: 140 R---KGQVKLCDFGVS-----GELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGL 191

Query: 207 ILYNLLSGAQPFWAESLYGT-----LTAIMSREI-DFKSDPWPTI--SSSAKDLIRRMLI 258
            L  +     PF  E          L+ I++    + K +P   I  S   KD I++ L 
Sbjct: 192 TLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLE 251

Query: 259 RDPNNQITVAQILKHPWL 276
           +DP  + T   +L+HPW+
Sbjct: 252 KDPTRRPTPWDMLEHPWI 269

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 87.0 bits (215), Expect = 8e-19
 Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 9/172 (5%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDDE 154
           E+ +GG L   +S    ++E  A      +V+AL   HS   +++RDLK EN +    D+
Sbjct: 75  EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DK 131

Query: 155 NATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
           +  +K TDFGL     ++G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ 
Sbjct: 132 DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 191

Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           G  PF+ +        I+  EI F      T+S  AK L+  +L +DP  ++
Sbjct: 192 GRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSLLSGLLKKDPKQRL 239

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 85.4 bits (211), Expect = 1e-18
 Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 10/189 (5%)

Query: 92  YLKREHCDGGTLVDRISDRER---YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           ++  E+CDGG L+ RI +R+R   ++E    S F  +   L   H   I+HRD+K +N  
Sbjct: 75  FIVMEYCDGGDLMKRI-NRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIF 133

Query: 149 FTTDDENATLKATDFGLAFFFEEG-KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            + +   A L   DFG+A    +  ++    VGTP Y++PE+     Y  + DIWS G +
Sbjct: 134 LSKNGMVAKLG--DFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCV 191

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           LY L +   PF   +L+  +  I        S   P  S   + LI ++    P ++ ++
Sbjct: 192 LYELCTLKHPFEGNNLHQLVLKICQGYFAPIS---PNFSRDLRSLISQLFKVSPRDRPSI 248

Query: 268 AQILKHPWL 276
             ILK P+L
Sbjct: 249 TSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 85.8 bits (212), Expect = 2e-18
 Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 14/193 (7%)

Query: 74  GLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACH 133
           GL F+ ++  K       Y   ++ +GG L   +     + E  A      + +AL   H
Sbjct: 60  GLHFSFQTADKL------YFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH 113

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGP 192
           S  I++RDLKPEN +    D    +  TDFGL     E         GTP Y+APE+L  
Sbjct: 114 SLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHK 170

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
             Y + +D W  G +LY +L G  PF++ +       I+++ +  K    P I++SA+ L
Sbjct: 171 QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHL 226

Query: 253 IRRMLIRDPNNQI 265
           +  +L +D   ++
Sbjct: 227 LEGLLQKDRTKRL 239

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 84.8 bits (210), Expect = 2e-18
 Identities = 54/172 (31%), Positives = 75/172 (43%), Gaps = 32/172 (18%)

Query: 132 CHSNGIMHRDLKPENFIFTTDDENATLKATDFGL--AFFFEEGKVYEEVVGTPLYMAPE- 188
           CH N ++HRDLKP+N +     E   LK  DFGL  AF         EVV T  Y AP+ 
Sbjct: 116 CHENRVLHRDLKPQNLLINKRGE---LKLADFGLARAFGIPVNTFSNEVV-TLWYRAPDV 171

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA------------------ESLYGTLTAI 230
           LLG   Y   IDIWS G I+  +++G   F                    ES +  ++ +
Sbjct: 172 LLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQL 231

Query: 231 MSREIDFKSDP-------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
              +  F   P       +P       DL+ R+L  +P  +I+    L+HPW
Sbjct: 232 PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPW 283

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 85.6 bits (212), Expect = 2e-18
 Identities = 60/184 (32%), Positives = 85/184 (46%), Gaps = 41/184 (22%)

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE----VVG 180
           ++  L   HS G++HRDLKP N +    +EN  LK  DFGLA      ++ +      V 
Sbjct: 117 ILRGLKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLA------RIQDPQMTGYVS 167

Query: 181 TPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGT--- 226
           T  Y APE +L   KY  E+DIWSAG I   +L G   F  +           L GT   
Sbjct: 168 TRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPD 227

Query: 227 --------------LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                         + ++  RE    S+ +     SA DL+ +ML+ DP  +I+ A+ L 
Sbjct: 228 DVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287

Query: 273 HPWL 276
           HP+L
Sbjct: 288 HPYL 291

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 85.0 bits (210), Expect = 3e-18
 Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 14/207 (6%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E  +GG L+  I D+ R+    A      +V  L   HS GI++RDLK +N +    D +
Sbjct: 76  EFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML---DRD 132

Query: 156 ATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
             +K  DFG+     F + +      GTP Y+APE+L   KY   +D WS G++LY +L 
Sbjct: 133 GHIKIADFGMCKENVFGDNRA-STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLI 191

Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPNNQI-TVAQIL 271
           G  PF     +G     +   I   +  +P  I+  +KD++ ++  RDP  ++  V  I 
Sbjct: 192 GQSPF-----HGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIR 246

Query: 272 KHPWLNYENGEAWD-RPIDTAIISRVK 297
            HP+    N  A + R +D     +VK
Sbjct: 247 GHPFFKTINWTALEKRELDPPFKPKVK 273

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 85.2 bits (211), Expect = 4e-18
 Identities = 58/231 (25%), Positives = 93/231 (40%), Gaps = 51/231 (22%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y   ++  GG ++  +     + E  A      +  A+ + H  G +HRD+KP+N +   
Sbjct: 77  YFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI-- 134

Query: 152 DDENATLKATDFGLAFFFE---EGKVYEE------------------------------- 177
            D +  +K TDFGL   F    + K Y++                               
Sbjct: 135 -DRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRK 193

Query: 178 ----------VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTL 227
                     +VGTP Y+APE+L    Y +  D WS G+ILY +L G  PF A++   T 
Sbjct: 194 RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQ 253

Query: 228 TAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI---TVAQILKHPW 275
             +++ E          +S  A DLI R L     +++      +I  HP+
Sbjct: 254 LKVINWETTLHIPSQAKLSREASDLILR-LCCGAEDRLGKNGADEIKAHPF 303

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 86.1 bits (213), Expect = 5e-18
 Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 15/187 (8%)

Query: 96  EHCDGGTLVDRISDRER----YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           ++ + G L   I  R +    + E  A  +F  V+ A+H  HS  ++HRD+K  N +  +
Sbjct: 119 DYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS 178

Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
              N  +K  DFG +  +       V     GTP Y+APE+     Y K+ D++S G++L
Sbjct: 179 ---NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLL 235

Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP-TISSSAKDLIRRMLIRDPNNQITV 267
           Y LL+  +PF  E++      +M + +  + DP P +IS   ++++  +L  DP  + + 
Sbjct: 236 YELLTLKRPFDGENME----EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSS 291

Query: 268 AQILKHP 274
           +++L  P
Sbjct: 292 SKLLNMP 298

Length = 496

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 84.1 bits (208), Expect = 5e-18
 Identities = 59/195 (30%), Positives = 81/195 (41%), Gaps = 36/195 (18%)

Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF--E 170
           ++E    S  + ++  L+ CH    +HRD+K  N +     +   +K  DFGLA  +  E
Sbjct: 113 FSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQ---IKLADFGLARLYNSE 169

Query: 171 EGKVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTA 229
           E + Y   V T  Y  PELL G  +YG  ID+WS G IL  L +    F A      L  
Sbjct: 170 ESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLEL 229

Query: 230 IMSREIDFKSDP--WPT--------------------------ISSSAKDLIRRMLIRDP 261
           I SR +     P  WP                           I + A DL+  ML  DP
Sbjct: 230 I-SR-LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDP 287

Query: 262 NNQITVAQILKHPWL 276
           + + T  + L  PWL
Sbjct: 288 SKRCTAEEALNSPWL 302

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 84.7 bits (210), Expect = 6e-18
 Identities = 72/216 (33%), Positives = 96/216 (44%), Gaps = 43/216 (19%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPE-LL 190
           HS GI+HRDLKP N     D E   LK  DFGLA   + E   Y   V T  Y APE +L
Sbjct: 135 HSAGIIHRDLKPSNIAVNEDCE---LKILDFGLARHTDDEMTGY---VATRWYRAPEIML 188

Query: 191 GPCKYGKEIDIWSAGLILYNLLSGAQPFWAE----------SLYGT-----LTAIMSREI 235
               Y + +DIWS G I+  LL+G   F             +L GT     L  I S   
Sbjct: 189 NWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESA 248

Query: 236 -------------DFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL---NYE 279
                        DFK + +   +  A DL+ +ML+ DP+ +IT A+ L HP+L   +  
Sbjct: 249 RNYIQSLPQMPKKDFK-EVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP 307

Query: 280 NGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVE 315
             E    P D +  SR      + + K+L  K I+ 
Sbjct: 308 EDEPVAPPYDQSFESRD---LTVDEWKELVYKEIMN 340

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 84.8 bits (210), Expect = 6e-18
 Identities = 64/175 (36%), Positives = 82/175 (46%), Gaps = 34/175 (19%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF--FEEGKVYEEVVGTPLYMAPELL 190
           HS GI+HRD+KP N +  +   N  LK  DFGLA     +E K   + V T  Y APE+L
Sbjct: 120 HSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEIL 176

Query: 191 -GPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGT--LTAIMS----- 232
            G   Y   +DIWS G I   LL     F A+S          L GT  L A+ S     
Sbjct: 177 MGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA 236

Query: 233 REIDFKSDPWP-------TISS----SAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           R    +    P       T+SS     A  L+ RML+ DP+ +I+ A  L HP+L
Sbjct: 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYL 291

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 83.8 bits (207), Expect = 7e-18
 Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 11/190 (5%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL     +GG L   +    R+    A      ++ AL   H   +++RDLKPEN +   
Sbjct: 69  YLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL-- 126

Query: 152 DDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
            D    +   DFGL     ++        GTP Y+APELL    Y K +D W+ G++LY 
Sbjct: 127 -DYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYE 185

Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVA-- 268
           +L+G  PF+ E++      I+   + F           AKDL+  +L RDP  ++     
Sbjct: 186 MLTGLPPFYDENVNEMYRKILQEPLRFPDG----FDRDAKDLLIGLLSRDPTRRLGYNGA 241

Query: 269 -QILKHPWLN 277
            +I  HP+ +
Sbjct: 242 QEIKNHPFFS 251

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 83.7 bits (207), Expect = 1e-17
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 12/180 (6%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D  Y   E+ +GG L+  I    ++ E  A      +   L   HS GI++RDLK +N +
Sbjct: 74  DRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVM 133

Query: 149 FTTDDENATLKATDFGLA---FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAG 205
               D    +K  DFG+     F   GK      GTP Y+APE++    YGK +D W+ G
Sbjct: 134 L---DAEGHIKIADFGMCKENIF--GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFG 188

Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           ++LY +L+G  PF  E       +IM   + +      ++S  A  + + +L + P  ++
Sbjct: 189 VLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLLTKHPAKRL 244

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 83.5 bits (206), Expect = 1e-17
 Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 18/219 (8%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L+  I    ++    A      ++  L   HS GI++RDLK +N +  TD   
Sbjct: 76  EYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGH- 134

Query: 156 ATLKATDFGLAFFFEEGKVYE----EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
             +K  DFG+    +E  + +       GTP Y+APE+L   KY   +D WS G++LY +
Sbjct: 135 --IKIADFGMC---KENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEM 189

Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPNNQITV-AQ 269
           L G  PF     +G     + + I   +  +P  ++  AKD++ ++ +R+P  ++ V   
Sbjct: 190 LIGQSPF-----HGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGD 244

Query: 270 ILKHPWLNYEN-GEAWDRPIDTAIISRVKQFRAMSKLKK 307
           I +HP+    +     +R I+     +VK     S   K
Sbjct: 245 IRQHPFFREIDWSALEEREIEPPFKPKVKSANDCSNFDK 283

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 82.3 bits (204), Expect = 1e-17
 Identities = 60/200 (30%), Positives = 86/200 (43%), Gaps = 31/200 (15%)

Query: 103 LVDRISDRERY-TERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKAT 161
           L + I  R+R   E+   S    ++ +L   H NGI HRD+KPEN I   DD    LK  
Sbjct: 86  LYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPEN-ILIKDD---ILKLA 141

Query: 162 DFGLAFFFEEGKVYEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA 220
           DFG          Y E + T  Y APE LL    YG ++DIW+ G + + +LS    F  
Sbjct: 142 DFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPG 201

Query: 221 ESLYGTLTAIM------SREIDFKSDPW-------------------PTISSSAKDLIRR 255
            +    +  I         E+  K                       P  S+   DL+++
Sbjct: 202 TNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKK 261

Query: 256 MLIRDPNNQITVAQILKHPW 275
           +L  DP+ +IT  Q L+HP+
Sbjct: 262 LLAYDPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 82.4 bits (204), Expect = 3e-17
 Identities = 60/181 (33%), Positives = 78/181 (43%), Gaps = 40/181 (22%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-----FFFEEGKVYEEVVGTPLYMAP 187
           HS  ++HRDLKP N +    +E+  L+  DFG+A        E      E V T  Y AP
Sbjct: 124 HSANVIHRDLKPSNLLV---NEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAP 180

Query: 188 ELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS----------REID 236
           ELL    +Y   ID+WS G I   +L   Q F  ++    L  I+S            I 
Sbjct: 181 ELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRI- 239

Query: 237 FKSD---------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
             SD               PW    P  S  A DL+ +ML  DP  +ITV Q L+HP+L 
Sbjct: 240 -GSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA 298

Query: 278 Y 278
            
Sbjct: 299 Q 299

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 82.0 bits (203), Expect = 3e-17
 Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 35/214 (16%)

Query: 92  YLKREHC--DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF 149
           +L  E+C  D  +L+D +     ++E     +   ++  L   H N I+HRDLK  N + 
Sbjct: 84  FLVMEYCEQDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL 141

Query: 150 TTDDENATLKATDFGLAFFFEE-GKVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLI 207
           T   +   LK  DFGLA  +    K     V T  Y APELL G   Y   ID+W+ G I
Sbjct: 142 T---DKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCI 198

Query: 208 LYNLLSGAQPFWAES----------LYGT--------LTAI-MSREIDFKSDPW------ 242
           L  LL+       +S          L GT         + + +  +      P+      
Sbjct: 199 LAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHK 258

Query: 243 -PTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
            P +S +   L+  +L+ DP  + T  + L+  +
Sbjct: 259 FPWLSEAGLRLLNFLLMYDPKKRATAEEALESSY 292

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 82.5 bits (204), Expect = 3e-17
 Identities = 61/214 (28%), Positives = 85/214 (39%), Gaps = 49/214 (22%)

Query: 107 ISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA 166
           +  + R TE     +   ++N L+  H    MHRDL P N IF         K  DFGLA
Sbjct: 110 VDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPAN-IFINS--KGICKIADFGLA 166

Query: 167 FFF------------EEGKVYEEV---VGTPLYMAPELL-GPCKYGKEIDIWSAGLILYN 210
             +            E  +  EE+   V T  Y APELL G  KY   +D+WS G I   
Sbjct: 167 RRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAE 226

Query: 211 LLSGAQPF-----------------------WAES----LYGTLTAIMSREIDFKSDPWP 243
           LL+G   F                       W ++    LY   T    +  D K   +P
Sbjct: 227 LLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPK--DLK-TIFP 283

Query: 244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
             S  A DL++ +L  +P  +I+  + LKH +  
Sbjct: 284 NASDDAIDLLQSLLKLNPLERISAKEALKHEYFK 317

Length = 335

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 81.4 bits (201), Expect = 3e-17
 Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 34/180 (18%)

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG---KVYEEVVGT 181
           ++  L  CHS+ ++HRDLKP+N +    +    +K  DFGLA  F  G   + Y   V T
Sbjct: 109 LLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF--GVPVRTYTHEVVT 163

Query: 182 PLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI---------- 230
             Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I          
Sbjct: 164 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 223

Query: 231 ----MSREIDFKSD--PW---------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
               ++   D+K     W         P +    +DL+ +ML  DPN +I+    L HP+
Sbjct: 224 VWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 81.4 bits (201), Expect = 4e-17
 Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 29/209 (13%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNA-------LHACHSNGIMHRDLKP 144
           Y+  E+ D G+L D++      TE     V R +  A       L   H+  I+HRD+KP
Sbjct: 75  YMCMEYMDAGSL-DKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN--IIHRDVKP 131

Query: 145 ENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE---LLGPCK---YGKE 198
            N +      N  +K  DFG++       + +  +G   YMAPE     GP +   Y  +
Sbjct: 132 TNVLVNG---NGQVKLCDFGVSGNLV-ASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQ 187

Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----SSSAKDLIR 254
            D+WS GL +  +  G  P+  E+ Y  + A +S  +D   DP PT+    S  A+D + 
Sbjct: 188 SDVWSLGLSILEMALGRYPYPPET-YANIFAQLSAIVD--GDP-PTLPSGYSDDAQDFVA 243

Query: 255 RMLIRDPNNQITVAQILKHPWL-NYENGE 282
           + L + PN + T AQ+L+HPWL  Y+N +
Sbjct: 244 KCLNKIPNRRPTYAQLLEHPWLVKYKNAD 272

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 80.6 bits (199), Expect = 4e-17
 Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 11/189 (5%)

Query: 92  YLKREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF 149
           Y+  ++C+GG L  +I+ +    + E      F  +  AL   H   I+HRD+K +N IF
Sbjct: 75  YIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQN-IF 133

Query: 150 TTDDENATLKATDFGLAFFFEEG-KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
            T D   T+K  DFG+A       ++    +GTP Y++PE+     Y  + DIW+ G +L
Sbjct: 134 LTKD--GTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVL 191

Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPNNQITV 267
           Y + +    F A    G +  ++ + I     P  +  S   ++L+ ++  R+P ++ +V
Sbjct: 192 YEMCTLKHAFEA----GNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSV 247

Query: 268 AQILKHPWL 276
             IL+  ++
Sbjct: 248 NSILEKNFI 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 81.4 bits (201), Expect = 5e-17
 Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 14/181 (7%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D+ Y   ++ +GG L   +     + E  A      + +AL   HS  I++RDLKPEN +
Sbjct: 69  DKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENIL 128

Query: 149 FTTDDENATLKATDFGLAFFFEEG----KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSA 204
               D    +  TDFGL    +EG    K      GTP Y+APE+L    Y + +D W  
Sbjct: 129 L---DSQGHVVLTDFGLC---KEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCL 182

Query: 205 GLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQ 264
           G +LY +L G  PF++         I+++ +  K    P IS SA+ L+  +L +D   +
Sbjct: 183 GAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK----PNISVSARHLLEGLLQKDRTKR 238

Query: 265 I 265
           +
Sbjct: 239 L 239

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 80.4 bits (198), Expect = 6e-17
 Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 12/186 (6%)

Query: 96  EHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           E+C+G  L  ++ +     +  +E      F  ++  +H  H   I+HRDLK +N IF  
Sbjct: 82  EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKN-IFL- 139

Query: 152 DDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
             +N  LK  DFG++        +     GTP YM+PE L    Y  + DIWS G ILY 
Sbjct: 140 --KNNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYE 197

Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           +   A  F  ++    +  I+  E    S P  T S     +++ ML +DP+ + + A+I
Sbjct: 198 MCCLAHAFEGQNFLSVVLRIV--EGPTPSLP-ETYSRQLNSIMQSMLNKDPSLRPSAAEI 254

Query: 271 LKHPWL 276
           L++P++
Sbjct: 255 LRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 81.6 bits (201), Expect = 6e-17
 Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 43/224 (19%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E   GG ++  +  ++  +E A        V A+ A H  G +HRD+KP+N +   
Sbjct: 77  YLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL-- 134

Query: 152 DDENATLKATDFGLA----------------------FFFE--------------EGKVY 175
            D    +K +DFGL                       F F+                ++ 
Sbjct: 135 -DAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLA 193

Query: 176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI 235
              VGTP Y+APE+     Y K  D WS G+I+Y +L G  PF +E+   T   +M+ + 
Sbjct: 194 YSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKE 253

Query: 236 DFKSDPWPTISSSAKDLIRRMLIRDPNNQI---TVAQILKHPWL 276
                P   IS  AKDLI R    D  N+I    V +I  HP+ 
Sbjct: 254 TLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFF 296

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 80.4 bits (199), Expect = 7e-17
 Identities = 66/281 (23%), Positives = 107/281 (38%), Gaps = 68/281 (24%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------- 90
           F + E +  G  G++Y      TG   A K +      +E                    
Sbjct: 8   FELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIAT 67

Query: 91  ---GYLKR-------------EHCDGGTLVD-----RISDRERYTERAAASVFRSVVNAL 129
               ++K+             E C GG++ D     R   + R  E   A + R  +  L
Sbjct: 68  FYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGK-RLKEEWIAYILRETLRGL 126

Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF--EEGKVYEEVVGTPLYMAP 187
              H N ++HRD+K +N + T   +NA +K  DFG++       G+     +GTP +MAP
Sbjct: 127 AYLHENKVIHRDIKGQNILLT---KNAEVKLVDFGVSAQLDSTLGR-RNTFIGTPYWMAP 182

Query: 188 ELLGPCK------YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP 241
           E++  C       Y    D+WS G+    L  G  P         L  I         +P
Sbjct: 183 EVIA-CDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIP-------RNP 234

Query: 242 WPTISSSAK------DLIRRMLIRDPNNQITVAQILKHPWL 276
            PT+ S         D I   LI++   +  + ++L+HP++
Sbjct: 235 PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 81.0 bits (200), Expect = 7e-17
 Identities = 50/188 (26%), Positives = 94/188 (50%), Gaps = 15/188 (7%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L+ +I    ++ E  +      V  AL   H +G+++RDLK +N +    D  
Sbjct: 76  EYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAE 132

Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
              K  DFG+       G       GTP Y+APE+L   +YG  +D W+ G+++Y +++G
Sbjct: 133 GHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAG 192

Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI--TVAQ--- 269
             PF A++      +I+  ++ +    W  +S  A  +++  + ++PN ++    +Q   
Sbjct: 193 QPPFEADNEDDLFESILHDDVLYPV--W--LSKEAVSILKAFMTKNPNKRLGCVASQGGE 248

Query: 270 --ILKHPW 275
             I +HP+
Sbjct: 249 DAIKQHPF 256

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 80.5 bits (199), Expect = 1e-16
 Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 17/171 (9%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+  GG L+  I   + ++E  A      VV  L   H N I++RDLK +N +  T+   
Sbjct: 82  EYAAGGDLMMHIH-TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTE--- 137

Query: 156 ATLKATDFGLAFFFEEGKVYEEVV----GTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
             +K  DFGL    +EG  + +      GTP ++APE+L    Y + +D W  G+++Y +
Sbjct: 138 GFVKIADFGLC---KEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEM 194

Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWP-TISSSAKDLIRRMLIRDP 261
           L G  PF  +       +I++ E+      +P  +S  A  ++RR+L R+P
Sbjct: 195 LVGESPFPGDDEEEVFDSIVNDEV-----RYPRFLSREAISIMRRLLRRNP 240

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 79.3 bits (195), Expect = 1e-16
 Identities = 67/266 (25%), Positives = 110/266 (41%), Gaps = 61/266 (22%)

Query: 57  LCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------- 90
           L RG  G +YLC +  TG + A K +     S E                          
Sbjct: 10  LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQY 69

Query: 91  -GYLKR----------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
            G L+           E+  GG++ D++      TE       R ++  +   HSN I+H
Sbjct: 70  YGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVH 129

Query: 140 RDLKPENFIFTTDDENATLKATDFG----LAFFFEEGKVYEEVVGTPLYMAPELLGPCKY 195
           RD+K  N +    D    +K  DFG    +      G   + V GTP +M+PE++    Y
Sbjct: 130 RDIKGANIL---RDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGY 186

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-------ISSS 248
           G++ D+WS    +  +L+  +P WAE  Y  + AI      FK    PT       +S +
Sbjct: 187 GRKADVWSVACTVVEMLT-EKPPWAE--YEAMAAI------FKIATQPTKPMLPDGVSDA 237

Query: 249 AKDLIRRMLIRDPNNQITVAQILKHP 274
            +D ++++ + +   + T   +L+HP
Sbjct: 238 CRDFLKQIFVEE-KRRPTAEFLLRHP 262

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 80.0 bits (197), Expect = 2e-16
 Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 14/173 (8%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y   ++ +GG L   +     + E  A      V +A+   HS  I++RDLKPEN +   
Sbjct: 72  YFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL-- 129

Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVV----GTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            D    +  TDFGL    +EG   EE      GTP Y+APE+L    Y + +D W  G +
Sbjct: 130 -DSQGHVVLTDFGLC---KEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAV 185

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           LY +L G  PF++  +      I+ + +          + +A DL+  +L +D
Sbjct: 186 LYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGLLHKD 234

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 79.4 bits (196), Expect = 2e-16
 Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 10/184 (5%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG+ V  +       E+  + + R V+ AL   H  G++HRD+K  N + T     
Sbjct: 82  EYAEGGS-VRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTN---T 137

Query: 156 ATLKATDFGLAFFFEEGKVYEEV-VGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLS 213
             +K  DFG+A    +        VGTP +MAPE +     Y  + DIWS G+ +Y + +
Sbjct: 138 GNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMAT 197

Query: 214 GAQPFWAESLYGTLTAIM-SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
           G  P+     +  +  I  S+    + + +   S   ++ +   L  +P  +++  ++LK
Sbjct: 198 GNPPYSDVDAFRAMMLIPKSKPPRLEDNGY---SKLLREFVAACLDEEPKERLSAEELLK 254

Query: 273 HPWL 276
             W+
Sbjct: 255 SKWI 258

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 80.0 bits (197), Expect = 2e-16
 Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 18/198 (9%)

Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +++ Y   +  +GG L   +     + E  A      + +AL   HS  I++RDLKPEN 
Sbjct: 68  TEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENI 127

Query: 148 IFTTDDENATLKATDFGLAFFFEEGKVYEEVV----GTPLYMAPELLGPCKYGKEIDIWS 203
           +    D    +  TDFGL    +EG    +      GTP Y+APE++    Y   +D W 
Sbjct: 128 LL---DSQGHVVLTDFGLC---KEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWC 181

Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
            G +LY +L G  PF+   +      I+ + +  +    P  S +A  ++  +L +D   
Sbjct: 182 LGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEELLEKDRQR 237

Query: 264 QITVA----QILKHPWLN 277
           ++       +I +HP+  
Sbjct: 238 RLGAKEDFLEIQEHPFFE 255

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 80.1 bits (198), Expect = 2e-16
 Identities = 61/192 (31%), Positives = 85/192 (44%), Gaps = 44/192 (22%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           HS GI+HRDLKP N +  +D    TLK  DFGLA       +    V T  Y APE++  
Sbjct: 135 HSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 191

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPF--------WAE--SLYGTLTAI-MSR-------- 233
             Y + +DIWS G I+  ++ G   F        W +     GT +   MSR        
Sbjct: 192 MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNY 251

Query: 234 ------------EIDFKSDPWPTISSS--------AKDLIRRMLIRDPNNQITVAQILKH 273
                       E  F    +P  S S        A+DL+ +ML+ DP  +I+V   L+H
Sbjct: 252 VENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311

Query: 274 PWLN--YENGEA 283
           P++N  Y+  E 
Sbjct: 312 PYINVWYDPSEV 323

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 79.9 bits (197), Expect = 3e-16
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 43/202 (21%)

Query: 96  EHCDGGTLVD-RISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           E  DGG+L    I+D     E+  A V R +++ +   H   I+HRD+KP N +    + 
Sbjct: 152 EFMDGGSLEGTHIAD-----EQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI---NS 203

Query: 155 NATLKATDFGLAFFFEEGKVYEEV-------VGTPLYMAPEL----LGPCKY-GKEIDIW 202
              +K  DFG+       ++  +        VGT  YM+PE     L    Y G   DIW
Sbjct: 204 AKNVKIADFGV------SRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIW 257

Query: 203 SAGLILYNLLSGAQPF-------WAESLYGTLTAI-MSREIDFKSDPWPTISSSAKDLIR 254
           S G+ +     G  PF       WA SL   + AI MS+      +   T S   +  I 
Sbjct: 258 SLGVSILEFYLGRFPFGVGRQGDWA-SL---MCAICMSQ----PPEAPATASREFRHFIS 309

Query: 255 RMLIRDPNNQITVAQILKHPWL 276
             L R+P  + +  Q+L+HP++
Sbjct: 310 CCLQREPAKRWSAMQLLQHPFI 331

Length = 353

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 79.3 bits (195), Expect = 3e-16
 Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 13/204 (6%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D  Y   E+ +GG L+ +I    R+ E  A      +   L   HS GI++RDLK +N +
Sbjct: 74  DRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVM 133

Query: 149 FTTDDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
               D    +K  DFG+      +G   +   GTP Y+APE++    YGK +D W+ G++
Sbjct: 134 L---DSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 190

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           LY +L+G  PF  E       +IM   + +      ++S  A  + + ++ + P  ++  
Sbjct: 191 LYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGC 246

Query: 268 A-----QILKHPWLNYENGEAWDR 286
                  I +H +  Y + E  +R
Sbjct: 247 GPEGERDIKEHAFFRYIDWEKLER 270

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 78.9 bits (194), Expect = 3e-16
 Identities = 62/238 (26%), Positives = 88/238 (36%), Gaps = 44/238 (18%)

Query: 71  NSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAA---------SV 121
           N   L   C + S+T +  +  L  EH D         D   Y ++             +
Sbjct: 63  NIVRLMDVCAT-SRTDRETKVTLVFEHVD--------QDLRTYLDKVPPPGLPAETIKDL 113

Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
            R  +  L   H+N I+HRDLKPEN + T+      +K  DFGLA  +        VV T
Sbjct: 114 MRQFLRGLDFLHANCIVHRDLKPENILVTS---GGQVKLADFGLARIYSCQMALTPVVVT 170

Query: 182 PLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP 241
             Y APE+L    Y   +D+WS G I   +      F   S    L  I         D 
Sbjct: 171 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 230

Query: 242 WPT-----------------------ISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           WP                        I  S   L+  ML  +P+ +I+  + L+HP+ 
Sbjct: 231 WPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 78.3 bits (193), Expect = 3e-16
 Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 15/200 (7%)

Query: 86  SKSDEGYLK--REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           S  D  +L    E+  GG++   +++   + E    +  R ++  L+  H+ GI+HRD+K
Sbjct: 74  SSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIK 133

Query: 144 PENFIFTTDDENATLKATDFGLAFFFEE-------GKVYEEVVGTPLYMAPELLGPCKYG 196
             N +    D    +K +DFG++   E              + G+  +MAPE++    Y 
Sbjct: 134 GANILV---DNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYT 190

Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM 256
           ++ DIWS G ++  +L+G  PF        L AI     +   +    ISS A D + + 
Sbjct: 191 RKADIWSLGCLVVEMLTGKHPF---PDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKT 247

Query: 257 LIRDPNNQITVAQILKHPWL 276
              D N + T A++LKHP+L
Sbjct: 248 FEIDHNKRPTAAELLKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 78.5 bits (193), Expect = 4e-16
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 8/154 (5%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
            L   H    ++RDLKPEN +    D+   ++ +D GLA    EG+     VGT  YMAP
Sbjct: 114 GLEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAP 170

Query: 188 ELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS 247
           E+L   +Y    D W  G ++Y ++ G  PF           +  R ++ +       S 
Sbjct: 171 EVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSE 230

Query: 248 SAKDLIRRMLIRDPNNQI-----TVAQILKHPWL 276
            AK + + +L +DP  ++        ++ +HP+ 
Sbjct: 231 EAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFF 264

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 78.9 bits (194), Expect = 5e-16
 Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 43/191 (22%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           HS GI+HRDLKP N +  +D    TLK  DFGLA       +    V T  Y APE++  
Sbjct: 140 HSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG 196

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWA----ESLYGTLTAIMSREIDFKSDPWPTI--- 245
             Y + +DIWS G I+  L+ G+  F      +     +  + +   +F +   PT+   
Sbjct: 197 MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNY 256

Query: 246 -------------------------------SSSAKDLIRRMLIRDPNNQITVAQILKHP 274
                                          +S A+DL+ +ML+ DP+ +I+V + L+HP
Sbjct: 257 VENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316

Query: 275 WLN--YENGEA 283
           ++   Y+  EA
Sbjct: 317 YITVWYDPAEA 327

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 79.1 bits (195), Expect = 6e-16
 Identities = 74/261 (28%), Positives = 109/261 (41%), Gaps = 64/261 (24%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E   GG L+  +   + ++E          V A+ A H  G +HRD+KP+N +   
Sbjct: 77  YLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI-- 134

Query: 152 DDENATLKATDFGLAFFFE------------EGKVYE----------------------- 176
            D    +K +DFGL+  F             +GK  +                       
Sbjct: 135 -DRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQ 193

Query: 177 -------------EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL 223
                          VGTP Y+APE+     YG+E D WS G I++  L G  PF +E+ 
Sbjct: 194 IATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENS 253

Query: 224 YGTLTAIMS-RE-IDFKSDPWPTISSSAKDLIRRMLIRDPNNQI---TVAQILKHPWLNY 278
           + T   I++ RE + F  D    +S  A+DLIRR LI +  N++      +I  HP+   
Sbjct: 254 HETYRKIINWRETLYFPDD--IHLSVEAEDLIRR-LITNAENRLGRGGAHEIKSHPFF-- 308

Query: 279 ENGEAWD--RPIDTAIISRVK 297
             G  WD  R I    I ++K
Sbjct: 309 -RGVDWDTIRQIRAPFIPQLK 328

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 77.4 bits (190), Expect = 8e-16
 Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 53/268 (19%)

Query: 53  IAEELCRGESGRIYLCTENSTGLQFACKSI-SKTSKSDEGYLKR---------------- 95
           I  EL  G  G++Y      TG   A K I +K+ +  E Y+                  
Sbjct: 16  IIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLL 75

Query: 96  -------------EHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRD 141
                        E C GG +   + + +R  TE     + R ++ AL   HS  I+HRD
Sbjct: 76  GAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRD 135

Query: 142 LKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPEL-----LGPCKY 195
           LK  N + T D +   +K  DFG+ A   +  +  +  +GTP +MAPE+     +    Y
Sbjct: 136 LKAGNVLLTLDGD---IKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPY 192

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK----- 250
             + DIWS G+ L  +     P    +    L  I       KS+P PT+S  +K     
Sbjct: 193 DYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA------KSEP-PTLSQPSKWSMEF 245

Query: 251 -DLIRRMLIRDPNNQITVAQILKHPWLN 277
            D ++  L + P  + + AQ+L+HP+++
Sbjct: 246 RDFLKTALDKHPETRPSAAQLLEHPFVS 273

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 77.7 bits (191), Expect = 1e-15
 Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 8/178 (4%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D  Y   E+ +GG L+  I    ++ E  A      +   L   H  GI++RDLK +N +
Sbjct: 74  DRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVM 133

Query: 149 FTTDDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
               D    +K  DFG+      +G       GTP Y+APE++    YGK +D W+ G++
Sbjct: 134 L---DSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVL 190

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           LY +L+G  PF  E       +IM   + +      ++S  A  + + ++ + P+ ++
Sbjct: 191 LYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHPSKRL 244

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 76.6 bits (188), Expect = 1e-15
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 4/159 (2%)

Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGK 173
           ER     F  + +A+   HS  +MHRD+KP N   T       +K  D GL  FF  +  
Sbjct: 105 ERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGV---VKLGDLGLGRFFSSKTT 161

Query: 174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR 233
               +VGTP YM+PE +    Y  + DIWS G +LY + +   PF+ + +          
Sbjct: 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE 221

Query: 234 EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
           + D+   P    S   ++L+   +  DP+ +  +  + +
Sbjct: 222 QCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 77.9 bits (192), Expect = 1e-15
 Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 39/229 (17%)

Query: 81  SISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHR 140
            +   ++ +  Y+ +E+ +  T +  + ++   +E  A      ++  L   HS  ++HR
Sbjct: 81  DVGSLTELNSVYIVQEYME--TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHR 138

Query: 141 DLKPENFIFTTDDENATLKATDFGLA-----FFFEEGKVYEEVVGTPLYMAPEL-LGPCK 194
           DLKP N    T+D    LK  DFGLA      +  +G + E +V T  Y +P L L P  
Sbjct: 139 DLKPANVFINTED--LVLKIGDFGLARIVDPHYSHKGYLSEGLV-TKWYRSPRLLLSPNN 195

Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWA-----ESLYGTLTAI-MSREID-----------F 237
           Y K ID+W+AG I   +L+G +P +A     E +   L ++ + RE D            
Sbjct: 196 YTKAIDMWAAGCIFAEMLTG-KPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFV 254

Query: 238 KSDPW----------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           ++D            P ++  A D + ++L  +P +++T  + L HP++
Sbjct: 255 RNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYM 303

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 76.0 bits (187), Expect = 2e-15
 Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 14/189 (7%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+  GG++   +    R+ E+        V+  L   HS GI+HRDLK +N +    D +
Sbjct: 88  EYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DAD 144

Query: 156 ATLKATDFGLAFFFEEGKVYEEVV-----GTPLYMAPELLGPCK--YGKEIDIWSAGLIL 208
              K +DFG++   ++  +Y+        G+  +MAPE++      Y  ++DIWS G ++
Sbjct: 145 GICKISDFGISKKSDD--IYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVV 202

Query: 209 YNLLSGAQPFWAESLYGTLTAI--MSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT 266
             + +G +P+  E     +  +           D    +S  A D +      +P+N+ T
Sbjct: 203 LEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPT 262

Query: 267 VAQILKHPW 275
             ++L+HP+
Sbjct: 263 ARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 75.8 bits (186), Expect = 2e-15
 Identities = 52/182 (28%), Positives = 78/182 (42%), Gaps = 12/182 (6%)

Query: 96  EHCDGGTLVDRI----SDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           E  D G L   I      +    E+     F  + +AL   HS  +MHRD+KP N   T 
Sbjct: 82  ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA 141

Query: 152 DDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
                 +K  D GL  FF  +      +VGTP YM+PE +    Y  + DIWS G +LY 
Sbjct: 142 ---TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE 198

Query: 211 LLSGAQPFWAE--SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVA 268
           + +   PF+ +  +LY     I   + D+   P    S   + L+   +  DP  +  + 
Sbjct: 199 MAALQSPFYGDKMNLYSLCKKI--EQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDIT 256

Query: 269 QI 270
            +
Sbjct: 257 YV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 76.6 bits (188), Expect = 3e-15
 Identities = 56/200 (28%), Positives = 81/200 (40%), Gaps = 39/200 (19%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E   GG ++  +  ++  TE          V A+ + H  G +HRD+KP+N +   
Sbjct: 77  YLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL-- 134

Query: 152 DDENATLKATDFGLAFFFEEGKVYE----------------------------------- 176
            D    +K +DFGL    ++    E                                   
Sbjct: 135 -DSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLA 193

Query: 177 -EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI 235
              VGTP Y+APE+     Y K  D WS G+I+Y +L G  PF +E+   T   +M+ + 
Sbjct: 194 FSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKE 253

Query: 236 DFKSDPWPTISSSAKDLIRR 255
                P   IS  AKDLI R
Sbjct: 254 TLIFPPEVPISEKAKDLILR 273

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 75.6 bits (186), Expect = 3e-15
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 18/158 (11%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           H   I++RDLKPEN +    D+   ++ +D GLA    EG+     VGT  YMAPE++  
Sbjct: 119 HRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKN 175

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID--FKSDP---WPTISS 247
            +Y    D W  G ++Y ++ G  PF           +   E++   K D        S 
Sbjct: 176 ERYTFSPDWWGLGCLIYEMIEGKSPFRQRK-----EKVKREEVERRVKEDQEEYSEKFSE 230

Query: 248 SAKDLIRRMLIRDPNNQI-----TVAQILKHPWLNYEN 280
           +A+ + R++L +DP  ++        ++  HP+    N
Sbjct: 231 AARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN 268

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 76.6 bits (188), Expect = 3e-15
 Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 14/191 (7%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E   GG     +   +R+           +V       S  I++RDLKPEN +   
Sbjct: 107 YLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL-- 164

Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D++  +K TDFG A   +  + Y  + GTP Y+APE+L    +GK  D W+ G+ +Y +
Sbjct: 165 -DKDGFIKMTDFGFAKVVDT-RTYT-LCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEI 221

Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
           L G  PF+A         I+   I F       + ++ K L++++L  D      N +  
Sbjct: 222 LVGCPPFYANEPLLIYQKILEGIIYFPK----FLDNNCKHLMKKLLSHDLTKRYGNLKKG 277

Query: 267 VAQILKHPWLN 277
              + +HPW  
Sbjct: 278 AQNVKEHPWFG 288

Length = 340

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 74.9 bits (184), Expect = 5e-15
 Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 21/204 (10%)

Query: 86  SKSDEGYLK--REHCDGGTLVDRISDR---ERYTERAAASVFRSVVNALHACHSNGIMHR 140
           S S+ G+ K   E   GG+L   +  +    +  E+      + ++  L   H N I+HR
Sbjct: 73  SDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHR 132

Query: 141 DLKPENFIFTTDDENATLKATDFG----LAFFFEEGKVYEEVVGTPLYMAPELL--GPCK 194
           D+K +N +  T   +  +K +DFG    LA         E   GT  YMAPE++  GP  
Sbjct: 133 DIKGDNVLVNT--YSGVVKISDFGTSKRLAGI---NPCTETFTGTLQYMAPEVIDKGPRG 187

Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP-WPT-ISSSAKDL 252
           YG   DIWS G  +  + +G  PF      G   A M +   FK  P  P  +S+ AK+ 
Sbjct: 188 YGAPADIWSLGCTIVEMATGKPPFIE---LGEPQAAMFKVGMFKIHPEIPESLSAEAKNF 244

Query: 253 IRRMLIRDPNNQITVAQILKHPWL 276
           I R    DP+ + +   +L+ P+L
Sbjct: 245 ILRCFEPDPDKRASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 74.5 bits (184), Expect = 6e-15
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 28/190 (14%)

Query: 100 GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLK 159
            G L D +    + +E     + R +V AL+  H + I+H D+K EN ++  D     + 
Sbjct: 93  DGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY--DRAKDRIY 150

Query: 160 ATDFGLAFFFEEGKVYEEVVGTPL-------YMAPELLGPCKYGKEIDIWSAGLILYNLL 212
             D+GL           +++GTP        Y +PE +    Y    D W+ G++ Y LL
Sbjct: 151 LCDYGLC----------KIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELL 200

Query: 213 SGAQPF---WAESL-YGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQ-ITV 267
           +G  PF     E L   +L     +++ F  +    +S +A D ++ ML  + N +    
Sbjct: 201 TGKHPFKEDEDEELDLESLLKRQQKKLPFIKN----VSKNANDFVQSMLKYNINYRLTNY 256

Query: 268 AQILKHPWLN 277
            +I+KHP+L 
Sbjct: 257 NEIIKHPFLK 266

Length = 267

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 73.8 bits (181), Expect = 1e-14
 Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 19/165 (11%)

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-------FFFEEGKVY 175
           + +++ +   H+N ++HRD+K  N +      N  +K  DFG A              + 
Sbjct: 109 KQILDGVAYLHNNCVVHRDIKGNNVMLMP---NGIIKLIDFGCARRLAWVGLHGTHSNML 165

Query: 176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI 235
           + + GTP +MAPE++    YG++ DIWS G  ++ + +G +P  A      L A+    I
Sbjct: 166 KSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATG-KPPLAS--MDRLAAMFY--I 220

Query: 236 DFKSDPWPTI----SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                  P +    S++A D +   L RD + + +  Q+L+H +L
Sbjct: 221 GAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 73.6 bits (180), Expect = 1e-14
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 17/198 (8%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYT--ERAAASVFRSVVNALHACHSNGIMHRDLKPEN 146
           D+ +L  E C  G++ D I + +  T  E   A + R ++  L   H + ++HRD+K +N
Sbjct: 82  DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQN 141

Query: 147 FIFTTDDENATLKATDFGLAFFFEE--GKVYEEVVGTPLYMAPELLG-----PCKYGKEI 199
            + T   ENA +K  DFG++   +   G+     +GTP +MAPE++         Y  + 
Sbjct: 142 VLLT---ENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVIACDENPDATYDFKS 197

Query: 200 DIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-FKSDPWPTISSSAKDLIRRMLI 258
           D+WS G+    +  GA P         L  I        KS  W   S   +  I   L+
Sbjct: 198 DLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQSFIESCLV 254

Query: 259 RDPNNQITVAQILKHPWL 276
           ++ + + T  Q++KHP++
Sbjct: 255 KNHSQRPTTEQLMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 73.5 bits (180), Expect = 2e-14
 Identities = 66/276 (23%), Positives = 108/276 (39%), Gaps = 63/276 (22%)

Query: 53  IAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------- 91
           I E + +G  G++Y  T    G   A K +   S  DE                      
Sbjct: 26  IIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFY 85

Query: 92  --------------YLKREHCDGGTLVDRISDR----ERYTERAAASVFRSVVNALHACH 133
                         +L  E C+GG++ + +       +R  E   + +    +  L   H
Sbjct: 86  GMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH 145

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-VGTPLYMAPELLGP 192
           +N I+HRD+K  N + TT+     +K  DFG++      ++     VGTP +MAPE++  
Sbjct: 146 NNRIIHRDVKGNNILLTTE---GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIA- 201

Query: 193 CK------YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS 246
           C+      Y    D+WS G+    L  G  P +      TL  I         +P PT+ 
Sbjct: 202 CEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKI-------PRNPPPTLL 254

Query: 247 SSAK------DLIRRMLIRDPNNQITVAQILKHPWL 276
              K        I + LI+D   + +V  +L+HP++
Sbjct: 255 HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFI 290

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 73.1 bits (179), Expect = 2e-14
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 10/137 (7%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           HS  I++RD+KPEN +    D+    + +D GLA   ++GK   +  GT  YMAPE+L  
Sbjct: 112 HSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKE 168

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPF--WAESLYG--TLTAIMSREIDFKSDPWPTISSS 248
             Y   +D ++ G  +Y +++G  PF    E +         +  E+ F+       +  
Sbjct: 169 EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQ---NFTEE 225

Query: 249 AKDLIRRMLIRDPNNQI 265
           +KD+ R  L + P +++
Sbjct: 226 SKDICRLFLAKKPEDRL 242

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 73.2 bits (179), Expect = 2e-14
 Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 47/262 (17%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACK----------------SISKTSKSDEGYLK 94
           FT  E + +G  G +Y   +N T    A K                 I+  S+ D  Y+ 
Sbjct: 6   FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 65

Query: 95  R---------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
           R               E+  GG+ +D +       E   A++ R ++  L   HS   +H
Sbjct: 66  RYYGSYLKGTKLWIIMEYLGGGSALDLLKPGP-LEETYIATILREILKGLDYLHSERKIH 124

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-VGTPLYMAPELLGPCKYGKE 198
           RD+K  N + +   E   +K  DFG+A    + ++     VGTP +MAPE++    Y  +
Sbjct: 125 RDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFK 181

Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----SSSAKDLIR 254
            DIWS G+    L  G  P         L  +    +  K+ P PT+    S   K+ + 
Sbjct: 182 ADIWSLGITAIELAKGEPP------NSDLHPMRVLFLIPKNSP-PTLEGQYSKPFKEFVE 234

Query: 255 RMLIRDPNNQITVAQILKHPWL 276
             L +DP  + T  ++LKH ++
Sbjct: 235 ACLNKDPRFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 73.9 bits (181), Expect = 2e-14
 Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 44/213 (20%)

Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 181

Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPF--------W---AESL 223
               V T  Y APE++    Y + +DIWS G I+  ++ G   F        W    E L
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241

Query: 224 YGTLTAIMSR--------------------EIDFKSDPWPTIS-------SSAKDLIRRM 256
                  M +                    E  F    +P  S       S A+DL+ +M
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301

Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 72.6 bits (178), Expect = 3e-14
 Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 49/273 (17%)

Query: 57  LCRGESGRIYLCTENSTGLQFACKSISKTS-KSDEGY---------LKREH--------- 97
           L +G  G +  C   +TG  +ACK ++K   K  +GY         L + H         
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAY 60

Query: 98  --------C------DGGTLVDRI----SDRERYTERAAASVFRSVVNALHACHSNGIMH 139
                   C      +GG L   I     +   + E  A      +++ L   H   I++
Sbjct: 61  AFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIY 120

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE-VVGTPLYMAPELLGPCKYGKE 198
           RDLKPEN +    D +  ++ +D GLA   ++G+   +   GTP +MAPELL   +Y   
Sbjct: 121 RDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFS 177

Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
           +D ++ G+ LY +++   PF A         +  R ++         S ++K     +L 
Sbjct: 178 VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLA 237

Query: 259 RDPNNQI-----TVAQILKHPW---LNYENGEA 283
           +DP  ++         +  HP    LN+   EA
Sbjct: 238 KDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEA 270

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 72.7 bits (178), Expect = 3e-14
 Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 25/196 (12%)

Query: 96  EHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           E C GG +   + + ER  TE     V +  + AL+  H N I+HRDLK  N +FT D +
Sbjct: 82  EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGD 141

Query: 155 NATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKE------IDIWSAGLI 207
              +K  DFG+ A      +  +  +GTP +MAPE++  C+  K+       D+WS G+ 
Sbjct: 142 ---IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVV-MCETSKDRPYDYKADVWSLGIT 197

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI------SSSAKDLIRRMLIRDP 261
           L  +     P    +    L  I       KS+P PT+      SS  KD +++ L ++ 
Sbjct: 198 LIEMAQIEPPHHELNPMRVLLKIA------KSEP-PTLAQPSRWSSEFKDFLKKCLEKNV 250

Query: 262 NNQITVAQILKHPWLN 277
           + + T  Q+L+HP++ 
Sbjct: 251 DARWTTTQLLQHPFVT 266

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 72.7 bits (179), Expect = 4e-14
 Identities = 47/183 (25%), Positives = 69/183 (37%), Gaps = 44/183 (24%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV------------YEEVVG 180
           H N I+HRD+K  N +    D    LK  DFGLA  ++                Y  +V 
Sbjct: 132 HENHILHRDIKAANILI---DNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVV 188

Query: 181 TPLYMAPEL-LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTA 229
           T  Y  PEL LG  +Y   +DIW  G +   + +       +S          L GT T 
Sbjct: 189 TRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTE 248

Query: 230 I-MS---------REIDFKSDPWPTISSSAK-------DLIRRMLIRDPNNQITVAQILK 272
                            F + P  T+            DL+ ++L  DP  ++T +  L+
Sbjct: 249 ETWPGWRSLPGCEGVHSFTNYP-RTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307

Query: 273 HPW 275
           HP+
Sbjct: 308 HPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 73.0 bits (179), Expect = 4e-14
 Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 35/174 (20%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPE-LL 190
           HS GI+HRDLKP N     D E   LK  DFGLA   + E   Y   V T  Y APE +L
Sbjct: 134 HSAGIIHRDLKPGNLAVNEDCE---LKILDFGLARHADAEMTGY---VVTRWYRAPEVIL 187

Query: 191 GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS----------REID---- 236
               Y + +DIWS G I+  +L+G   F  +     LT I+           ++++    
Sbjct: 188 NWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAA 247

Query: 237 ---FKSDP----------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               KS P          +P  S  A DL+ +ML  D + ++T  + L+HP+ +
Sbjct: 248 KSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFD 301

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 71.9 bits (177), Expect = 4e-14
 Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 27/194 (13%)

Query: 96  EHCDGGTLVDRIS-DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           E+C GG+L D     R   +E   A V R  +  L   H  G +HRD+K  N + T D +
Sbjct: 80  EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGD 139

Query: 155 NATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYN 210
              +K  DFG+ A         +  +GTP +MAPE+        Y  + DIW+ G+    
Sbjct: 140 ---VKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIE 196

Query: 211 LLSGAQPFW----AESLYGTLTAIMSREIDFKSDPWPTISSSAK------DLIRRMLIRD 260
           L     P +      +L+     ++S+     + P P +    K      D I++ L +D
Sbjct: 197 LAELQPPMFDLHPMRALF-----LISKS----NFPPPKLKDKEKWSPVFHDFIKKCLTKD 247

Query: 261 PNNQITVAQILKHP 274
           P  + T  ++L+HP
Sbjct: 248 PKKRPTATKLLQHP 261

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 73.1 bits (179), Expect = 5e-14
 Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 41/208 (19%)

Query: 101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA 160
           GT + ++   E+ +E     +   ++  L   H+ GI+HRDLKP N     D E   LK 
Sbjct: 103 GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCE---LKI 159

Query: 161 TDFGLAFFFEEGKVYEEVVG---TPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQ 216
            DFGLA      +   E+ G   T  Y APE +L    Y + +DIWS G I+  +L+G  
Sbjct: 160 LDFGLA-----RQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKP 214

Query: 217 PFWAESLYGTLTAIMS----------------------------REIDFKSDPWPTISSS 248
            F        L  IM                             R+ DF+S   P  +  
Sbjct: 215 LFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRS-LLPNANPL 273

Query: 249 AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           A +++ +ML+ D  ++IT A+ L HP+ 
Sbjct: 274 AVNVLEKMLVLDAESRITAAEALAHPYF 301

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 72.8 bits (178), Expect = 5e-14
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 42/201 (20%)

Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 119 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 174

Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234

Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 294

Query: 257 LIRDPNNQITVAQILKHPWLN 277
           L+ DP  +I+V + L+HP++N
Sbjct: 295 LVIDPAKRISVDEALQHPYIN 315

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 72.0 bits (177), Expect = 6e-14
 Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 45/245 (18%)

Query: 70  ENSTGLQFACKSISKTSKSDEG--YLKREHCD---GGTLVDRISDRERYTERAAASVFRS 124
           EN   L   C++ +      +G  YL  E C+    G L ++     ++T      V + 
Sbjct: 71  ENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNK---NVKFTLSEIKKVMKM 127

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-----YEEVV 179
           ++N L+  H N I+HRD+K  N + T   ++  LK  DFGLA  F   K      Y   V
Sbjct: 128 LLNGLYYIHRNKILHRDMKAANILIT---KDGILKLADFGLARAFSLSKNSKPNRYTNRV 184

Query: 180 GTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI-------- 230
            T  Y  PE LLG   YG  ID+W AG I+  + + +      +    LT I        
Sbjct: 185 VTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244

Query: 231 -----------MSREIDF--------KSDPWPTISS-SAKDLIRRMLIRDPNNQITVAQI 270
                      + ++++         K    P +    A DLI ++L+ DP  +I     
Sbjct: 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTA 304

Query: 271 LKHPW 275
           L H +
Sbjct: 305 LNHDF 309

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 71.6 bits (175), Expect = 7e-14
 Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 47/262 (17%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------- 90
           FT  E++ +G  G ++   +N T    A K I      DE                    
Sbjct: 6   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 91  ----GYLK-------REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
                YLK        E+  GG+ +D + +     E   A++ R ++  L   HS   +H
Sbjct: 66  KYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIH 124

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-VGTPLYMAPELLGPCKYGKE 198
           RD+K  N + +   E+  +K  DFG+A    + ++     VGTP +MAPE++    Y  +
Sbjct: 125 RDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 181

Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----SSSAKDLIR 254
            DIWS G+    L  G  P      +  L  +    +  K++P PT+    S   K+ + 
Sbjct: 182 ADIWSLGITAIELAKGEPP------HSELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVE 234

Query: 255 RMLIRDPNNQITVAQILKHPWL 276
             L ++P+ + T  ++LKH ++
Sbjct: 235 ACLNKEPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 71.6 bits (175), Expect = 7e-14
 Identities = 65/262 (24%), Positives = 105/262 (40%), Gaps = 47/262 (17%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------- 90
           FT  E + +G  G ++   +N T    A K I      DE                    
Sbjct: 6   FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 91  ----GYLK-------REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
                YLK        E+  GG+ +D +     + E   A++ + ++  L   HS   +H
Sbjct: 66  KYYGSYLKGTKLWIIMEYLGGGSALDLLRAGP-FDEFQIATMLKEILKGLDYLHSEKKIH 124

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-VGTPLYMAPELLGPCKYGKE 198
           RD+K  N + +   E   +K  DFG+A    + ++     VGTP +MAPE++    Y  +
Sbjct: 125 RDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 181

Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----SSSAKDLIR 254
            DIWS G+    L  G  P        +    M        +  PT+    S   K+ I 
Sbjct: 182 ADIWSLGITAIELAKGEPP-------NSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFID 234

Query: 255 RMLIRDPNNQITVAQILKHPWL 276
             L +DP+ + T  ++LKH ++
Sbjct: 235 ACLNKDPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 71.6 bits (175), Expect = 8e-14
 Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 32/207 (15%)

Query: 89  DEGYLKREHCDGGTLVDRISDR----ERYTERAAASVFRSVVNALHACHSNGIMHRDLKP 144
           D+ +L  E C+GG++ D +       ER  E   A +    +  L   H N  +HRD+K 
Sbjct: 93  DQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKG 152

Query: 145 ENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-VGTPLYMAPELLGPCK------YGK 197
            N + TT+     +K  DFG++      ++     VGTP +MAPE++  C+      Y  
Sbjct: 153 NNILLTTE---GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIA-CEQQLDSTYDA 208

Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK--SDPWPTI------SSSA 249
             D+WS G+    L  G  P         L  +      FK   +P PT+      S+  
Sbjct: 209 RCDVWSLGITAIELGDGDPP---------LADLHPMRALFKIPRNPPPTLHQPELWSNEF 259

Query: 250 KDLIRRMLIRDPNNQITVAQILKHPWL 276
            D IR+ L +D   + TV+ +L+H ++
Sbjct: 260 NDFIRKCLTKDYEKRPTVSDLLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 72.1 bits (177), Expect = 9e-14
 Identities = 55/183 (30%), Positives = 78/183 (42%), Gaps = 36/183 (19%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA---FFFEEGKVY-EEVVGTPL 183
           AL   H+  + HRDLKP+N +    + +  LK  DFGLA   F      ++  + V T  
Sbjct: 115 ALKYIHTANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 171

Query: 184 YMAPELLGP--CKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTA-I 230
           Y APEL G    KY   IDIWS G I   +L+G   F  ++          L GT +   
Sbjct: 172 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPET 231

Query: 231 MSREIDFK----------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHP 274
           +SR  + K                S  +P     A  L+ R+L  DP ++ T  + L  P
Sbjct: 232 ISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291

Query: 275 WLN 277
           +  
Sbjct: 292 YFK 294

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 71.2 bits (174), Expect = 1e-13
 Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 17/204 (8%)

Query: 83  SKTSKSDEGYLKREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHR 140
           S     D+ +L  E C  G++ D + + +     E   A + R ++  L   H++ ++HR
Sbjct: 86  SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHR 145

Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEE--GKVYEEVVGTPLYMAPELLG-----PC 193
           D+K +N + T   ENA +K  DFG++   +   G+     +GTP +MAPE++        
Sbjct: 146 DIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVIACDENPDA 201

Query: 194 KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI-MSREIDFKSDPWPTISSSAKDL 252
            Y    DIWS G+    +  GA P         L  I  +     KS  W   S    D 
Sbjct: 202 TYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKW---SKKFIDF 258

Query: 253 IRRMLIRDPNNQITVAQILKHPWL 276
           I   L+++  ++ +  Q+LKHP++
Sbjct: 259 IEGCLVKNYLSRPSTEQLLKHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 70.8 bits (173), Expect = 1e-13
 Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 11/179 (6%)

Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           + E  A      +   L   H   I++RDLKPEN +    D++  ++ +D GLA    EG
Sbjct: 99  FEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEG 155

Query: 173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS 232
           +  +  VGT  YMAPE++   +Y    D W+ G +LY +++G  PF           +  
Sbjct: 156 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER 215

Query: 233 REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI-----TVAQILKHPW---LNYENGEA 283
              + + +     S  A+ L + +L +DP  ++        ++ +HP    +N++  EA
Sbjct: 216 LVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEA 274

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional

 Score = 67.9 bits (166), Expect = 1e-13
 Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 23/156 (14%)

Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           NGT      L L   + KDT  ++     F +F +  N         +I+A EL      
Sbjct: 61  NGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGN--------GFISAAELRHVMT- 111

Query: 423 YNMG---DDATIKEIMFEVDRDKDGRISYEEFCATM 455
            N+G    D  + E++ E D D DG+I+YEEF   M
Sbjct: 112 -NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146

Length = 149

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 70.8 bits (173), Expect = 2e-13
 Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 35/182 (19%)

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPL 183
           ++  L+ CH   ++HRDLKP+N +    +E   LK  DFGLA       K Y   V T  
Sbjct: 113 LLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYSNEVVTLW 169

Query: 184 YMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES-----------LYGTLT--- 228
           Y  P+ LLG   Y  +ID+W  G I Y + +G +P +  S           + GT T   
Sbjct: 170 YRPPDILLGSTDYSTQIDMWGVGCIFYEMSTG-RPLFPGSTVEEQLHFIFRILGTPTEET 228

Query: 229 --AIMSREIDFKSDPWPT------------ISSSAKDLIRRMLIRDPNNQITVAQILKHP 274
              I+S E +FKS  +P             + S   +L+ ++L  +   +I+  + +KHP
Sbjct: 229 WPGILSNE-EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHP 287

Query: 275 WL 276
           + 
Sbjct: 288 YF 289

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 70.4 bits (172), Expect = 2e-13
 Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 14/163 (8%)

Query: 123 RSVVNALHAC------HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE 176
           R++  A   C          I++RDLKPEN +    D+   ++ +D GLA    EG+   
Sbjct: 103 RAIFYAAELCCGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGETVR 159

Query: 177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID 236
             VGT  YMAPE++   KY    D W  G ++Y ++ G  PF           +  R  +
Sbjct: 160 GRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE 219

Query: 237 FKSDPWPTISSSAKDLIRRMLIRDPNNQI-----TVAQILKHP 274
            + +     S  AK + R +L ++P  ++       A + +HP
Sbjct: 220 DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHP 262

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 70.8 bits (173), Expect = 2e-13
 Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 39/207 (18%)

Query: 101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA 160
           G  ++ I   ++ ++     +   ++  L   HS GI+HRDLKP N     D E   L+ 
Sbjct: 103 GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE---LRI 159

Query: 161 TDFGLAFFFEEGKVYEEVVG---TPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQ 216
            DFGLA      +  +E+ G   T  Y APE +L    Y + +DIWS G I+  LL G  
Sbjct: 160 LDFGLA-----RQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKA 214

Query: 217 PFWAESLYGTLTAIMSREIDFKSDPWPTISSS---------------------------A 249
            F        L  IM        +    ISS                            A
Sbjct: 215 LFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLA 274

Query: 250 KDLIRRMLIRDPNNQITVAQILKHPWL 276
            DL+ +ML+ D + +I+ ++ L HP+ 
Sbjct: 275 IDLLEKMLVLDSDKRISASEALAHPYF 301

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 70.8 bits (173), Expect = 3e-13
 Identities = 60/239 (25%), Positives = 96/239 (40%), Gaps = 55/239 (23%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D  Y   ++  GG ++  +     + E  A      +  A+ + H  G +HRD+KP+N +
Sbjct: 74  DNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 133

Query: 149 FTTDDENATLKATDFGLAFFFE---EGKVYEE---------------------------- 177
               D +  +K TDFGL   F    + K Y+                             
Sbjct: 134 I---DRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLK 190

Query: 178 -----------------VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA 220
                            +VGTP Y+APE+L    Y +  D WS G+ILY +L G  PF A
Sbjct: 191 PLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLA 250

Query: 221 ESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI---TVAQILKHPWL 276
           ++   T   +++ +      P   +S  A DLI + L R P +++      +I  HP+ 
Sbjct: 251 QTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIK-LCRGPEDRLGKNGADEIKAHPFF 308

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 70.5 bits (172), Expect = 3e-13
 Identities = 65/226 (28%), Positives = 96/226 (42%), Gaps = 36/226 (15%)

Query: 101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA 160
           G  ++ I   ++ T+     +   ++  L   HS  I+HRDLKP N     D E   LK 
Sbjct: 105 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKI 161

Query: 161 TDFGLAFFFEEGKVYEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFW 219
            DFGLA   ++       V T  Y APE +L    Y + +DIWS G I+  LL+G   F 
Sbjct: 162 LDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 219

Query: 220 AES----------LYGTLTAIMSREIDFKS-----------------DPWPTISSSAKDL 252
                        L GT  A + ++I  +S                 + +   +  A DL
Sbjct: 220 GTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDL 279

Query: 253 IRRMLIRDPNNQITVAQILKHPWL-NYE--NGEAWDRPIDTAIISR 295
           + +ML+ D + +IT AQ L H +   Y   + E    P D +  SR
Sbjct: 280 LEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESR 325

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 69.5 bits (170), Expect = 3e-13
 Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 8/181 (4%)

Query: 100 GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLK 159
           GG++   +S    + E    +    ++  L   H N I+HRD+K  N +   D     L+
Sbjct: 87  GGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLL--IDSTGQRLR 144

Query: 160 ATDFGLAFFFEE-----GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             DFG A          G+   +++GT  +MAPE+L   +YG+  D+WS G ++  + + 
Sbjct: 145 IADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATA 204

Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPNNQITVAQILKH 273
             P+ AE     L  I        +   P  +S   +D+  R L   P ++    ++LKH
Sbjct: 205 KPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264

Query: 274 P 274
           P
Sbjct: 265 P 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 69.3 bits (169), Expect = 4e-13
 Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 31/180 (17%)

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPL 183
           ++  L  CH   I+HRDLKP+N +    +E   LK  DFGLA       K Y   V T  
Sbjct: 112 LLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPTKTYSNEVVTLW 168

Query: 184 YMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
           Y  P+ LLG  +Y   ID+W  G ILY + +G   F   ++   L  I         + W
Sbjct: 169 YRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETW 228

Query: 243 PTISSSAK--------------------------DLIRRMLIRDPNNQITVAQILKHPWL 276
           P I+S+ +                          DL+  +L+ +  ++I+    L+H + 
Sbjct: 229 PGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 69.7 bits (170), Expect = 5e-13
 Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           +L  E+ +GG L+  +  + +  E  A      +  AL+  H  GI++RDLK +N +   
Sbjct: 72  FLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL-- 129

Query: 152 DDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
            D +  +K TD+G+       G       GTP Y+APE+L   +YG  +D W+ G++++ 
Sbjct: 130 -DADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFE 188

Query: 211 LLSGAQPF 218
           +++G  PF
Sbjct: 189 MMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 69.3 bits (169), Expect = 6e-13
 Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 5/125 (4%)

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPL 183
           ++  L  CH   ++HRDLKP+N +    +E   LK  DFGLA       K Y   V T  
Sbjct: 113 ILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPTKTYSNEVVTLW 169

Query: 184 YMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
           Y  P+ LLG  +Y  +ID+W  G I + + SG   F   ++   L  I         + W
Sbjct: 170 YRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETW 229

Query: 243 PTISS 247
           P ISS
Sbjct: 230 PGISS 234

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 68.9 bits (168), Expect = 7e-13
 Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 29/200 (14%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L+  +  + +  E  A      +  AL+  H  GI++RDLK +N +    D  
Sbjct: 76  EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSE 132

Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TD+G+       G       GTP Y+APE+L    YG  +D W+ G++++ +++G
Sbjct: 133 GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 192

Query: 215 AQPFWAESLYGT------------LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN 262
             PF    + G+               I+ ++I        ++S  A  +++  L +DP 
Sbjct: 193 RSPF---DIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPK 245

Query: 263 N------QITVAQILKHPWL 276
                  Q   A I  HP+ 
Sbjct: 246 ERLGCHPQTGFADIQGHPFF 265

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 68.7 bits (168), Expect = 9e-13
 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 4/124 (3%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E   GG L+  +  + +  E  A      +  AL+  H  GI++RDLK +N +    D  
Sbjct: 76  EFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL---DAE 132

Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TD+G+       G       GTP Y+APE+L    YG  +D W+ G++++ +++G
Sbjct: 133 GHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 192

Query: 215 AQPF 218
             PF
Sbjct: 193 RSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 68.2 bits (167), Expect = 1e-12
 Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 59/235 (25%)

Query: 96  EHCDGGTL------VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF 149
           EH DGG+L        RI   E    + + +V R +   L   H   IMHRD+KP N + 
Sbjct: 79  EHMDGGSLDQVLKKAGRIP--ENILGKISIAVLRGLT-YLREKHK--IMHRDVKPSNILV 133

Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAG 205
            +  E   +K  DFG++     G++ + +    VGT  YM+PE L    Y  + DIWS G
Sbjct: 134 NSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLG 185

Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSREID------------------------FK--- 238
           L L  +  G  P         L A+  R +                         F+   
Sbjct: 186 LSLVEMAIGRYPIPPPD-AKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLD 244

Query: 239 ---SDPWPTI-----SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWD 285
              ++P P +     S   +D + + L ++P  +  + ++ KHP++     E  D
Sbjct: 245 YIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELEEVD 299

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 67.9 bits (166), Expect = 1e-12
 Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 38/206 (18%)

Query: 119 ASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV 178
           A++    +  L   HS+  +HRD+K  N + T   E  T+K  DFG A        +   
Sbjct: 118 AAICHGALQGLAYLHSHERIHRDIKAGNILLT---EPGTVKLADFGSASLVSPANSF--- 171

Query: 179 VGTPLYMAPEL---LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI 235
           VGTP +MAPE+   +   +Y  ++D+WS G+    L     P +  +    L  I     
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA---- 227

Query: 236 DFKSDPWPTISSSA-----KDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDT 290
             ++D  PT+SS+      ++ +   L + P ++ +  ++LKH ++        +RP   
Sbjct: 228 --QNDS-PTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR------ERPPTV 278

Query: 291 AI--ISRVK---------QFRAMSKL 305
            I  I R K         Q+R M K+
Sbjct: 279 IIDLIQRTKDAVRELDNLQYRKMKKI 304

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 69.9 bits (171), Expect = 1e-12
 Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 10/184 (5%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+  G TL + ++            +   V++AL   H+ GI+HRDLKP+N + +     
Sbjct: 59  EYVPGRTLREVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVR 118

Query: 156 ATLKATDFGLAFF---FEEGKVYE-----EVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
              K  DFG+        +  V       EV+GTP Y APE L         D+++ GLI
Sbjct: 119 PHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLI 178

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
               L+G +     S+   L   +S  +D    PW         ++R+ L +DP  +   
Sbjct: 179 FLECLTGQRVVQGASVAEILYQQLS-PVDVSLPPW-IAGHPLGQVLRKALNKDPRQRAAS 236

Query: 268 AQIL 271
           A  L
Sbjct: 237 APAL 240

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 68.4 bits (167), Expect = 2e-12
 Identities = 70/305 (22%), Positives = 117/305 (38%), Gaps = 58/305 (19%)

Query: 30  DDDDDDDDTILG---KAYEDI-KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT 85
           + DDDDDD ++    KA E +  L +T+ + L  G  GR+++ T+         K   K 
Sbjct: 43  ESDDDDDDGLIPTKQKAREVVASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG 102

Query: 86  SKSDEGYLKRE--------------------------HCDGGTLVDRISDRERYTERAAA 119
           +   E  L +                             D  T + + S         A 
Sbjct: 103 TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRS--RPLPIDQAL 160

Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV 179
            + + ++  L   H+  I+HRD+K EN IF  D +   +   D G A F      +  + 
Sbjct: 161 IIEKQILEGLRYLHAQRIIHRDVKTEN-IFINDVDQVCI--GDLGAAQFPVVAPAFLGLA 217

Query: 180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS 239
           GT    APE+L   KY  + DIWSAG++L+ +L  A P          + I         
Sbjct: 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEML--AYP----------STIFEDPPSTPE 265

Query: 240 DPWPTISSSAKDLIRRMLI------RDPNNQITV-----AQILKHPWLNYENGEAWDRPI 288
           +   +  S    +I  + +      RDP +++       A + + P+  Y   +  + PI
Sbjct: 266 EYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPI 325

Query: 289 DTAII 293
           D   +
Sbjct: 326 DGEFL 330

Length = 357

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 67.3 bits (164), Expect = 2e-12
 Identities = 74/287 (25%), Positives = 103/287 (35%), Gaps = 71/287 (24%)

Query: 55  EELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG----------YLKR-EHCDGGTL 103
           E+L  G    +Y       G   A K IS   K++EG           LK  +H +   L
Sbjct: 11  EKLGEGSYATVYKGISRINGQLVALKVISM--KTEEGVPFTAIREASLLKGLKHANIVLL 68

Query: 104 VDRISDRE------RYTERAAASVFRSVVNALHAC----------------HSNGIMHRD 141
            D I  +E       Y     A         LH                  H   I+HRD
Sbjct: 69  HDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRD 128

Query: 142 LKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPE-LLGPCKYGKEI 199
           LKP+N + +   E   LK  DFGLA       + Y   V T  Y  P+ LLG   Y   +
Sbjct: 129 LKPQNLLISYLGE---LKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSAL 185

Query: 200 DIWSAGLILYNLLSGAQPFWA------ESLYGTLTAI----------MSREIDFKSD--P 241
           DIW AG I   +L G QP +       E L    T +          +S+  ++K +   
Sbjct: 186 DIWGAGCIFIEMLQG-QPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFL 244

Query: 242 WPTISS------------SAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                              A+DL  +ML+  P ++I+    L HP+ 
Sbjct: 245 PCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 67.4 bits (165), Expect = 2e-12
 Identities = 48/176 (27%), Positives = 73/176 (41%), Gaps = 34/176 (19%)

Query: 132 CHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPE-L 189
           CH   ++HRDLKP+N + +   E   LK  DFGLA       K Y   V T  Y  P+ L
Sbjct: 119 CHQRRVLHRDLKPQNLLIS---ERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVL 175

Query: 190 LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES-----------LYGTLT-----AIMSR 233
           LG  +Y   +D+W  G I Y + +G   F   +           + GT T      + S 
Sbjct: 176 LGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN 235

Query: 234 EI-------DFKSDP----WPTIS--SSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                     +   P     P +      ++L  + L  +P  +I+ A+ +KHP+ 
Sbjct: 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 66.9 bits (163), Expect = 2e-12
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 8/169 (4%)

Query: 99  DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL 158
           +GG L   +S    ++E         ++  L   H+  +++RDLKP N +    DE+  +
Sbjct: 80  NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHV 136

Query: 159 KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQP 217
           + +D GLA  F + K +   VGT  YMAPE+L     Y    D +S G +L+ LL G  P
Sbjct: 137 RISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 195

Query: 218 FWAESLYGTLTAIMSREIDFKSDPWP-TISSSAKDLIRRMLIRDPNNQI 265
           F            + R     +   P + S   + L+  +L RD N ++
Sbjct: 196 FRQHKTKDKHE--IDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 242

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 66.6 bits (162), Expect = 2e-12
 Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 18/199 (9%)

Query: 87  KSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPEN 146
           + D+ ++  E C GG+L D        +E   A V R  +  L+  HS G MHRD+K  N
Sbjct: 77  RRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGAN 136

Query: 147 FIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK---YGKEIDIW 202
            + T   +N  +K  DFG+ A         +  +GTP +MAPE+    +   Y +  DIW
Sbjct: 137 ILLT---DNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIW 193

Query: 203 SAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI------SSSAKDLIRRM 256
           + G+    L     P +   L+      +  + +F+    P +      S+S    ++  
Sbjct: 194 AVGITAIELAELQPPMF--DLHPMRALFLMTKSNFQP---PKLKDKMKWSNSFHHFVKMA 248

Query: 257 LIRDPNNQITVAQILKHPW 275
           L ++P  + T  ++L+HP+
Sbjct: 249 LTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 67.3 bits (164), Expect = 3e-12
 Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 51/216 (23%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D  Y   ++  GG ++  +   E + E  A      +  A+ + H  G +HRD+KP+N +
Sbjct: 74  DNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNIL 133

Query: 149 FTTDDENATLKATDFGLAFFFE---EGKVYEE---------------------------- 177
               D +  +K TDFGL   F      K Y++                            
Sbjct: 134 I---DLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLK 190

Query: 178 -----------------VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA 220
                            +VGTP Y+APE+L    Y +  D WS G+IL+ +L G  PF A
Sbjct: 191 TLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLA 250

Query: 221 ESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM 256
            +   T   +++ E      P   +S  A DLI ++
Sbjct: 251 PTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKL 286

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 66.4 bits (162), Expect = 4e-12
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 25/153 (16%)

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGP 192
           IMHRD+KP N +  +  +   +K  DFG++     G++   +    VGT  YM+PE +  
Sbjct: 125 IMHRDIKPSNILVNSRGQ---IKLCDFGVS-----GELINSIADTFVGTSTYMSPERIQG 176

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPF-WAESLYGTLTAIMS-----REIDFKSDPWPTIS 246
            KY  + D+WS G+ +  L  G  PF ++          M      ++I    +P P + 
Sbjct: 177 GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQI--VQEPPPRLP 234

Query: 247 SS-----AKDLIRRMLIRDPNNQITVAQILKHP 274
           SS      +D +   L++DP  + T  Q+   P
Sbjct: 235 SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 68.2 bits (166), Expect = 5e-12
 Identities = 57/196 (29%), Positives = 85/196 (43%), Gaps = 35/196 (17%)

Query: 92  YLKREHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHS-----NG--IMHR 140
           Y+  E CD G L   I        +  E A   + R +++AL  CH+     NG  ++HR
Sbjct: 90  YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHR 149

Query: 141 DLKPENFIFTTD--------------DENATLKATDFGLAFFFEEGKVYEEVVGTPLYMA 186
           DLKP+N   +T               +     K  DFGL+       +    VGTP Y +
Sbjct: 150 DLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWS 209

Query: 187 PELL--GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT 244
           PELL      Y  + D+W+ G I+Y L SG  PF   + +  L +      + K  P   
Sbjct: 210 PELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLIS------ELKRGPDLP 263

Query: 245 ISSSAKDLIRRMLIRD 260
           I   +K+L   +LI++
Sbjct: 264 IKGKSKEL--NILIKN 277

Length = 1021

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 66.2 bits (161), Expect = 7e-12
 Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 13/127 (10%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDDE 154
           EH DGG+L   + + +R  E     V  +V+  L +    + IMHRD+KP N +  +  E
Sbjct: 83  EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE 142

Query: 155 NATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
              +K  DFG++     G++ + +    VGT  YM+PE L    Y  + DIWS GL L  
Sbjct: 143 ---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 194

Query: 211 LLSGAQP 217
           L  G  P
Sbjct: 195 LAIGRYP 201

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 64.3 bits (156), Expect = 2e-11
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 6/134 (4%)

Query: 77  FACKSISKTSKSDEGYLKREHCDGG--TLVDRISDRERYTERAAASVFRSVVNALHACHS 134
           F   ++S+T +  +  L  EH D    T +D++ +    TE     +F+ ++  L   HS
Sbjct: 70  FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LLRGLDFLHS 128

Query: 135 NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
           + ++HRDLKP+N + T+  +   +K  DFGLA  +        VV T  Y APE+L    
Sbjct: 129 HRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 185

Query: 195 YGKEIDIWSAGLIL 208
           Y   +D+WS G I 
Sbjct: 186 YATPVDLWSVGCIF 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 65.6 bits (160), Expect = 3e-11
 Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 29/185 (15%)

Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE--------- 170
           S+F  +   +   HS G++HRDLKP+N +     E   L   D+G A F +         
Sbjct: 117 SIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVIL---DWGAAIFKKLEEEDLLDI 173

Query: 171 ----EGKVYEE------VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA 220
                   Y        +VGTP YMAPE L      +  DI++ G+ILY +L+ + P+  
Sbjct: 174 DVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233

Query: 221 ESLYGTLTAIMSRE-IDFKSD--PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
           +        I  R+ I    +  P+  I      +  + L  DP  + +  Q LK     
Sbjct: 234 KK----GRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEP 289

Query: 278 YENGE 282
           +  G 
Sbjct: 290 HLQGS 294

Length = 932

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 64.6 bits (157), Expect = 3e-11
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 7/111 (6%)

Query: 107 ISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA 166
           ++ +         ++ RSV+ A+   H N I+HRD+K EN IF     +  L   DFG A
Sbjct: 173 LAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAEN-IFINHPGDVCLG--DFGAA 229

Query: 167 FF---FEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
            F       K Y    GT    APELL    YG  +DIWSAG++L+ + + 
Sbjct: 230 CFPVDINANKYYGWA-GTIATNAPELLARDPYGPAVDIWSAGIVLFEMATC 279

Length = 391

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 63.1 bits (153), Expect = 4e-11
 Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+C GG+L D        +E   A V R  +  L   HS G MHRD+K  N + T   +N
Sbjct: 86  EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT---DN 142

Query: 156 ATLKATDFGLAFFFEEGKVYEEV------VGTPLYMAPELLGPCK---YGKEIDIWSAGL 206
             +K  DFG+A      K+   +      +GTP +MAPE+    K   Y +  DIW+ G+
Sbjct: 143 GDVKLADFGVA-----AKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGI 197

Query: 207 ILYNLLSGAQPFWAESLYGTLTAIMSREIDFK------SDPWPTISSSAKDLIRRMLIRD 260
               L     P +   L+      +  + +F+         W   SS+  + ++  L ++
Sbjct: 198 TAIELAELQPPMF--DLHPMRALFLMSKSNFQPPKLKDKTKW---SSTFHNFVKISLTKN 252

Query: 261 PNNQITVAQILKH 273
           P  + T  ++L H
Sbjct: 253 PKKRPTAERLLTH 265

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 64.1 bits (156), Expect = 6e-11
 Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 10/121 (8%)

Query: 93  LKREHCDGGTLVDRISDRERYTERA-AASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           L +   D   L   +  R R    A   +V R +++A+   H  GI+HRD+K EN +   
Sbjct: 239 LPKYRSD---LYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTEN-VLVN 294

Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
             E+  L   DFG A F         +  + GT    APE+L    Y   +DIWSAGL++
Sbjct: 295 GPEDICLG--DFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVI 352

Query: 209 Y 209
           +
Sbjct: 353 F 353

Length = 461

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 62.8 bits (152), Expect = 7e-11
 Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 30/234 (12%)

Query: 87  KSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPEN 146
           +    +L  E+C G         ++   E   A+V    +  L   HS+ ++HRD+K  N
Sbjct: 86  REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN 145

Query: 147 FIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPEL---LGPCKYGKEIDIWS 203
            + +   E   +K  DFG A        +   VGTP +MAPE+   +   +Y  ++D+WS
Sbjct: 146 ILLS---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWS 199

Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREID-FKSDPWPTISSSAKDLIRRMLIRDPN 262
            G+    L     P +  +    L  I   E    +S  W   S   ++ +   L + P 
Sbjct: 200 LGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQ 256

Query: 263 NQITVAQILKHPWLNYENGEAWDRPIDT--AIISRVK---------QFRAMSKL 305
           ++ T   +LKH ++  E      RP      +I R K         Q+R M K+
Sbjct: 257 DRPTSEVLLKHRFVLRE------RPPTVIMDLIQRTKDAVRELDNLQYRKMKKI 304

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 62.8 bits (152), Expect = 8e-11
 Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 26/228 (11%)

Query: 91  GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
            +L  E+C G         ++   E   A++    +  L   HS+ ++HRD+K  N + T
Sbjct: 100 AWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT 159

Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPEL---LGPCKYGKEIDIWSAGLI 207
              E   +K  DFG A        +   VGTP +MAPE+   +   +Y  ++D+WS G+ 
Sbjct: 160 ---EPGQVKLADFGSASIASPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 213

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREI-DFKSDPWPTISSSAKDLIRRMLIRDPNNQIT 266
              L     P +  +    L  I   E    +S+ W   S   ++ +   L + P ++ T
Sbjct: 214 CIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEW---SDYFRNFVDSCLQKIPQDRPT 270

Query: 267 VAQILKHPWLNYENGEAWDRPIDTAIISRVK---------QFRAMSKL 305
             ++LKH ++  E  E     +   +I R K         Q+R M KL
Sbjct: 271 SEELLKHMFVLRERPET----VLIDLIQRTKDAVRELDNLQYRKMKKL 314

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 62.7 bits (152), Expect = 8e-11
 Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 30/234 (12%)

Query: 87  KSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPEN 146
           K    +L  E+C G         ++   E   A++    +  L   HS+ ++HRD+K  N
Sbjct: 92  KEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGN 151

Query: 147 FIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPEL---LGPCKYGKEIDIWS 203
            + T   E   +K  DFG A        +   VGTP +MAPE+   +   +Y  ++D+WS
Sbjct: 152 ILLT---EPGQVKLADFGSASKSSPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWS 205

Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREI-DFKSDPWPTISSSAKDLIRRMLIRDPN 262
            G+    L     P +  +    L  I   +    +S+ W   + S +  +   L + P 
Sbjct: 206 LGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEW---TDSFRGFVDYCLQKIPQ 262

Query: 263 NQITVAQILKHPWLNYENGEAWDRPIDTAI--ISRVK---------QFRAMSKL 305
            +   A++L+H ++        DRP    I  I R K         Q+R M K+
Sbjct: 263 ERPASAELLRHDFVRR------DRPARVLIDLIQRTKDAVRELDNLQYRKMKKI 310

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 62.4 bits (151), Expect = 1e-10
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 13/127 (10%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDDE 154
           EH DGG+L   +    R  E+    V  +V+  L +    + IMHRD+KP N +  +  E
Sbjct: 83  EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 142

Query: 155 NATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
              +K  DFG++     G++ + +    VGT  YM+PE L    Y  + DIWS GL L  
Sbjct: 143 ---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 194

Query: 211 LLSGAQP 217
           +  G  P
Sbjct: 195 MAIGRYP 201

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 61.3 bits (149), Expect = 2e-10
 Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 23/176 (13%)

Query: 124 SVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           S+V AL   HS   ++HRD+KP N +    + N  +K  DFG++ +  +        G  
Sbjct: 111 SIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYLVDSVAKTIDAGCK 167

Query: 183 LYMAPELLGP----CKYGKEIDIWSAGLILYNLLSGAQPF--WAESLYGTLTAIMSREID 236
            YMAPE + P      Y  + D+WS G+ +  L +G  P+  W ++ +  L  ++     
Sbjct: 168 PYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSW-KTPFQQLKQVVE---- 222

Query: 237 FKSDPWPTI-----SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRP 287
              +P P +     S   +D + + L ++   +    ++L+HP+      +  D  
Sbjct: 223 ---EPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLSKNTDVA 275

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 60.8 bits (147), Expect = 2e-10
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 5/121 (4%)

Query: 99  DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL 158
           +GG L   +S    ++E+        ++  L   H+  +++RDLKP N +    DE+  +
Sbjct: 80  NGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHV 136

Query: 159 KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQP 217
           + +D GLA  F + K +   VGT  YMAPE+L     Y    D +S G +L+ LL G  P
Sbjct: 137 RISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSP 195

Query: 218 F 218
           F
Sbjct: 196 F 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 60.3 bits (146), Expect = 4e-10
 Identities = 56/197 (28%), Positives = 83/197 (42%), Gaps = 20/197 (10%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E  DGG+L       E    R A +V    V  L    S  I+HRD+KP N +  T    
Sbjct: 79  EFMDGGSLDVYRKIPEHVLGRIAVAV----VKGLTYLWSLKILHRDVKPSNMLVNT---R 131

Query: 156 ATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
             +K  DFG++        K Y   VGT  YMAPE +   +YG   D+WS G+    L  
Sbjct: 132 GQVKLCDFGVSTQLVNSIAKTY---VGTNAYMAPERISGEQYGIHSDVWSLGISFMELAL 188

Query: 214 GAQPF-WAESLYGTLTAIMSREIDFKSDPWPTI-----SSSAKDLIRRMLIRDPNNQITV 267
           G  P+   +   G+L  +   +     DP P +     S      I + + + P  +   
Sbjct: 189 GRFPYPQIQKNQGSLMPLQLLQCIVDEDP-PVLPVGQFSEKFVHFITQCMRKQPKERPAP 247

Query: 268 AQILKHPWL-NYENGEA 283
             ++ HP++  Y +G A
Sbjct: 248 ENLMDHPFIVQYNDGNA 264

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 60.1 bits (145), Expect = 7e-10
 Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD-ENATLKATDFGLAFFFEEG----KV 174
           S+   +++ +H  H+N ++HRDLKP N +   +  E   +K  D G A  F         
Sbjct: 112 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 171

Query: 175 YEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPF 218
            + VV T  Y APE LLG   Y K IDIW+ G I   LL+    F
Sbjct: 172 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 60.1 bits (145), Expect = 7e-10
 Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD-ENATLKATDFGLAFFFEEG----KV 174
           S+   +++ +H  H+N ++HRDLKP N +   +  E   +K  D G A  F         
Sbjct: 112 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 171

Query: 175 YEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPF 218
            + VV T  Y APE LLG   Y K IDIW+ G I   LL+    F
Sbjct: 172 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 59.9 bits (145), Expect = 1e-09
 Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 34/203 (16%)

Query: 47  IKLHFTIAEELCRGESGRIYLCTENSTGLQFAC--KSIS--KTSKSDEGYLKR-EHCDGG 101
           +++ + I   L  G  G +++CT++    +     K+++  KT   +   LK   H    
Sbjct: 90  VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAII 149

Query: 102 TLVDRIS--------------DRERYTERA-------AASVFRSVVNALHACHSNGIMHR 140
            L+                  D   Y +R+       A ++ R ++ AL   H  GI+HR
Sbjct: 150 NLIHAYRWKSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHR 209

Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEEG----KVYEEVVGTPLYMAPELLGPCKYG 196
           D+K EN IF  + ENA L   DFG A   +      + Y    GT    +PELL    Y 
Sbjct: 210 DVKTEN-IFLDEPENAVLG--DFGAACKLDAHPDTPQCYGWS-GTLETNSPELLALDPYC 265

Query: 197 KEIDIWSAGLILYNLLSGAQPFW 219
            + DIWSAGL+L+ +       +
Sbjct: 266 AKTDIWSAGLVLFEMSVKNVTLF 288

Length = 392

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 60.0 bits (145), Expect = 1e-09
 Identities = 40/105 (38%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
           AL   HS  I HRDLKP+N +   D    TLK  DFG A     G+     + +  Y AP
Sbjct: 182 ALAYIHSKFICHRDLKPQNLL--IDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAP 239

Query: 188 EL-LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           EL LG   Y   ID+WS G I+  ++ G   F  +S    L  I+
Sbjct: 240 ELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRII 284

Length = 440

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 58.9 bits (143), Expect = 1e-09
 Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 11/176 (6%)

Query: 110 RERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFF 168
           +    E     +  + V AL+       I+HRD+KP N +    D N  +K  DFG++  
Sbjct: 101 KSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL---DRNGNIKLCDFGISGQ 157

Query: 169 FEEGKVYEEVVGTPLYMAPELLGPC---KYGKEIDIWSAGLILYNLLSGAQPF--WAESL 223
             +        G   YMAPE + P     Y    D+WS G+ LY + +G  P+  W  S+
Sbjct: 158 LVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW-NSV 216

Query: 224 YGTLTAIMSREID-FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY 278
           +  LT ++  +     +      S S  + I   LI+D + +    ++L+HP++  
Sbjct: 217 FDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 18/50 (36%), Positives = 30/50 (60%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +E F+  D +  GT++ DE KA L  LG  L+E ++ + ++  D DG+G 
Sbjct: 3   REAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGK 52

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 40/162 (24%)

Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
            L  E+IQ+ KE F+  D +  G +  +E    L  LG   +E ++ +     +ID    
Sbjct: 13  QLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLF--EEIDAGNE 70

Query: 376 TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY------------ 423
           T+             DF  F      ++ + +      +EL  AFK +            
Sbjct: 71  TV-------------DFPEFL----TVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGE 113

Query: 424 ------NMGDDAT---IKEIMFEVDRDKDGRISYEEFCATMK 456
                 ++G+  +   +++++ E D D DG I YEEF   +K
Sbjct: 114 LRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIK 155

Length = 160

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 56.4 bits (137), Expect = 6e-09
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 133 HSNGIMHRDLKPEN-FIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPE 188
            S   +HRDL   N  +     EN  +K +DFGL+    +   Y    G  L   +MAPE
Sbjct: 119 ESKNFIHRDLAARNCLV----GENLVVKISDFGLSRDLYDDDYYR-KRGGKLPIRWMAPE 173

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
            L   K+  + D+WS G++L+ + + G QP+ 
Sbjct: 174 SLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYP 205

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 56.4 bits (136), Expect = 7e-09
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 13/141 (9%)

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---VYEEVVGTPL---YMAPELLG 191
           +HRDL   N +  +   N   K +DFGL+ F E+      Y   +G  +   + APE + 
Sbjct: 128 VHRDLAARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIA 184

Query: 192 PCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK 250
             K+    D+WS G++++ ++S G +P+W  S    + AI   E D++  P     ++  
Sbjct: 185 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI---EQDYRLPPPMDCPTALH 241

Query: 251 DLIRRMLIRDPNNQITVAQIL 271
            L+     +D N +    QI+
Sbjct: 242 QLMLDCWQKDRNARPKFGQIV 262

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 56.0 bits (136), Expect = 8e-09
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 18/134 (13%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHAC------HSNGIMHRDLKPEN-FI 148
           E+  GG L+D +    R       S+   +  AL          S   +HRDL   N  +
Sbjct: 81  EYMPGGDLLDYL----RKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV 136

Query: 149 FTTDDENATLKATDFGLAFFFEEGKVYEEVVGT-PL-YMAPELLGPCKYGKEIDIWSAGL 206
                EN  +K +DFGL+    +   Y+   G  P+ +MAPE L   K+  + D+WS G+
Sbjct: 137 ----GENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGV 192

Query: 207 ILYNLLS-GAQPFW 219
           +L+ + + G +P+ 
Sbjct: 193 LLWEIFTLGEEPYP 206

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 55.6 bits (134), Expect = 9e-09
 Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 26/196 (13%)

Query: 89  DEGYLKREHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKP 144
           D  +L  +H +GG L   IS      E   +R AA +    V AL A H  GI+ RDL P
Sbjct: 58  DSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEM----VVALDALHREGIVCRDLNP 113

Query: 145 ENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSA 204
            N +    D+   ++ T F      E+    E V    +Y APE+ G  +  +  D WS 
Sbjct: 114 NNILL---DDRGHIQLTYFSRWSEVEDSCDGEAV--ENMYCAPEVGGISEETEACDWWSL 168

Query: 205 GLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQ 264
           G IL+ LL+G      ++L     + ++         W  +S  A+ L++++L  +P  +
Sbjct: 169 GAILFELLTG------KTLVECHPSGINTHTTLNIPEW--VSEEARSLLQQLLQFNPTER 220

Query: 265 I-----TVAQILKHPW 275
           +      V  I  HP+
Sbjct: 221 LGAGVAGVEDIKSHPF 236

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)

Query: 410 YITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            I+ADEL+AA K    G  +  I E++ EVD+D DG+I +EEF   M 
Sbjct: 16  TISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELMA 63

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 57.2 bits (138), Expect = 1e-08
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 15/117 (12%)

Query: 176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI 235
           E ++GTP Y+APELL    +G  +D W+ G+ L+  L+G  PF  E+       I++R+I
Sbjct: 538 ERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDI 597

Query: 236 DFKSDPWP----TISSSAKDLIRRMLIRDPNNQITVAQILKHP------WLNYENGE 282
                PWP     +S +A++ I  +L  DP  +  + ++ +HP      W N +N  
Sbjct: 598 -----PWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHGVDWENLQNQT 649

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 56.0 bits (135), Expect = 3e-08
 Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)

Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY--EE 177
           ++ R ++ AL   HS GI+HRD+KP+N IF   + + + K  D G A     G  Y  +E
Sbjct: 259 TIMRQILFALDGLHSTGIVHRDVKPQNIIF--SEGSGSFKIIDLGAAADLRVGINYIPKE 316

Query: 178 VVGTPLYMAPE 188
            +  P Y APE
Sbjct: 317 FLLDPRYAAPE 327

Length = 566

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 55.5 bits (133), Expect = 4e-08
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV- 178
           ++ + ++ A+   H   ++HRD+K EN     D     +   DFG A  FE+ +   +  
Sbjct: 271 AIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD---GKIVLGDFGTAMPFEKEREAFDYG 327

Query: 179 -VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            VGT    +PE+L    Y +  DIWS GLIL ++LS
Sbjct: 328 WVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363

Length = 501

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 53.7 bits (130), Expect = 4e-08
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 7/91 (7%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPEL 189
            S   +HRDL   N +     E+  +K +DFGL+    +   Y +  G  L   +MAPE 
Sbjct: 122 ASKKFVHRDLAARNCLVG---EDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPES 178

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
           L    +  + D+WS G++L+ + + GA P+ 
Sbjct: 179 LKDGIFTSKSDVWSFGVLLWEIFTLGATPYP 209

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 53.4 bits (128), Expect = 5e-08
 Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 24/138 (17%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACH------SNGIMHRDLKPE 145
           Y+  E    G LV+ +  R R    A  SV + +  +L          S  ++HRDL   
Sbjct: 74  YIVMELMSKGNLVNFLRTRGR----ALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAAR 129

Query: 146 NFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL----YMAPELLGPCKYGKEIDI 201
           N + +   E+   K +DFGLA      +V    V        + APE L   K+  + D+
Sbjct: 130 NILVS---EDGVAKVSDFGLA------RVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDV 180

Query: 202 WSAGLILYNLLS-GAQPF 218
           WS G++L+ + S G  P+
Sbjct: 181 WSYGVLLWEVFSYGRAPY 198

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 53.9 bits (129), Expect = 6e-08
 Identities = 48/192 (25%), Positives = 72/192 (37%), Gaps = 34/192 (17%)

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPL 183
           ++  L   H   I+HRDLKP+N + +   E   LK  DFGLA         Y   V T  
Sbjct: 112 LLRGLSYIHQRYILHRDLKPQNLLISDTGE---LKLADFGLARAKSVPSHTYSNEVVTLW 168

Query: 184 YMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPF-WAESLYGTLTAIMSREIDFKSDP 241
           Y  P+ LLG  +Y   +D+W  G I   ++ G   F   + +   L  I         D 
Sbjct: 169 YRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDT 228

Query: 242 WPTISS----------------------------SAKDLIRRMLIRDPNNQITVAQILKH 273
           WP + S                             A+DL  ++L   P N+++    L H
Sbjct: 229 WPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288

Query: 274 PWLNYENGEAWD 285
            + +      W+
Sbjct: 289 EYFSDLPPRLWE 300

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 53.2 bits (128), Expect = 6e-08
 Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 92  YLKREHCDGGTLVDRISDRERYT-ERAAASVF-RSVVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E+   G+LVD +  R R     A    F   V   +        +HRDL   N + 
Sbjct: 76  YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARN-VL 134

Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL-YMAPELLGPCKYGKEIDIWSAGLIL 208
            ++D  A  K +DFGLA   +E    ++    P+ + APE L   K+  + D+WS G++L
Sbjct: 135 VSEDLVA--KVSDFGLA---KEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILL 189

Query: 209 YNLLS-GAQPFWAESLYGTLTAI 230
           + + S G  P+    L   +  +
Sbjct: 190 WEIYSFGRVPYPRIPLKDVVPHV 212

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 7/106 (6%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S+  +HRDL   N +     E  T+K +DFGL+        Y     + L   +M PE +
Sbjct: 142 SHHFVHRDLAARNCLV---GEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAI 198

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREI 235
              K+  E DIWS G++L+ + S G QP++  S    +  I SR++
Sbjct: 199 LYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQL 244

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 51.6 bits (124), Expect = 3e-07
 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 9/91 (9%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP-----LYMAP 187
            S   +HRDL   N +    +    +K +DFGLA    E K Y   V  P      + AP
Sbjct: 126 GSQRYIHRDLAARNILV---ESEDLVKISDFGLAKVLPEDKDYY-YVKEPGESPIFWYAP 181

Query: 188 ELLGPCKYGKEIDIWSAGLILYNLLSGAQPF 218
           E L   K+    D+WS G+ LY L +   P 
Sbjct: 182 ECLRTSKFSSASDVWSFGVTLYELFTYGDPS 212

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 51.0 bits (122), Expect = 4e-07
 Identities = 31/132 (23%), Positives = 63/132 (47%), Gaps = 9/132 (6%)

Query: 92  YLKREHCDGGTLVDRI-SDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           Y+  E+   G L++ +    +R+       + + V   +    S   +HRDL   N +  
Sbjct: 75  YIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV- 133

Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLI 207
             D+   +K +DFGL+ +  + + Y   VG+     +  PE+L   K+  + D+W+ G++
Sbjct: 134 --DDQGCVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVL 190

Query: 208 LYNLLS-GAQPF 218
           ++ + S G  P+
Sbjct: 191 MWEVYSLGKMPY 202

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 42/181 (23%), Positives = 63/181 (34%), Gaps = 22/181 (12%)

Query: 101 GTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLK 159
            +L D +  R R   E    +V    + AL   H              I  T D    LK
Sbjct: 1   VSLADILEVRGRPLNEEEIWAVCLQCLGALRELHRQAKSGN-------ILLTWD--GLLK 51

Query: 160 ATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFW 219
               G   F       E+    P +MAPE++    Y ++ DI+S G+ LY  L    P+ 
Sbjct: 52  L--DGSVAFKTP----EQSRPDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYN 105

Query: 220 AE----SLYGTLTAIMSREIDFKSDPWPTISS--SAKDLIRRMLIRDPNNQITVAQILKH 273
            E    ++   L   M  +          +S+  S +D +R    R P  +      L H
Sbjct: 106 EERELSAILEILLNGMPADDPRDRSNLEGVSAARSFEDFMRLCASRLPQRREAANHYLAH 165

Query: 274 P 274
            
Sbjct: 166 C 166

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 21/149 (14%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT---- 375
           ++ ++ +E F   DT+ SGT+   E K  +  LG    + ++KQ +   D DG+G     
Sbjct: 14  DQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFE 73

Query: 376 ------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY--NMGD 427
                 T  L     ++  LK F +F            +  I+   L+   KE    +  
Sbjct: 74  EFLDIMTKKLGERDPREEILKAFRLF-DDDK-------TGKISLKNLKRVAKELGETI-T 124

Query: 428 DATIKEIMFEVDRDKDGRISYEEFCATMK 456
           D  ++E++ E DR+ DG IS EEF   MK
Sbjct: 125 DEELQEMIDEADRNGDGEISEEEFYRIMK 153

Length = 158

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 51.1 bits (122), Expect = 5e-07
 Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV---GTPLY-MAPE 188
           HS   +HRDL   N +    D +  +K  DFGLA    EG  Y  V     +P++  A E
Sbjct: 124 HSQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVE 180

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPF 218
            L   K+    D+WS G+ LY LL+     
Sbjct: 181 CLKENKFSYASDVWSFGVTLYELLTHCDSK 210

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 50.8 bits (121), Expect = 5e-07
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 15/106 (14%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG---TPL-YMAPEL 189
           S   +HRDL   N + T   E   LK +DFG++   E+G VY    G    P+ + APE 
Sbjct: 112 SKHCIHRDLAARNCLVT---EKNVLKISDFGMSREEEDG-VYASTGGMKQIPVKWTAPEA 167

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSRE 234
           L   +Y  E D+WS G++L+   S GA P      Y  L+   +RE
Sbjct: 168 LNYGRYSSESDVWSFGILLWEAFSLGAVP------YANLSNQQTRE 207

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 50.0 bits (120), Expect = 1e-06
 Identities = 48/208 (23%), Positives = 78/208 (37%), Gaps = 53/208 (25%)

Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF---FFEE 171
           E A A + + V+NAL   HS G +HR +K  + + + D      K    GL +     + 
Sbjct: 100 ELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDG-----KVVLSGLRYSVSMIKH 154

Query: 172 GKVYEEVVGTPLY-------MAPELL-----GPCKYGKEIDIWSAGLILYNLLSGAQPF- 218
           GK    V   P         ++PE+L     G   Y ++ DI+S G+    L +G  PF 
Sbjct: 155 GKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQG---YNEKSDIYSVGITACELANGHVPFK 211

Query: 219 -------WAESLYGTLTAIMSREI----------DFKSDPWPTISSSAKDLIRRM----- 256
                    E + GT+  ++ +               S+  P    S      R      
Sbjct: 212 DMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHF 271

Query: 257 -------LIRDPNNQITVAQILKHPWLN 277
                  L RDP ++ + +Q+L H +  
Sbjct: 272 HQFVELCLQRDPESRPSASQLLNHSFFK 299

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 10/131 (7%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E+   G+LVD +  R R        +  S  V  A+    +N  +HRDL   N + 
Sbjct: 76  YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV 135

Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL-YMAPELLGPCKYGKEIDIWSAGLIL 208
           + D+     K +DFGL    +E    ++    P+ + APE L   K+  + D+WS G++L
Sbjct: 136 SEDN---VAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 189

Query: 209 YNLLS-GAQPF 218
           + + S G  P+
Sbjct: 190 WEIYSFGRVPY 200

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 50.1 bits (119), Expect = 2e-06
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 8/90 (8%)

Query: 106 RISD---RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
           +I D   +++        V R V+  L   H  GI+HRD+KPEN + T D +   +K  D
Sbjct: 296 KIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQ---VKIID 352

Query: 163 FGLAFFFEEGKVYEEVVGT--PLYMAPELL 190
           FG A     G  +  + G   P Y  PE L
Sbjct: 353 FGAAVDMCTGINFNPLYGMLDPRYSPPEEL 382

Length = 507

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 48.8 bits (116), Expect = 2e-06
 Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 13/180 (7%)

Query: 61  ESGRIYLCTENSTGLQFACKSISK----TSKSDEGYLKREHCDGGTLVDRISDRE-RYTE 115
           E  R    +E S   QF+  +I +     +K     +  E+ + G L   + D +  ++ 
Sbjct: 47  EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSS 106

Query: 116 RAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE---EG 172
                + R +   +        +HRDL   N +    + N   K +DFGL+   E   EG
Sbjct: 107 YQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV---NSNLECKVSDFGLSRVLEDDPEG 163

Query: 173 KVYEEVVGTPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAI 230
                    P+ + APE +   K+    D+WS G++++ ++S G +P+W  S +  + AI
Sbjct: 164 TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAI 223

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT---PL-YMAPELLGPC 193
           +HRDL   N +     EN  LK +DFG++   EEG +Y    G    P+ + APE L   
Sbjct: 115 IHRDLAARNCLV---GENNVLKISDFGMSRE-EEGGIYTVSDGLKQIPIKWTAPEALNYG 170

Query: 194 KYGKEIDIWSAGLILYNLLS-GAQPF 218
           +Y  E D+WS G++L+   S G  P+
Sbjct: 171 RYTSESDVWSYGILLWETFSLGDTPY 196

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           + R+ D E+ T +   S    V   +    S   +HRDL   N + T   EN  +K  DF
Sbjct: 126 IARVPD-EQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 181

Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA        Y++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 182 GLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 240

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 43.5 bits (103), Expect = 4e-06
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 410 YITADELEAAFKEYNMGD-----DATIKEIMFEVDRDKDGRISYEEFCATM 455
           YI  +EL    K   +       +  I+    E+D+D DGRIS+EEF   M
Sbjct: 10  YIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60

Length = 60

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 48.7 bits (116), Expect = 6e-06
 Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 36/149 (24%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--------------------SKS-- 88
           F I + + RG  G++YL  + +    +A K + K                     SKS  
Sbjct: 6   FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPF 65

Query: 89  -----------DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                      +  YL  E+  GG +   +     + E  A      V  AL   H +GI
Sbjct: 66  IVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGI 125

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLA 166
           +HRDLKP+N + + +     +K TDFGL+
Sbjct: 126 IHRDLKPDNMLISNEGH---IKLTDFGLS 151

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 46.9 bits (111), Expect = 8e-06
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)

Query: 92  YLKREHCDGGTLVDRI-SDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
            L  E  + G L D + + R ++++     +   V   +    S+ ++HRDL   N +  
Sbjct: 75  CLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG 134

Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLI 207
              EN  +K +DFG+  F  + + Y    GT     + +PE+    KY  + D+WS G++
Sbjct: 135 ---ENQVVKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVL 190

Query: 208 LYNLLS-GAQPF 218
           ++ + S G  P+
Sbjct: 191 MWEVFSEGKTPY 202

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 46.8 bits (111), Expect = 1e-05
 Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 9/144 (6%)

Query: 92  YLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           Y+  E  + G L++ +  R+ + ++    S+ + V   +     N  +HRDL   N + +
Sbjct: 75  YIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS 134

Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLI 207
                  +K +DFG+  +  + + Y    G      +  PE+    KY  + D+WS G++
Sbjct: 135 ---STGVVKVSDFGMTRYVLDDE-YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVL 190

Query: 208 LYNLLS-GAQPFWAESLYGTLTAI 230
           ++ + + G  PF  +S Y  +  I
Sbjct: 191 MWEVFTEGKMPFEKKSNYEVVEMI 214

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 8/100 (8%)

Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG--KVYEEVVGT-PL-YMAPELLG 191
           G +HRDL   N +  +   N   K +DFGL+   E+     Y    G  P+ + APE + 
Sbjct: 126 GYVHRDLAARNILVNS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 182

Query: 192 PCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAI 230
             K+    D+WS G++++ ++S G +P+W  S    + AI
Sbjct: 183 YRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAI 222

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 14/105 (13%)

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF--FFEEGKVYEEVVGTP 182
           V + L   H    +H DL   N   T D    ++K  D+GLA   + E+  + ++    P
Sbjct: 109 VASGLLWLHQADFIHSDLALRNCQLTAD---LSVKIGDYGLALEQYPEDYYITKDCHAVP 165

Query: 183 L-YMAPEL-------LGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           L ++APEL       L P    K+ +IWS G+ ++ L +   QP+
Sbjct: 166 LRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPY 210

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 7/89 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL-YMAPELL 190
           S   +HRDL   N + +   EN  +K  DFGLA   + +   V +     PL +MAPE +
Sbjct: 192 SRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESI 248

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
               Y  + D+WS G++L+ + S GA P+
Sbjct: 249 FDKVYTTQSDVWSFGVLLWEIFSLGASPY 277

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 46.6 bits (110), Expect = 2e-05
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
           E+ T +   S    V   +    S   +HRDL   N + T D+    +K  DFGLA    
Sbjct: 129 EQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDN---VMKIADFGLARDVH 185

Query: 171 EGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
               Y++     L   +MAPE L    Y  + D+WS G++L+ + + G  P+
Sbjct: 186 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL-YMAPELLGP 192
               +HRDL   N +     E+   K  DFGLA   +E          P  + APE    
Sbjct: 122 EQNSIHRDLAARNILV---GEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASH 178

Query: 193 CKYGKEIDIWSAGLILYNLLS-GAQPF 218
             +  + D+WS G++LY + + G  P+
Sbjct: 179 GTFSTKSDVWSFGILLYEMFTYGQVPY 205

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPEL 189
            +   +HRDL   N +   D    T+K  DFG+     E   Y +     L   +MAPE 
Sbjct: 136 AAKKFVHRDLAARNCMVAEDL---TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES 192

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           L    +  + D+WS G++L+ + +   QP+
Sbjct: 193 LKDGVFTTKSDVWSFGVVLWEMATLAEQPY 222

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
           E+ + +   S    V   +    S   +HRDL   N + T D+    +K  DFGLA    
Sbjct: 129 EQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDN---VMKIADFGLARGVH 185

Query: 171 EGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           +   Y++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 186 DIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPY 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 19/188 (10%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 78  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 137

Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGT--PL-YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G   P+ + APE L   K+  + D+W+ G+
Sbjct: 138 G---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 193

Query: 207 ILYNLLS-GAQPFWAESL---YGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN 262
           +L+ + + G  P+    L   Y  L      E  ++ +          +L+R     +P+
Sbjct: 194 LLWEIATYGMSPYPGIDLSQVYELL------EKGYRMERPEGCPPKVYELMRACWQWNPS 247

Query: 263 NQITVAQI 270
           ++ + A+I
Sbjct: 248 DRPSFAEI 255

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 9/91 (9%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA---FFFEEGKVYEEV-VGTPL-YMAPE 188
           S   +HRDL   N +    DE+ T+K  DFGLA   +  E   V+       P+ +MA E
Sbjct: 116 SKKFVHRDLAARNCML---DESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALE 172

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 173 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 203

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N + T D+    +K  DFGLA        Y++     L   +MAPE L
Sbjct: 158 SKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 214

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
               Y  + D+WS G++L+ + + G  P+
Sbjct: 215 FDRIYTHQSDVWSFGVLLWEIFTLGGSPY 243

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 45.7 bits (108), Expect = 3e-05
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 7/84 (8%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV---VGTPLY-MAPEL 189
           S   +HRDL   N +   + E+  +K  DFGL    E  K Y  V   + +P++  APE 
Sbjct: 127 SRQYVHRDLAARNVL--VESEH-QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPEC 183

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS 213
           L   K+    D+WS G+ LY LL+
Sbjct: 184 LIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif

 Score = 40.4 bits (96), Expect = 3e-05
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 431 IKEIMFEVDRDKDGRISYEEFCATMKT 457
           +KE     D+D DG+I +EEF   +K 
Sbjct: 2   LKEAFRLFDKDGDGKIDFEEFKDLLKA 28

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 45.2 bits (108), Expect = 3e-05
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 9/107 (8%)

Query: 133 HSNGIMHRDLKPEN-FIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPE 188
            S   +HRDL   N  +     EN  +K +DFGL+    E   Y +  G  L   +MAPE
Sbjct: 119 ESKNFVHRDLAARNCLV----TENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPE 174

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSRE 234
            L   K+  + D+WS G++L+ + + G QP+   S    L  +    
Sbjct: 175 SLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGY 221

Length = 258

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 45.2 bits (107), Expect = 4e-05
 Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 15/155 (9%)

Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRI-SDRERYTERAAASVFRS-VVN 127
           EN   L  AC      +      +  E+C  G L++ +   RE +        F   V  
Sbjct: 99  ENIVNLLGAC------TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAK 152

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL-Y 184
            +    S   +HRDL   N + T       +K  DFGLA     +   V +     P+ +
Sbjct: 153 GMAFLASKNCIHRDLAARNVLLT---HGKIVKICDFGLARDIMNDSNYVVKGNARLPVKW 209

Query: 185 MAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           MAPE +  C Y  E D+WS G++L+ + S G+ P+
Sbjct: 210 MAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPY 244

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|200946 pfam00036, efhand, EF hand

 Score = 39.7 bits (94), Expect = 6e-05
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 431 IKEIMFEVDRDKDGRISYEEFCATMKT 457
           +KE   E D+D DG+IS+EEF   +K 
Sbjct: 2   LKEAFKEFDKDGDGKISFEEFKELLKK 28

The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 44.0 bits (104), Expect = 7e-05
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 8/85 (9%)

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCK 194
           +HRDL   N +     EN   K  DFGLA   +E  +YE   G      + APE     +
Sbjct: 125 IHRDLAARNVLV---GENNICKVADFGLARVIKE-DIYEAREGAKFPIKWTAPEAALYNR 180

Query: 195 YGKEIDIWSAGLILYNLLS-GAQPF 218
           +  + D+WS G++L  +++ G  P+
Sbjct: 181 FSIKSDVWSFGILLTEIVTYGRMPY 205

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 44.6 bits (105), Expect = 7e-05
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 7/89 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL-YMAPELL 190
           S   +HRDL   N + +   EN  +K  DFGLA   + +   V +     PL +MAPE +
Sbjct: 197 SRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 253

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
               Y  + D+WS G++L+ + S GA P+
Sbjct: 254 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 282

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 44.5 bits (105), Expect = 8e-05
 Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT---PL-YMAPEL 189
           S   +HRDL   N + T        K  DFGLA        Y  V G    P+ +MAPE 
Sbjct: 232 SKNCIHRDLAARNILLT---HGRITKICDFGLARDIRNDSNYV-VKGNARLPVKWMAPES 287

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           +  C Y  E D+WS G++L+ + S G+ P+
Sbjct: 288 IFNCVYTFESDVWSYGILLWEIFSLGSSPY 317

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 44.0 bits (104), Expect = 8e-05
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT--PL-YMAPELL 190
           SNG +HRDL   N +     E+  +K +DFGLA +  + + Y    GT  P+ +  PE+ 
Sbjct: 118 SNGFIHRDLAARNCLV---GEDNVVKVSDFGLARYVLDDQ-YTSSQGTKFPVKWAPPEVF 173

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
              ++  + D+WS G++++ + S G  P+
Sbjct: 174 DYSRFSSKSDVWSFGVLMWEVFSEGKMPY 202

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair

 Score = 39.8 bits (94), Expect = 8e-05
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 410 YITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            IT +EL+ A     +   +  +  +  E D D DG+IS+EEFC  ++
Sbjct: 4   LITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQ 51

Length = 53

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 43.4 bits (102), Expect = 1e-04
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE--VVGTPL-YMAPELL 190
           S   +HRDL   N +     EN  LK +DFG++   E+  +Y    +   P+ + APE L
Sbjct: 111 SKNCIHRDLAARNCLV---GENNVLKISDFGMSRQ-EDDGIYSSSGLKQIPIKWTAPEAL 166

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
              +Y  E D+WS G++L+   S G  P+
Sbjct: 167 NYGRYSSESDVWSYGILLWETFSLGVCPY 195

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 43.9 bits (104), Expect = 1e-04
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 7/87 (8%)

Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVYEEVVG-TPL-YMAPELLGP 192
            ++HRDL   N +  T      +K TDFGLA   +   K Y    G  P+ +MA E +  
Sbjct: 129 RLVHRDLAARNVLVKTPQH---VKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILH 185

Query: 193 CKYGKEIDIWSAGLILYNLLS-GAQPF 218
             Y  + D+WS G+ ++ L++ GA+P+
Sbjct: 186 RIYTHKSDVWSYGVTVWELMTFGAKPY 212

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 16/129 (12%)

Query: 100 GGTLVDRISDRERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDD---EN 155
           G  L+D I     ++ R  A +      AL   H+   +MH DLKPEN +  T D   + 
Sbjct: 215 GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDP 274

Query: 156 ATLKAT----------DFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAG 205
            T +A           D G     +E      +V T  Y +PE++    +    D+WS G
Sbjct: 275 VTNRALPPDPCRVRICDLGGCC--DERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMG 332

Query: 206 LILYNLLSG 214
            I+Y L +G
Sbjct: 333 CIIYELYTG 341

Length = 467

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 13/159 (8%)

Query: 93  LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD 152
           ++  H D G+  D  + +          +   +   +    S+ ++H+DL   N +   D
Sbjct: 101 MRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRN-VLVFD 159

Query: 153 DENATLKATDFGLAFFFEE--GKVYEEVVGTPL----YMAPELLGPCKYGKEIDIWSAGL 206
             N  +K +D GL   F E     Y +++G  L    +M+PE +   K+  + DIWS G+
Sbjct: 160 KLN--VKISDLGL---FREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGV 214

Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPT 244
           +L+ + S G QP+   S    +  I +R++    D  P 
Sbjct: 215 VLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPA 253

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 14/95 (14%)

Query: 138 MHRDLKPENFIFTTDDENA--TLKATDFGLA-------FFFEEGKVYEEVVGTPLYMAPE 188
           +HRDL   N + +    +A   +K  DFGLA       ++ +EG+    V     +MAPE
Sbjct: 128 IHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPV----RWMAPE 183

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAES 222
            L   K+  + D+WS G++++ +L+ G QP+ A +
Sbjct: 184 SLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN 218

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 43.1 bits (102), Expect = 2e-04
 Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 16/145 (11%)

Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYEEVVG-TPL-YMAPELLGP 192
             +HRDL   N +    + N   K +DFGL+   E+ +  Y    G  P+ + APE +  
Sbjct: 126 NYVHRDLAARNILV---NSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAY 182

Query: 193 CKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD 251
            K+    D+WS G++++ ++S G +P+W  S    + A+   E  ++  P P    SA  
Sbjct: 183 RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV---EDGYRLPP-PMDCPSA-- 236

Query: 252 LIRRML---IRDPNNQITVAQILKH 273
           L + ML    +D N + T +QI+  
Sbjct: 237 LYQLMLDCWQKDRNERPTFSQIVST 261

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 18/134 (13%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFR------SVVNALHACHSNGIMHRDLKPENFIF 149
           E    G+L+DR+             +         + N +    S   +HRDL   N + 
Sbjct: 75  ELAPLGSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILL 130

Query: 150 TTDDENATLKATDFGLAFFFEEGK---VYEEVVGTPL-YMAPELLGPCKYGKEIDIWSAG 205
            +DD    +K  DFGL     + +   V EE +  P  + APE L    +    D+W  G
Sbjct: 131 ASDD---KVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFG 187

Query: 206 LILYNLLS-GAQPF 218
           + L+ + + G +P+
Sbjct: 188 VTLWEMFTYGEEPW 201

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 9/81 (11%)

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP-----LYMAPELLGP 192
           +HRDL   N +  ++     +K  DFGL     + K Y   V  P      + APE L  
Sbjct: 130 VHRDLATRNILVESE---NRVKIGDFGLTKVLPQDKEYY-KVREPGESPIFWYAPESLTE 185

Query: 193 CKYGKEIDIWSAGLILYNLLS 213
            K+    D+WS G++LY L +
Sbjct: 186 SKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 42.8 bits (100), Expect = 2e-04
 Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 17/138 (12%)

Query: 83  SKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDL 142
           S+  ++D  +    +    TL  +      +    A          +        +HRDL
Sbjct: 90  SRVLETDPAF-AIANSTASTLSSQ--QLLHFAADVA--------RGMDYLSQKQFIHRDL 138

Query: 143 KPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL-YMAPELLGPCKYGKEIDI 201
              N +     EN   K  DFGL+   +E  V + +   P+ +MA E L    Y    D+
Sbjct: 139 AARNILV---GENYVAKIADFGLSRG-QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDV 194

Query: 202 WSAGLILYNLLS-GAQPF 218
           WS G++L+ ++S G  P+
Sbjct: 195 WSYGVLLWEIVSLGGTPY 212

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 18/138 (13%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFR----SVVNALHACHSNGIMHRDLKPENFIFTT 151
           E+C+ G L   +S  + +   +   + +     +   +   H +  +H DL   N   T+
Sbjct: 75  EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTS 134

Query: 152 DDENATLKATDFGLAF--FFEEGKVYEEVVGTPL-YMAPELLGPCKYG-------KEIDI 201
           D    T+K  D+G+    + E+    E+    PL ++APEL+G    G       K  ++
Sbjct: 135 D---LTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNV 191

Query: 202 WSAGLILYNLL-SGAQPF 218
           W+ G+ L+ L  + AQP+
Sbjct: 192 WALGVTLWELFENAAQPY 209

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
             D     E  T++   S    V   +    S   +HRDL   N + T   E+  +K  D
Sbjct: 119 PDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT---EDHVMKIAD 175

Query: 163 FGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           FGLA        Y +     L   +MAPE L    Y  + D+WS G++L+ + + G  P+
Sbjct: 176 FGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY 235

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT-PL-YM 185
           AL    S   +HRD+   N + ++ D    +K  DFGL+ + E+   Y+   G  P+ +M
Sbjct: 119 ALAYLESKRFVHRDIAARNVLVSSPD---CVKLGDFGLSRYLEDESYYKASKGKLPIKWM 175

Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           APE +   ++    D+W  G+ ++ +L  G +PF
Sbjct: 176 APESINFRRFTSASDVWMFGVCMWEILMLGVKPF 209

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)

Query: 135 NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE--EVVGTPL-YMAPELLG 191
              +HRDL   N +     EN  +K  DFGL+        Y+  E    P+ +M PE + 
Sbjct: 149 RKFVHRDLATRNCLVG---ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIF 205

Query: 192 PCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
             +Y  E D+W+ G++L+ + S G QP++
Sbjct: 206 YNRYTTESDVWAYGVVLWEIFSYGMQPYY 234

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 24/98 (24%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTP 182
           +   ++    + ++HR+L   N +  +D   + ++  DFG+A   + ++ K +     TP
Sbjct: 118 IAKGMYYLEEHRMVHRNLAARNILLKSD---SIVQIADFGVADLLYPDDKKYFYSEHKTP 174

Query: 183 L-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           + +MA E +   +Y  + D+WS G+ ++ ++S GA+P+
Sbjct: 175 IKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPY 212

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 7/89 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL-YMAPELL 190
           S   +HRDL   N + +   EN  +K  DFGLA   + +   V +     PL +MAPE +
Sbjct: 191 SRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESI 247

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
               Y  + D+WS G++L+ + S GA P+
Sbjct: 248 FDKVYTTQSDVWSFGVLLWEIFSLGASPY 276

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 17/138 (12%)

Query: 83  SKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDL 142
           S+  ++D  +  +EH    TL          T +        V   +        +HRDL
Sbjct: 97  SRVLETDPAF-AKEHGTASTL----------TSQQLLQFASDVATGMQYLSEKQFIHRDL 145

Query: 143 KPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL-YMAPELLGPCKYGKEIDI 201
              N +     EN   K  DFGL+   EE  V + +   P+ +MA E L    Y  + D+
Sbjct: 146 AARNVLV---GENLASKIADFGLSRG-EEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDV 201

Query: 202 WSAGLILYNLLS-GAQPF 218
           WS G++L+ ++S G  P+
Sbjct: 202 WSFGVLLWEIVSLGGTPY 219

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S+  +H+DL   N +     E   +K +D GL+        Y     + L   +M PE +
Sbjct: 142 SHFFVHKDLAARNILI---GEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAI 198

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREI 235
              K+  + DIWS G++L+ + S G QP++  S    +  +  R++
Sbjct: 199 MYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQL 244

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF 168
           HS GI+H DL   N I +       +   DFGLA F
Sbjct: 112 HSAGIIHGDLTTSNMILSGGK----IYLIDFGLAEF 143

Length = 211

>gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 11/80 (13%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D   +  E+ +G  L D I +           + R +   +   H  GI+H DL   N I
Sbjct: 70  DNKTIVMEYIEGKPLKDVIEEGN-------DELLREIGRLVGKLHKAGIVHGDLTTSNII 122

Query: 149 FTTDDENATLKATDFGLAFF 168
              D     L   DFGL  +
Sbjct: 123 VRDDK----LYLIDFGLGKY 138

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 307 KLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLS 350
           K ALK + E L  EEI    E  +++D +  G + ++EF   ++
Sbjct: 23  KAALKSLGEGLSEEEID---EMIREVDKDGDGKIDFEEFLELMA 63

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 37.7 bits (88), Expect = 5e-04
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 330 KQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQ----YMQAADIDGNG 374
           K +D +  G +  +E +  L  LG  LT+ +V++         D DG+G
Sbjct: 1   KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDG 49

Length = 60

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 41.5 bits (97), Expect = 5e-04
 Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 16/143 (11%)

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL-YMAPELLGPC 193
           ++HRDL   N +     E   +K +DFGL+   + E+  V       P+ +MA E L   
Sbjct: 148 LVHRDLAARNVLVA---EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDH 204

Query: 194 KYGKEIDIWSAGLILYNLLS-GAQPFWA---ESLYGTLTAIMSREIDFKSDPWPTISSSA 249
            Y  + D+WS G++L+ +++ G  P+     E L+  L      +  ++ +     S   
Sbjct: 205 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLL------KTGYRMERPENCSEEM 258

Query: 250 KDLIRRMLIRDPNNQITVAQILK 272
            +L+     ++P+ + T A I K
Sbjct: 259 YNLMLTCWKQEPDKRPTFADISK 281

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|236586 PRK09605, PRK09605, bifunctional UGMP family protein/serine/threonine protein kinase; Validated

 Score = 42.2 bits (100), Expect = 5e-04
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 12/80 (15%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           +E  +  E+  G  L D +        +    V +         H  GI+H DL   NFI
Sbjct: 409 EEKTIVMEYIGGKDLKDVLEGNPELVRKVGEIVAK--------LHKAGIVHGDLTTSNFI 460

Query: 149 FTTDDENATLKATDFGLAFF 168
               D+   L   DFGL  +
Sbjct: 461 V--RDDRLYL--IDFGLGKY 476

Length = 535

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 41.2 bits (96), Expect = 8e-04
 Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 7/86 (8%)

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVG-TPL-YMAPELLGPC 193
           ++HRDL   N +  + +    +K TDFGLA   E + K Y    G  P+ +MA E +   
Sbjct: 130 LVHRDLAARNVLVKSPNH---VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 186

Query: 194 KYGKEIDIWSAGLILYNLLS-GAQPF 218
           K+  + D+WS G+ ++ L++ G +P+
Sbjct: 187 KFTHQSDVWSYGVTIWELMTFGGKPY 212

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain

 Score = 36.4 bits (85), Expect = 0.001
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLG 353
           +E FK  D +  G ++ +E +  L  LG
Sbjct: 3   REAFKLFDKDGDGYISAEELRKALRSLG 30

Length = 30

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 7/93 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N +     EN  +K  DFG++        Y     T L   +M PE +
Sbjct: 138 SQHFVHRDLATRNCLV---GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI 194

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAES 222
              K+  E D+WS G++L+ + + G QP++  S
Sbjct: 195 MYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS 227

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 11/80 (13%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D G +  E+ +G  L D         E A   + R V   +   H  GI+H DL   N I
Sbjct: 72  DNGLIVMEYIEGELLKD-------ALEEARPDLLREVGRLVGKLHKAGIVHGDLTTSNII 124

Query: 149 FTTDDENATLKATDFGLAFF 168
            +       +   DFGL  F
Sbjct: 125 LSGGR----IYFIDFGLGEF 140

Length = 204

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 8/110 (7%)

Query: 114 TERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           TE+    +   V   +        +HRDL   N +  T       K +DFGL+      +
Sbjct: 93  TEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH---YAKISDFGLSKALGADE 149

Query: 174 VYEEVVGT---PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            Y +       P+ + APE +   K+  + D+WS G++++   S G +P+
Sbjct: 150 NYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPY 199

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 39.8 bits (93), Expect = 0.003
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT---PL-YMAPEL 189
           S   +HRD+   N + T   +    K  DFGLA        Y  V G    P+ +MAPE 
Sbjct: 230 SKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNYV-VKGNARLPVKWMAPES 285

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           +  C Y  + D+WS G++L+ + S G  P+
Sbjct: 286 IFDCVYTVQSDVWSYGILLWEIFSLGKSPY 315

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 39.2 bits (91), Expect = 0.003
 Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 7/86 (8%)

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFE--EGKVYEEVVGTPL-YMAPELLGPC 193
           ++HRDL   N +  + +    +K TDFGLA   +  E + + +    P+ +MA E +   
Sbjct: 130 LVHRDLAARNVLVKSPNH---VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHR 186

Query: 194 KYGKEIDIWSAGLILYNLLS-GAQPF 218
           ++  + D+WS G+ ++ L++ GA+P+
Sbjct: 187 RFTHQSDVWSYGVTVWELMTFGAKPY 212

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 39.6 bits (92), Expect = 0.003
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 7/86 (8%)

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFF--EEGKVYEEVVGTPL-YMAPELLGPC 193
           ++HRDL   N +  T      +K TDFGLA     +E + + E    P+ +MA E +   
Sbjct: 130 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHR 186

Query: 194 KYGKEIDIWSAGLILYNLLS-GAQPF 218
            Y  + D+WS G+ ++ L++ G++P+
Sbjct: 187 IYTHQSDVWSYGVTVWELMTFGSKPY 212

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 39.2 bits (91), Expect = 0.003
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 9/124 (7%)

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL- 183
           + + +   ++N  +HRDL   N +     E+ T+K  DFG+     E   Y +  G  L 
Sbjct: 128 IADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKG-GKGLL 183

Query: 184 ---YMAPELLGPCKYGKEIDIWSAGLILYNLLSGA-QPFWAESLYGTLTAIMSREIDFKS 239
              +M+PE L    +    D+WS G++L+ + + A QP+   S    L  +M   +  K 
Sbjct: 184 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKP 243

Query: 240 DPWP 243
           D  P
Sbjct: 244 DNCP 247

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|200946 pfam00036, efhand, EF hand

 Score = 34.3 bits (80), Expect = 0.004
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKL 352
           KE FK+ D +  G ++++EFK  L KL
Sbjct: 3   KEAFKEFDKDGDGKISFEEFKELLKKL 29

The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29

>gnl|CDD|238131 cd00213, S-100, S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

 Score = 36.3 bits (85), Expect = 0.004
 Identities = 10/29 (34%), Positives = 19/29 (65%)

Query: 424 NMGDDATIKEIMFEVDRDKDGRISYEEFC 452
           N  D   + +IM ++D +KDG++ ++EF 
Sbjct: 46  NQKDPEAVDKIMKDLDVNKDGKVDFQEFL 74

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents the interaction site of S100 proteins with their target proteins. There is experimental evidence showing that many S100 proteins have multiple binding partners with diverse mode of interaction with different targets. In addition to S100 proteins (such as S100A1,-3,-4,-6,-7,-10,-11,and -13), this group includes the ''fused'' gene family, a group of calcium binding S100-related proteins. The ''fused'' gene family includes multifunctional epidermal differentiation proteins - profilaggrin, trichohyalin, repetin, hornerin, and cornulin; functionally these proteins are associated with keratin intermediate filaments and partially crosslinked to the cell envelope. These ''fused'' gene proteins contain N-terminal sequence with two Ca-binding EF-hands motif, which may be associated with calcium signaling in epidermal cells and autoprocessing in a calcium-dependent manner. In contrast to S100 proteins, "fused" gene family proteins contain an extraordinary high number of almost perfect peptide repeats with regular array of polar and charged residues similar to many known cell envelope proteins. Length = 88

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	483
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.98
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.98
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.98
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.98
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.98
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.97
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.97
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.97
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.97
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.97
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.97
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.97
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.97
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.97
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.97
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.97
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.97
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.97
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.97
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.96
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.96
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.96
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.96
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.96
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.95
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.95
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.95
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.95
PLN00181	793	protein SPA1-RELATED; Provisional	99.95
KOG1152	772	consensus Signal transduction serine/threonine kin	99.94
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.94
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.94
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.94
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.94
KOG3653	534	consensus Transforming growth factor beta/activin	99.94
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.93
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.93
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.92
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.91
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.9
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.9
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.89
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.88
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.87
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.87
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.87
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.86
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.86
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.84
PRK09188	365	serine/threonine protein kinase; Provisional	99.83
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.82
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.82
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.82
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.79
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.79
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.78
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.77
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	99.77
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	99.74
smart00090	237	RIO RIO-like kinase.	99.7
PTZ00184	149	calmodulin; Provisional	99.69
PRK12274	218	serine/threonine protein kinase; Provisional	99.68
PTZ00183	158	centrin; Provisional	99.68
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	99.65
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.64
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.63
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.6
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.56
PRK14879	211	serine/threonine protein kinase; Provisional	99.55
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.55
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.55
PRK10345	210	hypothetical protein; Provisional	99.54
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.52
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.5
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	99.45
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.41
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	99.39
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.35
KOG0036	463	consensus Predicted mitochondrial carrier protein	99.34
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.24
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	99.23
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.23
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.22
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.22
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.22
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	99.19
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.13
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	99.11
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	99.06
COG4248	637	Uncharacterized protein with protein kinase and he	99.05
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.04
PLN02964	644	phosphatidylserine decarboxylase	98.97
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.93
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	98.92
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	98.91
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	98.9
KOG3087	229	consensus Serine/threonine protein kinase [General	98.89
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	98.87
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.84
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	98.84
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.82
cd00052	67	EH Eps15 homology domain; found in proteins implic	98.81
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	98.81
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	98.76
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	98.74
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	98.73
cd00213	88	S-100 S-100: S-100 domain, which represents the la	98.72
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	98.7
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	98.65
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.65
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	98.59
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	98.56
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	98.56
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.55
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	98.54
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.53
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.52
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.5
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	98.48
PF14658	66	EF-hand_9: EF-hand domain	98.47
KOG0038	189	consensus Ca2+-binding kinase interacting protein	98.45
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.43
KOG1243	690	consensus Protein kinase [General function predict	98.4
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.38
KOG0040	2399	consensus Ca2+-binding actin-bundling protein (spe	98.35
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	98.33
PTZ00183	158	centrin; Provisional	98.33
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	98.32
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	98.29
KOG0041	244	consensus Predicted Ca2+-binding protein, EF-Hand	98.24
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.19
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.16
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.15
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.14

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.5e-52  Score=397.81  Aligned_cols=232  Identities=36%  Similarity=0.593  Sum_probs=214.4

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------------   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------------   89 (483)
                      .+.+.|.+.+.||+|+||.|.+|..+.||+.||||++.+.....                                    
T Consensus       169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~  248 (475)
T KOG0615|consen  169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP  248 (475)
T ss_pred             hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence            37788999999999999999999999999999999998764211                                    


Q ss_pred             -cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           90 -EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        90 -~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                       ..|+||||+.||+|.+++..++.+.+..-+.+++||+.|+.|||++||+||||||+|||+.++.+...+||+|||+|..
T Consensus       249 ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~  328 (475)
T KOG0615|consen  249 DSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV  328 (475)
T ss_pred             CceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence             0199999999999999999999999999999999999999999999999999999999998776778999999999999


Q ss_pred             ccCCceecccccCCcccCccccCCCCC---CCcCchHHHHHHHHHHhhCCCCCCCCChHH-HHHHHHccccCCCCCCCCC
Q 048594          169 FEEGKVYEEVVGTPLYMAPELLGPCKY---GKEIDIWSAGLILYNLLSGAQPFWAESLYG-TLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DiwslGvil~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~  244 (483)
                      ...+....+.||||.|.|||++....+   ..++|+||+||+||-+|+|.+||.+..... +.+.|..+.+.+.+..|..
T Consensus       329 ~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~  408 (475)
T KOG0615|consen  329 SGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDR  408 (475)
T ss_pred             cccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhh
Confidence            888888899999999999999976553   348899999999999999999998876665 8899999999999999999


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ++.++.+||.+||..||++|||++|+|+||||+
T Consensus       409 Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~  441 (475)
T KOG0615|consen  409 ISEEALDLINWMLVVDPENRPSADEALNHPWFK  441 (475)
T ss_pred             hhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence            999999999999999999999999999999998

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-53  Score=376.89  Aligned_cols=270  Identities=37%  Similarity=0.654  Sum_probs=244.2

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------CeE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GYL   93 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~l   93 (483)
                      .|.+.|.+.++||+|.|+.|++|.+..||+.+|+|++........                                .|+
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl   87 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL   87 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence            467789999999999999999999999999999999865432111                                199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |+|++.|++|..-|..+.-++|..+..+++||+++|.|||.+||||||+||+|+++.+.+...-+||+|||+|..+..+.
T Consensus        88 vFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~  167 (355)
T KOG0033|consen   88 VFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE  167 (355)
T ss_pred             EEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc
Confidence            99999999999888777789999999999999999999999999999999999999998888899999999999998777


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ......|||.|||||++...+|+..+|||+.|||||-||.|++||++.+....++.|+.+.+.++.+.|+++++++++||
T Consensus       168 ~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~Lv  247 (355)
T KOG0033|consen  168 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLI  247 (355)
T ss_pred             ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHH
Confidence            77788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcCCCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHhhhc
Q 048594          254 RRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVEN  316 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~l~~i~~~  316 (483)
                      .+||..||.+|+|+.|+|+|||+......+..... ...+..+++|.+..|++..++..+...
T Consensus       248 rrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~-~dtvd~lrkfNarRKLKgavLtav~s~  309 (355)
T KOG0033|consen  248 RRMLTVNPKKRITADEALKHPWICNRERVASAIHR-QDTVDCLKKFNARRKLKGAILTTVIAT  309 (355)
T ss_pred             HHHhccChhhhccHHHHhCCchhcchHHHHHHhhh-HHHHHHHHHhhHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999855444444443 446788999999999999988877553

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-48  Score=383.96  Aligned_cols=290  Identities=49%  Similarity=0.862  Sum_probs=260.2

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------   90 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------   90 (483)
                      ....+...|.+.+.||+|.||.||+|+++.||..+|+|++.+......                                
T Consensus        29 ~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~  108 (382)
T KOG0032|consen   29 FSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP  108 (382)
T ss_pred             ccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC
Confidence            457888999999999999999999999999999999999988764221                                


Q ss_pred             --CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCC-CCcEEEeecccce
Q 048594           91 --GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE-NATLKATDFGLAF  167 (483)
Q Consensus        91 --~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~-~~~ikl~Dfg~a~  167 (483)
                        .|+|||+|.||+|.+.+... .++|..+..++.||+.+++|||+.||+||||||+|+|+..... ++.+|++|||++.
T Consensus       109 ~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~  187 (382)
T KOG0032|consen  109 DSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK  187 (382)
T ss_pred             CeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence              19999999999999999877 4999999999999999999999999999999999999987544 4689999999999


Q ss_pred             eccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      ....+......+||+.|+|||++....|+..+|+||+||++|.|++|.+||++.+.......|..+.+.+..++|+.++.
T Consensus       188 ~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~  267 (382)
T KOG0032|consen  188 FIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISE  267 (382)
T ss_pred             EccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCH
Confidence            98887788889999999999999988999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCCCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHhhhccchHHHhhHHH
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKE  327 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~l~~i~~~~~~~~~~~l~~  327 (483)
                      .+++||.+||..||.+|+|+.++|+|||++ ........+.......+.+++..++++++.+........+   +..++.
T Consensus       268 ~akd~i~~ll~~dp~~R~ta~~~L~HpWi~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  343 (382)
T KOG0032|consen  268 SAKDFIRKLLEFDPRKRLTAAQALQHPWIK-SIGEATNIPLDISVLSRSKQFLSMSKLKKLALRVLAESLS---ISGLKE  343 (382)
T ss_pred             HHHHHHHHhcccCcccCCCHHHHhcCcccc-CCcccccccccchhhhhHHHHHHHHHHHHHHHHHHhhhhh---HHHHHH
Confidence            999999999999999999999999999998 3334444555566667778888888888877777766655   788999


Q ss_pred             HHhhcCCCCC
Q 048594          328 TFKQMDTNDS  337 (483)
Q Consensus       328 ~F~~~D~d~~  337 (483)
                      .|..+|.+++
T Consensus       344 ~~~~~~~~~~  353 (382)
T KOG0032|consen  344 MFKLMDTDNN  353 (382)
T ss_pred             HHHhhccccc
Confidence            9999998877

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=9.2e-49  Score=369.55  Aligned_cols=226  Identities=33%  Similarity=0.589  Sum_probs=205.6

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc---------------------------------CeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE---------------------------------GYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~---------------------------------~~lv   94 (483)
                      .++|.++++||+|+||+||+++.+.|++.||+|++++......                                 .|+|
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            3689999999999999999999999999999999988653222                                 1999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec-cCCc
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~-~~~~  173 (483)
                      +||+.||+|...|++.+.++|..++.++..|+.||.|||++|||||||||+|||+   +..|.|+|+|||+++.. ..+.
T Consensus       104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~~~~~  180 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDLKDGD  180 (357)
T ss_pred             EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcccCCC
Confidence            9999999999999999999999999999999999999999999999999999999   78899999999999843 4445


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ...+.|||+.|||||++.+.+|+..+|+||||+++|+|++|.+||.+.+...+.++|..+....++   ..++.+++++|
T Consensus       181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p---~~ls~~ardll  257 (357)
T KOG0598|consen  181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP---GYLSEEARDLL  257 (357)
T ss_pred             ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC---ccCCHHHHHHH
Confidence            567789999999999999999999999999999999999999999999999999999998754433   34899999999


Q ss_pred             HHhCccCCCCCC----CHHHHHcCCcCCCC
Q 048594          254 RRMLIRDPNNQI----TVAQILKHPWLNYE  279 (483)
Q Consensus       254 ~~~L~~dP~~R~----t~~e~L~h~~~~~~  279 (483)
                      .++|.+||++|.    ++.++.+||||..-
T Consensus       258 ~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i  287 (357)
T KOG0598|consen  258 KKLLKRDPRQRLGGPGDAEEIKRHPFFKGI  287 (357)
T ss_pred             HHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence            999999999996    68899999999843

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.1e-48  Score=384.40  Aligned_cols=222  Identities=34%  Similarity=0.556  Sum_probs=207.9

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~lv~   95 (483)
                      .+|...+.||+|||+.||.+++..+|..||+|++.+.....                                 ..|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            57999999999999999999999999999999998854211                                 119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ce
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~  174 (483)
                      |+|..++|.++++..++++|.+|+.+++||+.||.|||+++|+|||||..|+++   +.+.+|||+|||+|..+... +.
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~Er  174 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDGER  174 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCcccc
Confidence            999999999999999999999999999999999999999999999999999999   78889999999999998743 66


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ..+.||||.|.|||++.....+..+||||+||++|.||.|++||...+-.+++..|....+.+|.    .+|.++++||.
T Consensus       175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~----~ls~~A~dLI~  250 (592)
T KOG0575|consen  175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS----HLSAEAKDLIR  250 (592)
T ss_pred             cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc----ccCHHHHHHHH
Confidence            67899999999999999989999999999999999999999999999999999999999988875    78999999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcCC
Q 048594          255 RMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +||.+||.+|||++++|.|+||.
T Consensus       251 ~lL~~~P~~Rpsl~~vL~h~Ff~  273 (592)
T KOG0575|consen  251 KLLRPNPSERPSLDEVLDHPFFK  273 (592)
T ss_pred             HHhcCCcccCCCHHHHhcCHhhh
Confidence            99999999999999999999995

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=3e-48  Score=366.19  Aligned_cols=223  Identities=28%  Similarity=0.455  Sum_probs=198.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCC-------------------------------CCC-cCeEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS-------------------------------KSD-EGYLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~-------------------------------~~~-~~~lv~E   96 (483)
                      .+.+.+..||+|..|+||+|+|+.|++.+|+|++....                               ... +.+|+||
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE  158 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME  158 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence            46778999999999999999999999999999994321                               111 2489999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      ||+||+|..++...++++|.....++.+|++||.|||. ++|+||||||+|||+   +..|.|||||||.+..+... ..
T Consensus       159 YMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~lvnS-~a  234 (364)
T KOG0581|consen  159 YMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGILVNS-IA  234 (364)
T ss_pred             hcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHHhhhh-hc
Confidence            99999999999999999999999999999999999995 999999999999999   78899999999999988766 56


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCC-----ChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE-----SLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      .+.+||..|||||.+.+..|+.++||||||+.++|+++|+.||...     ...+.+..|..+..+-.+.  ..+|++++
T Consensus       235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~--~~fS~ef~  312 (364)
T KOG0581|consen  235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPE--GEFSPEFR  312 (364)
T ss_pred             ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCc--ccCCHHHH
Confidence            7889999999999999999999999999999999999999999775     5567778887754332221  14899999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +||..||++||.+|||+.|+++|||++
T Consensus       313 ~FV~~CL~Kdp~~R~s~~qLl~Hpfi~  339 (364)
T KOG0581|consen  313 SFVSCCLRKDPSERPSAKQLLQHPFIK  339 (364)
T ss_pred             HHHHHHhcCCcccCCCHHHHhcCHHHh
Confidence            999999999999999999999999998

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-48  Score=352.13  Aligned_cols=222  Identities=33%  Similarity=0.555  Sum_probs=206.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|.+++.||.|+||.|.+++++.+|.-||+|++.+...                                 ....|+||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            579999999999999999999999999999999987641                                 11129999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      ||.+||.|..++.+.+++++..++.++.||+.||+|||+++|++|||||+|||+   +.+|.+||+|||+|..+...  .
T Consensus       124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~r--T  198 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSGR--T  198 (355)
T ss_pred             eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEecCc--E
Confidence            999999999999999999999999999999999999999999999999999999   78999999999999987543  4


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      .+.||||.|+|||++...+|+.++|+|||||++|||+.|.+||.+.+...++++|..+.+.||+    .+++++++||++
T Consensus       199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~----~fs~~~kdLl~~  274 (355)
T KOG0616|consen  199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS----YFSSDAKDLLKK  274 (355)
T ss_pred             EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc----ccCHHHHHHHHH
Confidence            6889999999999999999999999999999999999999999999999999999999999885    789999999999


Q ss_pred             hCccCCCCCC-----CHHHHHcCCcCCCC
Q 048594          256 MLIRDPNNQI-----TVAQILKHPWLNYE  279 (483)
Q Consensus       256 ~L~~dP~~R~-----t~~e~L~h~~~~~~  279 (483)
                      +|+.|-++|.     ...++..||||+.-
T Consensus       275 LL~vD~t~R~gnlknG~~dIk~H~wF~~v  303 (355)
T KOG0616|consen  275 LLQVDLTKRFGNLKNGVEDIKNHPWFKGV  303 (355)
T ss_pred             HHhhhhHhhhcCcCCCccccccCcccccc
Confidence            9999999994     67899999999843

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=8e-48  Score=377.03  Aligned_cols=227  Identities=33%  Similarity=0.569  Sum_probs=207.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~l   93 (483)
                      ..+|.+.+.||.|+|++|++|+++.+++.||||++.+...                                  ...+|+
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF  151 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF  151 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence            4689999999999999999999999999999999987541                                  111299


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |+||+++|+|+++|..-+.|++..++.++.+|+.||+|||++|||||||||+|||+   +.+++++|+|||.|..+.+..
T Consensus       152 vLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~~~  228 (604)
T KOG0592|consen  152 VLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSPSQ  228 (604)
T ss_pred             EEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCChhh
Confidence            99999999999999999999999999999999999999999999999999999999   788999999999998875321


Q ss_pred             ee--------------cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC
Q 048594          174 VY--------------EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS  239 (483)
Q Consensus       174 ~~--------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (483)
                      ..              ...+||..|.+||+|.....++.+|+||||||+|+|+.|.+||.+.++...++.|+.-.+.|+.
T Consensus       229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~  308 (604)
T KOG0592|consen  229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPE  308 (604)
T ss_pred             ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCC
Confidence            11              3478999999999999988899999999999999999999999999999999999999888874


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCCCC
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENG  281 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~~~  281 (483)
                          .+++.+++||.++|..||++|+|++++.+||||..-++
T Consensus       309 ----~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw  346 (604)
T KOG0592|consen  309 ----GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDW  346 (604)
T ss_pred             ----CCCHHHHHHHHHHHccCccccccHHHHhhCcccccCCh
Confidence                77899999999999999999999999999999985443

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-48  Score=352.69  Aligned_cols=231  Identities=35%  Similarity=0.653  Sum_probs=216.4

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC--------------------------------
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------------   91 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------------------------------   91 (483)
                      ...+.+.|...+.||+|..++|.+|+++.||..+|+|++.........                                
T Consensus        12 a~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~   91 (411)
T KOG0599|consen   12 AKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV   91 (411)
T ss_pred             HhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee
Confidence            346677899999999999999999999999999999999765532211                                


Q ss_pred             -------eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           92 -------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        92 -------~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                             ++|+|.|+-|.|.++|.+.-.++|...+.+++|+++|+.|||.++||||||||+|||+   +++.+|+|+|||
T Consensus        92 yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDFG  168 (411)
T KOG0599|consen   92 YESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDFG  168 (411)
T ss_pred             ccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEeccc
Confidence                   8999999999999999999999999999999999999999999999999999999999   788899999999


Q ss_pred             cceeccCCceecccccCCcccCccccC------CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC
Q 048594          165 LAFFFEEGKVYEEVVGTPLYMAPELLG------PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK  238 (483)
Q Consensus       165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  238 (483)
                      ++..+.+++.....||||+|+|||++.      ...|+..+|.||+|||+|.||.|.+||+.....-++..|+.+.+.|.
T Consensus       169 Fa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~  248 (411)
T KOG0599|consen  169 FACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFR  248 (411)
T ss_pred             eeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccC
Confidence            999999999999999999999999984      34688999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          239 SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       239 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ++.|.+++...++||++||+.||.+|+|++|+|.||||.
T Consensus       249 speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  249 SPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             CcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence            999999999999999999999999999999999999995

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=2.9e-47  Score=348.57  Aligned_cols=225  Identities=29%  Similarity=0.514  Sum_probs=197.0

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC--------------------------------eEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------------YLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------------------------------~lv~E   96 (483)
                      +.|+.+.++|+|+||+||+|+++.||+.||||.+..+......                                |+|+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            5688999999999999999999999999999999765432211                                99999


Q ss_pred             ccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCce
Q 048594           97 HCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKV  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~  174 (483)
                      ||+- ++++-|... ..++...+..+++|++.|+.|||+++++||||||+|||+   ..++.+||||||+|+.+. ++..
T Consensus        82 ~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi---t~~gvvKLCDFGFAR~L~~pgd~  157 (396)
T KOG0593|consen   82 YCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI---TQNGVVKLCDFGFARTLSAPGDN  157 (396)
T ss_pred             ecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE---ecCCcEEeccchhhHhhcCCcch
Confidence            9987 666666543 568999999999999999999999999999999999999   678899999999999988 7888


Q ss_pred             ecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-----------------
Q 048594          175 YEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-----------------  236 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----------------  236 (483)
                      +..++.|.||+|||.+.+ ..|++.+||||+||++.||++|.+.|.+.++.+++..|...--.                 
T Consensus       158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~G  237 (396)
T KOG0593|consen  158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHG  237 (396)
T ss_pred             hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceee
Confidence            889999999999999877 68999999999999999999999999999999988887742211                 


Q ss_pred             --CCC--------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          237 --FKS--------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       237 --~~~--------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                        +|.        ..+|.++..+.+|+++||..||.+|++.+|+|.||||.
T Consensus       238 v~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd  288 (396)
T KOG0593|consen  238 VRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD  288 (396)
T ss_pred             eecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence              111        12467888899999999999999999999999999996

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=9.5e-47  Score=369.78  Aligned_cols=232  Identities=32%  Similarity=0.495  Sum_probs=205.2

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~   92 (483)
                      .=.++|.++++||+|+||.||+|+.+.||..||+|++.++..                                 .+..|
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence            345789999999999999999999999999999999998751                                 11129


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-  171 (483)
                      |||||++||++..+|...+.|++..++.++.+++.|++.||+.|++||||||+|+|+   +..|++||+|||++..+.. 
T Consensus       218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl~~~  294 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGLDKK  294 (550)
T ss_pred             EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchhhhh
Confidence            999999999999999999999999999999999999999999999999999999999   8899999999999854321 


Q ss_pred             ---------------------Ccee--------------------------cccccCCcccCccccCCCCCCCcCchHHH
Q 048594          172 ---------------------GKVY--------------------------EEVVGTPLYMAPELLGPCKYGKEIDIWSA  204 (483)
Q Consensus       172 ---------------------~~~~--------------------------~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  204 (483)
                                           ....                          ...+|||.|+|||++.+.+|+..+|+|||
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL  374 (550)
T KOG0605|consen  295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL  374 (550)
T ss_pred             hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence                                 0000                          01379999999999999999999999999


Q ss_pred             HHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCC---HHHHHcCCcCCCCCC
Q 048594          205 GLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT---VAQILKHPWLNYENG  281 (483)
Q Consensus       205 Gvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~e~L~h~~~~~~~~  281 (483)
                      |||+||||.|.+||.+.+..++..+|.+....+..+.-..++++++|||.+||. ||.+|..   ++|+..||||+.-.+
T Consensus       375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W  453 (550)
T KOG0605|consen  375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDW  453 (550)
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCc
Confidence            999999999999999999999999999988666555556788999999999999 9999985   899999999985443

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-46  Score=376.04  Aligned_cols=224  Identities=38%  Similarity=0.621  Sum_probs=209.2

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv   94 (483)
                      -.-|++.+.||.|+.|.|.+|+|..||+..|||++.+....                                 ...|+|
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv   90 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV   90 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence            45699999999999999999999999999999999887311                                 111999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      .||++||.|++++...+++++.+++++++||+.|+.|||..+|+||||||+|+|+   +..+.|||+|||+|..-.++..
T Consensus        91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL---d~~~nIKIADFGMAsLe~~gkl  167 (786)
T KOG0588|consen   91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL---DVKNNIKIADFGMASLEVPGKL  167 (786)
T ss_pred             EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh---hcccCEeeeccceeecccCCcc
Confidence            9999999999999999999999999999999999999999999999999999999   5556699999999988888888


Q ss_pred             ecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ..+.||+|+|.|||++.+.+| +.++||||+|||||-||+|.+||.+.+....+..+.++.+.+|    .++|+++++||
T Consensus       168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP----s~Is~eaQdLL  243 (786)
T KOG0588|consen  168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP----SNISSEAQDLL  243 (786)
T ss_pred             ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC----CcCCHHHHHHH
Confidence            999999999999999999999 6899999999999999999999999999999999999999887    47899999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      .+||..||.+|+|.+|+++|||+..
T Consensus       244 r~ml~VDp~~RiT~~eI~kHP~l~g  268 (786)
T KOG0588|consen  244 RRMLDVDPSTRITTEEILKHPFLSG  268 (786)
T ss_pred             HHHhccCccccccHHHHhhCchhhc
Confidence            9999999999999999999999984

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-46  Score=356.22  Aligned_cols=230  Identities=34%  Similarity=0.595  Sum_probs=206.0

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------CcCeEE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------DEGYLK   94 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------~~~~lv   94 (483)
                      ...+|.+.+.||+|+||+||+|+++.++..||||.+.+....                                +..|+|
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV   87 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV   87 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence            346799999999999999999999999999999999887411                                111999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCC---CcEEEeecccceeccC
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN---ATLKATDFGLAFFFEE  171 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~---~~ikl~Dfg~a~~~~~  171 (483)
                      ||||+||+|.++|...+.++|.+++.++.||+.||++||+++||||||||+|||+.....+   ..+||+|||+|+.+.+
T Consensus        88 MEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~  167 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQP  167 (429)
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCc
Confidence            9999999999999999999999999999999999999999999999999999999764222   6899999999999999


Q ss_pred             CceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          172 GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      +....+.||+|.|||||++....|+.|+|+||+|+|+|++++|.+||...+..+.+..+..+....+..+ ...+....+
T Consensus       168 ~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~-~~~s~~~~~  246 (429)
T KOG0595|consen  168 GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLP-AELSNPLRE  246 (429)
T ss_pred             hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchh-hhccCchhh
Confidence            9888999999999999999888999999999999999999999999999999999887776655444332 345666779


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ++...|..+|..|.+..+-+.|+++.
T Consensus       247 Ll~~ll~~~~~~~~~~~~~~~~~~l~  272 (429)
T KOG0595|consen  247 LLISLLQRNPKDRISFEDFFDHPFLA  272 (429)
T ss_pred             hhhHHHhcCccccCchHHhhhhhhcc
Confidence            99999999999999999999999998

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-45  Score=364.40  Aligned_cols=226  Identities=38%  Similarity=0.653  Sum_probs=205.5

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--C-c--------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--D-E--------------------------------   90 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~-~--------------------------------   90 (483)
                      .....|.+.+.||+|+||+|+.|.+..+|..||+|++.+....  . .                                
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            4456899999999999999999999999999999987764110  0 0                                


Q ss_pred             -CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCC-CcEEEeeccccee
Q 048594           91 -GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN-ATLKATDFGLAFF  168 (483)
Q Consensus        91 -~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~-~~ikl~Dfg~a~~  168 (483)
                       .|+|||||.||+|.+++.+.++++|..++.+++||++|++|||++||+||||||+|||+   +.+ +++||+|||++..
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENill---d~~~~~~Kl~DFG~s~~  170 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILL---DGNEGNLKLSDFGLSAI  170 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEe---cCCCCCEEEeccccccc
Confidence             09999999999999999999999999999999999999999999999999999999999   455 8999999999998


Q ss_pred             c-cCCceecccccCCcccCccccCCCC-C-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCC
Q 048594          169 F-EEGKVYEEVVGTPLYMAPELLGPCK-Y-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       169 ~-~~~~~~~~~~gt~~y~aPE~~~~~~-~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      . .......+.|||+.|+|||++.+.. | +.++||||+||+||.|++|..||...+...+...|..+.+.++.    .+
T Consensus       171 ~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~----~~  246 (370)
T KOG0583|consen  171 SPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPS----YL  246 (370)
T ss_pred             cCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCC----Cc
Confidence            8 5667788999999999999999877 8 58999999999999999999999999988999999998887764    44


Q ss_pred             -CHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          246 -SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       246 -~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                       |+++++||.+||..||.+|+|+.+++.||||+.
T Consensus       247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  247 LSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence             999999999999999999999999999999984

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=9.3e-46  Score=338.10  Aligned_cols=235  Identities=37%  Similarity=0.648  Sum_probs=214.4

Q ss_pred             cccccccceEE-eeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC------------------------------
Q 048594           43 AYEDIKLHFTI-AEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------------------   91 (483)
Q Consensus        43 ~~~~i~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~------------------------------   91 (483)
                      +...|.++|.+ -++||-|-.|.|..|.++.||+.+|+|++..+......                              
T Consensus        55 k~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   55 KEYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             hcccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            33467788888 56799999999999999999999999999765422111                              


Q ss_pred             eEEEeccCCCChHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           92 YLKREHCDGGTLVDRISDRER--YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~--l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      .+|||.++||+|++.|++++.  ++|.++..|++||..|+.|||+.+|.||||||+|+|+.....+..+||+|||+|+.-
T Consensus       135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t  214 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET  214 (400)
T ss_pred             EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccccc
Confidence            789999999999999998865  999999999999999999999999999999999999998888999999999999987


Q ss_pred             cCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC----hHHHHHHHHccccCCCCCCCCCC
Q 048594          170 EEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----LYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      .......+.|-||.|.|||++...+|+..+|+||+||++|-||+|.+||+...    ...+-..|..+.+.|+.+.|..+
T Consensus       215 ~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~V  294 (400)
T KOG0604|consen  215 QEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCV  294 (400)
T ss_pred             CCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHH
Confidence            76667778899999999999999999999999999999999999999998754    45678889999999999999999


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      |..++++|.++|..+|++|+|+.+++.|||++
T Consensus       295 Se~aKdlIR~LLkt~PteRlTI~~~m~hpwi~  326 (400)
T KOG0604|consen  295 SEAAKDLIRKLLKTEPTERLTIEEVMDHPWIN  326 (400)
T ss_pred             HHHHHHHHHHHhcCCchhheeHHHhhcCchhc
Confidence            99999999999999999999999999999998

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-45  Score=354.37  Aligned_cols=229  Identities=31%  Similarity=0.455  Sum_probs=200.4

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------------------CC-cCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------------------SD-EGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------------------~~-~~~   92 (483)
                      .+.++|.+++.||.|+||.||+|+.+.+|..||||.+++.-.                                .+ ..|
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~   86 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY   86 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence            467899999999999999999999999999999999876421                                11 339


Q ss_pred             EEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           93 LKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +|||||+. +|.+.++.+ ..+++..++.|+.||++||+|+|.+|+.|||+||+|||+   ..+..|||+|||+|+.+..
T Consensus        87 fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi---~~~~~iKiaDFGLARev~S  162 (538)
T KOG0661|consen   87 FVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILI---SGNDVIKIADFGLAREVRS  162 (538)
T ss_pred             eeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEe---cccceeEeccccccccccc
Confidence            99999976 899999865 679999999999999999999999999999999999999   4567899999999999998


Q ss_pred             CceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc---------------
Q 048594          172 GKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI---------------  235 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~---------------  235 (483)
                      ...+..++.|.||+|||++.. ..|+.+.|+||+|||++|+.+-++.|.|.++.+++..|..-.-               
T Consensus       163 kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~  242 (538)
T KOG0661|consen  163 KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLAS  242 (538)
T ss_pred             CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHH
Confidence            888999999999999998754 4679999999999999999999999999999888888764211               


Q ss_pred             ----CCCCC-------CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          236 ----DFKSD-------PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       236 ----~~~~~-------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                          .++.-       ..++.++++.++|.+||.+||.+||||.|+|+||||..
T Consensus       243 ~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~  296 (538)
T KOG0661|consen  243 AMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQV  296 (538)
T ss_pred             HhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccc
Confidence                11111       13567899999999999999999999999999999983

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4e-44  Score=360.50  Aligned_cols=225  Identities=28%  Similarity=0.478  Sum_probs=203.9

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------------cCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------------EGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~l   93 (483)
                      .++|.++++||+|+||+|+++..+.+++.||||++++...-.                                  ..|+
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f  446 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF  446 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence            368999999999999999999999999999999999876211                                  1199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CC
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~  172 (483)
                      ||||+.||++ -.+.....+++..++.++..|+.||+|||.+||||||||.+|||+   +..|.+||+|||+++..- .+
T Consensus       447 vmey~~Ggdm-~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m~~g  522 (694)
T KOG0694|consen  447 VMEYVAGGDL-MHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGMGQG  522 (694)
T ss_pred             EEEecCCCcE-EEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccccccccCCCC
Confidence            9999999994 444455789999999999999999999999999999999999999   788999999999998643 55


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ....+.||||.|+|||++.+..|+..+|+|||||++|+||.|+.||.|.++.+..+.|.+..+.+|.    .+|.++.++
T Consensus       523 ~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~----~ls~ea~~i  598 (694)
T KOG0694|consen  523 DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FLSKEAIAI  598 (694)
T ss_pred             CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCC----cccHHHHHH
Confidence            6678899999999999999999999999999999999999999999999999999999998887764    789999999


Q ss_pred             HHHhCccCCCCCCCH-----HHHHcCCcCCCCC
Q 048594          253 IRRMLIRDPNNQITV-----AQILKHPWLNYEN  280 (483)
Q Consensus       253 i~~~L~~dP~~R~t~-----~e~L~h~~~~~~~  280 (483)
                      +.++|.++|++|..+     .++..||||+.-+
T Consensus       599 l~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~  631 (694)
T KOG0694|consen  599 MRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID  631 (694)
T ss_pred             HHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence            999999999999965     7899999998443

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-44  Score=336.39  Aligned_cols=234  Identities=31%  Similarity=0.481  Sum_probs=199.4

Q ss_pred             ccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------
Q 048594           42 KAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------   87 (483)
Q Consensus        42 ~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------   87 (483)
                      .....+..+|..++.||.|+||.|+.+.++.||..||||.+...-.                                  
T Consensus        15 ~~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~   94 (359)
T KOG0660|consen   15 GELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPS   94 (359)
T ss_pred             eeEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccc
Confidence            3455777888889999999999999999999999999999873210                                  


Q ss_pred             ---CCcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           88 ---SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        88 ---~~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                         -...|+|+|+|+. +|...|+.+..+++..+..+++||+.||.|+|+.+|+||||||.|+|+   +.+..+|+||||
T Consensus        95 ~~~f~DvYiV~elMet-DL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~---n~~c~lKI~DFG  170 (359)
T KOG0660|consen   95 RDKFNDVYLVFELMET-DLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL---NADCDLKICDFG  170 (359)
T ss_pred             ccccceeEEehhHHhh-HHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee---ccCCCEEecccc
Confidence               0111999999954 899999988889999999999999999999999999999999999999   788899999999


Q ss_pred             cceeccC---CceecccccCCcccCccccC-CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc-----
Q 048594          165 LAFFFEE---GKVYEEVVGTPLYMAPELLG-PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI-----  235 (483)
Q Consensus       165 ~a~~~~~---~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~-----  235 (483)
                      +|+....   ....++.+.|.||+|||++. ...|+...||||+|||+.||++|++.|.|.+...++..|.....     
T Consensus       171 LAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e  250 (359)
T KOG0660|consen  171 LARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE  250 (359)
T ss_pred             ceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence            9998853   33446778899999999874 45799999999999999999999999999988777777664211     


Q ss_pred             ------------------CCCCC----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          236 ------------------DFKSD----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       236 ------------------~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                                        ..+..    .+|++++.+.+|+.+||..||.+|+|++|+|.|||+...
T Consensus       251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~  316 (359)
T KOG0660|consen  251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPY  316 (359)
T ss_pred             HHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence                              11111    247889999999999999999999999999999999843

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-43  Score=345.79  Aligned_cols=226  Identities=29%  Similarity=0.549  Sum_probs=198.9

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKR   95 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~   95 (483)
                      +=...|.....||+|+.|.||.+....+++.||||.+......                              ++.++||
T Consensus       270 dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM  349 (550)
T KOG0578|consen  270 DPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM  349 (550)
T ss_pred             ChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence            3456899999999999999999999999999999999776422                              2239999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-e
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-V  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~  174 (483)
                      ||++||+|.+.+... .++|.+++.|++.++.||.|||.+||+|||||.+|||+   +..+.+||+|||++..+.... .
T Consensus       350 Eym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL---~~~g~vKltDFGFcaqi~~~~~K  425 (550)
T KOG0578|consen  350 EYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL---TMDGSVKLTDFGFCAQISEEQSK  425 (550)
T ss_pred             eecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe---ccCCcEEEeeeeeeeccccccCc
Confidence            999999999988765 69999999999999999999999999999999999999   677789999999998876544 4


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcc-ccCCCCCCCCCCCHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR-EIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~li  253 (483)
                      ..+.+|||.|||||+.....|++++||||||++++||+-|++||...+...-+..|... .+.+  ..+..+|+.+++|+
T Consensus       426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~l--k~~~klS~~~kdFL  503 (550)
T KOG0578|consen  426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKL--KNPEKLSPELKDFL  503 (550)
T ss_pred             cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCc--CCccccCHHHHHHH
Confidence            45678999999999999999999999999999999999999999987776666666543 3333  23468999999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcCC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+||+.||.+|++|.|+|+||||+
T Consensus       504 ~~cL~~dv~~RasA~eLL~HpFl~  527 (550)
T KOG0578|consen  504 DRCLVVDVEQRASAKELLEHPFLK  527 (550)
T ss_pred             HHHhhcchhcCCCHHHHhcChhhh
Confidence            999999999999999999999996

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-43  Score=341.56  Aligned_cols=230  Identities=33%  Similarity=0.611  Sum_probs=200.2

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC---------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG---------------------------------   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~---------------------------------   91 (483)
                      ...-++|++.+.||+|.||.|.+|++..+++.||||++.+.......                                 
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            34567899999999999999999999999999999999876422111                                 


Q ss_pred             -------------eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           92 -------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        92 -------------~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                                   |||+|||..|.+...-.....+++.+++.+++.++.||+|||.+||+||||||+|+|+   +..+.|
T Consensus       173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl---~~~g~V  249 (576)
T KOG0585|consen  173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL---SSDGTV  249 (576)
T ss_pred             EEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE---cCCCcE
Confidence                         9999999999886654444349999999999999999999999999999999999999   677999


Q ss_pred             EEeecccceeccCC------ceecccccCCcccCccccCCCC---C-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHH
Q 048594          159 KATDFGLAFFFEEG------KVYEEVVGTPLYMAPELLGPCK---Y-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLT  228 (483)
Q Consensus       159 kl~Dfg~a~~~~~~------~~~~~~~gt~~y~aPE~~~~~~---~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~  228 (483)
                      ||+|||++.....+      .......|||.|+|||.+.+..   + +.+.||||+||+||.|+.|+.||.+....++.+
T Consensus       250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~  329 (576)
T KOG0585|consen  250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFD  329 (576)
T ss_pred             EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHH
Confidence            99999999876322      2233468999999999987632   3 578999999999999999999999999999999


Q ss_pred             HHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          229 AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       229 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                      .|.+..+.++..  +.+.+.++++|.+||.+||.+|++..++..|||....
T Consensus       330 KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  330 KIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             HHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            999999988764  4788999999999999999999999999999999843

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=8.2e-43  Score=314.31  Aligned_cols=226  Identities=33%  Similarity=0.467  Sum_probs=196.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC--------------------------------eEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------------YLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------------------------------~lv~E   96 (483)
                      .+|..+++||+|.||+||+|++.+||+.||||.+......+..                                .||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            4789999999999999999999999999999999887654433                                89999


Q ss_pred             ccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-e
Q 048594           97 HCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-V  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~  174 (483)
                      |++. +|...|+.. ..++...+..++.++++||+|||++.|+||||||.|+|+   +.++.+||+|||+|+.+.+.. .
T Consensus        82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi---s~~g~lKiADFGLAr~f~~p~~~  157 (318)
T KOG0659|consen   82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI---SSDGQLKIADFGLARFFGSPNRI  157 (318)
T ss_pred             eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE---cCCCcEEeecccchhccCCCCcc
Confidence            9987 899988765 579999999999999999999999999999999999999   788899999999999876433 3


Q ss_pred             ecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCC------------
Q 048594          175 YEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP------------  241 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~------------  241 (483)
                      ....+-|.||+|||.+.| ..|+..+|+||.|||+.||+.|.+-|.|.++.+++..|.+.--......            
T Consensus       158 ~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~  237 (318)
T KOG0659|consen  158 QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVK  237 (318)
T ss_pred             cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHH
Confidence            333478999999998865 4689999999999999999999999999999999888876432222222            


Q ss_pred             ------------CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          242 ------------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       242 ------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                  ++..+.++.+|+.+||..||.+|+|+.|+|+|+||+.
T Consensus       238 ~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~  286 (318)
T KOG0659|consen  238 IQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS  286 (318)
T ss_pred             HhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence                        3456788899999999999999999999999999983

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.2e-43  Score=348.08  Aligned_cols=222  Identities=32%  Similarity=0.546  Sum_probs=204.3

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC--------------------------------eEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------------YLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------------------------------~lv~E   96 (483)
                      ++|.+.+.||+|+||+||+|+.|.|.+.||+|.+.+....+..                                ++|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            5799999999999999999999999999999999887644421                                99999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-e
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-Y  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-~  175 (483)
                      ||.| +|..+|...+.++|+.++.++.+++.||.|||+++|+|||+||.|||+   +..+.+|+||||+|+....+.. .
T Consensus        82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t~vl  157 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNTSVL  157 (808)
T ss_pred             hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCceee
Confidence            9988 999999999999999999999999999999999999999999999999   7889999999999998765543 3


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....|||.|||||++.+..|+..+|.||||||+||+++|++||......+..+.|......++    ++++..+.+|+..
T Consensus       158 tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p----~~~S~~f~nfl~g  233 (808)
T KOG0597|consen  158 TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP----STASSSFVNFLQG  233 (808)
T ss_pred             eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc----ccccHHHHHHHHH
Confidence            456799999999999999999999999999999999999999999998999999988776655    4789999999999


Q ss_pred             hCccCCCCCCCHHHHHcCCcCCC
Q 048594          256 MLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      +|.+||.+|+|+.+++.|||.+.
T Consensus       234 LL~kdP~~RltW~~Ll~HpF~k~  256 (808)
T KOG0597|consen  234 LLIKDPAQRLTWTDLLGHPFWKG  256 (808)
T ss_pred             HhhcChhhcccHHHHhcChHHhh
Confidence            99999999999999999999873

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-44  Score=344.62  Aligned_cols=244  Identities=28%  Similarity=0.420  Sum_probs=203.4

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC-------------------------------eEEEe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG-------------------------------YLKRE   96 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-------------------------------~lv~E   96 (483)
                      ...|+.++.||+|+||.||+|.+..|++.||+|++......++.                               +++||
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe   91 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME   91 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence            34688889999999999999999999999999999887655532                               78999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-e
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-Y  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-~  175 (483)
                      ||.||++.+.+.....+.|..+..++++++.||.|||.++.+|||||+.|||+   ...+.+||+|||++..+..... .
T Consensus        92 y~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~---s~~g~vkl~DfgVa~ql~~~~~rr  168 (467)
T KOG0201|consen   92 YCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILL---SESGDVKLADFGVAGQLTNTVKRR  168 (467)
T ss_pred             HhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeE---eccCcEEEEecceeeeeechhhcc
Confidence            99999999999988888999999999999999999999999999999999999   5568999999999998865432 3


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      .+.+|||.|||||++.+..|+.++||||||++.+||++|.+|+........+..|-+..++..   -..+++.+++||..
T Consensus       169 ~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L---~~~~S~~~kEFV~~  245 (467)
T KOG0201|consen  169 KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRL---DGDFSPPFKEFVEA  245 (467)
T ss_pred             ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCcc---ccccCHHHHHHHHH
Confidence            678999999999999988999999999999999999999999987766443333333222111   12578999999999


Q ss_pred             hCccCCCCCCCHHHHHcCCcCCCCCCCCCCCCCCHHHHHHHHHHhh
Q 048594          256 MLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRA  301 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (483)
                      ||++||+.||||.++|+|+|++.    +...+.....+.+.++++.
T Consensus       246 CL~k~P~~RpsA~~LLKh~FIk~----a~k~s~L~~~i~r~~~~~~  287 (467)
T KOG0201|consen  246 CLDKNPEFRPSAKELLKHKFIKR----AKKTSELKELIDRYKRWRV  287 (467)
T ss_pred             HhhcCcccCcCHHHHhhhHHHHh----cCCchHHHHHHHHHHHHhh
Confidence            99999999999999999999982    2233333444555555443

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1e-42  Score=331.49  Aligned_cols=229  Identities=34%  Similarity=0.561  Sum_probs=202.9

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~lv~   95 (483)
                      ++|++++.||+|..|+||+|..+.++..+|+|++.+.....                                 ..|+||
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            57889999999999999999999999999999998764221                                 119999


Q ss_pred             eccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC--
Q 048594           96 EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE--  171 (483)
Q Consensus        96 E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~--  171 (483)
                      |||+||+|...++.+  +.+++..++.++..++.||+|||..|||+|||||+|||+   .++|+|-|+||.++.....  
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~~~~P  233 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRCPVSP  233 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccCCCCC
Confidence            999999999998766  579999999999999999999999999999999999999   6788999999998643310  


Q ss_pred             -------------------------------C-c-----------------------eecccccCCcccCccccCCCCCC
Q 048594          172 -------------------------------G-K-----------------------VYEEVVGTPLYMAPELLGPCKYG  196 (483)
Q Consensus       172 -------------------------------~-~-----------------------~~~~~~gt~~y~aPE~~~~~~~~  196 (483)
                                                     . +                       .....+||-.|.|||++.+...+
T Consensus       234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg  313 (459)
T KOG0610|consen  234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG  313 (459)
T ss_pred             eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence                                           0 0                       00124689999999999999999


Q ss_pred             CcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCC----HHHHHc
Q 048594          197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT----VAQILK  272 (483)
Q Consensus       197 ~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~L~  272 (483)
                      .++|+|+|||++||||.|..||.|.+..+++.+|....+.|+..+  .++..++|||.++|.+||++|+.    |+|+.+
T Consensus       314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             chhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence            999999999999999999999999999999999999999988764  78899999999999999999998    999999


Q ss_pred             CCcCCCCCCC
Q 048594          273 HPWLNYENGE  282 (483)
Q Consensus       273 h~~~~~~~~~  282 (483)
                      ||||+.-++.
T Consensus       392 HpFF~gVnWa  401 (459)
T KOG0610|consen  392 HPFFEGVNWA  401 (459)
T ss_pred             CccccCCChh
Confidence            9999965554

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.7e-44  Score=322.74  Aligned_cols=215  Identities=29%  Similarity=0.480  Sum_probs=189.4

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------c-CeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------E-GYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~-~~l   93 (483)
                      ..+|.+++.||+|+||+||++.+..+|..+|.|-+.-.....                                 + .+|
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni   97 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI   97 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence            457999999999999999999999999999999987432111                                 1 299


Q ss_pred             EEeccCCCChHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           94 KREHCDGGTLVDRIS----DRERYTERAAASVFRSVVNALHACHS--NG--IMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        94 v~E~~~g~~L~~~l~----~~~~l~~~~~~~i~~qil~~l~~LH~--~~--ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                      |||||.+|+|...|+    +...++|..++.++.|++.||.+||+  .+  |+||||||.||++   +.+|.|||+|||+
T Consensus        98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl---~~~gvvKLGDfGL  174 (375)
T KOG0591|consen   98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL---TANGVVKLGDFGL  174 (375)
T ss_pred             HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE---cCCCceeeccchh
Confidence            999999999999886    34679999999999999999999999  45  8999999999999   6888999999999


Q ss_pred             ceeccCCce-ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCC
Q 048594          166 AFFFEEGKV-YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       166 a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  244 (483)
                      ++.+..... ....+|||.||+||.+.+.+|+.++||||+||++|||+.-++||.+.+......+|.++.++  +-+-..
T Consensus       175 ~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~--~~p~~~  252 (375)
T KOG0591|consen  175 GRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYP--PLPDEH  252 (375)
T ss_pred             HhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCC--CCcHHH
Confidence            999875543 35679999999999999999999999999999999999999999999999999999988553  212246


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCH
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITV  267 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~  267 (483)
                      +|..+..+|..|+..||..||+.
T Consensus       253 YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  253 YSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             hhhHHHHHHHHHccCCcccCCCc
Confidence            88999999999999999999986

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.1e-42  Score=322.60  Aligned_cols=226  Identities=27%  Similarity=0.423  Sum_probs=196.5

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC----------------------------------eE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG----------------------------------YL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------~l   93 (483)
                      .+.|..+..|++|+||+||+|+++.|++.||+|.++.....+..                                  |+
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence            45789999999999999999999999999999999877644333                                  99


Q ss_pred             EEeccCCCChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |||||+. +|...+..-+ +++..++..++.|++.|++|||.+.|+||||||+|+|+   ...|.+||+|||+|+.+...
T Consensus       155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm---~~~G~lKiaDFGLAR~ygsp  230 (419)
T KOG0663|consen  155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL---SHKGILKIADFGLAREYGSP  230 (419)
T ss_pred             eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee---ccCCcEEecccchhhhhcCC
Confidence            9999987 8999998765 89999999999999999999999999999999999999   67889999999999988654


Q ss_pred             -ceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc---------------
Q 048594          173 -KVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI---------------  235 (483)
Q Consensus       173 -~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~---------------  235 (483)
                       ..+...+.|.||+|||++.+. .|+...|+||+|||+.||+++.+.|.|....+++..|.+---               
T Consensus       231 ~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~  310 (419)
T KOG0663|consen  231 LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPA  310 (419)
T ss_pred             cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccch
Confidence             445667889999999998764 589999999999999999999999999999999988875221               


Q ss_pred             ----CCCCCC-------CC--CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          236 ----DFKSDP-------WP--TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       236 ----~~~~~~-------~~--~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                          .++..+       ++  .++....+|+..+|..||.+|.||.|+|+|.||.
T Consensus       311 ~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~  365 (419)
T KOG0663|consen  311 VKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFR  365 (419)
T ss_pred             hhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccc
Confidence                111111       11  2458899999999999999999999999999998

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.7e-43  Score=331.59  Aligned_cols=226  Identities=37%  Similarity=0.650  Sum_probs=211.9

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC---------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG---------------------------------   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~---------------------------------   91 (483)
                      -++.-+|.+.+.||.|.||.|.+|.....|+.||||.|.+....++.                                 
T Consensus        49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKI  128 (668)
T KOG0611|consen   49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKI  128 (668)
T ss_pred             cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceE
Confidence            46677999999999999999999999999999999999988755443                                 


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      .|||||..+|+|.+|+.+++.++|.+++.+++||++|+.|||+++++|||||.+|||+   +.++++||+|||++..+..
T Consensus       129 vivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSNly~~  205 (668)
T KOG0611|consen  129 VIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSNLYAD  205 (668)
T ss_pred             EEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhhhhcc
Confidence            8999999999999999999999999999999999999999999999999999999999   7889999999999999888


Q ss_pred             CceecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          172 GKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      .+...++||+|.|.+||++.+.+| ++.+|.|||||+||.|..|.+||.|.+...+...|.++.+.-+.     -|..+.
T Consensus       206 ~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~-----~PSdA~  280 (668)
T KOG0611|consen  206 KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE-----TPSDAS  280 (668)
T ss_pred             ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC-----CCchHH
Confidence            888999999999999999999999 79999999999999999999999999999999999999886543     457899


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      -||.+||..+|.+|.|+.++-.|=|++.
T Consensus       281 gLIRwmLmVNP~RRATieDiAsHWWvNw  308 (668)
T KOG0611|consen  281 GLIRWMLMVNPERRATIEDIASHWWVNW  308 (668)
T ss_pred             HHHHHHHhcCcccchhHHHHhhhheeec
Confidence            9999999999999999999999999984

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.3e-42  Score=336.21  Aligned_cols=226  Identities=30%  Similarity=0.478  Sum_probs=198.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC----------------------------------eE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG----------------------------------YL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------~l   93 (483)
                      .+.|..++.||+|+||.||+|++..||+.||+|.+......++.                                  |+
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl  195 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL  195 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence            45688899999999999999999999999999999887644433                                  99


Q ss_pred             EEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |+|||+. +|.-++... -.|++.++..+++||+.||.|||++||+|||||..|||+   +++|.+||+|||+|+.+...
T Consensus       196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~y~~~  271 (560)
T KOG0600|consen  196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARFYTPS  271 (560)
T ss_pred             EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccceeeccCC
Confidence            9999987 898888764 479999999999999999999999999999999999999   78899999999999977644


Q ss_pred             c--eecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCC-------
Q 048594          173 K--VYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW-------  242 (483)
Q Consensus       173 ~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-------  242 (483)
                      .  .+...+.|.||+|||++.+ ..|+.++|+||+|||+.||++|++.|.|.++.++++.|.+-.-......|       
T Consensus       272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~  351 (560)
T KOG0600|consen  272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPH  351 (560)
T ss_pred             CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCc
Confidence            3  4566788999999998876 46899999999999999999999999999999999998764332222222       


Q ss_pred             ------------------CCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          243 ------------------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       243 ------------------~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                        ..+++.+.+|+..||..||.+|.||.++|+|+||.
T Consensus       352 ~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~  404 (560)
T KOG0600|consen  352 ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT  404 (560)
T ss_pred             ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence                              24678899999999999999999999999999996

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-41  Score=331.31  Aligned_cols=220  Identities=27%  Similarity=0.515  Sum_probs=194.9

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~   95 (483)
                      ++|.+.+.||+|+||.||+|.++.+|+.+|+|++......                                 ...|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            4699999999999999999999999999999998653210                                 1118999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      ||+.|++|.+++...+.+++..+..++.||+.||+|||++|++||||||+|||+   +.++.+||+|||++.......  
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli---~~~~~~kl~Dfg~~~~~~~~~--  155 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL---DKEGHIKLTDFGFAKKLRDRT--  155 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEEecCcchhccCCc--
Confidence            999999999999988899999999999999999999999999999999999999   567889999999998764322  


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ...+|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+......++.    .+++.++++|.+
T Consensus       156 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~li~~  231 (291)
T cd05612         156 WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HLDLYAKDLIKK  231 (291)
T ss_pred             ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc----cCCHHHHHHHHH
Confidence            3457899999999998888899999999999999999999999998888888888877665543    568999999999


Q ss_pred             hCccCCCCCCC-----HHHHHcCCcCC
Q 048594          256 MLIRDPNNQIT-----VAQILKHPWLN  277 (483)
Q Consensus       256 ~L~~dP~~R~t-----~~e~L~h~~~~  277 (483)
                      ||+.||.+||+     ++++++||||.
T Consensus       232 ~l~~dp~~R~~~~~~~~~~~l~h~~~~  258 (291)
T cd05612         232 LLVVDRTRRLGNMKNGADDVKNHRWFK  258 (291)
T ss_pred             HcCCCHHHccCCccCCHHHHhcCcccc
Confidence            99999999995     99999999997

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2.5e-41  Score=340.60  Aligned_cols=226  Identities=30%  Similarity=0.472  Sum_probs=191.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|++++.||+|+||+||+|.++.+++.||+|++.+...                                 ....|+||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            479999999999999999999999999999999975321                                 01119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--  173 (483)
                      |||+||+|.+++...+++++..+..++.||+.||+|||++||+||||||+|||+   +.++.+||+|||++..+....  
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi---~~~~~vkL~DFGla~~~~~~~~~  157 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL---DSKGHVKLSDFGLCTGLKKAHRT  157 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCCEEEeeccCcccccccccc
Confidence            999999999999988899999999999999999999999999999999999999   567899999999987543210  


Q ss_pred             ----------------------------------eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCC
Q 048594          174 ----------------------------------VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFW  219 (483)
Q Consensus       174 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~  219 (483)
                                                        .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~  237 (363)
T cd05628         158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (363)
T ss_pred             cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence                                              0123479999999999988889999999999999999999999999


Q ss_pred             CCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCC---CCCCHHHHHcCCcCCC
Q 048594          220 AESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN---NQITVAQILKHPWLNY  278 (483)
Q Consensus       220 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~---~R~t~~e~L~h~~~~~  278 (483)
                      +.........+.........++...++++++++|.+|+. +|.   .||+++|+++||||+.
T Consensus       238 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~  298 (363)
T cd05628         238 SETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEG  298 (363)
T ss_pred             CCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCC
Confidence            888888888887644333333334578999999999775 444   4689999999999983

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-42  Score=328.20  Aligned_cols=226  Identities=32%  Similarity=0.496  Sum_probs=188.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCC------------------------------CCC--cCeEEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS------------------------------KSD--EGYLKR   95 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~------------------------------~~~--~~~lv~   95 (483)
                      ...|...+.||+|+||+||++.+..+|...|||.+...+                              ...  ..++.|
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            346888999999999999999999999999999987752                              011  248999


Q ss_pred             eccCCCChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCC-CCcEEEeecccceeccC--
Q 048594           96 EHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE-NATLKATDFGLAFFFEE--  171 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~-~~~ikl~Dfg~a~~~~~--  171 (483)
                      ||++||+|.+++...+ +++|..++.+.+||++||.|||++||+||||||+|||+   +. ++.+||+|||.+.....  
T Consensus        96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl---~~~~~~~KlaDFG~a~~~~~~~  172 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILL---DPSNGDVKLADFGLAKKLESKG  172 (313)
T ss_pred             eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEE---eCCCCeEEeccCcccccccccc
Confidence            9999999999999876 79999999999999999999999999999999999999   45 68999999999987653  


Q ss_pred             --CceecccccCCcccCccccCCCC-CCCcCchHHHHHHHHHHhhCCCCCCC-CChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          172 --GKVYEEVVGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWA-ESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       172 --~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                        ........||+.|||||++..+. ..+++||||+||++.||+||.+||.. ......+-.+.... ..| .....+|.
T Consensus       173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~~P-~ip~~ls~  250 (313)
T KOG0198|consen  173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-SLP-EIPDSLSD  250 (313)
T ss_pred             ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-CCC-CCCcccCH
Confidence              12233568999999999998632 34599999999999999999999976 23333333333333 111 33356999


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      ++++||.+||.++|.+||||.++|.|||...
T Consensus       251 ~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~  281 (313)
T KOG0198|consen  251 EAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ  281 (313)
T ss_pred             HHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence            9999999999999999999999999999983

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=3.9e-41  Score=327.82  Aligned_cols=225  Identities=28%  Similarity=0.448  Sum_probs=187.6

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEEec
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKREH   97 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~E~   97 (483)
                      |++.+.||+|+||.||+|.++.+|+.||+|.+.+....                                 +..|+|+||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            78899999999999999999999999999998653211                                 011899999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      |.+++|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.++|+|||++.........
T Consensus        82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~  158 (285)
T cd05631          82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGETV  158 (285)
T ss_pred             cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeCCCcEEcCCCCee
Confidence            9999999888643  468999999999999999999999999999999999999   56778999999999876555444


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....||+.|+|||++.+..++.++||||+||++|+|++|..||.+.........+..............+++++.+||.+
T Consensus       159 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~  238 (285)
T cd05631         159 RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRM  238 (285)
T ss_pred             cCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHH
Confidence            56689999999999998889999999999999999999999998765433333322222111222234688999999999


Q ss_pred             hCccCCCCCCC-----HHHHHcCCcCCC
Q 048594          256 MLIRDPNNQIT-----VAQILKHPWLNY  278 (483)
Q Consensus       256 ~L~~dP~~R~t-----~~e~L~h~~~~~  278 (483)
                      ||+.||.+|||     ++++++||||..
T Consensus       239 ~l~~~P~~R~~~~~~~~~~~~~h~~~~~  266 (285)
T cd05631         239 LLTKNPKERLGCRGNGAAGVKQHPIFKN  266 (285)
T ss_pred             HhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence            99999999997     899999999983

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=3.5e-41  Score=334.96  Aligned_cols=222  Identities=29%  Similarity=0.547  Sum_probs=196.4

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv   94 (483)
                      .++|.+.+.||+|+||.||+|.++.+|+.||+|++.+...                                 .+..|+|
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   96 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL   96 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence            3679999999999999999999999999999999865321                                 0111999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      ||||.|++|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||+   +.++.+||+|||++....... 
T Consensus        97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~-  172 (329)
T PTZ00263         97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPDRT-  172 (329)
T ss_pred             EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---CCCCCEEEeeccCceEcCCCc-
Confidence            9999999999999988899999999999999999999999999999999999999   677899999999998764332 


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                       ...+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.........+..+...++    ..++..+++||.
T Consensus       173 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~  247 (329)
T PTZ00263        173 -FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFP----NWFDGRARDLVK  247 (329)
T ss_pred             -ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCC----CCCCHHHHHHHH
Confidence             345799999999999988899999999999999999999999998888888888877765543    247899999999


Q ss_pred             HhCccCCCCCCC-----HHHHHcCCcCCC
Q 048594          255 RMLIRDPNNQIT-----VAQILKHPWLNY  278 (483)
Q Consensus       255 ~~L~~dP~~R~t-----~~e~L~h~~~~~  278 (483)
                      +||+.||.+||+     +++++.||||..
T Consensus       248 ~~L~~dP~~R~~~~~~~~~~ll~hp~f~~  276 (329)
T PTZ00263        248 GLLQTDHTKRLGTLKGGVADVKNHPYFHG  276 (329)
T ss_pred             HHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence            999999999997     799999999983

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=2.4e-41  Score=335.29  Aligned_cols=217  Identities=31%  Similarity=0.537  Sum_probs=190.1

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEEeccCCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKREHCDGG  101 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~E~~~g~  101 (483)
                      +.||+|+||.||+|.++.+|+.||+|++.+....                                 ...|+|||||.|+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999999999999999998753210                                 1119999999999


Q ss_pred             ChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCceeccccc
Q 048594          102 TLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVG  180 (483)
Q Consensus       102 ~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~g  180 (483)
                      +|.+++...+.+++..+..++.||+.||+|||++||+||||||+||++   +.++.+||+|||++.... ........+|
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DfG~a~~~~~~~~~~~~~~g  157 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCG  157 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEeeCCCCcccccCCCcccceec
Confidence            999999988899999999999999999999999999999999999999   667889999999987532 2233345679


Q ss_pred             CCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccC
Q 048594          181 TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD  260 (483)
Q Consensus       181 t~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  260 (483)
                      |+.|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+......++    ..+++++.+||.+||++|
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~d  233 (323)
T cd05571         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPEAKSLLAGLLKKD  233 (323)
T ss_pred             CccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccCC
Confidence            9999999999988899999999999999999999999998887777777776665544    367899999999999999


Q ss_pred             CCCCC-----CHHHHHcCCcCCC
Q 048594          261 PNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       261 P~~R~-----t~~e~L~h~~~~~  278 (483)
                      |.+||     ++.++++||||..
T Consensus       234 P~~R~~~~~~~~~~ll~h~~f~~  256 (323)
T cd05571         234 PKQRLGGGPEDAKEIMEHRFFAS  256 (323)
T ss_pred             HHHcCCCCCCCHHHHHcCCCcCC
Confidence            99999     8999999999973

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=5.7e-41  Score=332.79  Aligned_cols=222  Identities=28%  Similarity=0.499  Sum_probs=194.4

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeEEE
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYLKR   95 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~lv~   95 (483)
                      +|.+++.||+|+||.||+|.++.+++.||+|++.+...                                  .+..|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            48999999999999999999999999999999875321                                  00118999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCce
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~  174 (483)
                      |||+|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... ....
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~  157 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DAEGHIKIADFGMCKENIFGGKT  157 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---cCCCCEEEeecCcceecCCCCCc
Confidence            999999999999888899999999999999999999999999999999999999   567889999999987532 2223


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....+||+.|+|||++.+..++.++|+||+||++|+|++|+.||.+.........+......++    ..+++++.++|.
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~  233 (324)
T cd05587         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSICK  233 (324)
T ss_pred             eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence            3456799999999999988899999999999999999999999999888888888877655443    357899999999


Q ss_pred             HhCccCCCCCCCH-----HHHHcCCcCCC
Q 048594          255 RMLIRDPNNQITV-----AQILKHPWLNY  278 (483)
Q Consensus       255 ~~L~~dP~~R~t~-----~e~L~h~~~~~  278 (483)
                      +||.+||.+|+++     +++++||||..
T Consensus       234 ~~l~~~P~~R~~~~~~~~~~~~~hp~~~~  262 (324)
T cd05587         234 GLLTKHPAKRLGCGPTGERDIREHAFFRR  262 (324)
T ss_pred             HHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence            9999999999986     89999999983

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-41  Score=333.77  Aligned_cols=224  Identities=30%  Similarity=0.471  Sum_probs=194.4

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|.+.+.||+|+||.||+|.++.+|+.||+|++.+...                                 ....|+||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            369999999999999999999999999999999875321                                 01119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      |||+|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++   +..+.+||+|||++.....  ..
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kL~Dfg~a~~~~~--~~  155 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI---DASGHIKLTDFGLSKGIVT--YA  155 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEEEeCcCCccccc--cc
Confidence            999999999999988899999999999999999999999999999999999999   6678999999999976543  23


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCC----CCCCHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW----PTISSSAKD  251 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~  251 (483)
                      ....||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+....+......+..+.+    ..++.++.+
T Consensus       156 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~  235 (333)
T cd05600         156 NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWD  235 (333)
T ss_pred             CCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHH
Confidence            4567999999999999888999999999999999999999999988877777776654332222222    256899999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||.+||..+|.+|||+.++++||||.
T Consensus       236 li~~~l~~~~~rr~s~~~ll~h~~~~  261 (333)
T cd05600         236 LITKLINDPSRRFGSLEDIKNHPFFK  261 (333)
T ss_pred             HHHHHhhChhhhcCCHHHHHhCcccC
Confidence            99999999999999999999999998

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=3.8e-41  Score=338.89  Aligned_cols=231  Identities=29%  Similarity=0.433  Sum_probs=194.7

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------CC--------------
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------SD--------------   89 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------~~--------------   89 (483)
                      .+.+..+|.++++||+|+||.|.+|.+.+|++.||||+++....                    .+              
T Consensus       181 ~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr  260 (586)
T KOG0667|consen  181 NDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR  260 (586)
T ss_pred             cceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence            46777799999999999999999999999999999999976531                    00              


Q ss_pred             -cCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           90 -EGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        90 -~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                       ..|||+|.+.- +|.++|+.+  ..++...++.++.||+.||.+||..+|||+||||+|||+...+ ...|||+|||.|
T Consensus       261 ~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~-r~~vKVIDFGSS  338 (586)
T KOG0667|consen  261 NHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK-RSRIKVIDFGSS  338 (586)
T ss_pred             cceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC-cCceeEEecccc
Confidence             11999999965 899999977  4689999999999999999999999999999999999998654 348999999999


Q ss_pred             eeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc-----------
Q 048594          167 FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI-----------  235 (483)
Q Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~-----------  235 (483)
                      ...... .+ +++.+..|+|||++.+.+|+.+.|+||||||++||++|.+.|.|.++.+++..|+.-.-           
T Consensus       339 c~~~q~-vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~  416 (586)
T KOG0667|consen  339 CFESQR-VY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAK  416 (586)
T ss_pred             cccCCc-ce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence            875433 23 77889999999999999999999999999999999999999999999988888763110           


Q ss_pred             ----CCCC-C-------------------------------CCC------------CCCHHHHHHHHHhCccCCCCCCCH
Q 048594          236 ----DFKS-D-------------------------------PWP------------TISSSAKDLIRRMLIRDPNNQITV  267 (483)
Q Consensus       236 ----~~~~-~-------------------------------~~~------------~~~~~~~~li~~~L~~dP~~R~t~  267 (483)
                          .+.. .                               ..|            .-...+.+||.+||.+||.+|+|+
T Consensus       417 ~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp  496 (586)
T KOG0667|consen  417 KAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITP  496 (586)
T ss_pred             ccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCH
Confidence                0000 0                               001            112457899999999999999999


Q ss_pred             HHHHcCCcCCC
Q 048594          268 AQILKHPWLNY  278 (483)
Q Consensus       268 ~e~L~h~~~~~  278 (483)
                      .++|+||||..
T Consensus       497 ~qal~Hpfl~~  507 (586)
T KOG0667|consen  497 AQALNHPFLTG  507 (586)
T ss_pred             HHHhcCccccc
Confidence            99999999983

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.6e-41  Score=336.34  Aligned_cols=225  Identities=34%  Similarity=0.612  Sum_probs=195.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~   95 (483)
                      ++|.+.+.||+|+||+||+|.++.+|+.||||++.+....                                 ...|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            4799999999999999999999999999999998754211                                 1119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--  173 (483)
                      |||.|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.......  
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~  157 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI---DADGHIKLADFGLCKKMNKAKDR  157 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEeecCCCCccCcccCcc
Confidence            999999999999988899999999999999999999999999999999999999   677899999999987654332  


Q ss_pred             ----------------------------eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHH
Q 048594          174 ----------------------------VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG  225 (483)
Q Consensus       174 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~  225 (483)
                                                  ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~  237 (350)
T cd05573         158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE  237 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH
Confidence                                        2234578999999999998889999999999999999999999999988877


Q ss_pred             HHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCC-HHHHHcCCcCC
Q 048594          226 TLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT-VAQILKHPWLN  277 (483)
Q Consensus       226 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-~~e~L~h~~~~  277 (483)
                      ....+.........+..+.+++++.+||.+||. +|.+||+ +.++++||||.
T Consensus       238 ~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~  289 (350)
T cd05573         238 TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFK  289 (350)
T ss_pred             HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcC
Confidence            777777733333333334579999999999997 9999999 99999999997

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-41  Score=337.88  Aligned_cols=226  Identities=29%  Similarity=0.512  Sum_probs=193.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|++++.||+|+||+||+|.++.+|+.||||++.+...                                 ....|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            479999999999999999999999999999999975321                                 01119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--  173 (483)
                      |||.||+|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||+   +.++.++|+|||++..+....  
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~  157 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSHRT  157 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceeccccccc
Confidence            999999999999988899999999999999999999999999999999999999   677899999999987543211  


Q ss_pred             -------------------------------------eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCC
Q 048594          174 -------------------------------------VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQ  216 (483)
Q Consensus       174 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~  216 (483)
                                                           .....+||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~  237 (364)
T cd05599         158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP  237 (364)
T ss_pred             cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence                                                 0012468999999999988889999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCC---HHHHHcCCcCCC
Q 048594          217 PFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT---VAQILKHPWLNY  278 (483)
Q Consensus       217 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~e~L~h~~~~~  278 (483)
                      ||.+.+.......+......+..+....+++++++||.+||. +|.+|++   +.+++.||||+.
T Consensus       238 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~  301 (364)
T cd05599         238 PFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKG  301 (364)
T ss_pred             CCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCC
Confidence            999888877777777654443333334678999999999996 9999998   999999999983

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=2.5e-40  Score=322.15  Aligned_cols=225  Identities=31%  Similarity=0.443  Sum_probs=184.3

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------CeEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GYLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~lv~E   96 (483)
                      ++|.+.+.||+|+||+||+|+++.+++.+|+|++........                                .|+|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            479999999999999999999999999999999875432111                                199999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--e
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--V  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--~  174 (483)
                      ||.++.+..+......+++..+..++.||+.||.|||+.+++||||||+||++   +.++.+||+|||.+.......  .
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~  157 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI---SHNDVLKLCDFGFARNLSEGSNAN  157 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccCccccccccccc
Confidence            99997666655555679999999999999999999999999999999999999   567789999999998764322  2


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc-------------------
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI-------------------  235 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~-------------------  235 (483)
                      .....|++.|+|||++.+..++.++|+||+||++|+|++|++||.+.+.......+.....                   
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd07848         158 YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL  237 (287)
T ss_pred             ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence            2345789999999999888899999999999999999999999988765544433322110                   


Q ss_pred             CCCC---------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          236 DFKS---------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       236 ~~~~---------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .++.         .....+|.++.+||.+||++||.+|||++++|+||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            0000         0012368889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=1.2e-40  Score=330.36  Aligned_cols=222  Identities=28%  Similarity=0.516  Sum_probs=195.1

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeEEE
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYLKR   95 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~lv~   95 (483)
                      +|.+.+.||+|+||.||+|.++.+++.+|+|++.+....                                  +..|+||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            488999999999999999999999999999998753210                                  0118999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCce
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~  174 (483)
                      |||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... ....
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~~~  157 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGVT  157 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCCCc
Confidence            999999999999888899999999999999999999999999999999999999   677899999999987543 2223


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....+||+.|+|||++.+..++.++|+||+||++|+|++|..||.+.+.......+......++    ..++.++.+++.
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~  233 (323)
T cd05616         158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAICK  233 (323)
T ss_pred             cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CcCCHHHHHHHH
Confidence            3456799999999999988899999999999999999999999999888888888887665544    357899999999


Q ss_pred             HhCccCCCCCCCH-----HHHHcCCcCCC
Q 048594          255 RMLIRDPNNQITV-----AQILKHPWLNY  278 (483)
Q Consensus       255 ~~L~~dP~~R~t~-----~e~L~h~~~~~  278 (483)
                      +||+.+|.+|+++     .++++||||+.
T Consensus       234 ~~l~~~p~~R~~~~~~~~~~i~~h~~~~~  262 (323)
T cd05616         234 GLMTKHPGKRLGCGPEGERDIKEHAFFRY  262 (323)
T ss_pred             HHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence            9999999999984     89999999983

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.3e-41  Score=316.94  Aligned_cols=231  Identities=26%  Similarity=0.406  Sum_probs=197.8

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------CeEEE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------GYLKR   95 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~~lv~   95 (483)
                      ..-.|.-.+++|+|+||.||+|+...++..+|||.+.....-..                               ..+||
T Consensus        22 ~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl  101 (364)
T KOG0658|consen   22 VEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL  101 (364)
T ss_pred             eEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence            44568999999999999999999999999999999876542111                               16899


Q ss_pred             eccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           96 EHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        96 E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      ||++. +|.+.+..    +.+++...++-+++||++||.|||+.||+||||||.|+|++  ...+.+||||||.|..+..
T Consensus       102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LKicDFGSAK~L~~  178 (364)
T KOG0658|consen  102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLKICDFGSAKVLVK  178 (364)
T ss_pred             HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEEeccCCcceeecc
Confidence            99977 89998874    57899999999999999999999999999999999999995  4568999999999999998


Q ss_pred             CceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc----------------
Q 048594          172 GKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE----------------  234 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~----------------  234 (483)
                      ++....+..|..|+|||.+.+ ..|+.+.||||.||++.||+-|++.|.|.+..+++..|.+--                
T Consensus       179 ~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~  258 (364)
T KOG0658|consen  179 GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYT  258 (364)
T ss_pred             CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccc
Confidence            888888889999999998865 468999999999999999999999999999888888776411                


Q ss_pred             ----cCCCCCC-----CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCCC
Q 048594          235 ----IDFKSDP-----WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYEN  280 (483)
Q Consensus       235 ----~~~~~~~-----~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~~  280 (483)
                          ..+...+     ....++++.+|+.++|..+|.+|.++.|+|.||||....
T Consensus       259 ~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr  313 (364)
T KOG0658|consen  259 EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR  313 (364)
T ss_pred             cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence                0111111     135789999999999999999999999999999998443

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.2e-40  Score=335.87  Aligned_cols=226  Identities=29%  Similarity=0.447  Sum_probs=189.3

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEEe
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKRE   96 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~E   96 (483)
                      .|.+++.||+|+||+||+|.++.+++.||+|++.+....                                 +..|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            589999999999999999999999999999999764211                                 11199999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC----
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG----  172 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~----  172 (483)
                      ||+||+|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||+   +..+.+||+|||++..+...    
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili---~~~~~~kL~DFGl~~~~~~~~~~~  158 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI---DLDGHIKLTDFGLCTGFRWTHNSK  158 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE---CCCCCEEEeeCcCCcccccccccc
Confidence            99999999999988899999999999999999999999999999999999999   66789999999987532100    


Q ss_pred             --------------------------------------------ceecccccCCcccCccccCCCCCCCcCchHHHHHHH
Q 048594          173 --------------------------------------------KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL  208 (483)
Q Consensus       173 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil  208 (483)
                                                                  ......+||+.|+|||++.+..++.++||||+||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il  238 (381)
T cd05626         159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL  238 (381)
T ss_pred             cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence                                                        001234799999999999888899999999999999


Q ss_pred             HHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCc--cCCCCCCCHHHHHcCCcCCC
Q 048594          209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI--RDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       209 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~--~dP~~R~t~~e~L~h~~~~~  278 (483)
                      |+|++|..||...+.......+.........+....+++++.+||.+||.  .+|..|+++.+++.||||..
T Consensus       239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~  310 (381)
T cd05626         239 FEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE  310 (381)
T ss_pred             HHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence            99999999998887766666666543333344445689999999999654  45556999999999999973

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.6e-40  Score=328.96  Aligned_cols=217  Identities=30%  Similarity=0.537  Sum_probs=189.8

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~lv~E~~~g  100 (483)
                      +.||+|+||+||+|.++.+++.||+|++.+...                                  ....|+|||||+|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999999999999999999875310                                  0011899999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~  179 (483)
                      ++|.+++.....+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.++|+|||++.... .........
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli---~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTFC  157 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeeCCCCeecCcCCCcccccc
Confidence            9999999888899999999999999999999999999999999999999   667889999999987542 222334567


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCcc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR  259 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  259 (483)
                      ||+.|+|||++.+..++.++|+||+||++|+|++|..||.+.+.......+......++    +.++.++.++|.+||++
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~L~~  233 (320)
T cd05590         158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWLSQDAVDILKAFMTK  233 (320)
T ss_pred             cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHccc
Confidence            99999999999988899999999999999999999999999888888888877655443    35789999999999999


Q ss_pred             CCCCCCCH------HHHHcCCcCCC
Q 048594          260 DPNNQITV------AQILKHPWLNY  278 (483)
Q Consensus       260 dP~~R~t~------~e~L~h~~~~~  278 (483)
                      ||.+||++      ++++.||||..
T Consensus       234 dP~~R~~~~~~~~~~~~~~h~~f~~  258 (320)
T cd05590         234 NPTMRLGSLTLGGEEAILRHPFFKE  258 (320)
T ss_pred             CHHHCCCCCCCCCHHHHHcCCCcCC
Confidence            99999998      99999999973

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=3.3e-40  Score=321.80  Aligned_cols=224  Identities=25%  Similarity=0.395  Sum_probs=184.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------CeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------GYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~~lv~E~   97 (483)
                      ++|.+.+.||.|+||+||+|.++.++..||+|.+........                               .|+||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            469999999999999999999999999999999875432110                               1899999


Q ss_pred             cCCCChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-cee
Q 048594           98 CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~  175 (483)
                      +.| +|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||+   +.++.+||+|||++...... ...
T Consensus        85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~DfG~~~~~~~~~~~~  160 (288)
T cd07871          85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPTKTY  160 (288)
T ss_pred             CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEECcCcceeeccCCCccc
Confidence            986 8999887654 57999999999999999999999999999999999999   66788999999998765322 222


Q ss_pred             cccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC------------------
Q 048594          176 EEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID------------------  236 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~------------------  236 (483)
                      ....+++.|+|||++.+ ..++.++|+||+||++|+|++|.+||.+.+..+.+..+......                  
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07871         161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY  240 (288)
T ss_pred             cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence            34578999999998865 45789999999999999999999999888766665554432110                  


Q ss_pred             -CCC-------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 -FKS-------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 -~~~-------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                       ++.       ...+.+++++++||.+||++||.+|||++|+|+||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence             000       0123568899999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-41  Score=313.30  Aligned_cols=228  Identities=30%  Similarity=0.543  Sum_probs=208.9

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~   92 (483)
                      .-.++|..+++||+|.||.|.+|+.+.+|+.||+|++++...                                 .+..|
T Consensus       165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlC  244 (516)
T KOG0690|consen  165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLC  244 (516)
T ss_pred             eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEE
Confidence            345789999999999999999999999999999999988642                                 12229


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee-ccC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF-FEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~-~~~  171 (483)
                      +||||..||.|.-.|.....++|..++.+-..|+.||.|||+++||+||||.+|.|+   +..|.|||+|||++.. +..
T Consensus       245 FVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE~I~~  321 (516)
T KOG0690|consen  245 FVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKEEIKY  321 (516)
T ss_pred             EEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchhcccc
Confidence            999999999999999999999999999999999999999999999999999999999   7889999999999874 345


Q ss_pred             CceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          172 GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      +....+.||||.|+|||++....|+..+|+|.+||++|+|++|++||+..+....+..|....+.||.    .++++++.
T Consensus       322 g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr----~ls~eAkt  397 (516)
T KOG0690|consen  322 GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR----TLSPEAKT  397 (516)
T ss_pred             cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc----cCCHHHHH
Confidence            56677899999999999999999999999999999999999999999999999999999999999885    78999999


Q ss_pred             HHHHhCccCCCCCC-----CHHHHHcCCcCCCCC
Q 048594          252 LIRRMLIRDPNNQI-----TVAQILKHPWLNYEN  280 (483)
Q Consensus       252 li~~~L~~dP~~R~-----t~~e~L~h~~~~~~~  280 (483)
                      |+..+|.+||.+|.     .+.|+.+|+||..-+
T Consensus       398 LLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~  431 (516)
T KOG0690|consen  398 LLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVD  431 (516)
T ss_pred             HHHHHhhcChHhhcCCCchhHHHHHhhhhhccCC
Confidence            99999999999998     478999999998443

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.7e-40  Score=336.88  Aligned_cols=224  Identities=29%  Similarity=0.512  Sum_probs=191.6

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEEe
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKRE   96 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~E   96 (483)
                      +|.+++.||+|+||+||+|.++.+++.||+|++.+...                                 ....|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            68999999999999999999999999999999875321                                 011199999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC----
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG----  172 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~----  172 (483)
                      ||+||+|.+++.+.+.+++..++.++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||++..+...    
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~~~~~~~~~  158 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSK  158 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCcccccccccc
Confidence            99999999999888889999999999999999999999999999999999999   67789999999987532100    


Q ss_pred             --------------------------------------------ceecccccCCcccCccccCCCCCCCcCchHHHHHHH
Q 048594          173 --------------------------------------------KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL  208 (483)
Q Consensus       173 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil  208 (483)
                                                                  ......+||+.|+|||++.+..++.++||||+||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil  238 (382)
T cd05625         159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL  238 (382)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence                                                        001124689999999999988899999999999999


Q ss_pred             HHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCC---HHHHHcCCcCC
Q 048594          209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT---VAQILKHPWLN  277 (483)
Q Consensus       209 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~e~L~h~~~~  277 (483)
                      |+|++|.+||.+.+.......+.........+....+++++.++|.+|+ .+|.+|++   ++++++||||.
T Consensus       239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~  309 (382)
T cd05625         239 YEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFK  309 (382)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcC
Confidence            9999999999988877777777665444444445678999999999986 59999997   99999999997

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-41  Score=356.04  Aligned_cols=230  Identities=32%  Similarity=0.505  Sum_probs=202.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCC---------------------------------CCCcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS---------------------------------KSDEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~---------------------------------~~~~~~lv   94 (483)
                      .++|.++++||+|+||.|.+++++.|++.||+|++.+-.                                 .....|+|
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV  153 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV  153 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence            578999999999999999999999999999999998721                                 11122999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-  173 (483)
                      |||++||+|..++..-.++++..++.++..|+.||.-||+.|+|||||||+|||+   +..|+|||+|||.+..+...+ 
T Consensus       154 MdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~~dG~  230 (1317)
T KOG0612|consen  154 MDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMDADGT  230 (1317)
T ss_pred             EecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcCCCCc
Confidence            9999999999999988899999999999999999999999999999999999999   789999999999987776333 


Q ss_pred             -eecccccCCcccCccccC----C-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          174 -VYEEVVGTPLYMAPELLG----P-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       174 -~~~~~~gt~~y~aPE~~~----~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                       .....+|||.|.|||++.    + +.|+..+|+||+||++|||+.|..||+..+-.+++..|++..-.+..|.-..+|.
T Consensus       231 V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSe  310 (1317)
T KOG0612|consen  231 VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSE  310 (1317)
T ss_pred             EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCH
Confidence             335578999999999984    2 4689999999999999999999999999999999999999854444334456999


Q ss_pred             HHHHHHHHhCccCCCCCCC---HHHHHcCCcCCCCCC
Q 048594          248 SAKDLIRRMLIRDPNNQIT---VAQILKHPWLNYENG  281 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t---~~e~L~h~~~~~~~~  281 (483)
                      ++++||.+++. +|..|.+   ++++..||||.+..+
T Consensus       311 eakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  311 EAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             HHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence            99999999874 5888887   999999999985544

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-40  Score=323.10  Aligned_cols=228  Identities=36%  Similarity=0.562  Sum_probs=210.1

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------Ce
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GY   92 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~   92 (483)
                      -.|..-|.+.+.||+|-|.+|.+|+|--||..||||++.+.....-                                .|
T Consensus        14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKly   93 (864)
T KOG4717|consen   14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLY   93 (864)
T ss_pred             cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEE
Confidence            3677789999999999999999999999999999999988753221                                19


Q ss_pred             EEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           93 LKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      ||+|+-+||+|.+||-.. ..+.|..+.+++.||+.|+.|||+..+|||||||+|+.+.  ..-|.|||+|||++..+.+
T Consensus        94 LiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSNkf~P  171 (864)
T KOG4717|consen   94 LILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSNKFQP  171 (864)
T ss_pred             EEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeeccccccCCC
Confidence            999999999999998654 6799999999999999999999999999999999999987  4568999999999999999


Q ss_pred             CceecccccCCcccCccccCCCCCC-CcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          172 GKVYEEVVGTPLYMAPELLGPCKYG-KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      +....+.||+..|-|||++.+..|. +++||||||||||.|.+|++||...++.+.+..|+.-.+..|.    .++.+.+
T Consensus       172 G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPs----hvS~eCr  247 (864)
T KOG4717|consen  172 GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPS----HVSKECR  247 (864)
T ss_pred             cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCch----hhhHHHH
Confidence            9999999999999999999998884 7999999999999999999999999999999999988877664    7899999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      +||..||..||.+|.|.+++..|+|++.
T Consensus       248 dLI~sMLvRdPkkRAslEeI~s~~Wlq~  275 (864)
T KOG4717|consen  248 DLIQSMLVRDPKKRASLEEIVSTSWLQA  275 (864)
T ss_pred             HHHHHHHhcCchhhccHHHHhccccccC
Confidence            9999999999999999999999999983

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-40  Score=326.67  Aligned_cols=214  Identities=29%  Similarity=0.532  Sum_probs=187.5

Q ss_pred             ecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEEeccCCCCh
Q 048594           57 LCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKREHCDGGTL  103 (483)
Q Consensus        57 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~E~~~g~~L  103 (483)
                      ||+|+||.||+|.++.+++.||+|++.+...                                 ....|+|||||+|++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            7999999999999999999999999865321                                 0111999999999999


Q ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-CceecccccCC
Q 048594          104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GKVYEEVVGTP  182 (483)
Q Consensus       104 ~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~gt~  182 (483)
                      .+++...+++++..+..++.||+.||.|||+++|+||||||+||++   +.++.++|+|||++..... .......+||+
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  157 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDDKTNTFCGTP  157 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCCccccccCCc
Confidence            9999888899999999999999999999999999999999999999   6778999999999875422 22234467999


Q ss_pred             cccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCC
Q 048594          183 LYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN  262 (483)
Q Consensus       183 ~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  262 (483)
                      .|+|||++.+..++.++||||+||++|+|++|..||.+.........+......++    ..+++++++||.+||..||.
T Consensus       158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dp~  233 (312)
T cd05585         158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP----DGFDRDAKDLLIGLLSRDPT  233 (312)
T ss_pred             ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHcCCCHH
Confidence            99999999988899999999999999999999999998888888888777655443    46789999999999999999


Q ss_pred             CCC---CHHHHHcCCcCC
Q 048594          263 NQI---TVAQILKHPWLN  277 (483)
Q Consensus       263 ~R~---t~~e~L~h~~~~  277 (483)
                      +||   ++.++|.||||.
T Consensus       234 ~R~~~~~~~e~l~hp~~~  251 (312)
T cd05585         234 RRLGYNGAQEIKNHPFFS  251 (312)
T ss_pred             HcCCCCCHHHHHcCCCcC
Confidence            997   589999999998

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=2.5e-40  Score=330.07  Aligned_cols=223  Identities=28%  Similarity=0.465  Sum_probs=194.9

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCC-CEEEEEEeccCCCC---------------------------------CcCe
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTG-LQFACKSISKTSKS---------------------------------DEGY   92 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~~avK~~~~~~~~---------------------------------~~~~   92 (483)
                      -.++|.+.+.||+|+||.||+|.++.++ ..+|+|.+.+....                                 ...|
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY  107 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence            4467999999999999999999977655 68999998643210                                 1119


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......
T Consensus       108 lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a~~~~~~  184 (340)
T PTZ00426        108 LVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDTR  184 (340)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCCeecCCC
Confidence            999999999999999988899999999999999999999999999999999999999   67789999999999876432


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                        ....+||+.|+|||++.+..++.++|+||+||++|+|++|.+||.+.+.......+..+...++    +.+++.++++
T Consensus       185 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l  258 (340)
T PTZ00426        185 --TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP----KFLDNNCKHL  258 (340)
T ss_pred             --cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHH
Confidence              2356799999999999888889999999999999999999999999888888888887765544    3578999999


Q ss_pred             HHHhCccCCCCCC-----CHHHHHcCCcCCC
Q 048594          253 IRRMLIRDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       253 i~~~L~~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      |.+||+.||.+|+     |++++++||||..
T Consensus       259 i~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~  289 (340)
T PTZ00426        259 MKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN  289 (340)
T ss_pred             HHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            9999999999996     8999999999983

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=6.1e-40  Score=319.95  Aligned_cols=224  Identities=25%  Similarity=0.370  Sum_probs=186.1

Q ss_pred             cceEEeeeecccCceeEEEEEECC-CCCEEEEEEeccCCCC---------------------------------------
Q 048594           49 LHFTIAEELCRGESGRIYLCTENS-TGLQFACKSISKTSKS---------------------------------------   88 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~---------------------------------------   88 (483)
                      ++|.+.+.||+|+||+||+|.+.. +|..+|+|.+......                                       
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            479999999999999999999854 4688999988643211                                       


Q ss_pred             -CcCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           89 -DEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                       ...|+|+||+.+ +|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus        81 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~---~~~~~~kl~Dfg~  156 (290)
T cd07862          81 ETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGL  156 (290)
T ss_pred             CCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---cCCCCEEEccccc
Confidence             012799999975 899988754  458999999999999999999999999999999999999   5677899999999


Q ss_pred             ceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC-----
Q 048594          166 AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD-----  240 (483)
Q Consensus       166 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-----  240 (483)
                      +.............|++.|+|||.+.+..++.++||||+||++|+|++|.+||.+....+.+..+..........     
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~  236 (290)
T cd07862         157 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD  236 (290)
T ss_pred             eEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence            987655444445678999999999988889999999999999999999999999888777776665422110000     


Q ss_pred             ------------------CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          241 ------------------PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       241 ------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                                        ..+.+++.++++|.+||+.||++|||+.++|+||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence                              114577889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=2.9e-40  Score=328.17  Aligned_cols=216  Identities=31%  Similarity=0.551  Sum_probs=188.2

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEEeccCCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKREHCDGG  101 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~E~~~g~  101 (483)
                      +.||+|+||.||+|.++.+|+.||+|++.+....                                 +..|+||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999999999999999999754210                                 1119999999999


Q ss_pred             ChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-Cceeccccc
Q 048594          102 TLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GKVYEEVVG  180 (483)
Q Consensus       102 ~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~g  180 (483)
                      +|..++.....+++..+..++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||++..... .......+|
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  157 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML---DKDGHIKITDFGLCKEGITDAATMKTFCG  157 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE---CCCCcEEEecCcCCccCCCcccccccccC
Confidence            999999888889999999999999999999999999999999999999   6678899999999875322 222344579


Q ss_pred             CCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccC
Q 048594          181 TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD  260 (483)
Q Consensus       181 t~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  260 (483)
                      |+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+......++    ..+++++.+||.+||++|
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~d  233 (328)
T cd05593         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP----RTLSADAKSLLSGLLIKD  233 (328)
T ss_pred             CcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC----CCCCHHHHHHHHHHcCCC
Confidence            9999999999888899999999999999999999999988887777777766555443    367899999999999999


Q ss_pred             CCCCC-----CHHHHHcCCcCC
Q 048594          261 PNNQI-----TVAQILKHPWLN  277 (483)
Q Consensus       261 P~~R~-----t~~e~L~h~~~~  277 (483)
                      |.+|+     ++.++++||||.
T Consensus       234 P~~R~~~~~~~~~~il~h~~~~  255 (328)
T cd05593         234 PNKRLGGGPDDAKEIMRHSFFT  255 (328)
T ss_pred             HHHcCCCCCCCHHHHhcCCCcC
Confidence            99997     899999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.7e-40  Score=312.01  Aligned_cols=226  Identities=30%  Similarity=0.465  Sum_probs=193.6

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------------   90 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------------   90 (483)
                      ...|..++.||+|+||+||+|+.+.+|+.||+|.+......+.                                     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            3457788899999999999999999999999999987653211                                     


Q ss_pred             --CeEEEeccCCCChHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           91 --GYLKREHCDGGTLVDRISDRE----RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        91 --~~lv~E~~~g~~L~~~l~~~~----~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                        .|+|+||++- +|..++....    .++...+..+++||+.||+|||+++|+||||||.|||+   +..+.+||+|||
T Consensus        90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi---~~~G~lKlaDFG  165 (323)
T KOG0594|consen   90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI---SSSGVLKLADFG  165 (323)
T ss_pred             ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE---CCCCcEeeeccc
Confidence              1799999976 8999998765    47788999999999999999999999999999999999   678999999999


Q ss_pred             cceecc-CCceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCC
Q 048594          165 LAFFFE-EGKVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW  242 (483)
Q Consensus       165 ~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  242 (483)
                      +|+... +...+...++|.+|+|||++.+. .|+...|+||+|||++||+++++.|.+..+.+++..|.+-.-......|
T Consensus       166 lAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W  245 (323)
T KOG0594|consen  166 LARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW  245 (323)
T ss_pred             hHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence            999776 55557778899999999999876 6899999999999999999999999999998888887642211111111


Q ss_pred             --------------------------CCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          243 --------------------------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       243 --------------------------~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                                +..++...+++.+||+.+|.+|+|+..+|.||||.
T Consensus       246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~  306 (323)
T KOG0594|consen  246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFS  306 (323)
T ss_pred             CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhc
Confidence                                      23346899999999999999999999999999998

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=1.9e-40  Score=335.93  Aligned_cols=225  Identities=28%  Similarity=0.478  Sum_probs=191.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      .+|++++.||+|+||+||+|+++.+++.||+|++.+...                                 ....|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            369999999999999999999999999999999864321                                 11129999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC---
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG---  172 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~---  172 (483)
                      |||+||+|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||+   +..+.++|+|||++..+...   
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~ikL~DFG~a~~~~~~~~~  157 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS  157 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE---CCCCCEEEEeCCCCccccccccc
Confidence            999999999999988889999999999999999999999999999999999999   66789999999987432100   


Q ss_pred             -----------------------------------------ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHH
Q 048594          173 -----------------------------------------KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL  211 (483)
Q Consensus       173 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~l  211 (483)
                                                               ......+||+.|+|||++.+..++.++||||+||++|+|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel  237 (376)
T cd05598         158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM  237 (376)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence                                                     001134799999999999988899999999999999999


Q ss_pred             hhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCC---CHHHHHcCCcCC
Q 048594          212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI---TVAQILKHPWLN  277 (483)
Q Consensus       212 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---t~~e~L~h~~~~  277 (483)
                      ++|..||.+.........+.........+....+++++.++|.+|+ .+|.+|+   |+.++++||||+
T Consensus       238 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~  305 (376)
T cd05598         238 LVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFK  305 (376)
T ss_pred             hhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcC
Confidence            9999999988877777776655444444445578999999999976 5999999   999999999998

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=4.1e-40  Score=332.42  Aligned_cols=226  Identities=35%  Similarity=0.538  Sum_probs=193.7

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv   94 (483)
                      .++|.+.+.||+|+||.||+|.++.++..||+|++.+...                                 ....|+|
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv  121 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV  121 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence            4689999999999999999999999999999999864210                                 0111899


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-  173 (483)
                      ||||+||+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||.+....... 
T Consensus       122 ~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~~~~  197 (370)
T cd05596         122 MEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDANGM  197 (370)
T ss_pred             EcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccCCCc
Confidence            9999999999988654 68999999999999999999999999999999999999   677899999999998764332 


Q ss_pred             -eecccccCCcccCccccCCC----CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          174 -VYEEVVGTPLYMAPELLGPC----KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       174 -~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                       .....+||+.|+|||++.+.    .++.++|+|||||++|+|++|..||.+.+.......+.........+....+|.+
T Consensus       198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  277 (370)
T cd05596         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQ  277 (370)
T ss_pred             ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHH
Confidence             12345799999999998643    3788999999999999999999999998888888888775544444444568999


Q ss_pred             HHHHHHHhCccCCCC--CCCHHHHHcCCcCC
Q 048594          249 AKDLIRRMLIRDPNN--QITVAQILKHPWLN  277 (483)
Q Consensus       249 ~~~li~~~L~~dP~~--R~t~~e~L~h~~~~  277 (483)
                      +++||.+||..+|.+  |+|++++++||||+
T Consensus       278 ~~~li~~~L~~~p~r~~R~s~~ell~h~~~~  308 (370)
T cd05596         278 AKDLICAFLTDREVRLGRNGVDEIKSHPFFK  308 (370)
T ss_pred             HHHHHHHHccChhhccCCCCHHHHhcCcccC
Confidence            999999999999988  99999999999998

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=2e-40  Score=329.78  Aligned_cols=226  Identities=32%  Similarity=0.501  Sum_probs=193.2

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~   95 (483)
                      ++|.+.+.||+|+||+||+|.++.+|+.||+|++.+....                                 ...|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            4699999999999999999999999999999998764210                                 1119999


Q ss_pred             eccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           96 EHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      |||+|++|.+++... ..+++..+..++.||+.||.|||+++|+||||||+||++   +..+.+||+|||++..+.....
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~~~  157 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTANKM  157 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE---CCCCCEEeccCCCCeECCCCCc
Confidence            999999999999876 689999999999999999999999999999999999999   6778999999999987654332


Q ss_pred             --ecccccCCcccCccccC------CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          175 --YEEVVGTPLYMAPELLG------PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       175 --~~~~~gt~~y~aPE~~~------~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                        .....||+.|+|||++.      ...++.++||||+||++|+|++|..||........+..+.........+..+.++
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  237 (330)
T cd05601         158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVS  237 (330)
T ss_pred             eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCC
Confidence              22347899999999986      4457889999999999999999999999888777777776654333333345689


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      +++.+||.+||. +|.+|||+.+++.||||..
T Consensus       238 ~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~  268 (330)
T cd05601         238 SDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK  268 (330)
T ss_pred             HHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence            999999999998 9999999999999999983

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-40  Score=334.51  Aligned_cols=226  Identities=30%  Similarity=0.484  Sum_probs=189.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|.+++.||+|+||+||+|.++.+|+.||||++.+...                                 ....|+||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            479999999999999999999999999999999865320                                 01129999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--  173 (483)
                      |||+|++|.+++...+.+++..++.++.||+.||+|||+.||+||||||+|||+   +.++.++|+|||++.......  
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll---~~~~~~kl~DfGla~~~~~~~~~  157 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI---DRGGHIKLSDFGLSTGFHKQHDS  157 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEEeeccccccccccccc
Confidence            999999999999988899999999999999999999999999999999999999   567899999999986321100  


Q ss_pred             ----------e------------------------------------ecccccCCcccCccccCCCCCCCcCchHHHHHH
Q 048594          174 ----------V------------------------------------YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI  207 (483)
Q Consensus       174 ----------~------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi  207 (483)
                                .                                    ....+||+.|+|||++.+..++.++||||+||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  237 (377)
T cd05629         158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI  237 (377)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence                      0                                    002468999999999988889999999999999


Q ss_pred             HHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCC---CCHHHHHcCCcCCC
Q 048594          208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQ---ITVAQILKHPWLNY  278 (483)
Q Consensus       208 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R---~t~~e~L~h~~~~~  278 (483)
                      +|+|++|.+||.+......+..+.........+....++.++++||.+||. +|.+|   +|+.+++.||||+.
T Consensus       238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~  310 (377)
T cd05629         238 MFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG  310 (377)
T ss_pred             hhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence            999999999998888777777776543333333334678999999999997 77765   59999999999983

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2.5e-40  Score=333.01  Aligned_cols=226  Identities=32%  Similarity=0.517  Sum_probs=191.4

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|++++.||+|+||.||+|.++.+++.||+|++.+...                                 ....|+||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            469999999999999999999999999999999864321                                 01119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--  173 (483)
                      |||+|++|.+++.+.+.+++..+..++.||+.||+|||++||+||||||+|||+   +..+.++|+|||++..+....  
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~~~~~~  157 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAHRT  157 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCccccccccc
Confidence            999999999999988899999999999999999999999999999999999999   667899999999986542110  


Q ss_pred             ----------------------------------eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCC
Q 048594          174 ----------------------------------VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFW  219 (483)
Q Consensus       174 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~  219 (483)
                                                        .....+||+.|+|||++.+..++.++|+|||||++|+|++|..||.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~  237 (360)
T cd05627         158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (360)
T ss_pred             ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence                                              0113479999999999998889999999999999999999999999


Q ss_pred             CCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCC---CHHHHHcCCcCCC
Q 048594          220 AESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI---TVAQILKHPWLNY  278 (483)
Q Consensus       220 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---t~~e~L~h~~~~~  278 (483)
                      +.+.......+.........++...++++++++|.+|+ .+|.+|+   ++.+++.||||..
T Consensus       238 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~  298 (360)
T cd05627         238 SETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEG  298 (360)
T ss_pred             CCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCC
Confidence            88888877777764333322233357899999999987 4999998   5899999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-40  Score=296.23  Aligned_cols=221  Identities=31%  Similarity=0.566  Sum_probs=203.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~lv~   95 (483)
                      ++|.+.+.||+|-||.||+|+.++++..+|+|++.++....                                 ..|+++
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            57999999999999999999999999999999998865111                                 119999


Q ss_pred             eccCCCChHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           96 EHCDGGTLVDRIS--DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        96 E~~~g~~L~~~l~--~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ||..+|+|...|.  ...++++..++.+++|++.||.|||.++|+||||||+|+|+   +..+.+|++|||-+..-. ..
T Consensus       102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl---g~~~~lkiAdfGwsV~~p-~~  177 (281)
T KOG0580|consen  102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAP-SN  177 (281)
T ss_pred             EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc---CCCCCeeccCCCceeecC-CC
Confidence            9999999999999  55789999999999999999999999999999999999999   677899999999987754 44


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ...+.|||..|.|||...+..++..+|+|++|++.|+++.|.+||......+++..|....+.+|    +.++..+.++|
T Consensus       178 kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p----~~is~~a~dlI  253 (281)
T KOG0580|consen  178 KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP----STISGGAADLI  253 (281)
T ss_pred             CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC----cccChhHHHHH
Confidence            55788999999999999999999999999999999999999999999999999999999888877    58899999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcCC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+||.++|.+|++..|++.|||+.
T Consensus       254 ~~ll~~~p~~r~~l~~v~~hpwI~  277 (281)
T KOG0580|consen  254 SRLLVKNPIERLALTEVMDHPWIV  277 (281)
T ss_pred             HHHhccCccccccHHHHhhhHHHH
Confidence            999999999999999999999986

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=6.8e-40  Score=324.91  Aligned_cols=222  Identities=27%  Similarity=0.490  Sum_probs=193.4

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeEEE
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYLKR   95 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~lv~   95 (483)
                      +|.+.+.||+|+||+||+|.++.+|+.||+|++.+...                                  .+..|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            47889999999999999999999999999999875321                                  00118999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-Cce
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GKV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~~~  174 (483)
                      |||+|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.++|+|||++..... ...
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill---~~~~~ikL~Dfg~~~~~~~~~~~  157 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMVDGVT  157 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeccccccccCCCCcc
Confidence            999999999999988899999999999999999999999999999999999999   6678899999999875432 222


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .....||+.|+|||++.+..++.++|+||+||++|+|++|..||.+.........+......++    ..++.++.+++.
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~  233 (323)
T cd05615         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSICK  233 (323)
T ss_pred             ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHH
Confidence            3345789999999999888899999999999999999999999999888888888877665443    357899999999


Q ss_pred             HhCccCCCCCCC-----HHHHHcCCcCCC
Q 048594          255 RMLIRDPNNQIT-----VAQILKHPWLNY  278 (483)
Q Consensus       255 ~~L~~dP~~R~t-----~~e~L~h~~~~~  278 (483)
                      +||+++|.+|++     ..++++||||..
T Consensus       234 ~~l~~~p~~R~~~~~~~~~~i~~h~~f~~  262 (323)
T cd05615         234 GLMTKHPSKRLGCGPEGERDIREHAFFRR  262 (323)
T ss_pred             HHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence            999999999997     579999999983

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=4.9e-40  Score=324.93  Aligned_cols=217  Identities=29%  Similarity=0.503  Sum_probs=187.5

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~lv~E~~~g  100 (483)
                      +.||+|+||.||+|.++.+|..||+|.+.+...                                  ....|+|||||.|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            469999999999999999999999999875310                                  0011899999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-Cceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~  179 (483)
                      ++|..++...+++++..+..++.||+.||+|||++||+||||||+||++   +.++.++|+|||++..... .......+
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML---DRDGHIKIADFGMCKENVFGDNRASTFC  157 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEeCccCCCeecccCCCceeccC
Confidence            9999999888899999999999999999999999999999999999999   6677899999999875322 22334567


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCcc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR  259 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  259 (483)
                      ||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+......++    ..++.+++++|.+||+.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~  233 (316)
T cd05620         158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP----RWITKESKDILEKLFER  233 (316)
T ss_pred             CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHccC
Confidence            99999999999988899999999999999999999999998888777777766544333    35789999999999999


Q ss_pred             CCCCCCCH-HHHHcCCcCCC
Q 048594          260 DPNNQITV-AQILKHPWLNY  278 (483)
Q Consensus       260 dP~~R~t~-~e~L~h~~~~~  278 (483)
                      ||.+||++ +++++||||..
T Consensus       234 dP~~R~~~~~~~~~h~~f~~  253 (316)
T cd05620         234 DPTRRLGVVGNIRGHPFFKT  253 (316)
T ss_pred             CHHHcCCChHHHHcCCCcCC
Confidence            99999998 58889999973

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=4.4e-40  Score=326.00  Aligned_cols=216  Identities=26%  Similarity=0.491  Sum_probs=189.8

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~lv~E~~~g  100 (483)
                      +.||+|+||.||+|.++.+++.||+|++.+...                                  ....|+|||||+|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            469999999999999999999999999875321                                  0011899999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~  179 (483)
                      ++|..++.....+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.... ........+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEGILNGVTTTTFC  157 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceecccCCccccccc
Confidence            9999999888899999999999999999999999999999999999999   677899999999987543 222334567


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCcc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR  259 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  259 (483)
                      ||+.|+|||++.+..++.++|+||+||++|+|++|+.||.+.+.......+......++    ..++.++.++|.+||++
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~ll~~~L~~  233 (321)
T cd05591         158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP----VWLSKEAVSILKAFMTK  233 (321)
T ss_pred             cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhcc
Confidence            89999999999888899999999999999999999999999988888888887665443    35789999999999999


Q ss_pred             CCCCCC-------CHHHHHcCCcCC
Q 048594          260 DPNNQI-------TVAQILKHPWLN  277 (483)
Q Consensus       260 dP~~R~-------t~~e~L~h~~~~  277 (483)
                      ||.+||       ++.++++||||.
T Consensus       234 dp~~R~~~~~~~~~~~~~~~hp~~~  258 (321)
T cd05591         234 NPNKRLGCVASQGGEDAIKQHPFFK  258 (321)
T ss_pred             CHHHcCCCCCCCCCHHHHhcCCccC
Confidence            999999       999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-40  Score=316.05  Aligned_cols=227  Identities=29%  Similarity=0.444  Sum_probs=192.8

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------CeEEEe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------GYLKRE   96 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~~lv~E   96 (483)
                      .++|.+..+||.|..++||+|++..++..||||++........                               .|+||.
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp  104 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP  104 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence            4689999999999999999999999999999999987653332                               199999


Q ss_pred             ccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           97 HCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      ||.+|+++++++..  ..++|..++.++++++.||.|||.+|.+|||||+.|||+   +.+|.|||+|||++..+.....
T Consensus       105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa~l~~~G~  181 (516)
T KOG0582|consen  105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVSASLFDSGD  181 (516)
T ss_pred             hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceeeeeecccCc
Confidence            99999999999865  459999999999999999999999999999999999999   7889999999998876643321


Q ss_pred             ----e-cccccCCcccCccccCC--CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC------CCC
Q 048594          175 ----Y-EEVVGTPLYMAPELLGP--CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK------SDP  241 (483)
Q Consensus       175 ----~-~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~------~~~  241 (483)
                          . ....|||.|||||++.+  ..|+.|+||||+|++..||.+|..||.......++..-.++.++.+      ...
T Consensus       182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~  261 (516)
T KOG0582|consen  182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDE  261 (516)
T ss_pred             eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHH
Confidence                1 45689999999999643  3689999999999999999999999988776666555555444321      122


Q ss_pred             CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          242 WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       242 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ...++..++.+|..||++||++|||++++|+|+||+
T Consensus       262 ~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk  297 (516)
T KOG0582|consen  262 DKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFK  297 (516)
T ss_pred             hhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHh
Confidence            234677899999999999999999999999999998

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=5.3e-40  Score=325.68  Aligned_cols=217  Identities=31%  Similarity=0.538  Sum_probs=189.1

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEEeccCCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKREHCDGG  101 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~E~~~g~  101 (483)
                      +.||+|+||.||+|.++.+|..||+|++.+....                                 ...|+|||||.|+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4699999999999999999999999998753210                                 1118999999999


Q ss_pred             ChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCceeccccc
Q 048594          102 TLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVG  180 (483)
Q Consensus       102 ~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~g  180 (483)
                      +|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... .........|
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  157 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCG  157 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---cCCCCEEecccHHhccccCCCCccccccC
Confidence            999999888899999999999999999999999999999999999999   667889999999987532 2223344679


Q ss_pred             CCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccC
Q 048594          181 TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD  260 (483)
Q Consensus       181 t~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  260 (483)
                      |+.|+|||++.+..++.++|+||+||++|+|++|..||...+.......+......++    ..+++++.++|.+||.+|
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~d  233 (323)
T cd05595         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKD  233 (323)
T ss_pred             CcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHccCC
Confidence            9999999999888899999999999999999999999998888777777776655443    367899999999999999


Q ss_pred             CCCCC-----CHHHHHcCCcCCC
Q 048594          261 PNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       261 P~~R~-----t~~e~L~h~~~~~  278 (483)
                      |.+|+     ++.++++||||..
T Consensus       234 P~~R~~~~~~~~~~~l~h~~~~~  256 (323)
T cd05595         234 PKQRLGGGPSDAKEVMEHRFFLS  256 (323)
T ss_pred             HHHhCCCCCCCHHHHHcCCCcCC
Confidence            99998     8999999999983

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=7.3e-40  Score=340.67  Aligned_cols=229  Identities=23%  Similarity=0.302  Sum_probs=183.5

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------------CCc
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------------SDE   90 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------------~~~   90 (483)
                      ..++|.+++.||+|+||+||+|.+..+++.||||++.....                                    ...
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~  206 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH  206 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence            35789999999999999999999999999999999854210                                    011


Q ss_pred             CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCC-------------CC
Q 048594           91 GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDE-------------NA  156 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~-------------~~  156 (483)
                      .|+|+|++ |++|.+++...+.+++..+..++.||+.||.|||+ .||+||||||+|||+...+.             ..
T Consensus       207 ~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~  285 (467)
T PTZ00284        207 MCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPC  285 (467)
T ss_pred             EEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCc
Confidence            27899988 66899999888899999999999999999999998 59999999999999964321             23


Q ss_pred             cEEEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC
Q 048594          157 TLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID  236 (483)
Q Consensus       157 ~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~  236 (483)
                      .+||+|||.+.....  .....+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+......
T Consensus       286 ~vkl~DfG~~~~~~~--~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~  363 (467)
T PTZ00284        286 RVRICDLGGCCDERH--SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGR  363 (467)
T ss_pred             eEEECCCCccccCcc--ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCC
Confidence            599999998764322  223568999999999999989999999999999999999999999887765555443321110


Q ss_pred             CCC---------------------------C---------CC--CCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          237 FKS---------------------------D---------PW--PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       237 ~~~---------------------------~---------~~--~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      ++.                           .         .+  ...++.+.+||.+||++||.+|||++|+|+||||..
T Consensus       364 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~  443 (467)
T PTZ00284        364 LPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLK  443 (467)
T ss_pred             CCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccc
Confidence            000                           0         00  011456789999999999999999999999999984

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=7.3e-40  Score=323.70  Aligned_cols=217  Identities=30%  Similarity=0.510  Sum_probs=187.5

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~lv~E~~~g  100 (483)
                      +.||+|+||.||+|.++.+++.||+|++.+...                                  ....|+|||||+|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999999999999999999875321                                  0111899999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-Cceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~  179 (483)
                      ++|..++...+.+++..+..++.||+.||.|||+++|+||||||+||++   +.++.+||+|||++..... .......+
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~a~~~~~~~~~~~~~~  157 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFC  157 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE---CCCCCEEEccCcCCeECCCCCCcccccc
Confidence            9999999888899999999999999999999999999999999999999   6678899999999976432 22334567


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCcc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR  259 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  259 (483)
                      ||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+......++    ..++.++.++|.+||..
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~ll~~~l~~  233 (316)
T cd05592         158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP----RWISKEAKDCLSKLFER  233 (316)
T ss_pred             CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccC
Confidence            99999999999988899999999999999999999999999888777777766544332    35789999999999999


Q ss_pred             CCCCCCCH-HHHHcCCcCCC
Q 048594          260 DPNNQITV-AQILKHPWLNY  278 (483)
Q Consensus       260 dP~~R~t~-~e~L~h~~~~~  278 (483)
                      +|.+||++ .++++||||..
T Consensus       234 ~P~~R~~~~~~l~~h~~~~~  253 (316)
T cd05592         234 DPTKRLGVDGDIRQHPFFRG  253 (316)
T ss_pred             CHHHcCCChHHHHcCcccCC
Confidence            99999986 48889999983

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=7.3e-40  Score=330.34  Aligned_cols=230  Identities=33%  Similarity=0.528  Sum_probs=193.3

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcC
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEG   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~   91 (483)
                      ....++|++.+.||+|+||.||+|.++.+++.+|+|++.+...                                 ....
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            3445789999999999999999999999999999999865211                                 0111


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+|||||+||+|.+++... .+++..+..++.||+.||+|||+++|+||||||+|||+   +..+.+||+|||++.....
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~~  194 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDE  194 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceeccc
Confidence            9999999999999999654 68999999999999999999999999999999999999   6778999999999987643


Q ss_pred             Cce--ecccccCCcccCccccCCC----CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCC
Q 048594          172 GKV--YEEVVGTPLYMAPELLGPC----KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       172 ~~~--~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      ...  ....+||+.|+|||++.+.    .++.++|+||+||++|+|++|..||.+.+.......+......+..+....+
T Consensus       195 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~  274 (370)
T cd05621         195 TGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEI  274 (370)
T ss_pred             CCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccC
Confidence            322  2356799999999998653    2678999999999999999999999998888888888765544333333467


Q ss_pred             CHHHHHHHHHhCccCCCC--CCCHHHHHcCCcCCC
Q 048594          246 SSSAKDLIRRMLIRDPNN--QITVAQILKHPWLNY  278 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~--R~t~~e~L~h~~~~~  278 (483)
                      +..++++|.+||..+|.+  |+|+.++++||||+.
T Consensus       275 s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~  309 (370)
T cd05621         275 SKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN  309 (370)
T ss_pred             CHHHHHHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence            999999999999865544  899999999999983

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=4.1e-40  Score=326.81  Aligned_cols=216  Identities=31%  Similarity=0.553  Sum_probs=188.3

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEEeccCCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKREHCDGG  101 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~E~~~g~  101 (483)
                      +.||+|+||.||+|.++.+|+.||+|++.+....                                 ...|+|||||.|+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999999999999999999753210                                 0119999999999


Q ss_pred             ChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCceecccc
Q 048594          102 TLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVV  179 (483)
Q Consensus       102 ~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~  179 (483)
                      +|..++.....+++..+..++.||+.||.|||+ +||+||||||+|||+   +.++.+||+|||++.... .........
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFC  157 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---CCCCCEEEecCCCCeecCCCCccccccc
Confidence            999999888889999999999999999999997 799999999999999   677899999999987532 222333457


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCcc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR  259 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  259 (483)
                      ||+.|+|||++.+..++.++||||+||++|+|++|..||.+.........+......++    ..+++++.+||.+||++
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~L~~  233 (325)
T cd05594         158 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPEAKSLLSGLLKK  233 (325)
T ss_pred             CCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhhc
Confidence            99999999999888899999999999999999999999998887777777776655544    35789999999999999


Q ss_pred             CCCCCC-----CHHHHHcCCcCC
Q 048594          260 DPNNQI-----TVAQILKHPWLN  277 (483)
Q Consensus       260 dP~~R~-----t~~e~L~h~~~~  277 (483)
                      ||.+|+     ++.++++||||.
T Consensus       234 dP~~R~~~~~~~~~~il~h~~~~  256 (325)
T cd05594         234 DPKQRLGGGPDDAKEIMQHKFFA  256 (325)
T ss_pred             CHHHhCCCCCCCHHHHhcCCCcC
Confidence            999997     999999999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=2.3e-39  Score=315.48  Aligned_cols=223  Identities=28%  Similarity=0.440  Sum_probs=185.2

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------------------
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------------------   89 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------------   89 (483)
                      +|.+.+.||+|+||+||+|.++.+|+.+|+|.+.......                                        
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            5899999999999999999999999999999986532110                                        


Q ss_pred             cCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           90 EGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                      ..++|+||+.+ +|.+++...  ..+++..+..++.||+.||.|||++|++||||||+||++   +.++.+||+|||++.
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~kl~dfg~~~  156 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGQVKLADFGLAR  156 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccCccc
Confidence            01799999986 898888764  358999999999999999999999999999999999999   567789999999998


Q ss_pred             eccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc-----------C
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI-----------D  236 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~-----------~  236 (483)
                      ............|++.|+|||++.+..++.++|+||+||++|+|++|.+||.+......+..+.....           .
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07863         157 IYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT  236 (288)
T ss_pred             cccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccc
Confidence            76544444455789999999999888899999999999999999999999988776665555433110           0


Q ss_pred             -----CC-------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 -----FK-------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 -----~~-------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                           +.       ....+.++..+.++|.+||++||.+|||+.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         237 LPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             ccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                 00       01124577889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-40  Score=312.81  Aligned_cols=226  Identities=28%  Similarity=0.500  Sum_probs=205.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~lv   94 (483)
                      .+|.++.+||.|+||.|.++..+.|.+.||||++++...-                                  +..|+|
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            4799999999999999999999999999999999886421                                  111999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee-ccCCc
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF-FEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~-~~~~~  173 (483)
                      |||+.||+|.-.|++-+++.|..+..++..|+-||-+||++||++||||.+||++   +..+.|||+|||++.. +..+.
T Consensus       429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni~~~~  505 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIFDGV  505 (683)
T ss_pred             EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeecccccccccCCc
Confidence            9999999999999999999999999999999999999999999999999999999   7889999999999874 23455


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      +..+.||||.|+|||++.-.+|+..+|+||+||+||||+.|++||.+.++.+.+.+|+.....+|.    .+|.++.++.
T Consensus       506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPK----slSkEAv~ic  581 (683)
T KOG0696|consen  506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPK----SLSKEAVAIC  581 (683)
T ss_pred             ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcc----cccHHHHHHH
Confidence            667899999999999999889999999999999999999999999999999999999999888774    7899999999


Q ss_pred             HHhCccCCCCCCCH-----HHHHcCCcCCCCCC
Q 048594          254 RRMLIRDPNNQITV-----AQILKHPWLNYENG  281 (483)
Q Consensus       254 ~~~L~~dP~~R~t~-----~e~L~h~~~~~~~~  281 (483)
                      +.+|.+.|.+|..+     .++..||||+.-.+
T Consensus       582 kg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW  614 (683)
T KOG0696|consen  582 KGLLTKHPGKRLGCGPEGERDIREHPFFRRIDW  614 (683)
T ss_pred             HHHhhcCCccccCCCCccccchhhCcchhhccH
Confidence            99999999999865     58999999985443

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.2e-39  Score=325.04  Aligned_cols=225  Identities=28%  Similarity=0.446  Sum_probs=183.6

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------------CcCe
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------------DEGY   92 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------------~~~~   92 (483)
                      +|++.+.||+|+||.||+|+++.+|..||||.+......                                     ...|
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            599999999999999999999999999999988642100                                     0128


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|||||. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......
T Consensus        81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~  156 (338)
T cd07859          81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVAFND  156 (338)
T ss_pred             EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCccccccccc
Confidence            9999995 5899999888889999999999999999999999999999999999999   67789999999998754321


Q ss_pred             c----eecccccCCcccCccccCC--CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHc--------------
Q 048594          173 K----VYEEVVGTPLYMAPELLGP--CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS--------------  232 (483)
Q Consensus       173 ~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~--------------  232 (483)
                      .    ......||+.|+|||++.+  ..++.++||||+||++|+|++|++||.+.+....+..+..              
T Consensus       157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~  236 (338)
T cd07859         157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR  236 (338)
T ss_pred             cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence            1    1234578999999999865  5688999999999999999999999987664433222211              


Q ss_pred             -------------cccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          233 -------------REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       233 -------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                   .........++.+++.+.++|.+||..||++|||++++|+||||+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~  295 (338)
T cd07859         237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKG  295 (338)
T ss_pred             hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhh
Confidence                         0000111123567889999999999999999999999999999983

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1.5e-39  Score=322.69  Aligned_cols=220  Identities=29%  Similarity=0.499  Sum_probs=191.0

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------------CCcCeEE
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------------SDEGYLK   94 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------------~~~~~lv   94 (483)
                      |.+++.||+|+||.||+|.++.+|+.||||++.+...                                    ....|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            7889999999999999999999999999999864320                                    0011999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-Cc
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~~  173 (483)
                      ||||.|++|...+.. +.+++..+..++.||+.||.|||++|++||||||+||++   +.++.+||+|||++..... ..
T Consensus        81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~~  156 (324)
T cd05589          81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGFGD  156 (324)
T ss_pred             EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCcEEeCcccCCccCCCCCC
Confidence            999999999988865 479999999999999999999999999999999999999   6678999999998865322 22


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      .....+|++.|+|||.+.+..++.++|+|||||++|+|++|..||.+.+.......+......++    ..+++.+.++|
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li  232 (324)
T cd05589         157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP----RFLSREAISIM  232 (324)
T ss_pred             cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHH
Confidence            23456799999999999988899999999999999999999999999888888888877655443    36789999999


Q ss_pred             HHhCccCCCCCC-----CHHHHHcCCcCCC
Q 048594          254 RRMLIRDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       254 ~~~L~~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      .+||+.||.+||     ++.++++||||+.
T Consensus       233 ~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~  262 (324)
T cd05589         233 RRLLRRNPERRLGSGEKDAEDVKKQPFFRD  262 (324)
T ss_pred             HHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence            999999999999     7999999999973

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=6.4e-40  Score=325.15  Aligned_cols=217  Identities=29%  Similarity=0.515  Sum_probs=189.1

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~lv~E~~~g  100 (483)
                      +.||+|+||+||+|.++.+|+.||+|++.+...                                  ....|+|||||.|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            469999999999999999999999999875321                                  0011999999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-Cceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~  179 (483)
                      ++|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... .......+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGIEHSKTTSTFC  157 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeccCCCcccccCCCcccccc
Confidence            9999999988899999999999999999999999999999999999999   6678999999999875322 22234457


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCcc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR  259 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  259 (483)
                      ||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+.......+    +.+++.+.++|.+||++
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~  233 (323)
T cd05575         158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK----PNISVSARHLLEGLLQK  233 (323)
T ss_pred             CChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhc
Confidence            99999999999988899999999999999999999999999888888888877655433    46799999999999999


Q ss_pred             CCCCCCCH----HHHHcCCcCCC
Q 048594          260 DPNNQITV----AQILKHPWLNY  278 (483)
Q Consensus       260 dP~~R~t~----~e~L~h~~~~~  278 (483)
                      ||.+||++    .++++||||..
T Consensus       234 ~p~~R~~~~~~~~~il~~~~~~~  256 (323)
T cd05575         234 DRTKRLGAKDDFLEIKNHVFFSS  256 (323)
T ss_pred             CHHhCCCCCCCHHHHHcCCCcCC
Confidence            99999988    69999999973

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=6.7e-40  Score=326.22  Aligned_cols=221  Identities=29%  Similarity=0.481  Sum_probs=182.5

Q ss_pred             ceEEeeeecccCceeEEEEEEC---CCCCEEEEEEeccCCC-----------------------------------CCcC
Q 048594           50 HFTIAEELCRGESGRIYLCTEN---STGLQFACKSISKTSK-----------------------------------SDEG   91 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~-----------------------------------~~~~   91 (483)
                      +|.+.+.||+|+||.||+|.+.   .+|+.||+|++.+...                                   ....
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4899999999999999999864   5789999999864210                                   0011


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+|||||.|++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili---~~~~~~kl~DfG~~~~~~~  157 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL---DSEGHVVLTDFGLSKEFLS  157 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE---CCCCCEEEeeCcCCccccc
Confidence            8999999999999999888889999999999999999999999999999999999999   5677999999999876532


Q ss_pred             Cc--eecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCCh----HHHHHHHHccccCCCCCCCCC
Q 048594          172 GK--VYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESL----YGTLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       172 ~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~  244 (483)
                      ..  .....+||+.|+|||++.+. .++.++|||||||++|+|++|..||.....    ......+.....    ...+.
T Consensus       158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~  233 (332)
T cd05614         158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP----PFPSF  233 (332)
T ss_pred             cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC----CCCCC
Confidence            22  22345799999999998764 478899999999999999999999965332    223333333322    22246


Q ss_pred             CCHHHHHHHHHhCccCCCCCC-----CHHHHHcCCcCC
Q 048594          245 ISSSAKDLIRRMLIRDPNNQI-----TVAQILKHPWLN  277 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~-----t~~e~L~h~~~~  277 (483)
                      +++.+.++|.+||+.||.+||     +++++++||||.
T Consensus       234 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~  271 (332)
T cd05614         234 IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFK  271 (332)
T ss_pred             CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcC
Confidence            889999999999999999999     888999999997

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=2.1e-39  Score=318.45  Aligned_cols=226  Identities=24%  Similarity=0.358  Sum_probs=179.5

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEEe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKRE   96 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E   96 (483)
                      .++|.+.+.||+|+||.||+|.++.+|+.||+|++.......                               ..|+|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            467999999999999999999999999999999987543211                               1199999


Q ss_pred             ccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ce
Q 048594           97 HCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KV  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~  174 (483)
                      ||.+ +|.+++... +.+++..+..++.||+.||+|||+++|+||||||+||++   +.++.+||+|||++...... ..
T Consensus        84 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~  159 (303)
T cd07869          84 YVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI---SDTGELKLADFGLARAKSVPSHT  159 (303)
T ss_pred             CCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECCCCcceeccCCCcc
Confidence            9965 788877654 578999999999999999999999999999999999999   56788999999998764322 22


Q ss_pred             ecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHHccccC--------------CC
Q 048594          175 YEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESL-YGTLTAIMSREID--------------FK  238 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~-~~~~~~i~~~~~~--------------~~  238 (483)
                      .....+++.|+|||++.+. .++.++|+||+||++|+|++|..||.+... ...+..+......              +.
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (303)
T cd07869         160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFK  239 (303)
T ss_pred             CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccc
Confidence            3345789999999988653 578899999999999999999999987533 2333332211000              00


Q ss_pred             CCC------------C--CCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          239 SDP------------W--PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       239 ~~~------------~--~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ...            +  ...++.+++||.+||++||.+|||+.|+|+||||+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~  292 (303)
T cd07869         240 PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFS  292 (303)
T ss_pred             cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccc
Confidence            000            0  12457899999999999999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.2e-39  Score=335.77  Aligned_cols=229  Identities=23%  Similarity=0.295  Sum_probs=185.2

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCe
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGY   92 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~   92 (483)
                      ...+|.+.+.||+|+||.||+|.+..+++.||||.+......                                  ...|
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~  143 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLN  143 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEE
Confidence            346899999999999999999999999999999988543200                                  0125


Q ss_pred             EEEeccCCCChHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           93 LKREHCDGGTLVDRIS----DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~----~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      +|||||++ +|.+++.    ....+++..++.++.||+.||+|||+++|+||||||+|||+..  ..+.+||+|||++..
T Consensus       144 lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~--~~~~vkL~DFGla~~  220 (440)
T PTZ00036        144 VVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP--NTHTLKLCDFGSAKN  220 (440)
T ss_pred             EEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC--CCCceeeeccccchh
Confidence            89999986 6777664    3467999999999999999999999999999999999999942  334799999999987


Q ss_pred             ccCCceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc-------------
Q 048594          169 FEEGKVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE-------------  234 (483)
Q Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~-------------  234 (483)
                      +..........||+.|+|||++.+. .++.++||||+||++|+|++|.+||.+......+..+....             
T Consensus       221 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  300 (440)
T PTZ00036        221 LLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNP  300 (440)
T ss_pred             ccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhch
Confidence            6555444556789999999988653 68999999999999999999999999887666655544311             


Q ss_pred             ----cCCCCCC--------CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          235 ----IDFKSDP--------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       235 ----~~~~~~~--------~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                          ..++...        ....|+++.+||.+||++||.+|||+.|+|.||||..
T Consensus       301 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~  356 (440)
T PTZ00036        301 NYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD  356 (440)
T ss_pred             hhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence                1111100        1236789999999999999999999999999999973

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-40  Score=307.22  Aligned_cols=234  Identities=34%  Similarity=0.589  Sum_probs=203.9

Q ss_pred             cccccceEE-eeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCe
Q 048594           45 EDIKLHFTI-AEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGY   92 (483)
Q Consensus        45 ~~i~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~   92 (483)
                      ..|.+.|++ .+.||+|+|+.|--|+...||..||||++.+.....                               ..|
T Consensus        73 g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FY  152 (463)
T KOG0607|consen   73 GKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFY  152 (463)
T ss_pred             chHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEE
Confidence            357778887 567999999999999999999999999998864221                               119


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-  171 (483)
                      ||+|-+.||+|+..|.++..++|.++..+++.|+.||.|||.+||.||||||+|||....+.-.-||||||.+...... 
T Consensus       153 LVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~  232 (463)
T KOG0607|consen  153 LVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN  232 (463)
T ss_pred             EEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccC
Confidence            9999999999999999999999999999999999999999999999999999999997666566799999988654321 


Q ss_pred             -------CceecccccCCcccCccccC-----CCCCCCcCchHHHHHHHHHHhhCCCCCCCCC---------------hH
Q 048594          172 -------GKVYEEVVGTPLYMAPELLG-----PCKYGKEIDIWSAGLILYNLLSGAQPFWAES---------------LY  224 (483)
Q Consensus       172 -------~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~~ll~g~~pf~~~~---------------~~  224 (483)
                             .....+.+|+..|||||+..     ...|..++|.||||||+|-||+|.+||.|.-               ..
T Consensus       233 ~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~  312 (463)
T KOG0607|consen  233 NDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN  312 (463)
T ss_pred             CCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHH
Confidence                   11234568999999999862     3357899999999999999999999996532               35


Q ss_pred             HHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          225 GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       225 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      ..++.|..+.+.||...|..+|.+++++|+.+|..++..|.++.++++|||++.
T Consensus       313 ~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~  366 (463)
T KOG0607|consen  313 KLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQR  366 (463)
T ss_pred             HHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccc
Confidence            678999999999999999999999999999999999999999999999999983

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1.2e-39  Score=322.53  Aligned_cols=217  Identities=29%  Similarity=0.506  Sum_probs=189.1

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~lv~E~~~g  100 (483)
                      +.||+|+||+||+|.++.++..||||++.+...                                  ....|+|||||.|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999999999999999999875320                                  0011999999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~  179 (483)
                      ++|..++...+.+++..+..++.||+.||.|||+++++||||||+||++   +.++.++|+|||++.... ........+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGVTTSTFC  157 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE---CCCCcEEecccCCCeecCcCCCccccee
Confidence            9999999888899999999999999999999999999999999999999   667899999999987532 222233457


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCcc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR  259 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  259 (483)
                      |++.|+|||++.+..++.++|+||+||++|+|++|..||.+.+.......+......++    ..++..+.+||.+||..
T Consensus       158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~  233 (318)
T cd05570         158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP----RWLSKEAKSILKSFLTK  233 (318)
T ss_pred             cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHccC
Confidence            89999999999988899999999999999999999999998888887777776655443    35789999999999999


Q ss_pred             CCCCCCCH-----HHHHcCCcCCC
Q 048594          260 DPNNQITV-----AQILKHPWLNY  278 (483)
Q Consensus       260 dP~~R~t~-----~e~L~h~~~~~  278 (483)
                      ||.+|||+     .+++.||||+.
T Consensus       234 dP~~R~s~~~~~~~~ll~~~~~~~  257 (318)
T cd05570         234 NPEKRLGCLPTGEQDIKGHPFFRE  257 (318)
T ss_pred             CHHHcCCCCCCCHHHHhcCCCcCC
Confidence            99999999     99999999983

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.8e-39  Score=320.90  Aligned_cols=217  Identities=28%  Similarity=0.479  Sum_probs=187.2

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~lv~E~~~g  100 (483)
                      +.||+|+||+||+|.++.+++.||||++.....                                  .+..|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            469999999999999999999999999875310                                  0011899999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-Cceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~  179 (483)
                      ++|.+++.....+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++..... ........
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL---DTDGHIKIADFGMCKENMLGDAKTCTFC  157 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEccCCcceECCCCCCceeeec
Confidence            9999999888889999999999999999999999999999999999999   5677899999999875322 22234567


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCcc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR  259 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  259 (483)
                      ||+.|+|||++.+..++.++|+||+||++|+|++|..||.+.+.......+......++    ..++.+++++|.+||+.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~  233 (316)
T cd05619         158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP----RWLTREAKDILVKLFVR  233 (316)
T ss_pred             CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHHHHhcc
Confidence            89999999999888899999999999999999999999998887777777765543332    35789999999999999


Q ss_pred             CCCCCCCHH-HHHcCCcCCC
Q 048594          260 DPNNQITVA-QILKHPWLNY  278 (483)
Q Consensus       260 dP~~R~t~~-e~L~h~~~~~  278 (483)
                      ||.+||++. ++++||||+.
T Consensus       234 ~P~~R~~~~~~l~~h~~~~~  253 (316)
T cd05619         234 EPERRLGVKGDIRQHPFFRE  253 (316)
T ss_pred             CHhhcCCChHHHHcCcccCC
Confidence            999999996 8999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1.6e-39  Score=323.12  Aligned_cols=216  Identities=26%  Similarity=0.462  Sum_probs=181.8

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~lv~E~~~g  100 (483)
                      +.||+|+||.||+|.++.+++.||+|++.+....                                  ...|+|||||+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4699999999999999999999999999753210                                  011999999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec-cCCceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~-~~~~~~~~~~  179 (483)
                      ++|.+++...+++++..+..++.||+.||.|||++|++||||||+||++   +.++.+||+|||++... .........+
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGDTTSTFC  157 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEECcCccccccccCCCcccccc
Confidence            9999999888899999999999999999999999999999999999999   66788999999998752 2233344568


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC---------hHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES---------LYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      ||+.|+|||++.+..++.++|+||+||++|+|++|..||....         .......+......++    ..++.++.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~  233 (329)
T cd05588         158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAS  233 (329)
T ss_pred             CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC----CCCCHHHH
Confidence            9999999999998889999999999999999999999995321         1223344444444332    35789999


Q ss_pred             HHHHHhCccCCCCCCC------HHHHHcCCcCC
Q 048594          251 DLIRRMLIRDPNNQIT------VAQILKHPWLN  277 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t------~~e~L~h~~~~  277 (483)
                      ++|.+||++||.+|+|      ++++++||||.
T Consensus       234 ~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~  266 (329)
T cd05588         234 SVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR  266 (329)
T ss_pred             HHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCC
Confidence            9999999999999997      78999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=2.5e-39  Score=326.63  Aligned_cols=227  Identities=34%  Similarity=0.520  Sum_probs=192.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv   94 (483)
                      .++|.+.+.||+|+||.||+|.++.+++.+|+|++.+...                                 ....|+|
T Consensus        42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv  121 (371)
T cd05622          42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV  121 (371)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            4799999999999999999999999999999999864211                                 0111899


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-  173 (483)
                      ||||+|++|.+++... .+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++..+.... 
T Consensus       122 ~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll---~~~~~ikL~DfG~a~~~~~~~~  197 (371)
T cd05622         122 MEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGM  197 (371)
T ss_pred             EcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE---CCCCCEEEEeCCceeEcCcCCc
Confidence            9999999999998754 68999999999999999999999999999999999999   567899999999998764332 


Q ss_pred             -eecccccCCcccCccccCCCC----CCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          174 -VYEEVVGTPLYMAPELLGPCK----YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       174 -~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                       .....+||+.|+|||++.+..    ++.++||||+||++|+|++|..||.+.+.......+......+..+..+.++..
T Consensus       198 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  277 (371)
T cd05622         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE  277 (371)
T ss_pred             ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHH
Confidence             123467999999999986532    788999999999999999999999998888888888776544444444578999


Q ss_pred             HHHHHHHhCccCCCC--CCCHHHHHcCCcCCC
Q 048594          249 AKDLIRRMLIRDPNN--QITVAQILKHPWLNY  278 (483)
Q Consensus       249 ~~~li~~~L~~dP~~--R~t~~e~L~h~~~~~  278 (483)
                      ++++|.+||..+|.+  |++++++++||||..
T Consensus       278 ~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~  309 (371)
T cd05622         278 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKN  309 (371)
T ss_pred             HHHHHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence            999999999844443  789999999999973

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.7e-40  Score=325.96  Aligned_cols=215  Identities=28%  Similarity=0.514  Sum_probs=186.4

Q ss_pred             ecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------------CCcCeEEEeccCC
Q 048594           57 LCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------------SDEGYLKREHCDG  100 (483)
Q Consensus        57 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------------~~~~~lv~E~~~g  100 (483)
                      ||+|+||+||+|+++.+|+.||||++.+...                                    ....|+|||||.|
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            7999999999999999999999999864210                                    1112999999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~  179 (483)
                      ++|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||+   +.++.++|+|||++.... ........+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  157 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL---DATGHIALCDFGLSKANLTDNKTTNTFC  157 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence            9999999988899999999999999999999999999999999999999   667889999999987532 222334567


Q ss_pred             cCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCc
Q 048594          180 GTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI  258 (483)
Q Consensus       180 gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  258 (483)
                      ||+.|+|||++.+. .++.++||||+||++|+|++|..||.+.........+..+...++.   ..+++++++||.+||.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~li~~~L~  234 (330)
T cd05586         158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK---NVLSDEGRQFVKGLLN  234 (330)
T ss_pred             CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC---ccCCHHHHHHHHHHcC
Confidence            99999999998654 4789999999999999999999999998888888888776655543   3578999999999999


Q ss_pred             cCCCCCC----CHHHHHcCCcCC
Q 048594          259 RDPNNQI----TVAQILKHPWLN  277 (483)
Q Consensus       259 ~dP~~R~----t~~e~L~h~~~~  277 (483)
                      +||.+||    ++.++++||||.
T Consensus       235 ~~P~~R~~~~~~~~~ll~h~~~~  257 (330)
T cd05586         235 RNPQHRLGAHRDAVELKEHPFFA  257 (330)
T ss_pred             CCHHHCCCCCCCHHHHhcCcccc
Confidence            9999998    799999999997

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.5e-39  Score=312.70  Aligned_cols=225  Identities=27%  Similarity=0.456  Sum_probs=188.3

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEEec
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKREH   97 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~E~   97 (483)
                      |++.+.||+|+||+||++.+..+++.||+|.+......                                 +..|+||||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            88999999999999999999999999999998653210                                 111999999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      |.|++|.+++...  .++++..+..++.||+.||.|||+++++||||||+||++   +.++.++|+|||++.........
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~~  158 (285)
T cd05605          82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGETI  158 (285)
T ss_pred             cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE---CCCCCEEEeeCCCceecCCCCcc
Confidence            9999999888653  469999999999999999999999999999999999999   66788999999999876544444


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....|++.|+|||++.+..++.++|+||+||++|+|++|..||.+.........+............+.++..+.+||.+
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  238 (285)
T cd05605         159 RGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQ  238 (285)
T ss_pred             ccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHH
Confidence            45678999999999988889999999999999999999999998766544433333222222222234688999999999


Q ss_pred             hCccCCCCCC-----CHHHHHcCCcCCC
Q 048594          256 MLIRDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       256 ~L~~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      ||..||.+||     +++++++||||..
T Consensus       239 ~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         239 LLTKDPGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             HccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence            9999999999     8999999999983

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-41  Score=326.03  Aligned_cols=229  Identities=33%  Similarity=0.540  Sum_probs=206.9

Q ss_pred             ccccceEE--eeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------C
Q 048594           46 DIKLHFTI--AEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------G   91 (483)
Q Consensus        46 ~i~~~y~~--~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~   91 (483)
                      +|..-|.+  .++||+|.||+||-|+|+++|+.||||+|.+-.....                                .
T Consensus       559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~erv  638 (888)
T KOG4236|consen  559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERV  638 (888)
T ss_pred             hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceE
Confidence            45556666  5789999999999999999999999999988653211                                1


Q ss_pred             eEEEeccCCCChHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           92 YLKREHCDGGTLVDRIS--DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~--~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ++|||-+.| +.++.|.  +.+++++.....++.||+.||+|||-+||+|+||||+|||+.+.+.-..+||||||+|+++
T Consensus       639 FVVMEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI  717 (888)
T KOG4236|consen  639 FVVMEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARII  717 (888)
T ss_pred             EEEehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeec
Confidence            999999987 7777664  4589999999999999999999999999999999999999988778889999999999999


Q ss_pred             cCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          170 EEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      .+.......+|||.|+|||++....|+..-|+||+|||+|--|+|..||..  .++.-+.|.+..+-+++.+|..+++++
T Consensus       718 gEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQIQNAaFMyPp~PW~eis~~A  795 (888)
T KOG4236|consen  718 GEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQIQNAAFMYPPNPWSEISPEA  795 (888)
T ss_pred             chhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccchhHHhhccccccCCCchhhcCHHH
Confidence            877777788999999999999999999999999999999999999999954  356677899999999999999999999


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+||..+|+...++|+|+++.|.|||++
T Consensus       796 idlIn~LLqVkm~kRysvdk~lsh~Wlq  823 (888)
T KOG4236|consen  796 IDLINNLLQVKMRKRYSVDKSLSHPWLQ  823 (888)
T ss_pred             HHHHHHHHHHHHHHhcchHhhccchhhh
Confidence            9999999999999999999999999997

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=4.7e-39  Score=319.68  Aligned_cols=216  Identities=26%  Similarity=0.468  Sum_probs=181.5

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------------cCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------------EGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~lv~E~~~g  100 (483)
                      +.||+|+||.||+|.++.+++.+|+|++.+.....                                  ..|+|||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            46999999999999999999999999997642110                                  11999999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~  179 (483)
                      ++|..++...+++++..+..++.||+.||.|||+++|+||||||+||++   +.++.+||+|||++.... ........+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFC  157 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCCCCcccccc
Confidence            9999999888899999999999999999999999999999999999999   677899999999987532 222334567


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCC---------ChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE---------SLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      ||+.|+|||++.+..++.++|+||+||++|+|++|..||...         ........+......++    ..++..+.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~  233 (329)
T cd05618         158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAA  233 (329)
T ss_pred             CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC----CCCCHHHH
Confidence            999999999999888999999999999999999999999521         11223344444444333    36789999


Q ss_pred             HHHHHhCccCCCCCCC------HHHHHcCCcCC
Q 048594          251 DLIRRMLIRDPNNQIT------VAQILKHPWLN  277 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t------~~e~L~h~~~~  277 (483)
                      ++|.+||+.||.+|||      ++++++||||+
T Consensus       234 ~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~  266 (329)
T cd05618         234 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR  266 (329)
T ss_pred             HHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCC
Confidence            9999999999999998      58999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.3e-38  Score=321.00  Aligned_cols=227  Identities=26%  Similarity=0.407  Sum_probs=186.6

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------   88 (483)
                      -.+.++|.+.+.||+|+||.||+|.++.+++.+|||.+......                                    
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~   99 (364)
T cd07875          20 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE   99 (364)
T ss_pred             hchhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence            34667999999999999999999999999999999998653110                                    


Q ss_pred             --CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           89 --DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        89 --~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                        ...|+||||+.+ +|.+.+..  .+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++
T Consensus       100 ~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a  173 (364)
T cd07875         100 EFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA  173 (364)
T ss_pred             ccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE---CCCCcEEEEeCCCc
Confidence              012899999976 68777753  58899999999999999999999999999999999999   56788999999999


Q ss_pred             eeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC----------
Q 048594          167 FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID----------  236 (483)
Q Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~----------  236 (483)
                      .............||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+......          
T Consensus       174 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (364)
T cd07875         174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ  253 (364)
T ss_pred             cccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhh
Confidence            8765544445567899999999999888999999999999999999999999887766655554431110          


Q ss_pred             ------------CC----------------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          237 ------------FK----------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       237 ------------~~----------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                  +.                .......+..+++||.+||+.||.+|||+.++|+||||.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~  322 (364)
T cd07875         254 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN  322 (364)
T ss_pred             HHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence                        00                000112356789999999999999999999999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=7.8e-39  Score=333.86  Aligned_cols=225  Identities=28%  Similarity=0.464  Sum_probs=193.7

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------------
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------------   89 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------------   89 (483)
                      ..++|.+.+.||+|+||+||+|.+..+|+.||||++.......                                     
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~  109 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE  109 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence            3468999999999999999999999999999999986532100                                     


Q ss_pred             ---cCeEEEeccCCCChHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEee
Q 048594           90 ---EGYLKREHCDGGTLVDRISDR----ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD  162 (483)
Q Consensus        90 ---~~~lv~E~~~g~~L~~~l~~~----~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~D  162 (483)
                         ..++||||+.+|+|.+++...    ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|
T Consensus       110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl---~~~~~vkL~D  186 (496)
T PTZ00283        110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL---CSNGLVKLGD  186 (496)
T ss_pred             cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---eCCCCEEEEe
Confidence               127999999999999998653    469999999999999999999999999999999999999   5677899999


Q ss_pred             cccceeccCC---ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC
Q 048594          163 FGLAFFFEEG---KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS  239 (483)
Q Consensus       163 fg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (483)
                      ||+++.....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+..+....  
T Consensus       187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~--  264 (496)
T PTZ00283        187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP--  264 (496)
T ss_pred             cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC--
Confidence            9998765422   12234679999999999998889999999999999999999999999888777777776654432  


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                       ..+.+++++.++|.+||..+|.+|||+.++++|||++
T Consensus       265 -~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~  301 (496)
T PTZ00283        265 -LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICK  301 (496)
T ss_pred             -CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHH
Confidence             2256889999999999999999999999999999987

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.5e-38  Score=320.00  Aligned_cols=227  Identities=26%  Similarity=0.438  Sum_probs=183.5

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------   88 (483)
                      -.+.++|.+.+.||+|+||.||+|.++.+|..+|+|.+......                                    
T Consensus        17 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   96 (359)
T cd07876          17 FTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE   96 (359)
T ss_pred             hhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc
Confidence            35678999999999999999999999999999999998643100                                    


Q ss_pred             --CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           89 --DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        89 --~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                        ...|+||||+.+ +|.+.+.  ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++
T Consensus        97 ~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~---~~~~~~kl~Dfg~a  170 (359)
T cd07876          97 EFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA  170 (359)
T ss_pred             ccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEecCCCc
Confidence              012899999976 5777664  358899999999999999999999999999999999999   66789999999999


Q ss_pred             eeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcc-------------
Q 048594          167 FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR-------------  233 (483)
Q Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~-------------  233 (483)
                      .............||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...             
T Consensus       171 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (359)
T cd07876         171 RTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQ  250 (359)
T ss_pred             cccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHH
Confidence            7654443344567899999999999888999999999999999999999999877654433222211             


Q ss_pred             ---------ccCCCCC----------------CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          234 ---------EIDFKSD----------------PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       234 ---------~~~~~~~----------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                               ...++..                .....++++++||.+||+.||++|||+.|+|.||||.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~  319 (359)
T cd07876         251 PTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT  319 (359)
T ss_pred             HHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhh
Confidence                     1111000                0012357899999999999999999999999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=3.3e-39  Score=320.28  Aligned_cols=216  Identities=27%  Similarity=0.489  Sum_probs=188.1

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~lv~E~~~g  100 (483)
                      +.||+|+||+||+|+++.+++.||+|++.+...                                  .+..|+|||||.|
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            469999999999999999999999999865320                                  0111999999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~  179 (483)
                      ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... ........+
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili---~~~~~~kl~DfG~a~~~~~~~~~~~~~~  157 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNGTTSTFC  157 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEEccCCCCcccccCCCCccccc
Confidence            9999999988889999999999999999999999999999999999999   567789999999987542 222334567


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCcc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR  259 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  259 (483)
                      ||+.|+|||++.+..++.++||||+||++|+|++|.+||.+.+.......+......+    .+.++..+.++|.+||++
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~~  233 (325)
T cd05602         158 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL----KPNITNSARHLLEGLLQK  233 (325)
T ss_pred             CCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC----CCCCCHHHHHHHHHHccc
Confidence            9999999999998889999999999999999999999999988888888877665443    247899999999999999


Q ss_pred             CCCCCCCHH----HHHcCCcCC
Q 048594          260 DPNNQITVA----QILKHPWLN  277 (483)
Q Consensus       260 dP~~R~t~~----e~L~h~~~~  277 (483)
                      +|.+|+++.    ++++|+||.
T Consensus       234 ~p~~R~~~~~~~~~i~~~~~~~  255 (325)
T cd05602         234 DRTKRLGAKDDFMEIKNHIFFS  255 (325)
T ss_pred             CHHHCCCCCCCHHHHhcCcccC
Confidence            999999876    899999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=7.6e-39  Score=317.44  Aligned_cols=217  Identities=33%  Similarity=0.576  Sum_probs=188.0

Q ss_pred             eeeecccCceeEEEEEEC---CCCCEEEEEEeccCCC----------------------------------CCcCeEEEe
Q 048594           54 AEELCRGESGRIYLCTEN---STGLQFACKSISKTSK----------------------------------SDEGYLKRE   96 (483)
Q Consensus        54 ~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~----------------------------------~~~~~lv~E   96 (483)
                      ++.||+|+||.||+|.+.   .+++.||+|++.+...                                  ....|+|||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence            367999999999999864   5789999999875321                                  011199999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-Ccee
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GKVY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~~~~  175 (483)
                      |+.|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... ....
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~  157 (323)
T cd05584          81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTVT  157 (323)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCCCcc
Confidence            99999999999988899999999999999999999999999999999999999   6778999999999875432 2223


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+..+...++    +.+++.+.+||.+
T Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~  233 (323)
T cd05584         158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP----PYLTPEARDLLKK  233 (323)
T ss_pred             cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHH
Confidence            345799999999999888889999999999999999999999999888888888877655443    4678999999999


Q ss_pred             hCccCCCCCC-----CHHHHHcCCcCC
Q 048594          256 MLIRDPNNQI-----TVAQILKHPWLN  277 (483)
Q Consensus       256 ~L~~dP~~R~-----t~~e~L~h~~~~  277 (483)
                      ||+++|.+||     ++.+++.||||.
T Consensus       234 ~l~~~p~~R~~~~~~~~~~l~~h~~~~  260 (323)
T cd05584         234 LLKRNPSSRLGAGPGDAAEVQSHPFFR  260 (323)
T ss_pred             HcccCHhHcCCCCCCCHHHHhcCCCcC
Confidence            9999999999     899999999997

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=3e-39  Score=320.60  Aligned_cols=216  Identities=26%  Similarity=0.489  Sum_probs=188.1

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~lv~E~~~g  100 (483)
                      +.||+|+||+||+|.++.+|+.+|+|++.+...                                  .+..|+|||||.|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            469999999999999999999999999865321                                  0111999999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~  179 (483)
                      ++|..++....++++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... ........+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL---DSQGHVVLTDFGLCKEGIAQSDTTTTFC  157 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEeecCCcccCCCCCCCccccc
Confidence            9999999888899999999999999999999999999999999999999   677899999999987532 222334567


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCcc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR  259 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  259 (483)
                      ||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+........    +..+..+.++|.+||..
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~ll~~  233 (325)
T cd05604         158 GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEELLEK  233 (325)
T ss_pred             CChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC----CCCCHHHHHHHHHHhcc
Confidence            99999999999988899999999999999999999999999888888888777654433    46789999999999999


Q ss_pred             CCCCCCCH----HHHHcCCcCC
Q 048594          260 DPNNQITV----AQILKHPWLN  277 (483)
Q Consensus       260 dP~~R~t~----~e~L~h~~~~  277 (483)
                      +|.+||++    .+++.||||.
T Consensus       234 ~p~~R~~~~~~~~~i~~h~~f~  255 (325)
T cd05604         234 DRQRRLGAKEDFLEIQEHPFFE  255 (325)
T ss_pred             CHHhcCCCCCCHHHHhcCCCcC
Confidence            99999977    5999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-40  Score=317.22  Aligned_cols=228  Identities=29%  Similarity=0.450  Sum_probs=198.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      +.|..-++||+|+||.||-|..+.||+.||+|.+.+...                                 .+..++|+
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            578889999999999999999999999999999876531                                 22239999


Q ss_pred             eccCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           96 EHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ..|+||+|.-.|.+.+  .+++..++.++.+|+.||++||+.+||+|||||+|||+   ++.|+|+|+|+|+|..+..+.
T Consensus       265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAvei~~g~  341 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAVEIPEGK  341 (591)
T ss_pred             EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceEEecCCCC
Confidence            9999999999998765  79999999999999999999999999999999999999   788999999999999999888


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      .....+||.+|||||++....|+..+|+|||||++|+|+.|+.||.......-.+.+.+....-+......+|++++++.
T Consensus       342 ~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc  421 (591)
T KOG0986|consen  342 PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLC  421 (591)
T ss_pred             ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHH
Confidence            88888999999999999998999999999999999999999999977654433333333333323333357899999999


Q ss_pred             HHhCccCCCCCC-----CHHHHHcCCcCCCC
Q 048594          254 RRMLIRDPNNQI-----TVAQILKHPWLNYE  279 (483)
Q Consensus       254 ~~~L~~dP~~R~-----t~~e~L~h~~~~~~  279 (483)
                      ..+|++||.+|.     +++++.+||||+..
T Consensus       422 ~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l  452 (591)
T KOG0986|consen  422 EGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL  452 (591)
T ss_pred             HHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence            999999999998     46799999999843

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.5e-38  Score=316.30  Aligned_cols=226  Identities=26%  Similarity=0.397  Sum_probs=187.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeEEEe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYLKRE   96 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E   96 (483)
                      .++|++++.||+|+||.||+|.++.+|..+|+|++......                               ...|+|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            47899999999999999999999999999999998754210                               11199999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      |++|++|.+++.....+++..+..++.||+.||.|||++ +|+||||||+||++   +.++.++|+|||++...... ..
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~-~~  159 (331)
T cd06649          84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS-MA  159 (331)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE---cCCCcEEEccCccccccccc-cc
Confidence            999999999999888899999999999999999999986 69999999999999   56778999999998765432 23


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc--------------------
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI--------------------  235 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~--------------------  235 (483)
                      ....|++.|+|||++.+..++.++|+||+||++|+|++|+.||......+....+.....                    
T Consensus       160 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (331)
T cd06649         160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRP  239 (331)
T ss_pred             ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccccc
Confidence            345789999999999988899999999999999999999999976554433222211000                    


Q ss_pred             ------------------------CCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          236 ------------------------DFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       236 ------------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                              ..+..+...+++++++||.+||++||++|||+.++++||||+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~  305 (331)
T cd06649         240 VSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIK  305 (331)
T ss_pred             ccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHh
Confidence                                    000111124678999999999999999999999999999998

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=7.9e-39  Score=317.83  Aligned_cols=217  Identities=25%  Similarity=0.439  Sum_probs=181.5

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~lv~E~~~g  100 (483)
                      +.||+|+||.||+|.++.+++.+|+|++.+....                                  ...|+|||||+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999999999999999999764211                                  011899999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~  179 (483)
                      ++|..++...+.+++..+..++.||+.||+|||++||+||||||+|||+   +.++.+||+|||++.... ........+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL---DADGHIKLTDYGMCKEGLGPGDTTSTFC  157 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---eCCCCEEEeccccceeccCCCCceeccc
Confidence            9999999888899999999999999999999999999999999999999   567789999999987532 233344567


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC-------hHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES-------LYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ||+.|+|||++.+..++.++|+|||||++|+|++|..||....       .......+......++    ..++..+.++
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~l  233 (327)
T cd05617         158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP----RFLSVKASHV  233 (327)
T ss_pred             CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence            9999999999988889999999999999999999999995421       1223334444333322    3578999999


Q ss_pred             HHHhCccCCCCCCC------HHHHHcCCcCCC
Q 048594          253 IRRMLIRDPNNQIT------VAQILKHPWLNY  278 (483)
Q Consensus       253 i~~~L~~dP~~R~t------~~e~L~h~~~~~  278 (483)
                      |.+||+.||.+|++      +.+++.||||..
T Consensus       234 i~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~  265 (327)
T cd05617         234 LKGFLNKDPKERLGCQPQTGFSDIKSHTFFRS  265 (327)
T ss_pred             HHHHhccCHHHcCCCCCCCCHHHHHcCCCCCC
Confidence            99999999999998      569999999983

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-38  Score=315.99  Aligned_cols=226  Identities=32%  Similarity=0.548  Sum_probs=187.3

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|++.+.||+|+||+||++.++.+++.||+|++.+...                                 ....|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            479999999999999999999999999999999864210                                 01129999


Q ss_pred             eccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           96 EHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      |||.|++|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||++..+.....
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~  157 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL---DKNGHIRLADFGSCLRLLADGT  157 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE---CCCCCEEEEECCceeecCCCCC
Confidence            99999999999976 4679999999999999999999999999999999999999   6778899999999876543322


Q ss_pred             e--cccccCCcccCccccCC-----CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC-CCCCCCC
Q 048594          175 Y--EEVVGTPLYMAPELLGP-----CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS-DPWPTIS  246 (483)
Q Consensus       175 ~--~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~  246 (483)
                      .  ....||+.|+|||++..     ..++.++||||+||++|+|++|..||.+....+....+......+.. ...+.++
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  237 (331)
T cd05597         158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVS  237 (331)
T ss_pred             ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCC
Confidence            1  23468999999999863     34678999999999999999999999988877777777654332221 2234589


Q ss_pred             HHHHHHHHHhCccCCCC--CCCHHHHHcCCcCC
Q 048594          247 SSAKDLIRRMLIRDPNN--QITVAQILKHPWLN  277 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~--R~t~~e~L~h~~~~  277 (483)
                      ..+++||.+||..++.+  |+++.++++||||.
T Consensus       238 ~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~  270 (331)
T cd05597         238 EEAKDLIRRLICSPETRLGRNGLQDFKDHPFFE  270 (331)
T ss_pred             HHHHHHHHHHccCcccccCCCCHHHHhcCCCCC
Confidence            99999999998765444  88999999999997

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=6e-39  Score=317.90  Aligned_cols=216  Identities=27%  Similarity=0.467  Sum_probs=186.9

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~lv~E~~~g  100 (483)
                      ++||+|+||.||+|.++.+|+.||+|++.+...                                  .+..|+|||||+|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999999999999999999865321                                  0011999999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCceecccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~  179 (483)
                      ++|...+.....+++..+..++.||+.||.|||+++|+||||||+||++   +.++.+||+|||++.... ........+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEETTSTFC  157 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEccCCCCccCCCCCCcccccc
Confidence            9999999888889999999999999999999999999999999999999   667899999999987532 222334467


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCcc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR  259 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  259 (483)
                      ||+.|+|||.+.+..++.++|+|||||++|+|++|..||.+.+.......+......++    +..+..+.++|.+||++
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~  233 (321)
T cd05603         158 GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGLLHK  233 (321)
T ss_pred             CCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHccC
Confidence            89999999999888899999999999999999999999999887777787776654443    35688999999999999


Q ss_pred             CCCCCCCH----HHHHcCCcCC
Q 048594          260 DPNNQITV----AQILKHPWLN  277 (483)
Q Consensus       260 dP~~R~t~----~e~L~h~~~~  277 (483)
                      +|.+||++    .++++|+||.
T Consensus       234 ~p~~R~~~~~~~~~~~~~~~~~  255 (321)
T cd05603         234 DQRRRLGAKADFLEIKNHVFFS  255 (321)
T ss_pred             CHhhcCCCCCCHHHHhCCCCcC
Confidence            99999976    4999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=9.6e-39  Score=310.20  Aligned_cols=219  Identities=26%  Similarity=0.458  Sum_probs=178.7

Q ss_pred             ecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEEeccCCCCh
Q 048594           57 LCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKREHCDGGTL  103 (483)
Q Consensus        57 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~E~~~g~~L  103 (483)
                      ||+|+||+||+|.++.+|+.+|+|.+.+....                                 ...|+|||||+|++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            79999999999999999999999998653211                                 011899999999999


Q ss_pred             HHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-eeccc
Q 048594          104 VDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYEEV  178 (483)
Q Consensus       104 ~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~~~~  178 (483)
                      ...+..    ...+++..+..++.||+.||.|||+++|+||||||+||++   +.++.++|+|||.+..+.... .....
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTKGY  157 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCccceecCCCCcccccc
Confidence            887743    3569999999999999999999999999999999999999   567889999999997664432 22345


Q ss_pred             ccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCc
Q 048594          179 VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI  258 (483)
Q Consensus       179 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  258 (483)
                      .||+.|+|||.+.+..++.++|+||+||++|+|++|..||...........+.......+....+.+++.+.+++.+||+
T Consensus       158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  237 (280)
T cd05608         158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLA  237 (280)
T ss_pred             CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhc
Confidence            78999999999998889999999999999999999999997654322222222222221222224688999999999999


Q ss_pred             cCCCCCC-----CHHHHHcCCcCCC
Q 048594          259 RDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       259 ~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      .||.+||     |++++++||||+.
T Consensus       238 ~~P~~R~~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         238 KDPEKRLGFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             CCHHHhcCCCCCCHHHHhcChhhhc
Confidence            9999999     8899999999983

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=1.4e-38  Score=319.65  Aligned_cols=226  Identities=26%  Similarity=0.419  Sum_probs=184.4

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------------   88 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------------   88 (483)
                      .+.++|.+.+.||+|+||.||+|.+..+++.+|||.+......                                     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            4667999999999999999999999999999999998653210                                     


Q ss_pred             -CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           89 -DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                       ...|+|||||.+ +|.+.+..  .+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.
T Consensus        94 ~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill---~~~~~~kl~Dfg~~~  167 (355)
T cd07874          94 FQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR  167 (355)
T ss_pred             cceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---CCCCCEEEeeCcccc
Confidence             012899999976 67777653  58899999999999999999999999999999999999   567889999999998


Q ss_pred             eccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc-------------
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE-------------  234 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~-------------  234 (483)
                      ............||+.|+|||++.+..++.++|+||+||++|+|++|..||.+.+....+..+....             
T Consensus       168 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (355)
T cd07874         168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP  247 (355)
T ss_pred             cCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcH
Confidence            7655444455678999999999988889999999999999999999999998876544433322110             


Q ss_pred             ---------cCC-----C-----------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          235 ---------IDF-----K-----------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       235 ---------~~~-----~-----------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                               ..+     +           .......+.++++||.+||+.||++|||+.|+|+||||.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~  315 (355)
T cd07874         248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYIN  315 (355)
T ss_pred             HHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchh
Confidence                     000     0           001122456789999999999999999999999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1.7e-38  Score=316.18  Aligned_cols=227  Identities=32%  Similarity=0.526  Sum_probs=189.6

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCC---------------------------------CCCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS---------------------------------KSDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~---------------------------------~~~~~~lv~   95 (483)
                      ++|.+.+.||+|+||.||++.++.+++.+|+|++.+..                                 .....|+||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            47999999999999999999999999999999986421                                 011128999


Q ss_pred             eccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-
Q 048594           96 EHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-  173 (483)
                      |||.||+|.+++.+ ...+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.++|+|||++..+.... 
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili---~~~~~~kL~DfG~a~~~~~~~~  157 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGT  157 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEeecchheecccCCc
Confidence            99999999999976 4679999999999999999999999999999999999999   667889999999987653322 


Q ss_pred             -eecccccCCcccCccccC-----CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC-CCCCCCC
Q 048594          174 -VYEEVVGTPLYMAPELLG-----PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS-DPWPTIS  246 (483)
Q Consensus       174 -~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~  246 (483)
                       .....+||+.|+|||++.     ...++.++||||+||++|+|++|..||.+.+.......+......+.. .....++
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s  237 (332)
T cd05623         158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVS  237 (332)
T ss_pred             ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCC
Confidence             123357999999999985     335788999999999999999999999998888888888765443322 1234679


Q ss_pred             HHHHHHHHHhCccCCCC--CCCHHHHHcCCcCCC
Q 048594          247 SSAKDLIRRMLIRDPNN--QITVAQILKHPWLNY  278 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~--R~t~~e~L~h~~~~~  278 (483)
                      +++++||.+||..+|.+  |++++++++||||..
T Consensus       238 ~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~  271 (332)
T cd05623         238 EDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG  271 (332)
T ss_pred             HHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence            99999999999765544  789999999999983

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.5e-38  Score=316.32  Aligned_cols=226  Identities=32%  Similarity=0.521  Sum_probs=189.9

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|.+.+.||+|+||+||++.++.+++.||+|++.+...                                 .+..|+||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            479999999999999999999999999999999865210                                 11128999


Q ss_pred             eccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           96 EHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      |||.||+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||++........
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~~  157 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL---DMNGHIRLADFGSCLKMNQDGT  157 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE---cCCCCEEEEeccceeeccCCCc
Confidence            99999999999987 4689999999999999999999999999999999999999   6678899999999977643322


Q ss_pred             --ecccccCCcccCccccCC-----CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC-CCCCCCC
Q 048594          175 --YEEVVGTPLYMAPELLGP-----CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS-DPWPTIS  246 (483)
Q Consensus       175 --~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~  246 (483)
                        ....+||+.|+|||++.+     ..++.++|+||+||++|+|++|..||.+.+.......+......++. .....++
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~  237 (331)
T cd05624         158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVS  237 (331)
T ss_pred             eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCC
Confidence              123579999999999865     45788999999999999999999999988877777777765433322 2234678


Q ss_pred             HHHHHHHHHhCccCCCC--CCCHHHHHcCCcCC
Q 048594          247 SSAKDLIRRMLIRDPNN--QITVAQILKHPWLN  277 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~--R~t~~e~L~h~~~~  277 (483)
                      .+++++|.+||..++.+  |++++++++||||.
T Consensus       238 ~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~  270 (331)
T cd05624         238 EEAKDLIQRLICSRERRLGQNGIEDFKKHAFFE  270 (331)
T ss_pred             HHHHHHHHHHccCchhhcCCCCHHHHhcCCCcC
Confidence            99999999999876654  57999999999997

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.4e-39  Score=318.29  Aligned_cols=223  Identities=27%  Similarity=0.455  Sum_probs=201.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc---------------------------------CeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE---------------------------------GYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~---------------------------------~~lv~   95 (483)
                      +.|..++.+|+|+||.+++++++..++.|++|.+......+.                                 .+|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            579999999999999999999999999999999976542111                                 29999


Q ss_pred             eccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           96 EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      +||+||++.+.|...  ..++|+.+..|+.||+.|+.|||+++|+|||||+.||++   .....|+|+|||+|+.+.+..
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl---tk~~~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL---TKDKKVKLGDFGLAKILNPED  160 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc---cccCceeecchhhhhhcCCch
Confidence            999999999999765  469999999999999999999999999999999999999   556678999999999988765


Q ss_pred             -eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          174 -VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       174 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                       ...+..|||.|++||++.+.+|+.++|||||||++|||++-+++|.+.+.......|....+...+   ..++.+++.+
T Consensus       161 ~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp---~~ys~el~~l  237 (426)
T KOG0589|consen  161 SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP---SMYSSELRSL  237 (426)
T ss_pred             hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC---ccccHHHHHH
Confidence             667789999999999999999999999999999999999999999999999999999888743222   4678999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      |+.||..+|..||++.++|.+|.+.
T Consensus       238 v~~~l~~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  238 VKSMLRKNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             HHHHhhcCCccCCCHHHHhhChhhh
Confidence            9999999999999999999999886

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.7e-38  Score=320.83  Aligned_cols=226  Identities=25%  Similarity=0.370  Sum_probs=181.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------CCcCeEEEeccCCCCh
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------SDEGYLKREHCDGGTL  103 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------~~~~~lv~E~~~g~~L  103 (483)
                      ..+|.+++.||+|+||.||+|.++.+++.||+|.......                        ....|+|+|++. ++|
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L  169 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDL  169 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCH
Confidence            3589999999999999999999999999999998654321                        111289999996 589


Q ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC--ceecccccC
Q 048594          104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG--KVYEEVVGT  181 (483)
Q Consensus       104 ~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~--~~~~~~~gt  181 (483)
                      .+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++......  ......+||
T Consensus       170 ~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll---~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt  246 (391)
T PHA03212        170 YCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI---NHPGDVCLGDFGAACFPVDINANKYYGWAGT  246 (391)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE---cCCCCEEEEeCCcccccccccccccccccCc
Confidence            9999888889999999999999999999999999999999999999   56788999999998653221  223345799


Q ss_pred             CcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC-------hHHHHHHHHccc--------------------
Q 048594          182 PLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES-------LYGTLTAIMSRE--------------------  234 (483)
Q Consensus       182 ~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~-------~~~~~~~i~~~~--------------------  234 (483)
                      +.|+|||++.+..++.++||||+||++|+|++|..||....       ....+..+....                    
T Consensus       247 ~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~  326 (391)
T PHA03212        247 IATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYI  326 (391)
T ss_pred             cCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHH
Confidence            99999999988889999999999999999999998876432       111222221100                    


Q ss_pred             ------cCC--CCCCC---CCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          235 ------IDF--KSDPW---PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       235 ------~~~--~~~~~---~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                            ...  ..+.|   ..++.++.+||.+||++||.+|||+.|+|+||||.
T Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~  380 (391)
T PHA03212        327 GLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQ  380 (391)
T ss_pred             HHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhc
Confidence                  000  00011   13467899999999999999999999999999997

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=5e-39  Score=307.80  Aligned_cols=223  Identities=35%  Similarity=0.642  Sum_probs=187.2

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEecc
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKREHC   98 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E~~   98 (483)
                      |++.+.||+|+||+||+|.++.+++.+|+|++.......                                ..|+|||||
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            889999999999999999999999999999998765211                                118999999


Q ss_pred             CCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec-cCCceecc
Q 048594           99 DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEE  177 (483)
Q Consensus        99 ~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~-~~~~~~~~  177 (483)
                      .+++|.+++.....+++..+..++.||+.||.+||+++++|+||||+||++   +.++.++|+|||.+... ........
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~---~~~~~~~l~Dfg~~~~~~~~~~~~~~  157 (260)
T PF00069_consen   81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL---DENGEVKLIDFGSSVKLSENNENFNP  157 (260)
T ss_dssp             TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE---STTSEEEESSGTTTEESTSTTSEBSS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccc
Confidence            999999999977889999999999999999999999999999999999999   67889999999999863 33344456


Q ss_pred             cccCCcccCccccC-CCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh---HHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          178 VVGTPLYMAPELLG-PCKYGKEIDIWSAGLILYNLLSGAQPFWAESL---YGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       178 ~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ..+++.|+|||++. +..++.++|+||||+++++|++|..||.....   ......................+..+.++|
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  237 (260)
T PF00069_consen  158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLI  237 (260)
T ss_dssp             SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHH
Confidence            67899999999998 66789999999999999999999999988732   333333333222222211122348999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .+||+.||++|||+.++++||||
T Consensus       238 ~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  238 KKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             HHHccCChhHCcCHHHHhcCCCC
Confidence            99999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=3e-38  Score=307.57  Aligned_cols=221  Identities=28%  Similarity=0.486  Sum_probs=183.8

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEEec
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKREH   97 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~E~   97 (483)
                      |++.+.||+|+||.||+|.++.+++.||+|.+.+....                                 +..|+||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            77889999999999999999999999999998654211                                 011899999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      +.|++|.+++...  ..+++..+..++.|++.||.|||+.+|+||||||+||++   +..+.++|+|||++.........
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~~  158 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTI  158 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeccceeecCCCccc
Confidence            9999999988644  358999999999999999999999999999999999999   56778999999998776544444


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH---HHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY---GTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ....|++.|+|||.+.+..++.++|+||+|+++|+|++|..||......   .....+....   .......+++++++|
T Consensus       159 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l  235 (285)
T cd05630         159 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV---QEEYSEKFSPDARSL  235 (285)
T ss_pred             cCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh---hhhcCccCCHHHHHH
Confidence            4557899999999998888999999999999999999999999765432   2222221111   111234678999999


Q ss_pred             HHHhCccCCCCCCC-----HHHHHcCCcCC
Q 048594          253 IRRMLIRDPNNQIT-----VAQILKHPWLN  277 (483)
Q Consensus       253 i~~~L~~dP~~R~t-----~~e~L~h~~~~  277 (483)
                      |.+||+.||.+|||     ++++++||||+
T Consensus       236 i~~~l~~~p~~R~s~~~~~~~~~~~h~~~~  265 (285)
T cd05630         236 CKMLLCKDPKERLGCQGGGAREVKEHPLFK  265 (285)
T ss_pred             HHHHhhcCHHHccCCCCCchHHHHcChhhh
Confidence            99999999999999     99999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=4.8e-38  Score=309.69  Aligned_cols=226  Identities=24%  Similarity=0.395  Sum_probs=183.9

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------CeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------GYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~~lv~E~   97 (483)
                      ++|.+.+.||+|+||+||+|.++.++..+|+|.+........                               .|+||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            579999999999999999999999999999999875432111                               1899999


Q ss_pred             cCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-cee
Q 048594           98 CDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~  175 (483)
                      +.+ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++   +..+.+||+|||++...... ...
T Consensus        86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~  161 (309)
T cd07872          86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPTKTY  161 (309)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECccccceecCCCcccc
Confidence            986 888888654 458999999999999999999999999999999999999   56788999999998764322 222


Q ss_pred             cccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc-------------------c
Q 048594          176 EEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE-------------------I  235 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~-------------------~  235 (483)
                      ....+++.|+|||.+.+ ..++.++|+||+||++|+|++|.+||.+.+..+....+....                   .
T Consensus       162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (309)
T cd07872         162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNY  241 (309)
T ss_pred             ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhh
Confidence            34567899999998865 357889999999999999999999998877655544443211                   0


Q ss_pred             CCCC-------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          236 DFKS-------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       236 ~~~~-------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      .++.       ...+.++++++++|.+||..||.+|||+.|+|+||||+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  291 (309)
T cd07872         242 NFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS  291 (309)
T ss_pred             hcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence            0010       112357889999999999999999999999999999984

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.1e-38  Score=315.64  Aligned_cols=217  Identities=31%  Similarity=0.532  Sum_probs=187.9

Q ss_pred             eeeecccCceeEEEEEE---CCCCCEEEEEEeccCCCC--------------------------------CcCeEEEecc
Q 048594           54 AEELCRGESGRIYLCTE---NSTGLQFACKSISKTSKS--------------------------------DEGYLKREHC   98 (483)
Q Consensus        54 ~~~lg~G~~g~V~~~~~---~~~~~~~avK~~~~~~~~--------------------------------~~~~lv~E~~   98 (483)
                      ++.||+|+||.||++.+   +.+|+.+|+|++.+....                                ...|+|||||
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   80 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL   80 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence            36799999999999986   467899999999753211                                0119999999


Q ss_pred             CCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ceecc
Q 048594           99 DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVYEE  177 (483)
Q Consensus        99 ~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~~~  177 (483)
                      .|++|.+++.....+++..+..++.||+.||.|||+++|+||||||+||++   +.++.++|+|||++...... .....
T Consensus        81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~~~~~~~  157 (318)
T cd05582          81 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYS  157 (318)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE---CCCCcEEEeeccCCcccCCCCCceec
Confidence            999999999888889999999999999999999999999999999999999   56778999999998765433 22334


Q ss_pred             cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhC
Q 048594          178 VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML  257 (483)
Q Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  257 (483)
                      ..|++.|+|||.+.+..++.++|+||+||++|+|++|..||.+.........+......++    +.+++.+.++|.+||
T Consensus       158 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~l  233 (318)
T cd05582         158 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQSLLRALF  233 (318)
T ss_pred             ccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHh
Confidence            6789999999999888889999999999999999999999998888888888776655443    357899999999999


Q ss_pred             ccCCCCCCC-----HHHHHcCCcCC
Q 048594          258 IRDPNNQIT-----VAQILKHPWLN  277 (483)
Q Consensus       258 ~~dP~~R~t-----~~e~L~h~~~~  277 (483)
                      ++||.+|||     +.+++.||||.
T Consensus       234 ~~~P~~R~~a~~~~~~~~~~~~~~~  258 (318)
T cd05582         234 KRNPANRLGAGPDGVEEIKRHPFFS  258 (318)
T ss_pred             hcCHhHcCCCCCCCHHHHhCCCCcC
Confidence            999999999     77899999997

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.1e-37  Score=303.55  Aligned_cols=224  Identities=27%  Similarity=0.471  Sum_probs=188.3

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEEec
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKREH   97 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~E~   97 (483)
                      |+..+.||.|+||+||+|.+..+++.+|+|.+.+....                                 +..|+|+||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            78889999999999999999999999999998653211                                 011899999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      +.+++|.+.+...  .++++..+..++.|++.||.|||+++|+||||||+||++   +.++.++|+|||++.........
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~  158 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGESI  158 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---CCCCCEEEecCCcceecCCCCcc
Confidence            9999999888653  469999999999999999999999999999999999999   56678999999998766544444


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....|++.|+|||.+.+..++.++|+||+|+++|+|++|..||.+.........+............+.++.++.+|+.+
T Consensus       159 ~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  238 (285)
T cd05632         159 RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKM  238 (285)
T ss_pred             cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHH
Confidence            45678999999999988889999999999999999999999998776654444443332222222335678999999999


Q ss_pred             hCccCCCCCCC-----HHHHHcCCcCC
Q 048594          256 MLIRDPNNQIT-----VAQILKHPWLN  277 (483)
Q Consensus       256 ~L~~dP~~R~t-----~~e~L~h~~~~  277 (483)
                      ||+.||.+|||     +.+++.|+||+
T Consensus       239 ~l~~~P~~R~~~~~~~~~~l~~~~~~~  265 (285)
T cd05632         239 LLTKDPKQRLGCQEEGAGEVKRHPFFR  265 (285)
T ss_pred             HccCCHhHcCCCcccChHHHHcChhhh
Confidence            99999999999     88999999998

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=8.6e-38  Score=312.46  Aligned_cols=229  Identities=26%  Similarity=0.433  Sum_probs=186.3

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------   88 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------   88 (483)
                      ....+.++|.+++.||+|+||+||+|.+..++..||||.+......                                  
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   88 (343)
T cd07878           9 TVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATS   88 (343)
T ss_pred             HHhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc
Confidence            3456778999999999999999999999999999999998653100                                  


Q ss_pred             ----CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           89 ----DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        89 ----~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                          ...|++++++ |++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||
T Consensus        89 ~~~~~~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg  163 (343)
T cd07878          89 IENFNEVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV---NEDCELRILDFG  163 (343)
T ss_pred             ccccCcEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE---CCCCCEEEcCCc
Confidence                1128899988 6688887754 579999999999999999999999999999999999999   567889999999


Q ss_pred             cceeccCCceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-------
Q 048594          165 LAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-------  236 (483)
Q Consensus       165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-------  236 (483)
                      ++......  .....||+.|+|||++.+ ..++.++||||+||++|+|++|..||.+......+..+......       
T Consensus       164 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  241 (343)
T cd07878         164 LARQADDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLK  241 (343)
T ss_pred             cceecCCC--cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            99876432  234578999999999876 46789999999999999999999999877655554444321100       


Q ss_pred             ----------------CCCC----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          237 ----------------FKSD----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       237 ----------------~~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                      .+..    .+...++.+.+||.+||..||.+|||+.|+|.||||..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~  303 (343)
T cd07878         242 KISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ  303 (343)
T ss_pred             hcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence                            0000    11245678899999999999999999999999999983

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.5e-37  Score=301.35  Aligned_cols=216  Identities=25%  Similarity=0.423  Sum_probs=178.7

Q ss_pred             ecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEEeccCCCCh
Q 048594           57 LCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKREHCDGGTL  103 (483)
Q Consensus        57 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~E~~~g~~L  103 (483)
                      ||+|+||.||++.++.+|+.||+|.+......                                 ...|+||||+.|++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            79999999999999999999999998643211                                 011899999999999


Q ss_pred             HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccccC
Q 048594          104 VDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT  181 (483)
Q Consensus       104 ~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt  181 (483)
                      .+.+...  ..+++..+..++.||+.||+|||+.|++||||||+||++   +.++.++|+|||.+.............|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~  157 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKTITQRAGT  157 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE---cCCCCEEEeeceeeeecCCCceeeccCCC
Confidence            9888654  358899999999999999999999999999999999999   66778999999999876655444456789


Q ss_pred             CcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh----HHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhC
Q 048594          182 PLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL----YGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML  257 (483)
Q Consensus       182 ~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  257 (483)
                      +.|+|||++.+..++.++|+||+||++|+|++|..||.....    ......+......+   ....++++++++|.+||
T Consensus       158 ~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~L  234 (277)
T cd05607         158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF---EHQNFTEESKDICRLFL  234 (277)
T ss_pred             CCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc---ccccCCHHHHHHHHHHh
Confidence            999999999888899999999999999999999999976433    22233333322222   22467899999999999


Q ss_pred             ccCCCCCCCH----HHHHcCCcCCC
Q 048594          258 IRDPNNQITV----AQILKHPWLNY  278 (483)
Q Consensus       258 ~~dP~~R~t~----~e~L~h~~~~~  278 (483)
                      ++||.+||++    ++++.||||+.
T Consensus       235 ~~~P~~R~~~~~~~~~~~~h~~f~~  259 (277)
T cd05607         235 AKKPEDRLGSREKNDDPRKHEFFKT  259 (277)
T ss_pred             ccCHhhCCCCccchhhhhcChhhcC
Confidence            9999999999    67889999973

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=6e-37  Score=293.14  Aligned_cols=221  Identities=25%  Similarity=0.477  Sum_probs=188.3

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCeEEEe
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGYLKRE   96 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~lv~E   96 (483)
                      .|++.+.||.|++|.||++.++.+++.+|+|.+.......                                 ..|+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4899999999999999999999999999999986532110                                 1189999


Q ss_pred             ccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-c
Q 048594           97 HCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-K  173 (483)
Q Consensus        97 ~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~  173 (483)
                      ||++++|.+++...  ..+++.++..++.+|+.||.+||++|++|+||+|+||++   +..+.++|+|||.+...... .
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~---~~~~~~~l~df~~~~~~~~~~~  157 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL---TRTNIIKVGDLGIARVLENQCD  157 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE---ecCCcEEEecccceEEecccCC
Confidence            99999999999763  468999999999999999999999999999999999999   56778999999998766432 2


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ......+++.|+|||++.+..++.++|+||+|+++++|++|..||...+.......+..+....   ....+++++.+||
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li  234 (257)
T cd08223         158 MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPP---MPKDYSPELGELI  234 (257)
T ss_pred             ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC---CccccCHHHHHHH
Confidence            2234568899999999988888999999999999999999999998877666666665544321   2246789999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .+||+.+|.+|||+.++++||||
T Consensus       235 ~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         235 ATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HHHhccCcccCCCHHHHhcCCCC
Confidence            99999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=2.8e-37  Score=297.86  Aligned_cols=223  Identities=26%  Similarity=0.429  Sum_probs=183.8

Q ss_pred             ccceEEeeee--cccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------cCeEEEeccC
Q 048594           48 KLHFTIAEEL--CRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------EGYLKREHCD   99 (483)
Q Consensus        48 ~~~y~~~~~l--g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------~~~lv~E~~~   99 (483)
                      .+.|.+.+.+  |+|+||.||++.++.++..+|+|.+.......                          ..|+||||++
T Consensus        13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~   92 (267)
T PHA03390         13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIK   92 (267)
T ss_pred             HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCC
Confidence            3566776665  99999999999999999999999987643111                          1199999999


Q ss_pred             CCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCC-cEEEeecccceeccCCceeccc
Q 048594          100 GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA-TLKATDFGLAFFFEEGKVYEEV  178 (483)
Q Consensus       100 g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~-~ikl~Dfg~a~~~~~~~~~~~~  178 (483)
                      |++|.+++....++++..+..++.||+.||.|||+.+++||||+|+||++.   ..+ .++|+|||.+......   ...
T Consensus        93 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~~l~dfg~~~~~~~~---~~~  166 (267)
T PHA03390         93 DGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYD---RAKDRIYLCDYGLCKIIGTP---SCY  166 (267)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEe---CCCCeEEEecCccceecCCC---ccC
Confidence            999999998888999999999999999999999999999999999999994   444 8999999998765433   234


Q ss_pred             ccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHH-HHHHHccccCCCCCCCCCCCHHHHHHHHHhC
Q 048594          179 VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGT-LTAIMSREIDFKSDPWPTISSSAKDLIRRML  257 (483)
Q Consensus       179 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  257 (483)
                      .+++.|+|||++.+..++.++|+||+|+++|+|++|..||........ ...+.... ......++.+++.+.+||.+||
T Consensus       167 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l  245 (267)
T PHA03390        167 DGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNANDFVQSML  245 (267)
T ss_pred             CCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHHHHHHHHHh
Confidence            688999999999888899999999999999999999999975543322 11111111 2222334568999999999999


Q ss_pred             ccCCCCCCC-HHHHHcCCcCC
Q 048594          258 IRDPNNQIT-VAQILKHPWLN  277 (483)
Q Consensus       258 ~~dP~~R~t-~~e~L~h~~~~  277 (483)
                      +++|.+||+ ++++|+||||.
T Consensus       246 ~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        246 KYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             ccChhhCCchHHHHhcCCccc
Confidence            999999996 59999999996

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=2e-37  Score=313.30  Aligned_cols=225  Identities=29%  Similarity=0.415  Sum_probs=184.3

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------------------CC-----cCe
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------------------SD-----EGY   92 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------------------~~-----~~~   92 (483)
                      +|.+.+.||+|+||.||+|.+..+|+.||+|.+.....                                ..     ..|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            47889999999999999999999999999998854210                                01     238


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|+||+.+ +|.+.+.....+++..+..++.||+.||.|||++|++||||||+|||+   +.++.+||+|||++......
T Consensus        81 lv~e~~~~-~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~a~~~~~~  156 (372)
T cd07853          81 VVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEEPD  156 (372)
T ss_pred             EEeecccc-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE---CCCCCEEeccccceeecccC
Confidence            99999975 899998888889999999999999999999999999999999999999   67789999999999865432


Q ss_pred             c--eecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcc----------------
Q 048594          173 K--VYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR----------------  233 (483)
Q Consensus       173 ~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~----------------  233 (483)
                      .  ......+++.|+|||.+.+. .++.++||||+||++|+|++|++||.+.+....+..+...                
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~  236 (372)
T cd07853         157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA  236 (372)
T ss_pred             ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHH
Confidence            2  22334678999999998764 4788999999999999999999999887766655554321                


Q ss_pred             -------ccCCCC-----CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          234 -------EIDFKS-----DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       234 -------~~~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                             ....+.     ......++++.+||.+||+.||.+|||+.++|.||||..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  293 (372)
T cd07853         237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE  293 (372)
T ss_pred             HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence                   000000     111345789999999999999999999999999999983

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1e-37  Score=313.26  Aligned_cols=224  Identities=25%  Similarity=0.382  Sum_probs=177.6

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeEEEe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYLKRE   96 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E   96 (483)
                      ..+|..++.||+|+||.||+|.++.+|+.||||++......                               ...|+|+|
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  152 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE  152 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence            46788999999999999999999999999999998653211                               11189999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-ee
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~  175 (483)
                      ||.+++|...    ...++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++..+.... ..
T Consensus       153 ~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~  225 (353)
T PLN00034        153 FMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI---NSAKNVKIADFGVSRILAQTMDPC  225 (353)
T ss_pred             cCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEcccccceecccccccc
Confidence            9999988653    346788889999999999999999999999999999999   567889999999998764321 22


Q ss_pred             cccccCCcccCccccCC-----CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          176 EEVVGTPLYMAPELLGP-----CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      ....||..|+|||.+..     ...+.++|||||||++|+|++|+.||...........+..............++.+++
T Consensus       226 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  305 (353)
T PLN00034        226 NSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFR  305 (353)
T ss_pred             cccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHH
Confidence            34578999999998743     2235689999999999999999999974432222221111111122223356789999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      +||.+||..||.+|||+.|+|+||||..
T Consensus       306 ~li~~~l~~~P~~Rpt~~ell~hp~~~~  333 (353)
T PLN00034        306 HFISCCLQREPAKRWSAMQLLQHPFILR  333 (353)
T ss_pred             HHHHHHccCChhhCcCHHHHhcCccccc
Confidence            9999999999999999999999999984

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-38  Score=301.25  Aligned_cols=241  Identities=26%  Similarity=0.389  Sum_probs=193.6

Q ss_pred             CCccccccccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-----------------CC-------
Q 048594           34 DDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-----------------SD-------   89 (483)
Q Consensus        34 ~~~~~~~~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----------------~~-------   89 (483)
                      +.+.-++-...+.+.++|.+++.+|+|.||.|..|.++.++..+|+|+++.-..                 .+       
T Consensus        74 D~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rc  153 (415)
T KOG0671|consen   74 DKDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRC  153 (415)
T ss_pred             CCCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEE
Confidence            344445555667889999999999999999999999999999999999865321                 01       


Q ss_pred             -----------cCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC---
Q 048594           90 -----------EGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD---  153 (483)
Q Consensus        90 -----------~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~---  153 (483)
                                 ..|||+|.+ |.++.+++.++  .+++..+++.+++||+.++++||+.+++|.||||+|||+.+..   
T Consensus       154 v~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~  232 (415)
T KOG0671|consen  154 VQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFK  232 (415)
T ss_pred             EeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEE
Confidence                       118899998 66999999876  4799999999999999999999999999999999999996421   


Q ss_pred             --------------CCCcEEEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCC
Q 048594          154 --------------ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFW  219 (483)
Q Consensus       154 --------------~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~  219 (483)
                                    .+..|+|+|||.|+......  ...+.|..|+|||++.+.+++.++||||+||||+||.+|...|.
T Consensus       233 ~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq  310 (415)
T KOG0671|consen  233 TYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQ  310 (415)
T ss_pred             EeccCCccceeccCCCcceEEEecCCcceeccCc--ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecc
Confidence                          24579999999998754332  55678999999999999999999999999999999999999998


Q ss_pred             CCChHH---HHHHHHccc------------------cCCCCCCC---------------------CCCCHHHHHHHHHhC
Q 048594          220 AESLYG---TLTAIMSRE------------------IDFKSDPW---------------------PTISSSAKDLIRRML  257 (483)
Q Consensus       220 ~~~~~~---~~~~i~~~~------------------~~~~~~~~---------------------~~~~~~~~~li~~~L  257 (483)
                      ...+.+   +++.|....                  +.++....                     .....++.+||.+||
T Consensus       311 tHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL  390 (415)
T KOG0671|consen  311 THENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRML  390 (415)
T ss_pred             cCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHH
Confidence            877655   333333211                  11110000                     011235789999999


Q ss_pred             ccCCCCCCCHHHHHcCCcCC
Q 048594          258 IRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       258 ~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ..||.+|+|+.|+|.||||+
T Consensus       391 ~fDP~~RiTl~EAL~HpFF~  410 (415)
T KOG0671|consen  391 EFDPARRITLREALSHPFFA  410 (415)
T ss_pred             ccCccccccHHHHhcCHHhh
Confidence            99999999999999999998

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.3e-37  Score=298.14  Aligned_cols=223  Identities=28%  Similarity=0.451  Sum_probs=188.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------CeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------GYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~~lv~E~   97 (483)
                      ++|.+.+.||.|++|.||+|.+..++..+|+|.+........                               .|+|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            478999999999999999999999999999999875431110                               1899999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ceec
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVYE  176 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~~  176 (483)
                      +.+++|.+++... ++++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||.+...... ....
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~~~~  156 (274)
T cd06609          81 CGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL---SEEGDVKLADFGVSGQLTSTMSKRN  156 (274)
T ss_pred             eCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEcccccceeecccccccc
Confidence            9999999999765 89999999999999999999999999999999999999   66788999999999876543 2233


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHh
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM  256 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  256 (483)
                      ...+++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+.......+........  ....++..+.++|.+|
T Consensus       157 ~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~  234 (274)
T cd06609         157 TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSL--EGNKFSKPFKDFVSLC  234 (274)
T ss_pred             cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCC--cccccCHHHHHHHHHH
Confidence            45788899999999888899999999999999999999999987665555444444322111  1122788999999999


Q ss_pred             CccCCCCCCCHHHHHcCCcCC
Q 048594          257 LIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       257 L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      |..+|++|||++++++||||.
T Consensus       235 l~~~p~~Rpt~~~il~~~~~~  255 (274)
T cd06609         235 LNKDPKERPSAKELLKHKFIK  255 (274)
T ss_pred             hhCChhhCcCHHHHhhChhhc
Confidence            999999999999999999998

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8e-37  Score=293.31  Aligned_cols=223  Identities=25%  Similarity=0.443  Sum_probs=187.9

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------------CcCeE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------------DEGYL   93 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------------~~~~l   93 (483)
                      +.|.+.+.||+|++|.||+|.+..+++.+|+|.+......                                   +..|+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            3588999999999999999999999999999998654211                                   01199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |+||++|++|.+.+...+.+++..+..++.||+.||.|||+.|++|+||+|+||++   +.++.++|+|||.+.......
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv---~~~~~~~l~dfg~~~~~~~~~  158 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQTIC  158 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceeccccc
Confidence            99999999999999888889999999999999999999999999999999999999   566789999999987654321


Q ss_pred             ee----cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          174 VY----EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       174 ~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      ..    ....+++.|+|||.+.+..++.++|+||+|+++|+|++|..||...........+.......  .....++..+
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  236 (263)
T cd06625         159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP--QLPSHVSPDA  236 (263)
T ss_pred             cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCC--CCCccCCHHH
Confidence            11    23467889999999988888999999999999999999999998766555555544332221  1224678999


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .++|.+||..+|.+|||+.+++.||||
T Consensus       237 ~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         237 RNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-37  Score=295.24  Aligned_cols=217  Identities=35%  Similarity=0.528  Sum_probs=188.7

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~lv~E~~~g  100 (483)
                      +.||.|++|.||+|.++.+|+.+|+|++.+....                                  +..|+|+||+.|
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            5799999999999999999999999998754210                                  011899999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceeccccc
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG  180 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~g  180 (483)
                      ++|.+++...+++++..+..++.||+.||.|||+.+++|+||+|+||++   +..+.++|+|||++.....   .....+
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~---~~~~~~  155 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI---DQTGHLKLTDFGLSRNGLE---NKKFVG  155 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEeecccceeccc---cccCCC
Confidence            9999999888889999999999999999999999999999999999999   5677899999999876433   234468


Q ss_pred             CCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccC
Q 048594          181 TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD  260 (483)
Q Consensus       181 t~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  260 (483)
                      ++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+.......+......++....+.+++.+.++|.+||+.+
T Consensus       156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  235 (260)
T cd05611         156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD  235 (260)
T ss_pred             CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCC
Confidence            88999999998877899999999999999999999999888877777777766665555445578999999999999999


Q ss_pred             CCCCCC---HHHHHcCCcCC
Q 048594          261 PNNQIT---VAQILKHPWLN  277 (483)
Q Consensus       261 P~~R~t---~~e~L~h~~~~  277 (483)
                      |++|||   ++|+|.||||+
T Consensus       236 p~~R~~~~~~~~~l~~~~~~  255 (260)
T cd05611         236 PAKRLGANGYQEIKSHPFFK  255 (260)
T ss_pred             HHHccCCCcHHHHHcChHhh
Confidence            999995   57999999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.3e-38  Score=313.78  Aligned_cols=222  Identities=31%  Similarity=0.488  Sum_probs=194.0

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc---------------------------CeEEEe
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE---------------------------GYLKRE   96 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~---------------------------~~lv~E   96 (483)
                      ...+.+.|.+...+|.|+|+.|..|.+..+++.+++|++.+......                           .|+|||
T Consensus       317 ~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  317 TAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             cCCcchhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            34688899999999999999999999999999999999988731111                           099999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE  176 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~  176 (483)
                      ++.|+.|.+.+...+.+. ..+..|+.+|+.|+.|||++|++||||||+|||+.  +..+.++|+|||.+......  ..
T Consensus       397 ~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~~--~~  471 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELERS--CD  471 (612)
T ss_pred             hccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCchh--hc
Confidence            999999999998876666 88899999999999999999999999999999995  46678999999999887655  34


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY-GTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      +.+-|..|.|||++....|+.++||||||++||+||+|+.||...... +....+..+...      ..+|.++++||.+
T Consensus       472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s------~~vS~~AKdLl~~  545 (612)
T KOG0603|consen  472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS------ECVSDEAKDLLQQ  545 (612)
T ss_pred             ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc------cccCHHHHHHHHH
Confidence            557788999999999999999999999999999999999999876655 445555444333      5789999999999


Q ss_pred             hCccCCCCCCCHHHHHcCCcC
Q 048594          256 MLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ||+.||.+|+++.+++.||||
T Consensus       546 LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  546 LLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             hccCChhhCcChhhhccCcch
Confidence            999999999999999999999

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=2.9e-37  Score=307.37  Aligned_cols=226  Identities=27%  Similarity=0.416  Sum_probs=184.2

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeEEEe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYLKRE   96 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E   96 (483)
                      .++|++.+.||+|+||.||+|.++.++..+|+|.+......                               ...|+|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            46899999999999999999999999999999998754211                               01199999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      ||.|++|.+++...+.+++..+..++.||+.||.|||+. +++|+||||+|||+   +.++.+||+|||++...... ..
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~-~~  159 (333)
T cd06650          84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS-MA  159 (333)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE---cCCCCEEEeeCCcchhhhhh-cc
Confidence            999999999999888899999999999999999999975 79999999999999   56678999999998765332 22


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHc-----------------------
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS-----------------------  232 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~-----------------------  232 (483)
                      ....|++.|+|||.+.+..++.++|+||+||++|+|++|..||...........+..                       
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (333)
T cd06650         160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLS  239 (333)
T ss_pred             ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhh
Confidence            345789999999999888889999999999999999999999976544332211100                       


Q ss_pred             -----------------cccCCCCC--CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          233 -----------------REIDFKSD--PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       233 -----------------~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                       .......+  +...++.++++||.+||++||.+|||+.|++.||||+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~  303 (333)
T cd06650         240 SYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIK  303 (333)
T ss_pred             hhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHh
Confidence                             00000000  1123578899999999999999999999999999998

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=9.1e-37  Score=296.62  Aligned_cols=225  Identities=26%  Similarity=0.463  Sum_probs=184.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------CeEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GYLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~lv~E   96 (483)
                      ++|++.+.||+|++|.||+|.++.+|+.+|+|++........                                .|+|+|
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            479999999999999999999999999999999865421110                                189999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-ee
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~  175 (483)
                      |++++.|..++.....+++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||.+....... ..
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~~~  157 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPGDDY  157 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEE---cCCCcEEECccccceecCCCcccc
Confidence            99998888887777789999999999999999999999999999999999999   566789999999998765433 22


Q ss_pred             cccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc-------------------
Q 048594          176 EEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI-------------------  235 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~-------------------  235 (483)
                      ....++..|+|||.+.+ ..++.++|+||+|+++|+|++|.+||.+....+....+.....                   
T Consensus       158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07847         158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGL  237 (286)
T ss_pred             cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccc
Confidence            34567889999999865 4578899999999999999999999988766554444322100                   


Q ss_pred             CCCC--------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          236 DFKS--------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       236 ~~~~--------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ..+.        ..++.++..+.+||.+||+++|++|||+.+++.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         238 SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             cCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            0000        0124568889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=8.7e-37  Score=297.93  Aligned_cols=220  Identities=34%  Similarity=0.570  Sum_probs=192.3

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~   95 (483)
                      ++|.+.+.||+|++|.||+|.++.+++.+|+|++......                                 ...|+||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            4699999999999999999999999999999998653210                                 1118999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      ||+++++|.+++.....+++..+..++.||+.||.|||+.|++|+||+|.||++   +.++.++|+|||++......  .
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~~--~  155 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL---DSDGYIKITDFGFAKRVKGR--T  155 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEeeCCCccccCCC--C
Confidence            999999999999888899999999999999999999999999999999999999   56778999999998876544  3


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....+++.|+|||.+.+...+.++|+||||+++|+|++|..||...........+..+...++    ..++..++++|.+
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~  231 (290)
T cd05580         156 YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFP----SFFSPDAKDLIRN  231 (290)
T ss_pred             CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCC----ccCCHHHHHHHHH
Confidence            345789999999999887888999999999999999999999988776666677665544433    3568999999999


Q ss_pred             hCccCCCCCC-----CHHHHHcCCcCC
Q 048594          256 MLIRDPNNQI-----TVAQILKHPWLN  277 (483)
Q Consensus       256 ~L~~dP~~R~-----t~~e~L~h~~~~  277 (483)
                      ||..+|.+|+     ++++++.||||.
T Consensus       232 ~l~~~p~~R~~~~~~~~~~l~~~~~~~  258 (290)
T cd05580         232 LLQVDLTKRLGNLKNGVNDIKNHPWFA  258 (290)
T ss_pred             HccCCHHHccCcccCCHHHHHcCcccc
Confidence            9999999999     999999999997

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=7.9e-37  Score=299.85  Aligned_cols=226  Identities=24%  Similarity=0.395  Sum_probs=183.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------CeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------GYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~~lv~E~   97 (483)
                      ++|.+++.||.|++|.||+|.++.++..||+|.+........                               .|+|+||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            479999999999999999999999999999999875432111                               1899999


Q ss_pred             cCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-ee
Q 048594           98 CDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~  175 (483)
                      +.+ +|.+++... ..+++..+..++.||+.||.|||+.+++|+||||+||++   +.++.++|+|||.+....... ..
T Consensus        86 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~  161 (301)
T cd07873          86 LDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTY  161 (301)
T ss_pred             ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE---CCCCcEEECcCcchhccCCCCCcc
Confidence            975 898888754 568999999999999999999999999999999999999   567789999999987643221 22


Q ss_pred             cccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC------------------
Q 048594          176 EEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID------------------  236 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~------------------  236 (483)
                      ....+++.|+|||.+.+. .++.++|||||||++|+|++|.+||.+.+.......+......                  
T Consensus       162 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (301)
T cd07873         162 SNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSY  241 (301)
T ss_pred             cccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccccc
Confidence            334578899999988653 4688999999999999999999999887765554443321110                  


Q ss_pred             -CCC-------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          237 -FKS-------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       237 -~~~-------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                       ++.       ...+.+++.+++||.+||+.||.+|||++++|+||||..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~  291 (301)
T cd07873         242 NYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC  291 (301)
T ss_pred             ccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence             000       012357889999999999999999999999999999983

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-37  Score=303.02  Aligned_cols=216  Identities=26%  Similarity=0.391  Sum_probs=181.9

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCE-EEEEEeccCCCC-------------------------------C--cCeEEE
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQ-FACKSISKTSKS-------------------------------D--EGYLKR   95 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~-~avK~~~~~~~~-------------------------------~--~~~lv~   95 (483)
                      ...+.+.||+|+||+||++..+  |.. +|+|++......                               .  ..+|||
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt  119 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT  119 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence            4455666999999999999998  555 999999864311                               1  238999


Q ss_pred             eccCCCChHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeeCCCCCeEEEeeCCCCC-cEEEeecccceeccC
Q 048594           96 EHCDGGTLVDRISD--RERYTERAAASVFRSVVNALHACHSNG-IMHRDLKPENFIFTTDDENA-TLKATDFGLAFFFEE  171 (483)
Q Consensus        96 E~~~g~~L~~~l~~--~~~l~~~~~~~i~~qil~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~-~ikl~Dfg~a~~~~~  171 (483)
                      ||+++|+|.+++..  ...++...+..++.+|+.|+.|||+++ ||||||||+|||+   +... .+||+|||+++....
T Consensus       120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv---~~~~~~~KI~DFGlsr~~~~  196 (362)
T KOG0192|consen  120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV---DLKGKTLKIADFGLSREKVI  196 (362)
T ss_pred             EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE---cCCCCEEEECCCccceeecc
Confidence            99999999999987  688999999999999999999999999 9999999999999   5665 999999999987654


Q ss_pred             C-ceecccccCCcccCccccC--CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          172 G-KVYEEVVGTPLYMAPELLG--PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       172 ~-~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      . .......||+.|||||++.  ...|+.++||||+|+++|||+||..||.+.........+.........+  ...++.
T Consensus       197 ~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p--~~~~~~  274 (362)
T KOG0192|consen  197 SKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP--KECPPH  274 (362)
T ss_pred             ccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--ccCCHH
Confidence            3 2233368999999999999  5689999999999999999999999999988766666665444332221  237899


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHc
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +..++..||..||.+||+..+++.
T Consensus       275 l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  275 LSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             HHHHHHHhCCCCCCcCCCHHHHHH
Confidence            999999999999999999998765

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=4.1e-37  Score=304.07  Aligned_cols=222  Identities=27%  Similarity=0.395  Sum_probs=169.0

Q ss_pred             eeeecccCceeEEEEEEC--CCCCEEEEEEeccCCCC------------------------------CcCeEEEeccCCC
Q 048594           54 AEELCRGESGRIYLCTEN--STGLQFACKSISKTSKS------------------------------DEGYLKREHCDGG  101 (483)
Q Consensus        54 ~~~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~------------------------------~~~~lv~E~~~g~  101 (483)
                      .+.||+|+||+||+|.++  .+++.+|+|.+......                              ...|+|+||+.+ 
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-   84 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-   84 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-
Confidence            467999999999999976  46789999998654211                              111799999965 


Q ss_pred             ChHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC-CCCCcEEEeecccceeccC
Q 048594          102 TLVDRISDR---------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD-DENATLKATDFGLAFFFEE  171 (483)
Q Consensus       102 ~L~~~l~~~---------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~-~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +|.+++...         ..+++..++.++.||+.||.|||++||+||||||+|||+... +..+.+||+|||++.....
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~  164 (317)
T cd07868          85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS  164 (317)
T ss_pred             CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCC
Confidence            788877532         258999999999999999999999999999999999999643 3457899999999986543


Q ss_pred             Cc----eecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCCh---------HHHHHHHHccccC-
Q 048594          172 GK----VYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESL---------YGTLTAIMSREID-  236 (483)
Q Consensus       172 ~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~---------~~~~~~i~~~~~~-  236 (483)
                      ..    ......||+.|+|||++.+. .++.++|+||+||++|+|++|.+||.+...         ...+..+...... 
T Consensus       165 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (317)
T cd07868         165 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP  244 (317)
T ss_pred             CCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCC
Confidence            21    22345789999999998763 578999999999999999999999965432         1112221110000 


Q ss_pred             ----------C-----------------------CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 ----------F-----------------------KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 ----------~-----------------------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                                .                       ........+..+.+||.+||++||.+|||++|+|+||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         245 ADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             ChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                      0                       000011235678999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=5e-37  Score=331.20  Aligned_cols=230  Identities=28%  Similarity=0.459  Sum_probs=188.5

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------Cc
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DE   90 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~   90 (483)
                      +...++|.+++.||.|+||+||+|.++.++..+|+|++......                                  ..
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence            44557899999999999999999999999999999998753211                                  11


Q ss_pred             CeEEEeccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeeeCCCCCeEEEeeC-------
Q 048594           91 GYLKREHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSN-------GIMHRDLKPENFIFTTD-------  152 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~-------~ivH~dlkp~NIll~~~-------  152 (483)
                      .|||||||.+++|.++|..    ...+++..++.|+.||+.||.|||+.       +|+||||||+|||+...       
T Consensus        89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i  168 (1021)
T PTZ00266         89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI  168 (1021)
T ss_pred             EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence            2899999999999999875    25799999999999999999999984       49999999999999532       


Q ss_pred             -------CCCCcEEEeecccceeccCCceecccccCCcccCccccCC--CCCCCcCchHHHHHHHHHHhhCCCCCCCCCh
Q 048594          153 -------DENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP--CKYGKEIDIWSAGLILYNLLSGAQPFWAESL  223 (483)
Q Consensus       153 -------~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~~ll~g~~pf~~~~~  223 (483)
                             +....+||+|||++..+..........||+.|+|||++.+  ..++.++||||||||+|+|++|..||.....
T Consensus       169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~  248 (1021)
T PTZ00266        169 TAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN  248 (1021)
T ss_pred             cccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence                   1234699999999987654444445679999999999854  3578899999999999999999999977655


Q ss_pred             HHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          224 YGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       224 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ...+........   ..+.+..+.++.+||..||.++|.+|||+.|+|.|||+.
T Consensus       249 ~~qli~~lk~~p---~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik  299 (1021)
T PTZ00266        249 FSQLISELKRGP---DLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIK  299 (1021)
T ss_pred             HHHHHHHHhcCC---CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence            444333333222   223346789999999999999999999999999999997

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=5.1e-37  Score=319.75  Aligned_cols=225  Identities=28%  Similarity=0.432  Sum_probs=191.6

Q ss_pred             cccceEEeeeecccCceeEEEEEECCC-CCEEEEEEeccCCCC------------------------------CcCeEEE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENST-GLQFACKSISKTSKS------------------------------DEGYLKR   95 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~avK~~~~~~~~------------------------------~~~~lv~   95 (483)
                      ....|.+.+.||+|++|.||+|.+..+ +..+|+|.+......                              ...|+||
T Consensus        65 ~~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~  144 (478)
T PTZ00267         65 REHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIM  144 (478)
T ss_pred             cceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEE
Confidence            344599999999999999999999888 788999987543211                              1119999


Q ss_pred             eccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           96 EHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        96 E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |||+||+|.+++.+    ..++++..+..++.||+.||.|||+++|+||||||+|||+   +..+.+||+|||++..+..
T Consensus       145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll---~~~~~~kL~DFgla~~~~~  221 (478)
T PTZ00267        145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL---MPTGIIKLGDFGFSKQYSD  221 (478)
T ss_pred             ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEE---CCCCcEEEEeCcCceecCC
Confidence            99999999987753    4579999999999999999999999999999999999999   5678999999999987653


Q ss_pred             Cc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          172 GK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       172 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      ..   .....+||+.|+|||++.+..++.++||||+||++|+|++|..||.+......+..+..+....   ....++.+
T Consensus       222 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~s~~  298 (478)
T PTZ00267        222 SVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP---FPCPVSSG  298 (478)
T ss_pred             ccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC---CCccCCHH
Confidence            32   1234579999999999998889999999999999999999999999888877777776654431   12357899


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +.++|.+||.++|.+|||+.+++.|+|++
T Consensus       299 ~~~li~~~L~~dP~~Rps~~~~l~~~~~~  327 (478)
T PTZ00267        299 MKALLDPLLSKNPALRPTTQQLLHTEFLK  327 (478)
T ss_pred             HHHHHHHHhccChhhCcCHHHHHhCHHHH
Confidence            99999999999999999999999999996

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.4e-36  Score=297.38  Aligned_cols=230  Identities=28%  Similarity=0.488  Sum_probs=191.0

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------cCeE
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------EGYL   93 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------~~~l   93 (483)
                      +.+...+|.+.+.||+|++|.||+|+++.++..+|+|.+.......                              ..|+
T Consensus        15 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~l   94 (296)
T cd06654          15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV   94 (296)
T ss_pred             cCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence            3466679999999999999999999999999999999987643211                              1199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |+||+.|++|.+++.+ ..+++..+..++.||+.||.|||+.|++|+||+|+||++   +.++.++|+|||.+.......
T Consensus        95 v~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill---~~~~~~kl~dfg~~~~~~~~~  170 (296)
T cd06654          95 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQ  170 (296)
T ss_pred             eecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEECccccchhccccc
Confidence            9999999999999865 468999999999999999999999999999999999999   567789999999887654322


Q ss_pred             e-ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          174 V-YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       174 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      . .....+++.|+|||.+.+..++.++|+||+||++|+|++|..||...........+...... .......+++.+.++
T Consensus       171 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l  249 (296)
T cd06654         171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIFRDF  249 (296)
T ss_pred             cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCC-CCCCccccCHHHHHH
Confidence            1 23357889999999998878899999999999999999999999877654444433322211 112234678899999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      |.+||..+|.+|||+.+++.||||..
T Consensus       250 i~~~l~~~p~~Rpt~~eil~~~~~~~  275 (296)
T cd06654         250 LNRCLDMDVEKRGSAKELLQHQFLKI  275 (296)
T ss_pred             HHHHCcCCcccCcCHHHHhhChhhhc
Confidence            99999999999999999999999983

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=7e-37  Score=296.98  Aligned_cols=218  Identities=27%  Similarity=0.437  Sum_probs=178.1

Q ss_pred             eecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------CcCeEEEeccC
Q 048594           56 ELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------DEGYLKREHCD   99 (483)
Q Consensus        56 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------~~~~lv~E~~~   99 (483)
                      .||+|+||.||++.+..+|+.+|+|.+.+....                                    +..|+||||+.
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999999999999999988653211                                    01189999999


Q ss_pred             CCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccc
Q 048594          100 GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV  179 (483)
Q Consensus       100 g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~  179 (483)
                      |++|.+++...+.+++..+..++.||+.||.|||+++++|+||||+||++   +.++.++|+|||++....... .....
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~---~~~~~~~l~dfg~~~~~~~~~-~~~~~  156 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKK-PHASV  156 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE---CCCCCEEEccCCcceeccccC-ccCcC
Confidence            99999999888899999999999999999999999999999999999999   667799999999987654332 23457


Q ss_pred             cCCcccCccccC-CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCc
Q 048594          180 GTPLYMAPELLG-PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI  258 (483)
Q Consensus       180 gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  258 (483)
                      |++.|+|||.+. +..++.++|+||+||++|+|++|..||........ ..+............+.++++++++|.+||.
T Consensus       157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  235 (279)
T cd05633         157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTVNVELPDSFSPELKSLLEGLLQ  235 (279)
T ss_pred             CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHhhcCCcCCccccCHHHHHHHHHHhc
Confidence            899999999886 44578999999999999999999999975432111 1111111122222335688999999999999


Q ss_pred             cCCCCCC-----CHHHHHcCCcCCC
Q 048594          259 RDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       259 ~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      .||.+||     |++++++||||+.
T Consensus       236 ~~p~~R~~~~~~~~~~~~~h~~~~~  260 (279)
T cd05633         236 RDVSKRLGCLGRGAQEVKEHVFFKG  260 (279)
T ss_pred             CCHHHhcCCCCCCHHHHHhCccccC
Confidence            9999999     6999999999983

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=1.1e-36  Score=295.99  Aligned_cols=223  Identities=27%  Similarity=0.490  Sum_probs=178.0

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E~   97 (483)
                      +|.+.+.||+|++|.||+|.++.+|..+|+|.+.......                                ..|+|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            5899999999999999999999999999999987542111                                01999999


Q ss_pred             cCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-ee
Q 048594           98 CDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~  175 (483)
                      |.+ +|.+++.. .+++++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+....... ..
T Consensus        81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~  156 (284)
T cd07839          81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVRCY  156 (284)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---cCCCcEEECccchhhccCCCCCCc
Confidence            976 78887764 5679999999999999999999999999999999999999   567789999999987654322 22


Q ss_pred             cccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCC-CCChHHHHHHHHcccc--------------C---
Q 048594          176 EEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFW-AESLYGTLTAIMSREI--------------D---  236 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~-~~~~~~~~~~i~~~~~--------------~---  236 (483)
                      ....+++.|+|||.+.+. .++.++|+||+||++|+|++|..||. +.+....+..+.....              .   
T Consensus       157 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd07839         157 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKP  236 (284)
T ss_pred             CCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccc
Confidence            334678899999988664 46889999999999999999988864 3443344333322100              0   


Q ss_pred             CC--------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 FK--------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 ~~--------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ++        ....+.+++++++||.+||+.||.+|||+++++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         237 YPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             cCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            00        01124578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-37  Score=310.90  Aligned_cols=226  Identities=35%  Similarity=0.610  Sum_probs=208.4

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------CeE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GYL   93 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~l   93 (483)
                      .-..-|.+.+.||+|.|++|.++++..|+..||||.+.+......                                .|+
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence            445679999999999999999999999999999999988763222                                199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ||||+.+|.+.+++...+++.+..++.++.|+++|++|||+++|||||||++|||+   +.+..+||+|||++..+..+.
T Consensus       133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~~~~~  209 (596)
T KOG0586|consen  133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFFDYGL  209 (596)
T ss_pred             EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceeecccc
Confidence            99999999999999999999999999999999999999999999999999999999   677789999999999999888


Q ss_pred             eecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ...+.||++.|.|||++.+..| ++++|+||+|+++|-|+.|.+||.+.+..+.-.....+.+..+.    .++.+.+++
T Consensus       210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~----~ms~dce~l  285 (596)
T KOG0586|consen  210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPF----YMSCDCEDL  285 (596)
T ss_pred             cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccc----eeechhHHH
Confidence            8899999999999999999888 68999999999999999999999999988888888888777654    578899999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      |+++|..+|.+|+++++++.|.|...
T Consensus       286 Lrk~lvl~Pskr~~~dqim~~~W~n~  311 (596)
T KOG0586|consen  286 LRKFLVLNPSKRGPCDQIMKDRWRND  311 (596)
T ss_pred             HHHhhccCccccCCHHHhhhhcccch
Confidence            99999999999999999999999983

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=9e-37  Score=294.56  Aligned_cols=226  Identities=27%  Similarity=0.445  Sum_probs=185.5

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------C
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------D   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------~   89 (483)
                      +....|.+.+.||+|+||.||+|.++.+++.+|+|.+......                                    .
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            3456799999999999999999999999999999998653210                                    1


Q ss_pred             cCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           90 EGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                      ..|+|+||+.+++|.+++...  ..+++..+..++.||+.||+|||+++|+|+||+|+||++   +.++.++|+|||++.
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili---~~~~~~~l~Dfg~~~  159 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSA  159 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE---CCCCCEEEccCCCce
Confidence            127999999999999999864  468999999999999999999999999999999999999   567789999999987


Q ss_pred             eccCC-ceecccccCCcccCccccC-----CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCC
Q 048594          168 FFEEG-KVYEEVVGTPLYMAPELLG-----PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP  241 (483)
Q Consensus       168 ~~~~~-~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  241 (483)
                      ..... .......|++.|+|||++.     ...++.++|+||+||++|+|++|..||...........+.....  ....
T Consensus       160 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~  237 (272)
T cd06637         160 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA--PRLK  237 (272)
T ss_pred             ecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCC--CCCC
Confidence            65432 2223457899999999985     33578899999999999999999999976655444444333221  1222


Q ss_pred             CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          242 WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       242 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ...++.++++|+.+||..+|.+|||+.+++.||||
T Consensus       238 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         238 SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            34578899999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=7.3e-37  Score=307.36  Aligned_cols=225  Identities=23%  Similarity=0.357  Sum_probs=176.2

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------CCcCeEEEeccCCCChH
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------SDEGYLKREHCDGGTLV  104 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------~~~~~lv~E~~~g~~L~  104 (483)
                      ..|.+++.||+|+||.||+|.++.++..||+|+......                        ....|+|+|++.+ +|.
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~  144 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSS-DLY  144 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCC-cHH
Confidence            479999999999999999999999999999998654321                        1112899999965 788


Q ss_pred             HHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccccCCc
Q 048594          105 DRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL  183 (483)
Q Consensus       105 ~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~  183 (483)
                      +++.. ..++++..+..++.||+.||.|||++||+||||||+|||+   +..+.++|+|||.+.............||+.
T Consensus       145 ~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~  221 (357)
T PHA03209        145 TYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFPVVAPAFLGLAGTVE  221 (357)
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCccccccccCccccccccccc
Confidence            88765 4679999999999999999999999999999999999999   6677899999999875443333345678999


Q ss_pred             ccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh----------HHHHHHHHcc----ccCCCC----------
Q 048594          184 YMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL----------YGTLTAIMSR----EIDFKS----------  239 (483)
Q Consensus       184 y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~----------~~~~~~i~~~----~~~~~~----------  239 (483)
                      |+|||++.+..++.++|+||+||++|+|+++..|+.....          ...+..+...    ...++.          
T Consensus       222 y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (357)
T PHA03209        222 TNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGF  301 (357)
T ss_pred             ccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHH
Confidence            9999999888899999999999999999986555433211          0111111110    000110          


Q ss_pred             ----------------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          240 ----------------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       240 ----------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                      .....++.++.+||.+||+.||.+|||+.|+|+||||+
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~  355 (357)
T PHA03209        302 IEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFA  355 (357)
T ss_pred             HhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhc
Confidence                            00124567788899999999999999999999999997

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-36  Score=299.80  Aligned_cols=225  Identities=33%  Similarity=0.551  Sum_probs=192.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~lv~   95 (483)
                      ++|.+.+.||+|++|.||+|.+..+++.+|+|.+.+.....                                 ..|+|+
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            47999999999999999999999999999999998654221                                 019999


Q ss_pred             eccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           96 EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ||+.|++|.+++...  ..+++..+..++.||+.||.|||+.|++|+||||+||++   +.++.++|+|||.+.......
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~  157 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL---HESGHIMLSDFDLSKQSDVEP  157 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEE---cCCCCEEEeecchhhcccccc
Confidence            999999999998754  568999999999999999999999999999999999999   567789999999886543211


Q ss_pred             e------------------------------ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh
Q 048594          174 V------------------------------YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL  223 (483)
Q Consensus       174 ~------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~  223 (483)
                      .                              .....|+..|+|||++.+..++.++||||+|+++|+|++|..||.+.+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~  237 (316)
T cd05574         158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR  237 (316)
T ss_pred             cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence            0                              1123678899999999888889999999999999999999999998887


Q ss_pred             HHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCC----HHHHHcCCcCCC
Q 048594          224 YGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT----VAQILKHPWLNY  278 (483)
Q Consensus       224 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~L~h~~~~~  278 (483)
                      ...+..+......++.  ...++..++++|.+||..+|.+|||    ++++|.||||+.
T Consensus       238 ~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~  294 (316)
T cd05574         238 DETFSNILKKEVTFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG  294 (316)
T ss_pred             HHHHHHHhcCCccCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence            7777777765554433  2337899999999999999999999    999999999984

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-40  Score=300.01  Aligned_cols=226  Identities=24%  Similarity=0.437  Sum_probs=188.9

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------CCcCeEEEeccC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------SDEGYLKREHCD   99 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------~~~~~lv~E~~~   99 (483)
                      .+-|.++..||+|+||.||+++|+.+|+.+|||.+.....                            ....+||||||.
T Consensus        32 EEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG  111 (502)
T KOG0574|consen   32 EEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG  111 (502)
T ss_pred             HHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence            3457899999999999999999999999999999987642                            122299999999


Q ss_pred             CCChHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ceecc
Q 048594          100 GGTLVDRIS-DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVYEE  177 (483)
Q Consensus       100 g~~L~~~l~-~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~~~  177 (483)
                      .|++.+.+. ++++++|.++..+++.-+.||+|||-..-+|||||..|||+   +..|..||+|||+|..+++. ...++
T Consensus       112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLTDTMAKRNT  188 (502)
T KOG0574|consen  112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLTDTMAKRNT  188 (502)
T ss_pred             CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhhhhHHhhCc
Confidence            999999986 45789999999999999999999999999999999999999   77889999999999988643 22356


Q ss_pred             cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhC
Q 048594          178 VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML  257 (483)
Q Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  257 (483)
                      ..|||.|||||++..-.|+.++||||||++..+|..|++||.+......+-.|-...++ ........|.++.+||++||
T Consensus       189 VIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPP-TF~KPE~WS~~F~DFi~~CL  267 (502)
T KOG0574|consen  189 VIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPP-TFKKPEEWSSEFNDFIRSCL  267 (502)
T ss_pred             cccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCC-CCCChHhhhhHHHHHHHHHh
Confidence            78999999999999889999999999999999999999999765432222221111110 00011246788999999999


Q ss_pred             ccCCCCCCCHHHHHcCCcCC
Q 048594          258 IRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       258 ~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+.|++|-|+-++++|||++
T Consensus       268 iK~PE~R~TA~~L~~H~Fik  287 (502)
T KOG0574|consen  268 IKKPEERKTALRLCEHTFIK  287 (502)
T ss_pred             cCCHHHHHHHHHHhhhhhhc
Confidence            99999999999999999998

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=6.8e-37  Score=294.72  Aligned_cols=225  Identities=26%  Similarity=0.419  Sum_probs=185.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEEec
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKREH   97 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~E~   97 (483)
                      .++|.+.+.||+|++|.||+|.+..+++.+|+|++......                              +..|+|+||
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            45799999999999999999999999999999998754311                              111999999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-eec
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYE  176 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~~  176 (483)
                      |.+++|.+++...+.+++..+..++.||+.||.|||+.|++|+||||+||++   +..+.++|+|||.+....... ...
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~~~~~~~~~~  164 (267)
T cd06645          88 CGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL---TDNGHVKLADFGVSAQITATIAKRK  164 (267)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECcceeeeEccCcccccc
Confidence            9999999999888899999999999999999999999999999999999999   567789999999987654321 223


Q ss_pred             ccccCCcccCccccC---CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC-CCCCCCCHHHHHH
Q 048594          177 EVVGTPLYMAPELLG---PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS-DPWPTISSSAKDL  252 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~l  252 (483)
                      ...|++.|+|||.+.   ...++.++|+||+||++|+|++|..||...................+. .....++..+.+|
T Consensus       165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  244 (267)
T cd06645         165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHF  244 (267)
T ss_pred             cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHH
Confidence            457899999999874   445788999999999999999999999765544443333333222111 1112467889999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCc
Q 048594          253 IRRMLIRDPNNQITVAQILKHPW  275 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~  275 (483)
                      |.+||..+|.+|||++++++|||
T Consensus       245 i~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         245 VKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HHHHccCCchhCcCHHHHhcCCC
Confidence            99999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=3.8e-36  Score=287.25  Aligned_cols=221  Identities=25%  Similarity=0.413  Sum_probs=188.9

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------CcCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------DEGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------~~~~lv~E~   97 (483)
                      +|.+.+.||+|++|.||+|.++.+|..+|+|.+......                                ...|+|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            488999999999999999999999999999998653211                                111999999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      ++|++|.+++...  ..+++..+..++.||+.||.|||+.|++|+||+|+||++   +..+.++|+|||.+........ 
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili---~~~~~~~l~df~~~~~~~~~~~~  157 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL---DAYDNVKIGDLGVAKLLSDNTNF  157 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---eCCCCEEEcccccceeccCccch
Confidence            9999999999764  578999999999999999999999999999999999999   5667899999999887654322 


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .....|++.|+|||++.+..++.++|+||||+++++|++|..||...+.......+.........   ..++.++.++|.
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~  234 (256)
T cd08529         158 ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVS---QMYSQQLAQLID  234 (256)
T ss_pred             hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCHHHHHHHH
Confidence            23456889999999998888899999999999999999999999888876666666654432211   257899999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcC
Q 048594          255 RMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      +||+.+|++||++.++++|||+
T Consensus       235 ~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         235 QCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             HHccCCcccCcCHHHHhhCCCC
Confidence            9999999999999999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.9e-36  Score=291.14  Aligned_cols=225  Identities=27%  Similarity=0.436  Sum_probs=186.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------CeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------GYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~~lv~E~   97 (483)
                      ++|++.+.||.|++|+||+|....++..+|+|++........                               .|+|+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            479999999999999999999999999999999875432111                               1899999


Q ss_pred             cCCCChHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           98 CDGGTLVDRISDR---ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        98 ~~g~~L~~~l~~~---~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      |+|++|.+++...   ..+++..+..++.||+.||.|||+.|++|+||+|+||++   +.++.++|+|||.+..+.....
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~---~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEcccchHHHhccCcc
Confidence            9999999999764   458999999999999999999999999999999999999   5667899999999876653322


Q ss_pred             e-----cccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC--CCCCCC
Q 048594          175 Y-----EEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD--PWPTIS  246 (483)
Q Consensus       175 ~-----~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~  246 (483)
                      .     ....|++.|+|||.+... .++.++|+||+||++++|++|..||...+.......+..........  .+..++
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYS  237 (267)
T ss_pred             ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCcccccccc
Confidence            1     234688899999998776 67899999999999999999999998776655555544432221111  124678


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      +.+.+++.+||..||.+|||+.+++.||||
T Consensus       238 ~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         238 KSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            999999999999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=4.8e-36  Score=286.56  Aligned_cols=222  Identities=29%  Similarity=0.431  Sum_probs=189.1

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E~   97 (483)
                      +|.+.+.||+|++|.||+|.+..+++.+|+|.+.......                                ..++|+||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            5899999999999999999999999999999987643211                                11999999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      ++|++|.+++...  ..+++..+..++.+++.+|.|||++|++|+||+|+||++.  .....++|+|||.+.........
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~l~d~~~~~~~~~~~~~  158 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGISKILSSKSKA  158 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccCCCceecCCCccc
Confidence            9999999999764  4589999999999999999999999999999999999994  23456899999999877654444


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....+++.|+|||.+.+..++.++|+||+|+++|+|++|..||.+.+.......+.......   ....+++.+.++|.+
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~  235 (256)
T cd08220         159 YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP---ISDRYSPDLRQLILS  235 (256)
T ss_pred             cccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCC---CCCCcCHHHHHHHHH
Confidence            45678899999999988888999999999999999999999998877666666665443221   123578999999999


Q ss_pred             hCccCCCCCCCHHHHHcCCcC
Q 048594          256 MLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ||..+|.+|||+.+++.||||
T Consensus       236 ~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         236 MLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             HccCChhhCCCHHHHhhCCCC
Confidence            999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-37  Score=280.83  Aligned_cols=224  Identities=25%  Similarity=0.455  Sum_probs=185.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC-----------------eEEE---------------e
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG-----------------YLKR---------------E   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------~lv~---------------E   96 (483)
                      ++..++..||+|+.|.|+++..+++|...|||.+......++.                 |||.               |
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe  171 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME  171 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence            4556678899999999999999999999999999887644333                 4444               2


Q ss_pred             ccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           97 HCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      .+.. .+..++.. .++++|..+-++..-++.||.||-. ++|+|||+||+|||+   +..|.|||||||.+..+.++..
T Consensus       172 lMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvdSkA  247 (391)
T KOG0983|consen  172 LMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVDSKA  247 (391)
T ss_pred             HHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeecccc
Confidence            2211 22222222 3679999999999999999999995 589999999999999   7889999999999999888877


Q ss_pred             ecccccCCcccCccccCCC---CCCCcCchHHHHHHHHHHhhCCCCCCCC-ChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPC---KYGKEIDIWSAGLILYNLLSGAQPFWAE-SLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      .....|.+.|||||.+...   .|.-++||||||++++||.||+.||.+. .+.+++..+.+..+...+.. ..+|+.++
T Consensus       248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~-~gFSp~F~  326 (391)
T KOG0983|consen  248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGH-MGFSPDFQ  326 (391)
T ss_pred             cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcc-cCcCHHHH
Confidence            7778899999999998643   5788999999999999999999999874 56788888887555332222 34899999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +|+..||++|+.+||.+.++|+|||+.
T Consensus       327 ~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~  353 (391)
T KOG0983|consen  327 SFVKDCLTKDHRKRPKYNKLLEHPFIK  353 (391)
T ss_pred             HHHHHHhhcCcccCcchHHHhcCccee
Confidence            999999999999999999999999997

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1.2e-36  Score=298.03  Aligned_cols=229  Identities=29%  Similarity=0.500  Sum_probs=189.8

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------cCeE
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------EGYL   93 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------~~~l   93 (483)
                      ..+...+|.+++.||+|++|.||+|+++.+|+.||+|.+.......                              ..|+
T Consensus        14 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l   93 (297)
T cd06656          14 VGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV   93 (297)
T ss_pred             cCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence            3567789999999999999999999999999999999987543211                              1199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |+||++|++|.+++.+ ..+++..+..++.|++.||.|||+.+++|+||+|+||++   +.++.++|+|||.+.......
T Consensus        94 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili---~~~~~~~l~Dfg~~~~~~~~~  169 (297)
T cd06656          94 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQ  169 (297)
T ss_pred             eecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEECcCccceEccCCc
Confidence            9999999999999865 468999999999999999999999999999999999999   567789999999987654332


Q ss_pred             e-ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          174 V-YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       174 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      . .....+++.|+|||.+.+..++.++|+||+||++|+|++|..||.+.+.......+..... ........++..+++|
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l  248 (297)
T cd06656         170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PELQNPERLSAVFRDF  248 (297)
T ss_pred             cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCC-CCCCCccccCHHHHHH
Confidence            2 2335688899999999888889999999999999999999999987654433332222111 1111224578899999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      |.+||..+|.+|||+.++++||||.
T Consensus       249 i~~~l~~~p~~Rps~~~il~~~~~~  273 (297)
T cd06656         249 LNRCLEMDVDRRGSAKELLQHPFLK  273 (297)
T ss_pred             HHHHccCChhhCcCHHHHhcCchhc
Confidence            9999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=1.3e-36  Score=303.27  Aligned_cols=219  Identities=20%  Similarity=0.292  Sum_probs=174.7

Q ss_pred             ccceEEeeeecccCceeEEEEEE-----CCCCCEEEEEEeccCCCC---------------------------------C
Q 048594           48 KLHFTIAEELCRGESGRIYLCTE-----NSTGLQFACKSISKTSKS---------------------------------D   89 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~~avK~~~~~~~~---------------------------------~   89 (483)
                      .++|.+.+.||+|+||.||+|.+     +.++..||+|++......                                 .
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            36899999999999999999975     345678999998643210                                 1


Q ss_pred             cCeEEEeccCCCChHHHHhcC-----------------------------------------------------------
Q 048594           90 EGYLKREHCDGGTLVDRISDR-----------------------------------------------------------  110 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~-----------------------------------------------------------  110 (483)
                      ..|+|||||++|+|.+++...                                                           
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            128999999999999998643                                                           


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee---cccccCCcc
Q 048594          111 ---ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY---EEVVGTPLY  184 (483)
Q Consensus       111 ---~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~---~~~~gt~~y  184 (483)
                         .++++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++.........   ....+++.|
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y  242 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW  242 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE---cCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence               247788899999999999999999999999999999999   56778999999999765332211   123456789


Q ss_pred             cCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHH-HHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCC
Q 048594          185 MAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGT-LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN  262 (483)
Q Consensus       185 ~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  262 (483)
                      +|||++.+..++.++||||+||++|+|++ |..||.+...... ...+..+.. .  ......++.+.++|.+||..||.
T Consensus       243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~li~~cl~~dp~  319 (338)
T cd05102         243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTR-M--RAPENATPEIYRIMLACWQGDPK  319 (338)
T ss_pred             cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCC-C--CCCCCCCHHHHHHHHHHccCChh
Confidence            99999988889999999999999999997 9999987554333 333333322 1  12246789999999999999999


Q ss_pred             CCCCHHHHHc
Q 048594          263 NQITVAQILK  272 (483)
Q Consensus       263 ~R~t~~e~L~  272 (483)
                      +|||+.++++
T Consensus       320 ~RPs~~el~~  329 (338)
T cd05102         320 ERPTFSALVE  329 (338)
T ss_pred             hCcCHHHHHH
Confidence            9999999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=3.8e-36  Score=294.35  Aligned_cols=227  Identities=29%  Similarity=0.507  Sum_probs=190.9

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------cCeEEE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------EGYLKR   95 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------~~~lv~   95 (483)
                      ....+|++.+.||.|++|.||+|.+..+|+.+|+|.+.......                              ..|+|+
T Consensus        16 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   95 (296)
T cd06655          16 DPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM   95 (296)
T ss_pred             CCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence            44567999999999999999999999999999999986543211                              119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      ||+.|++|.+++... .+++..+..++.||+.||.|||+.|++|+||+|+||++   +.++.++|+|||.+........ 
T Consensus        96 e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili---~~~~~~kl~dfg~~~~~~~~~~~  171 (296)
T cd06655          96 EYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITPEQSK  171 (296)
T ss_pred             EecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccchhccccccc
Confidence            999999999988654 68999999999999999999999999999999999999   5677899999999876543322 


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .....+++.|+|||.+.+..++.++|+||+||++|+|++|..||.+.........+...... .......+++.+.++|.
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~  250 (296)
T cd06655         172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSPIFRDFLN  250 (296)
T ss_pred             CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc-ccCCcccCCHHHHHHHH
Confidence            22346888999999998888899999999999999999999999887766555555433221 11223467899999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcCC
Q 048594          255 RMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +||..+|.+|||+.+++.||||+
T Consensus       251 ~~l~~dp~~Rpt~~~il~~~~~~  273 (296)
T cd06655         251 RCLEMDVEKRGSAKELLQHPFLK  273 (296)
T ss_pred             HHhhcChhhCCCHHHHhhChHhh
Confidence            99999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=2.9e-36  Score=293.05  Aligned_cols=223  Identities=29%  Similarity=0.450  Sum_probs=179.2

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E~   97 (483)
                      +|.+.+.||+|++|.||+|.++.+|..||+|.+.......                                ..|+|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4899999999999999999999999999999987543211                                11999999


Q ss_pred             cCCCChHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-
Q 048594           98 CDGGTLVDRISDR---ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-  173 (483)
Q Consensus        98 ~~g~~L~~~l~~~---~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-  173 (483)
                      +.+ +|.+++...   ..+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||++....... 
T Consensus        81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~  156 (285)
T cd07861          81 LSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI---DNKGVIKLADFGLARAFGIPVR  156 (285)
T ss_pred             CCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---cCCCcEEECcccceeecCCCcc
Confidence            985 888887643   568999999999999999999999999999999999999   567889999999987654221 


Q ss_pred             eecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC----------------
Q 048594          174 VYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID----------------  236 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~----------------  236 (483)
                      ......+++.|+|||.+.+. .++.++|+||+||++|+|++|++||.+.........+......                
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
T cd07861         157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK  236 (285)
T ss_pred             cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence            22334678899999988653 4688999999999999999999999876654433332211000                


Q ss_pred             ---------CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 ---------FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 ---------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                               ........++++++++|.+||+.||.+|||+.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         237 NTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             hhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence                     0011134578999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=3.4e-36  Score=296.44  Aligned_cols=226  Identities=27%  Similarity=0.418  Sum_probs=185.6

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------------cCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------------EGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~l   93 (483)
                      .++|.+.+.||+|++|.||+|.++.+|..||+|.+.......                                  ..|+
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            457999999999999999999999999999999986432111                                  1289


Q ss_pred             EEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |+||+.+ +|.+++... ..+++..+..++.||+.||.|||+.|++|+||+|+||++   +..+.++|+|||.+......
T Consensus        86 v~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~kL~dfg~~~~~~~~  161 (309)
T cd07845          86 VMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL---TDKGCLKIADFGLARTYGLP  161 (309)
T ss_pred             EEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccceeeecCCc
Confidence            9999976 788888753 679999999999999999999999999999999999999   56779999999999876533


Q ss_pred             -ceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc---------------
Q 048594          173 -KVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI---------------  235 (483)
Q Consensus       173 -~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~---------------  235 (483)
                       .......+++.|+|||.+.+ ..++.++|+||+||++|+|++|.+||.+.+....+..+.....               
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (309)
T cd07845         162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL  241 (309)
T ss_pred             cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence             22223345788999998865 4578999999999999999999999998887777666654211               


Q ss_pred             ----CCCCCC-------CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          236 ----DFKSDP-------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       236 ----~~~~~~-------~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                          ..+..+       ++..++++.+||.+||++||++|||+.+++.||||.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~  294 (309)
T cd07845         242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK  294 (309)
T ss_pred             cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence                011111       123588899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=5.3e-36  Score=292.41  Aligned_cols=229  Identities=26%  Similarity=0.431  Sum_probs=187.1

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------C-------------------C
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------S-------------------D   89 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------~-------------------~   89 (483)
                      .+..++|.+.+.||+|+||.||+|.++.+++.+|+|++.....                .                   .
T Consensus        18 ~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   97 (291)
T cd06639          18 GDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG   97 (291)
T ss_pred             CCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence            3557889999999999999999999999999999999864320                0                   1


Q ss_pred             cCeEEEeccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           90 EGYLKREHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                      ..|+|+||+.|++|.+++..    ..++++..+..++.||+.||+|||+.+++|+||+|+||++   +..+.++|+|||.
T Consensus        98 ~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili---~~~~~~kl~dfg~  174 (291)
T cd06639          98 QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL---TTEGGVKLVDFGV  174 (291)
T ss_pred             eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEeeccc
Confidence            13899999999999998753    4578999999999999999999999999999999999999   5667899999999


Q ss_pred             ceeccCCc-eecccccCCcccCccccCCC-----CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC
Q 048594          166 AFFFEEGK-VYEEVVGTPLYMAPELLGPC-----KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS  239 (483)
Q Consensus       166 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (483)
                      +....... ......|++.|+|||.+...     .++.++|+||+||++|+|++|++||...........+........ 
T Consensus       175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-  253 (291)
T cd06639         175 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTL-  253 (291)
T ss_pred             chhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCC-
Confidence            87654322 12345678899999987543     357899999999999999999999987766555555544322211 


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ......+..+.++|.+||+.+|.+||++.++++||||+
T Consensus       254 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         254 LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            11234678899999999999999999999999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.6e-36  Score=292.12  Aligned_cols=225  Identities=25%  Similarity=0.394  Sum_probs=183.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------cCeEEEec
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------EGYLKREH   97 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------~~~lv~E~   97 (483)
                      ..+|.+.+.||+|+||.||+|.++.+++.+|+|++.......                              ..|+|+||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            457999999999999999999999999999999987543111                              11899999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-eec
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYE  176 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~~  176 (483)
                      +.+++|.+++...+++++..+..++.|++.||.|||+.+|+|+||+|+||++   +.++.++|+|||.+....... ...
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~~~~~~  164 (267)
T cd06646          88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL---TDNGDVKLADFGVAAKITATIAKRK  164 (267)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEECcCccceeecccccccC
Confidence            9999999999888889999999999999999999999999999999999999   567789999999998654322 223


Q ss_pred             ccccCCcccCccccC---CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC-CCCCCCHHHHHH
Q 048594          177 EVVGTPLYMAPELLG---PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD-PWPTISSSAKDL  252 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~l  252 (483)
                      ...|++.|+|||.+.   ...++.++|+||+||++|+|++|..||...........+.......+.. ....++..+.+|
T Consensus       165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  244 (267)
T cd06646         165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNF  244 (267)
T ss_pred             ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHH
Confidence            456888999999874   3346789999999999999999999996554333332222222221111 123468899999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCc
Q 048594          253 IRRMLIRDPNNQITVAQILKHPW  275 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~  275 (483)
                      |.+||..+|.+|||++++|+|+|
T Consensus       245 i~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         245 VKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHHhhCChhhCcCHHHHhcCCC
Confidence            99999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.3e-36  Score=294.14  Aligned_cols=226  Identities=27%  Similarity=0.414  Sum_probs=182.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E~   97 (483)
                      ++|++++.||+|+||.||+|.++.+|..+|+|.+......                               ...|+|+||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            4689999999999999999999999999999988653210                               111999999


Q ss_pred             cCCCChHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           98 CDGGTLVDRISDR---ERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        98 ~~g~~L~~~l~~~---~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |+|++|.+++...   ..+++..+..++.||+.||.|||+ .+++|+||+|+||++   +.++.++|+|||.+..+... 
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~-  156 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLV---NGNGQVKLCDFGVSGNLVAS-  156 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEE---CCCCCEEEeecCCcccccCC-
Confidence            9999999988763   379999999999999999999997 599999999999999   56778999999998765332 


Q ss_pred             eecccccCCcccCccccCCCC------CCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          174 VYEEVVGTPLYMAPELLGPCK------YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      ......+++.|+|||.+.+..      ++.++|+||+||++|+|++|..||...........+.......+....+.++.
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T cd06622         157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSD  236 (286)
T ss_pred             ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCH
Confidence            223456788999999985433      47899999999999999999999976554443333222111111222345889


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      ++.+||.+||+.+|.+||++.+++.||||..
T Consensus       237 ~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~  267 (286)
T cd06622         237 DAQDFVAKCLNKIPNRRPTYAQLLEHPWLVK  267 (286)
T ss_pred             HHHHHHHHHcccCcccCCCHHHHhcChhhhh
Confidence            9999999999999999999999999999973

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=3.1e-36  Score=292.88  Aligned_cols=224  Identities=31%  Similarity=0.530  Sum_probs=184.5

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------CeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~lv~E~   97 (483)
                      +|.+.+.||.|++|.||+|.+..+|..+|+|++........                                .|+|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            58999999999999999999999999999999976542111                                1899999


Q ss_pred             cCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--e
Q 048594           98 CDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--V  174 (483)
Q Consensus        98 ~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--~  174 (483)
                      + |++|.+++.. ..++++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||.+.......  .
T Consensus        81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~~~  156 (286)
T cd07832          81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLI---SADGVLKIADFGLARLFSEEEPRL  156 (286)
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEE---cCCCcEEEeeeeecccccCCCCCc
Confidence            9 9999999865 4679999999999999999999999999999999999999   567889999999988765432  2


Q ss_pred             ecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-----------------
Q 048594          175 YEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-----------------  236 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----------------  236 (483)
                      .....++..|+|||.+.+. .++.++||||+|+++++|++|.+||.+......+..+......                 
T Consensus       157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T cd07832         157 YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNK  236 (286)
T ss_pred             cccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhc
Confidence            3445789999999988654 4688999999999999999999888877665555544431110                 


Q ss_pred             --CCC-------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          237 --FKS-------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       237 --~~~-------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                        ++.       ..++..+..+.++|.+||..+|.+|||++++|.||||.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         237 ITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             ccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence              000       01235678999999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.2e-36  Score=306.48  Aligned_cols=228  Identities=24%  Similarity=0.396  Sum_probs=182.0

Q ss_pred             ccccceEEeeeecccCceeEEEEEEC--CCCCEEEEEEeccCCC-------------------------CCcCeEEEecc
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTEN--STGLQFACKSISKTSK-------------------------SDEGYLKREHC   98 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~-------------------------~~~~~lv~E~~   98 (483)
                      .+..+|.+++.||.|+||.||+|...  .++..+|+|.+.....                         ....|+|||++
T Consensus        89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~  168 (392)
T PHA03207         89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKY  168 (392)
T ss_pred             hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhc
Confidence            45568999999999999999999764  4568899999865431                         01128999999


Q ss_pred             CCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce---e
Q 048594           99 DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV---Y  175 (483)
Q Consensus        99 ~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~---~  175 (483)
                      . ++|.+++....++++..+..++.||+.||.|||++||+||||||+|||+   +..+.++|+|||++..+.....   .
T Consensus       169 ~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill---~~~~~~~l~DfG~a~~~~~~~~~~~~  244 (392)
T PHA03207        169 K-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL---DEPENAVLGDFGAACKLDAHPDTPQC  244 (392)
T ss_pred             C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEccCccccccCcccccccc
Confidence            6 4899999777889999999999999999999999999999999999999   6778999999999876543221   2


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh---HHHHHHHHc----cccCCCC---------
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL---YGTLTAIMS----REIDFKS---------  239 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~---~~~~~~i~~----~~~~~~~---------  239 (483)
                      ....||+.|+|||++.+..++.++||||+||++|+|++|..||.+...   ...+..+..    ....++.         
T Consensus       245 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~  324 (392)
T PHA03207        245 YGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKH  324 (392)
T ss_pred             cccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHH
Confidence            245789999999999988899999999999999999999999977542   122222221    1111110         


Q ss_pred             ---------CC--C------CCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          240 ---------DP--W------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       240 ---------~~--~------~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                               ++  .      ..++.++++||.+||..||.+|||+.++|.||||.
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~  379 (392)
T PHA03207        325 FKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFT  379 (392)
T ss_pred             HHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence                     00  0      13467899999999999999999999999999997

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=4.8e-36  Score=288.67  Aligned_cols=221  Identities=27%  Similarity=0.462  Sum_probs=186.4

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------------c
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------------E   90 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------------~   90 (483)
                      +|.+.+.||.|++|.||+|.+..++..+|+|.+.......                                       .
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            4888999999999999999999999999999886543211                                       1


Q ss_pred             CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           91 GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      .++|+||+++++|.+++...+.+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+....
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~---~~~~~~~l~dfg~~~~~~  157 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV---DNKGGIKISDFGISKKLE  157 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE---cCCCCEEecccCCCcccc
Confidence            18999999999999999888889999999999999999999999999999999999999   677889999999987664


Q ss_pred             CCc-------eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCC
Q 048594          171 EGK-------VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       171 ~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  243 (483)
                      ...       ......|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...........+.....   .....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~  234 (267)
T cd06628         158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS---PEIPS  234 (267)
T ss_pred             cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC---CcCCc
Confidence            211       11224578899999999888889999999999999999999999987665555554444211   11224


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .++..+.++|.+||+++|.+||++.++++||||
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         235 NISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             ccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=5e-36  Score=294.74  Aligned_cols=225  Identities=29%  Similarity=0.509  Sum_probs=191.0

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~   95 (483)
                      +.|.+.+.||+|+||.||++.++.+++.||+|.+......                                 ...|+||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            3699999999999999999999999999999998754310                                 0118999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--  173 (483)
                      ||++|++|.+++...+++++..+..++.|++.||.|||+++++|+||+|.||++   +..+.++|+|||.+.......  
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll---~~~~~~~l~dfg~~~~~~~~~~~  157 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKIGLMSLTT  157 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE---CCCCCEEEeeCCCccccCcCccc
Confidence            999999999999888899999999999999999999999999999999999999   567889999999886421000  


Q ss_pred             --------------eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC
Q 048594          174 --------------VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS  239 (483)
Q Consensus       174 --------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (483)
                                    ......++..|+|||.+.+..++.++|+||+|+++|+|++|..||.+.........+.......+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  237 (305)
T cd05609         158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE  237 (305)
T ss_pred             cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC
Confidence                          001235678899999998878899999999999999999999999988777777777666544443


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCC---HHHHHcCCcCC
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQIT---VAQILKHPWLN  277 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t---~~e~L~h~~~~  277 (483)
                      .. +.++.++.++|.+||+.+|.+||+   +.++|.||||.
T Consensus       238 ~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~  277 (305)
T cd05609         238 GD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFL  277 (305)
T ss_pred             cc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCcccc
Confidence            32 367899999999999999999998   78999999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=4.4e-36  Score=287.86  Aligned_cols=221  Identities=30%  Similarity=0.505  Sum_probs=189.5

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------------cCeEEE
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------------EGYLKR   95 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~lv~   95 (483)
                      +|.+.+.||.|++|.||+|.+..+|..+|+|.+.......                                  ..|+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            4889999999999999999999999999999986532110                                  018999


Q ss_pred             eccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           96 EHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACH-----SNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        96 E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH-----~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                      ||+++++|.+++..    ..++++..+..++.||+.||.|||     +.+++|+||+|+||++   +..+.++|+|||.+
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili---~~~~~~kl~d~g~~  157 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFL---DANNNVKLGDFGLA  157 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEE---ecCCCEEEeccccc
Confidence            99999999999865    367999999999999999999999     8899999999999999   56789999999999


Q ss_pred             eeccCCce-ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCC
Q 048594          167 FFFEEGKV-YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       167 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      ........ .....+++.|+|||.+.+..++.++|+||||+++++|++|..||...........+.......   ....+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~  234 (265)
T cd08217         158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRR---IPYRY  234 (265)
T ss_pred             ccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCC---Ccccc
Confidence            87654432 334578999999999988888999999999999999999999998887666666666554321   12367


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      +..+.+++.+||..+|.+|||+.++++|||+
T Consensus       235 ~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         235 SSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            8999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=3.2e-36  Score=288.53  Aligned_cols=220  Identities=30%  Similarity=0.477  Sum_probs=187.5

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCeEEEe
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGYLKRE   96 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~lv~E   96 (483)
                      .|.+.+.||.|+||.||+|.++.++..+|+|.+.+.....                                 ..|+|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            4899999999999999999999999999999997543111                                 1199999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE  176 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~  176 (483)
                      |+.|++|.+++....++++..+..++.||+.||.|||+++++|+||+|+||++   +..+.++|+|||.+..........
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~---~~~~~~~l~d~~~~~~~~~~~~~~  157 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL---DEQGHVHITDFNIATKVTPDTLTT  157 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---cCCCCEEEeecccccccCCCcccc
Confidence            99999999999887889999999999999999999999999999999999999   567789999999988765544444


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh---HHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL---YGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ...|+..|+|||.+....++.++|+||+|+++|+|++|..||.....   ...........    ....+.++..+.++|
T Consensus       158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i  233 (258)
T cd05578         158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETAD----VLYPATWSTEAIDAI  233 (258)
T ss_pred             ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcccc----ccCcccCcHHHHHHH
Confidence            56788899999999887889999999999999999999999987663   23332222221    122246789999999


Q ss_pred             HHhCccCCCCCCCH--HHHHcCCcC
Q 048594          254 RRMLIRDPNNQITV--AQILKHPWL  276 (483)
Q Consensus       254 ~~~L~~dP~~R~t~--~e~L~h~~~  276 (483)
                      .+||..||.+||++  ++++.||||
T Consensus       234 ~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         234 NKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HHHccCChhHcCCccHHHHhcCCCC
Confidence            99999999999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-37  Score=304.21  Aligned_cols=220  Identities=25%  Similarity=0.428  Sum_probs=188.2

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC---------------------------------eEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG---------------------------------YLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~---------------------------------~lv   94 (483)
                      ...|.-++.||+|+||.||-|.+..+...||||.+.-+-.....                                 ++|
T Consensus        25 Eklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLV  104 (948)
T KOG0577|consen   25 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLV  104 (948)
T ss_pred             HHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHH
Confidence            44577789999999999999999999999999998765422111                                 899


Q ss_pred             EeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ||||-| +-.+++.- .+++.+.+++.|+.+.+.||+|||+.+.||||||..|||+   .+.+.|||+|||.|....+. 
T Consensus       105 MEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL---se~g~VKLaDFGSAsi~~PA-  179 (948)
T KOG0577|consen  105 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL---SEPGLVKLADFGSASIMAPA-  179 (948)
T ss_pred             HHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe---cCCCeeeeccccchhhcCch-
Confidence            999987 77777753 4689999999999999999999999999999999999999   68899999999999887654 


Q ss_pred             eecccccCCcccCccccC---CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc-cCCCCCCCCCCCHHH
Q 048594          174 VYEEVVGTPLYMAPELLG---PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE-IDFKSDPWPTISSSA  249 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~  249 (483)
                        +.++|||.|||||++.   .+.|+-++||||||++..+|...++|+..-+....+..|.... +.+..   +.+|..+
T Consensus       180 --nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs---~eWS~~F  254 (948)
T KOG0577|consen  180 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQS---NEWSDYF  254 (948)
T ss_pred             --hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCC---chhHHHH
Confidence              4679999999999884   4578999999999999999999999998877766666665443 33333   4568899


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +.||..||++-|..|||.+++|+|+|+.
T Consensus       255 ~~Fvd~CLqKipqeRptse~ll~H~fv~  282 (948)
T KOG0577|consen  255 RNFVDSCLQKIPQERPTSEELLKHRFVL  282 (948)
T ss_pred             HHHHHHHHhhCcccCCcHHHHhhcchhc
Confidence            9999999999999999999999999997

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=3.7e-36  Score=301.92  Aligned_cols=226  Identities=27%  Similarity=0.436  Sum_probs=184.6

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------------   88 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------------   88 (483)
                      .+.++|.+.+.||+|++|.||+|.+..+|+.+|+|.+.+....                                     
T Consensus        13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   92 (353)
T cd07850          13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE   92 (353)
T ss_pred             hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence            4678899999999999999999999999999999998642100                                     


Q ss_pred             -CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           89 -DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                       ...|+|+|||.+ +|.+.+...  +++..+..++.||+.||.|||++|++||||||+||++   +.++.++|+|||.+.
T Consensus        93 ~~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~---~~~~~~kL~Dfg~~~  166 (353)
T cd07850          93 FQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR  166 (353)
T ss_pred             cCcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCccce
Confidence             012899999976 888888654  8999999999999999999999999999999999999   667889999999998


Q ss_pred             eccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc------------
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI------------  235 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~------------  235 (483)
                      ............+++.|+|||.+.+..++.++|+||+||++|+|++|..||...+.......+.....            
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (353)
T cd07850         167 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQP  246 (353)
T ss_pred             eCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence            76544333445688999999999888899999999999999999999999987765444444322100            


Q ss_pred             ----------CCCCC-----------------CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          236 ----------DFKSD-----------------PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       236 ----------~~~~~-----------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                .....                 .....+..++++|.+||+.||++|||+.|+|.||||+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~  315 (353)
T cd07850         247 TVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN  315 (353)
T ss_pred             hhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence                      00000                 0113456789999999999999999999999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=3.9e-36  Score=296.00  Aligned_cols=225  Identities=27%  Similarity=0.388  Sum_probs=184.4

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E~   97 (483)
                      ++|.+.+.||+|+||.||++.+..+|..+|+|.+......                               +..|+|+||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            3699999999999999999999999999999998654210                               111899999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE  176 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~  176 (483)
                      ++|++|.+++...+++++..+..++.||+.||.|||+ .+++|+||+|+||++   +.++.++|+|||.+...... ...
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~-~~~  156 (308)
T cd06615          81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS-MAN  156 (308)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEE---ecCCcEEEccCCCccccccc-ccc
Confidence            9999999999888889999999999999999999997 589999999999999   56678999999998765332 224


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCC-------------------
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDF-------------------  237 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------------------  237 (483)
                      ...|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+.......+.......                   
T Consensus       157 ~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (308)
T cd06615         157 SFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRP  236 (308)
T ss_pred             cCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccch
Confidence            4578999999999988788999999999999999999999997655433332222111000                   


Q ss_pred             ---------------CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          238 ---------------KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       238 ---------------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                     +..+...++.++++||.+||..+|++|||+.++++||||.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~  291 (308)
T cd06615         237 MAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIK  291 (308)
T ss_pred             hhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence                           0001123678899999999999999999999999999997

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-37  Score=307.16  Aligned_cols=226  Identities=30%  Similarity=0.467  Sum_probs=191.8

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEEec
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKREH   97 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~E~   97 (483)
                      .+.|.|+..||-|+||.||+|.++.++...|.|+|......                              +..+|..||
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF  110 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF  110 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence            46788999999999999999999999999999998765421                              111899999


Q ss_pred             cCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-Ccee
Q 048594           98 CDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GKVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~~~~  175 (483)
                      |.||-+..++.+ ...+++.++..+++|++.||.|||+++|+|||||..|||++   ..|.|+|+|||++..... -...
T Consensus       111 C~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T---ldGdirLADFGVSAKn~~t~qkR  187 (1187)
T KOG0579|consen  111 CGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT---LDGDIRLADFGVSAKNKSTRQKR  187 (1187)
T ss_pred             cCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE---ecCcEeeecccccccchhHHhhh
Confidence            999988887765 35799999999999999999999999999999999999995   567899999999865432 1223


Q ss_pred             cccccCCcccCcccc-----CCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          176 EEVVGTPLYMAPELL-----GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~-----~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      ..+.|||+|||||+.     ...+|.+++||||||++|.+|..+.+|....+....+-.|....++.... +..++..+.
T Consensus       188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlq-PS~Ws~~F~  266 (1187)
T KOG0579|consen  188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQ-PSHWSRSFS  266 (1187)
T ss_pred             ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccC-cchhhhHHH
Confidence            467899999999986     45689999999999999999999999998888777777776655433222 246788999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +|+.+||.+||..||+++++|+||||.
T Consensus       267 DfLk~cL~Knp~~Rp~aaqll~Hpfv~  293 (1187)
T KOG0579|consen  267 DFLKRCLVKNPRNRPPAAQLLKHPFVQ  293 (1187)
T ss_pred             HHHHHHHhcCCccCCCHHHHhhCcccc
Confidence            999999999999999999999999998

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=3.1e-36  Score=292.68  Aligned_cols=225  Identities=28%  Similarity=0.444  Sum_probs=185.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEEecc
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKREHC   98 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~E~~   98 (483)
                      +.|++.+.||.|+||.||+|.++.++..+|+|.+......                              ...|+|+||+
T Consensus         5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~   84 (282)
T cd06643           5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   84 (282)
T ss_pred             HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence            3478899999999999999999999999999998654311                              0119999999


Q ss_pred             CCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ceec
Q 048594           99 DGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVYE  176 (483)
Q Consensus        99 ~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~~  176 (483)
                      .+++|..++.. ..++++..+..++.||+.||.|||+.|++|+||+|+||++   +.++.++|+|||++...... ....
T Consensus        85 ~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili---~~~~~~kl~dfg~~~~~~~~~~~~~  161 (282)
T cd06643          85 AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRTIQRRD  161 (282)
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---ccCCCEEEccccccccccccccccc
Confidence            99999988764 4679999999999999999999999999999999999999   56778999999998654322 1223


Q ss_pred             ccccCCcccCccccC-----CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          177 EVVGTPLYMAPELLG-----PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      ...+++.|+|||++.     +..++.++|+||+||++|+|++|.+||...+.......+........ .....++.++.+
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  240 (282)
T cd06643         162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL-AQPSRWSSEFKD  240 (282)
T ss_pred             cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC-CCccccCHHHHH
Confidence            456889999999873     34567899999999999999999999988776666666554432211 112357889999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||.+||..+|.+|||+.++++||||.
T Consensus       241 li~~~l~~~p~~Rp~~~~il~~~~~~  266 (282)
T cd06643         241 FLKKCLEKNVDARWTTTQLLQHPFVT  266 (282)
T ss_pred             HHHHHccCChhhCcCHHHHhcCCCEe
Confidence            99999999999999999999999998

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=6.1e-36  Score=287.76  Aligned_cols=222  Identities=24%  Similarity=0.408  Sum_probs=183.9

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------CcCeE
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------DEGYL   93 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------~~~~l   93 (483)
                      +|++.+.||.|+||.||+|... +|..+|+|.+......                                    ...|+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            5889999999999999999874 7889999988643211                                    01199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC--
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE--  171 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~--  171 (483)
                      |+||++|++|.+++.+..++++..+..++.||+.||+|||+.+++|+||+|+||++   +..+.++|+|||.+.....  
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~  156 (265)
T cd06631          80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML---MPNGIIKLIDFGCARRLAWVG  156 (265)
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE---CCCCeEEeccchhhHhhhhcc
Confidence            99999999999999888889999999999999999999999999999999999999   5678899999998875421  


Q ss_pred             -----CceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          172 -----GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       172 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                           ........|+..|+|||.+.+..++.++|+||+|+++|+|++|..||...........+.......+ .....++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  235 (265)
T cd06631         157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMP-RLPDSFS  235 (265)
T ss_pred             ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCC-CCCCCCC
Confidence                 1112234688899999999888889999999999999999999999987665544444443322211 2234678


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .++.+||.+||.++|.+|||+.+++.||||
T Consensus       236 ~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         236 AAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            999999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=2.6e-36  Score=292.46  Aligned_cols=219  Identities=29%  Similarity=0.489  Sum_probs=181.0

Q ss_pred             ecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEEeccCCCCh
Q 048594           57 LCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKREHCDGGTL  103 (483)
Q Consensus        57 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~E~~~g~~L  103 (483)
                      ||+|+||+||+|.++.+|+.||+|.+.+....                                 ...|+|+||++|++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            69999999999999999999999998653211                                 011999999999999


Q ss_pred             HHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccccC
Q 048594          104 VDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT  181 (483)
Q Consensus       104 ~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt  181 (483)
                      .+++....  .+++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||.+.............++
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  157 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRAGT  157 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEccCcchhhhccCCccccccCC
Confidence            99997765  79999999999999999999999999999999999999   66778999999998766543333445678


Q ss_pred             CcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCC
Q 048594          182 PLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP  261 (483)
Q Consensus       182 ~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  261 (483)
                      ..|+|||.+.+..++.++|+||+||++|+|++|..||...........+.......+....+.+++.+.++|.+||+.+|
T Consensus       158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  237 (277)
T cd05577         158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDP  237 (277)
T ss_pred             CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCCh
Confidence            89999999988788999999999999999999999997765422223333322222333334678999999999999999


Q ss_pred             CCCC-----CHHHHHcCCcCCC
Q 048594          262 NNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       262 ~~R~-----t~~e~L~h~~~~~  278 (483)
                      .+||     ++.+++.||||..
T Consensus       238 ~~R~~~~~~~~~~ll~h~~~~~  259 (277)
T cd05577         238 EKRLGCRGGSADEVREHPLFKD  259 (277)
T ss_pred             hHccCCCcccHHHHHhChhhhc
Confidence            9999     8999999999973

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=9e-36  Score=291.16  Aligned_cols=226  Identities=28%  Similarity=0.445  Sum_probs=180.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------c-----
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------E-----   90 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~-----   90 (483)
                      ++|++.+.||+|++|.||+|.+..+|+.||+|.+.......                                 .     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46999999999999999999999999999999876432110                                 0     


Q ss_pred             CeEEEeccCCCChHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           91 GYLKREHCDGGTLVDRISDR-----ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                      .|+|+|||.+ +|.+++...     ..+++..+..++.||+.||.|||+++++||||+|+||+++.  .++.++|+|||.
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~--~~~~~kl~dfg~  157 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK--QKGLLKIADLGL  157 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec--CCCeEEEeeccc
Confidence            2899999987 788888643     35799999999999999999999999999999999999942  267899999999


Q ss_pred             ceeccCC-ceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC-----
Q 048594          166 AFFFEEG-KVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK-----  238 (483)
Q Consensus       166 a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-----  238 (483)
                      +...... .......+++.|+|||.+.+ ..++.++|+||+|+++|+|++|..||.+.........+........     
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (295)
T cd07837         158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWP  237 (295)
T ss_pred             ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCc
Confidence            8765322 22233457889999998865 3568899999999999999999999988766555444332110000     


Q ss_pred             -------------------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          239 -------------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       239 -------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                         ....+.+++++.+||.+||.++|.+|||+.+++.||||+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence                               001245789999999999999999999999999999984

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.2e-35  Score=285.12  Aligned_cols=223  Identities=28%  Similarity=0.480  Sum_probs=184.9

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E~   97 (483)
                      +|.+.+.||+|++|.||+|.+..+++.+|+|.+.......                                ..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            6899999999999999999999999999999987654320                                01999999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce---
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV---  174 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~---  174 (483)
                      +++++|.+++.....+++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||.+........   
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~---~~~~~~kl~d~g~~~~~~~~~~~~~  157 (264)
T cd06626          81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFL---DHNGVIKLGDFGCAVKLKNNTTTMG  157 (264)
T ss_pred             CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEcccccccccCCCCCccc
Confidence            9999999999888789999999999999999999999999999999999999   5678899999999887643322   


Q ss_pred             --ecccccCCcccCccccCCCC---CCCcCchHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHccccCCCCCCCCCCCHH
Q 048594          175 --YEEVVGTPLYMAPELLGPCK---YGKEIDIWSAGLILYNLLSGAQPFWAESLY-GTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       175 --~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslGvil~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                        .....+++.|+|||.+.+..   ++.++|+||+|++++++++|..||...... .....+.. ......+.+..+++.
T Consensus       158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  236 (264)
T cd06626         158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKPPIPDSLQLSPE  236 (264)
T ss_pred             ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCCCCCcccccCHH
Confidence              11346788999999997765   788999999999999999999999765332 22323332 222222233456899


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      +.+||.+||+.+|.+|||+.+++.|||+
T Consensus       237 ~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         237 GKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=5.9e-36  Score=290.56  Aligned_cols=224  Identities=25%  Similarity=0.414  Sum_probs=180.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E   96 (483)
                      ++|.+.+.||+|+||.||+|.++.+|+.||+|.+.......                                ..|+++|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            46999999999999999999999999999999987643111                                1189999


Q ss_pred             ccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           97 HCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        97 ~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |++| +|.+++..    ...+++..+..++.||+.||.|||++ +++||||||+||++   +.++.+||+|||.+.....
T Consensus        81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~---~~~~~~kl~dfg~~~~~~~  156 (283)
T cd06617          81 VMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYLVD  156 (283)
T ss_pred             hhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeeccccccccc
Confidence            9975 78777654    34689999999999999999999997 99999999999999   6678999999999886644


Q ss_pred             CceecccccCCcccCccccCC----CCCCCcCchHHHHHHHHHHhhCCCCCCCC-ChHHHHHHHHccccCCCCCCCCCCC
Q 048594          172 GKVYEEVVGTPLYMAPELLGP----CKYGKEIDIWSAGLILYNLLSGAQPFWAE-SLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ........++..|+|||.+.+    ..++.++|+||+||++|+|++|..||... .....+..+.....  +..+...+|
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  234 (283)
T cd06617         157 SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPS--PQLPAEKFS  234 (283)
T ss_pred             ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCC--CCCCccccC
Confidence            333334568889999998864    34678999999999999999999999643 22333333332211  111123578


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      .++.++|.+||..+|.+|||+.+++.||||..
T Consensus       235 ~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~  266 (283)
T cd06617         235 PEFQDFVNKCLKKNYKERPNYPELLQHPFFEL  266 (283)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCchhhh
Confidence            99999999999999999999999999999983

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=4.4e-36  Score=291.55  Aligned_cols=224  Identities=27%  Similarity=0.437  Sum_probs=183.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------------CCcC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------------SDEG   91 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------------~~~~   91 (483)
                      ...|++.+.||.|+||.||+|.++.+++.+|+|++.....                                    ....
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   94 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL   94 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence            4579999999999999999999999999999999865320                                    0112


Q ss_pred             eEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           92 YLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      |++||||.+++|.+++...  ..+++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||.+...
T Consensus        95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili---~~~~~~~l~dfg~~~~~  171 (282)
T cd06636          95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQL  171 (282)
T ss_pred             EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCcchhhh
Confidence            8999999999999998753  458899999999999999999999999999999999999   56778999999998765


Q ss_pred             cCC-ceecccccCCcccCccccC-----CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCC
Q 048594          170 EEG-KVYEEVVGTPLYMAPELLG-----PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       170 ~~~-~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  243 (483)
                      ... .......|++.|+|||.+.     ...++.++|+||+||++|+|++|..||...........+.....  +.....
T Consensus       172 ~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~  249 (282)
T cd06636         172 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP--PKLKSK  249 (282)
T ss_pred             hccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCC--CCCccc
Confidence            321 1223456889999999875     34577899999999999999999999977655444443333221  111223


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .++.++.+||.+||..||.+|||+.++|+||||
T Consensus       250 ~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         250 KWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             ccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.5e-36  Score=285.55  Aligned_cols=225  Identities=26%  Similarity=0.429  Sum_probs=188.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------cCeEEEec
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------EGYLKREH   97 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------~~~lv~E~   97 (483)
                      .++|.+.+.||.|++|.||+|.++.++..+|+|++.......                              ..|++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            357999999999999999999999999999999987653211                              11899999


Q ss_pred             cCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-ee
Q 048594           98 CDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~  175 (483)
                      +.+++|.+++... .++++..+..++.|++.||.|||+++++|+||+|+||++   +..+.++|+|||.+....... ..
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~~~  158 (262)
T cd06613          82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL---TEDGDVKLADFGVSAQLTATIAKR  158 (262)
T ss_pred             CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEE---CCCCCEEECccccchhhhhhhhcc
Confidence            9999999999776 789999999999999999999999999999999999999   567789999999987654322 22


Q ss_pred             cccccCCcccCccccCCC---CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC-CCCCCCCHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPC---KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS-DPWPTISSSAKD  251 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~  251 (483)
                      ....++..|+|||.+.+.   .++.++|+||+|+++|+|++|..||...........+....+..+. ...+.++.++.+
T Consensus       159 ~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (262)
T cd06613         159 KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHD  238 (262)
T ss_pred             ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHH
Confidence            345688899999998776   7888999999999999999999999887765555555444222211 112346788999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCc
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPW  275 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~  275 (483)
                      ||.+||..+|..|||+.+++.|+|
T Consensus       239 li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         239 FIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHHHHcCCChhhCCCHHHHhcCCC
Confidence            999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=9.2e-36  Score=289.78  Aligned_cols=231  Identities=26%  Similarity=0.437  Sum_probs=185.9

Q ss_pred             ccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------
Q 048594           42 KAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------   87 (483)
Q Consensus        42 ~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------   87 (483)
                      .......++|.+.+.||+|++|.||+|.++.+++.+|+|++.....                                  
T Consensus        11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   90 (286)
T cd06638          11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK   90 (286)
T ss_pred             ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence            3455678899999999999999999999999999999999764221                                  


Q ss_pred             -CCcCeEEEeccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEee
Q 048594           88 -SDEGYLKREHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD  162 (483)
Q Consensus        88 -~~~~~lv~E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~D  162 (483)
                       ....|+||||++|++|.+++..    ...+++..+..++.||+.||.|||+++++||||+|+||++   +.++.++|+|
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~kl~d  167 (286)
T cd06638          91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILL---TTEGGVKLVD  167 (286)
T ss_pred             CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEE---CCCCCEEEcc
Confidence             0112899999999999988752    3568999999999999999999999999999999999999   5667899999


Q ss_pred             cccceeccCCc-eecccccCCcccCccccCC-----CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC
Q 048594          163 FGLAFFFEEGK-VYEEVVGTPLYMAPELLGP-----CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID  236 (483)
Q Consensus       163 fg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~  236 (483)
                      ||.+....... ......|++.|+|||++..     ..++.++|+||+||++|+|++|..||...........+......
T Consensus       168 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~  247 (286)
T cd06638         168 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPP  247 (286)
T ss_pred             CCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCC
Confidence            99988764322 2234468999999998753     34788999999999999999999999876554444333222111


Q ss_pred             CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                       ........+..+.++|.+||+.+|.+|||+.++++|+||
T Consensus       248 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         248 -TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             -cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence             111112357889999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=6.4e-36  Score=298.11  Aligned_cols=228  Identities=30%  Similarity=0.466  Sum_probs=182.3

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------------   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------------   89 (483)
                      ++.++|.+.+.||+|++|.||+|+++.+|+.||+|.+.......                                    
T Consensus         2 ~~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   81 (336)
T cd07849           2 DVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN   81 (336)
T ss_pred             ccccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence            35678999999999999999999999999999999986421100                                    


Q ss_pred             cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           90 EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ..|+|+||+.+ +|.+.+.. .++++..+..++.||+.||.|||+.|++||||||+||++   +..+.++|+|||++...
T Consensus        82 ~~~lv~e~~~~-~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~  156 (336)
T cd07849          82 DVYIVQELMET-DLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLARIA  156 (336)
T ss_pred             eEEEEehhccc-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEECcccceeec
Confidence            12899999976 88887754 479999999999999999999999999999999999999   67788999999998765


Q ss_pred             cCCce----ecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc---------
Q 048594          170 EEGKV----YEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI---------  235 (483)
Q Consensus       170 ~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~---------  235 (483)
                      .....    .....|++.|+|||.+.+ ..++.++|+||+||++|+|++|++||.+.+.......+.....         
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (336)
T cd07849         157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNC  236 (336)
T ss_pred             cccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence            43221    123568899999998654 4578899999999999999999999987665443333221000         


Q ss_pred             -------------CC-CCC----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          236 -------------DF-KSD----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       236 -------------~~-~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                   .. ...    ..+..++++.++|.+||+.+|.+|||+.+++.||||+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~  297 (336)
T cd07849         237 IISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ  297 (336)
T ss_pred             hhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence                         00 000    12456788999999999999999999999999999983

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=8.1e-36  Score=291.29  Aligned_cols=226  Identities=27%  Similarity=0.426  Sum_probs=185.5

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEEec
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKREH   97 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~E~   97 (483)
                      .+.|++++.||+|++|.||+|.++.++..+|+|.+......                              ...|+||||
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   90 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF   90 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence            35799999999999999999999999999999998764311                              111999999


Q ss_pred             cCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-cee
Q 048594           98 CDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~  175 (483)
                      +.|++|..++.+ ...+++..+..++.||+.+|.|||+.+++|+||+|+||++   +.++.++|+|||.+...... ...
T Consensus        91 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~~~~~~~  167 (292)
T cd06644          91 CPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL---TLDGDIKLADFGVSAKNVKTLQRR  167 (292)
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE---cCCCCEEEccCccceecccccccc
Confidence            999999888754 4578999999999999999999999999999999999999   56778999999988754322 122


Q ss_pred             cccccCCcccCccccC-----CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          176 EEVVGTPLYMAPELLG-----PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      ....+++.|+|||.+.     ...++.++|+||+||++|+|++|.+||...+.......+....... ......++.++.
T Consensus       168 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  246 (292)
T cd06644         168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT-LSQPSKWSMEFR  246 (292)
T ss_pred             ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCcc-CCCCcccCHHHH
Confidence            3456888999999884     3346789999999999999999999998766555555544332211 112245788999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ++|.+||..+|++||++.++++||||.
T Consensus       247 ~li~~~l~~~p~~Rp~~~~il~~~~~~  273 (292)
T cd06644         247 DFLKTALDKHPETRPSAAQLLEHPFVS  273 (292)
T ss_pred             HHHHHHhcCCcccCcCHHHHhcCcccc
Confidence            999999999999999999999999997

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=1e-35  Score=286.46  Aligned_cols=223  Identities=25%  Similarity=0.452  Sum_probs=182.9

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------------CcC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------------DEG   91 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------------~~~   91 (483)
                      ..|.+.+.||+|++|.||+|.+..+|..+|+|.+......                                     ...
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            3588999999999999999999999999999988643210                                     111


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+++||+++++|.+++.....+++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||++..+..
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~---~~~~~~~l~dfg~~~~~~~  158 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQT  158 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCCCcccccc
Confidence            7899999999999999888889999999999999999999999999999999999999   5677899999999876532


Q ss_pred             C----ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          172 G----KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       172 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      .    .......++..|+|||.+.+..++.++|+||+||++|+|++|..||...........+......  ......+++
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~  236 (266)
T cd06651         159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTN--PQLPSHISE  236 (266)
T ss_pred             ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCC--CCCchhcCH
Confidence            1    1122345788999999998888899999999999999999999999776554444443322211  111234678


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .++++| +||..+|.+|||++++++||||+
T Consensus       237 ~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         237 HARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence            899999 67778999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=8.4e-36  Score=287.01  Aligned_cols=226  Identities=24%  Similarity=0.385  Sum_probs=183.4

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------CcCeE
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------DEGYL   93 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------~~~~l   93 (483)
                      .|+..+.||+|++|.||++.+..+++.+|+|++......                                    +..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            478899999999999999999999999999999754311                                    01199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |+||+.|++|.+++.+.+++++..+..++.||+.||.|||++|++|+||+|+||++..  ....++|+|||.+.......
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~--~~~~~~l~dfg~~~~~~~~~  158 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS--TGQRLRIADFGAAARLAAKG  158 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEccccccccccccc
Confidence            9999999999999988889999999999999999999999999999999999999942  22469999999987664321


Q ss_pred             e-----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc-CCCCCCCCCCCH
Q 048594          174 V-----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI-DFKSDPWPTISS  247 (483)
Q Consensus       174 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~  247 (483)
                      .     .....++..|+|||.+.+..++.++|+||+|+++++|++|..||...........+..... .......+.+++
T Consensus       159 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (268)
T cd06630         159 TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSP  238 (268)
T ss_pred             ccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCH
Confidence            1     1234678899999999887889999999999999999999999975443332222222111 111222245789


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ++.+++.+||..+|.+|||+.++++||||+
T Consensus       239 ~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         239 GLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            999999999999999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=7e-36  Score=297.94  Aligned_cols=228  Identities=29%  Similarity=0.447  Sum_probs=185.2

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------------   88 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------------   88 (483)
                      .+.++|.+.+.||+|++|+||+|++..+|..||||.+......                                     
T Consensus         2 ~~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~   81 (337)
T cd07858           2 EVDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAF   81 (337)
T ss_pred             ccccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccccccc
Confidence            3567899999999999999999999999999999998643100                                     


Q ss_pred             CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           89 DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        89 ~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      ...|+|+||+. ++|.+++...+++++..+..++.||+.||.|||+++++|+||+|+||++   +.++.+||+|||++..
T Consensus        82 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~  157 (337)
T cd07858          82 NDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL---NANCDLKICDFGLART  157 (337)
T ss_pred             CcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECcCccccc
Confidence            01289999996 5899999888899999999999999999999999999999999999999   5677899999999986


Q ss_pred             ccCC-ceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcc-------------
Q 048594          169 FEEG-KVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR-------------  233 (483)
Q Consensus       169 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~-------------  233 (483)
                      .... .......++..|+|||.+.. ..++.++|+||+||++|+|++|.+||.+.+.......+...             
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (337)
T cd07858         158 TSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIR  237 (337)
T ss_pred             cCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcC
Confidence            5433 22234567889999998764 45789999999999999999999999776543322222110             


Q ss_pred             ----------ccCCC----CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          234 ----------EIDFK----SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       234 ----------~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                ....+    ...++.+++++.++|.+||+.+|.+|||++++++||||.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~  295 (337)
T cd07858         238 NEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLA  295 (337)
T ss_pred             chhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchh
Confidence                      00000    011346789999999999999999999999999999997

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=8.4e-36  Score=289.26  Aligned_cols=215  Identities=27%  Similarity=0.449  Sum_probs=177.9

Q ss_pred             eecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------CcCeEEEeccC
Q 048594           56 ELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------DEGYLKREHCD   99 (483)
Q Consensus        56 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------~~~~lv~E~~~   99 (483)
                      .||+|+||.||+|.+..+++.||+|.+.+....                                    +..|+|+||+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            489999999999999999999999998653211                                    01189999999


Q ss_pred             CCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccc
Q 048594          100 GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV  179 (483)
Q Consensus       100 g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~  179 (483)
                      |++|.+++...+.+++..+..++.|++.||.|||+.+++||||+|+||++   +.++.++|+|||.+....... .....
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili---~~~~~~kl~dfg~~~~~~~~~-~~~~~  156 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKK-PHASV  156 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE---CCCCCEEEccCcCccccCccC-CcCcC
Confidence            99999999888889999999999999999999999999999999999999   567789999999987654322 23457


Q ss_pred             cCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCC---hHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          180 GTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAES---LYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       180 gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      |+..|+|||.+.+. .++.++|+||+|+++|+|++|..||....   .......+......    .....+.++.++|.+
T Consensus       157 ~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~s~~~~~li~~  232 (278)
T cd05606         157 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE----LPDSFSPELRSLLEG  232 (278)
T ss_pred             CCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCC----CCCcCCHHHHHHHHH
Confidence            89999999998743 57899999999999999999999997763   22222222222222    123568999999999


Q ss_pred             hCccCCCCCC-----CHHHHHcCCcCCC
Q 048594          256 MLIRDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       256 ~L~~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      ||..+|.+||     ++.++++||||+.
T Consensus       233 ~l~~~p~~R~~~~~~~~~~ll~~~~~~~  260 (278)
T cd05606         233 LLQRDVNRRLGCLGRGAQEVKEHPFFRS  260 (278)
T ss_pred             HhhcCHHhccCCCCCCHHHHHhCccccC
Confidence            9999999999     9999999999983

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=1e-35  Score=289.28  Aligned_cols=225  Identities=28%  Similarity=0.458  Sum_probs=183.6

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E   96 (483)
                      ++|.+.+.||+|++|.||+|.++.+++.+|+|.+.......                                ..|+|+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46999999999999999999999999999999986543211                                1199999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-ee
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~  175 (483)
                      |+.++.|.++......+++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||++..+.... ..
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~~~  157 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEVY  157 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCcEEEEeeeeeeeccCCcccc
Confidence            99998888887776779999999999999999999999999999999999999   567899999999987654332 22


Q ss_pred             cccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC------------------
Q 048594          176 EEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID------------------  236 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~------------------  236 (483)
                      ....++..|+|||.+.+. .++.++||||+|+++++|++|.+||...........+......                  
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07846         158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM  237 (286)
T ss_pred             CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcc
Confidence            345678899999988653 4678899999999999999999999876654444333321100                  


Q ss_pred             -CCC--------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 -FKS--------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 -~~~--------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                       .+.        ..++.++..+.+|+.+||..+|.+|||+.++++||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         238 RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             ccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence             000        1134678899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.2e-35  Score=286.73  Aligned_cols=224  Identities=25%  Similarity=0.457  Sum_probs=184.5

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------------CC
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------------SD   89 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------------~~   89 (483)
                      +|.+.+.||.|++|.||+|.++.+|+.+|+|.+.....                                        ..
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            58899999999999999999999999999998754210                                        01


Q ss_pred             cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           90 EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ..|+|+||+.|++|.+++...+++++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+...
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~---~~~~~~~l~d~~~~~~~  158 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DADGICKISDFGISKKS  158 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE---cCCCeEEEeeccccccc
Confidence            118999999999999999888899999999999999999999999999999999999999   67789999999998764


Q ss_pred             cCCc---eecccccCCcccCccccCCCC--CCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc--cCCCCCCC
Q 048594          170 EEGK---VYEEVVGTPLYMAPELLGPCK--YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE--IDFKSDPW  242 (483)
Q Consensus       170 ~~~~---~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~  242 (483)
                      ....   ......|+..|+|||.+....  ++.++|+||+|++++++++|..||...........+....  ..++....
T Consensus       159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (272)
T cd06629         159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVS  238 (272)
T ss_pred             cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCcccc
Confidence            3211   122346788999999987644  7889999999999999999999997655544444333222  22233333


Q ss_pred             CCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       243 ~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      +.++.++.++|.+||.++|.+|||+.++|+|||+
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         239 MNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             ccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            5678999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=8.3e-36  Score=289.35  Aligned_cols=219  Identities=25%  Similarity=0.383  Sum_probs=179.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E~   97 (483)
                      ++|.+.+.||+|++|.||+|.+..+++.+|+|++.......                               ..++|+||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            36889999999999999999999999999999987542110                               01899999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecc
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE  177 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~  177 (483)
                      +++++|..+    ..+++..+..++.||+.||.|||+.+|+|+||||+||++   +.++.++|+|||++...... ....
T Consensus        81 ~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill---~~~~~~~l~dfg~~~~~~~~-~~~~  152 (279)
T cd06619          81 MDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV---NTRGQVKLCDFGVSTQLVNS-IAKT  152 (279)
T ss_pred             CCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE---CCCCCEEEeeCCcceecccc-cccC
Confidence            999988655    367899999999999999999999999999999999999   66789999999998765433 2334


Q ss_pred             cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh-------HHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          178 VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL-------YGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      ..|++.|+|||.+.+..++.++|+||+|+++|+|++|..||.....       ......+.....  +..+....++++.
T Consensus       153 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  230 (279)
T cd06619         153 YVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP--PVLPVGQFSEKFV  230 (279)
T ss_pred             CCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC--CCCCCCcCCHHHH
Confidence            5789999999999888899999999999999999999999965321       112222222211  1112345788999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ++|.+||+.+|.+||+++++++||||.
T Consensus       231 ~li~~~l~~~P~~Rp~~~eil~~~~~~  257 (279)
T cd06619         231 HFITQCMRKQPKERPAPENLMDHPFIV  257 (279)
T ss_pred             HHHHHHhhCChhhCCCHHHHhcCcccc
Confidence            999999999999999999999999998

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=1.9e-35  Score=311.39  Aligned_cols=306  Identities=21%  Similarity=0.283  Sum_probs=202.7

Q ss_pred             ccceEEeeeecccCceeEEEEEECCC----CCEEEEEEeccCC--------------------------------CCCcC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENST----GLQFACKSISKTS--------------------------------KSDEG   91 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~~avK~~~~~~--------------------------------~~~~~   91 (483)
                      .++|.+.+.||+|+||.||+|.+..+    +..||+|.+....                                .....
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDEY  210 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCce
Confidence            46899999999999999999999998    9999999875421                                12234


Q ss_pred             eEEEeccCCCChHHHHhcCCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee
Q 048594           92 YLKREHCDGGTLVDRISDRER--------------------YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT  151 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~--------------------l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~  151 (483)
                      ++|+||+.+++|.+++.....                    ..+..+..++.||+.||.|||+++|+||||||+|||++ 
T Consensus       211 ~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~-  289 (566)
T PLN03225        211 WLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFS-  289 (566)
T ss_pred             EEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEe-
Confidence            999999999999999875421                    12345678999999999999999999999999999994 


Q ss_pred             CCCCCcEEEeecccceeccCCc--eecccccCCcccCccccCCC----------------------CCCCcCchHHHHHH
Q 048594          152 DDENATLKATDFGLAFFFEEGK--VYEEVVGTPLYMAPELLGPC----------------------KYGKEIDIWSAGLI  207 (483)
Q Consensus       152 ~~~~~~ikl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~DiwslGvi  207 (483)
                       ...+.+||+|||++..+..+.  .....++++.|+|||.+...                      .++.++||||+||+
T Consensus       290 -~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGvi  368 (566)
T PLN03225        290 -EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLI  368 (566)
T ss_pred             -CCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHH
Confidence             235689999999998654322  22456789999999965322                      23446699999999


Q ss_pred             HHHHhhCCCCCCCCChHHHHHH-HHccccCC-------CCC----------CCCCCCHHHHHHHHHhCccCCCCCCCHHH
Q 048594          208 LYNLLSGAQPFWAESLYGTLTA-IMSREIDF-------KSD----------PWPTISSSAKDLIRRMLIRDPNNQITVAQ  269 (483)
Q Consensus       208 l~~ll~g~~pf~~~~~~~~~~~-i~~~~~~~-------~~~----------~~~~~~~~~~~li~~~L~~dP~~R~t~~e  269 (483)
                      +|+|+++..|+..  ....+.. +.......       ...          .+...+....+||.+||++||.+|||+.+
T Consensus       369 L~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e  446 (566)
T PLN03225        369 FLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKA  446 (566)
T ss_pred             HHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHH
Confidence            9999997766532  2212211 11111000       000          00112334568999999999999999999


Q ss_pred             HHcCCcCCCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHhhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHH
Q 048594          270 ILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGL  349 (483)
Q Consensus       270 ~L~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~l~~i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l  349 (483)
                      +|+||||.......  .+    ..+.+..    ...     .. ......+-..-+...+.+-+++.+|.++..+|..+.
T Consensus       447 ~L~Hpff~~~~~~~--~~----~~~~~~~----~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~  510 (566)
T PLN03225        447 ALAHPYFDREGLLG--LS----VMQNLRL----QLF-----RA-TQQDYGEAAAWVVFLMAKSGTEKEGGFTEAQLQELR  510 (566)
T ss_pred             HhCCcCcCCCCccc--cc----ccccccc----ccc-----hh-hHHHHHHHHHHHHHHHHhcCCCCCCCccHHHHHHhh
Confidence            99999998332110  00    0011000    000     00 000001112234455566678889999999998777


Q ss_pred             HhcCCCCCHHHHH--HHHHhccCCCCCc
Q 048594          350 SKLGSTLTEVDVK--QYMQAADIDGNGT  375 (483)
Q Consensus       350 ~~~~~~~~~~~~~--~l~~~~d~~~~g~  375 (483)
                      +.-.  ..+.+.+  .+.+..+.+..|.
T Consensus       511 ~~~~--~~~~~~~~~~~~~~~~~~~~~~  536 (566)
T PLN03225        511 EKEP--KKKGSAQRNALASALRLQRKGV  536 (566)
T ss_pred             hhcC--cchhhhhhhhHHHHHhhhhhhh
Confidence            6542  2222232  3666666666554

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.3e-37  Score=301.12  Aligned_cols=223  Identities=26%  Similarity=0.451  Sum_probs=174.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv   94 (483)
                      ...|++++.||+||.+.||++.... .+.||+|.+.....                                 ....|+|
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv  438 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV  438 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence            3579999999999999999998653 45667666543221                                 1112999


Q ss_pred             EeccCCCChHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~-l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |||-+- +|..+|.+... ++...++.+++|||.|+.++|..||||.||||.|+|+.    .|.+||+|||.|..+.+..
T Consensus       439 mE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG~LKLIDFGIA~aI~~DT  513 (677)
T KOG0596|consen  439 MECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KGRLKLIDFGIANAIQPDT  513 (677)
T ss_pred             eecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----eeeEEeeeechhcccCccc
Confidence            998754 89999987754 34368999999999999999999999999999999994    5689999999998876543


Q ss_pred             e---ecccccCCcccCccccCCC-----------CCCCcCchHHHHHHHHHHhhCCCCCCCCC-hHHHHHHHHccccCCC
Q 048594          174 V---YEEVVGTPLYMAPELLGPC-----------KYGKEIDIWSAGLILYNLLSGAQPFWAES-LYGTLTAIMSREIDFK  238 (483)
Q Consensus       174 ~---~~~~~gt~~y~aPE~~~~~-----------~~~~~~DiwslGvil~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~~  238 (483)
                      +   ....+||+.|||||.+...           +.+.++||||||||||+|+.|++||..-. ...-+.+|.......+
T Consensus       514 TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Ie  593 (677)
T KOG0596|consen  514 TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIE  593 (677)
T ss_pred             cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCcccc
Confidence            2   3457999999999988432           25688999999999999999999995433 3444555655433222


Q ss_pred             CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          239 SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       239 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+..+. ..++.++++.||.+||.+|||+.++|+|||+.
T Consensus       594 fp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~  631 (677)
T KOG0596|consen  594 FPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQHPFLQ  631 (677)
T ss_pred             ccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhcCcccc
Confidence            222121 23499999999999999999999999999997

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=3.9e-36  Score=291.27  Aligned_cols=223  Identities=27%  Similarity=0.424  Sum_probs=186.6

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEEe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKRE   96 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E   96 (483)
                      ...|+..+.||.|++|.||+|.++.++..+|+|++.......                               ..|+|||
T Consensus         3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (277)
T cd06640           3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME   82 (277)
T ss_pred             HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence            456888999999999999999999999999999987543110                               1199999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-e
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-Y  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-~  175 (483)
                      |+.|++|.+++.. .++++..+..++.|++.||.|||+.+++|+||+|+||++   +..+.++|+|||.+........ .
T Consensus        83 ~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06640          83 YLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKR  158 (277)
T ss_pred             cCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEE---cCCCCEEEcccccceeccCCcccc
Confidence            9999999999865 578999999999999999999999999999999999999   5667899999999977643321 2


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....++..|+|||.+.+..++.++|+||+||++|+|++|..||...........+.....   ......++..+.++|.+
T Consensus       159 ~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~  235 (277)
T cd06640         159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP---PTLTGEFSKPFKEFIDA  235 (277)
T ss_pred             ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCC---CCCchhhhHHHHHHHHH
Confidence            234678889999999888889999999999999999999999987766555544433221   11223567889999999


Q ss_pred             hCccCCCCCCCHHHHHcCCcCC
Q 048594          256 MLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||..+|.+||++.+++.||||.
T Consensus       236 ~l~~~p~~Rp~~~~il~~~~~~  257 (277)
T cd06640         236 CLNKDPSFRPTAKELLKHKFIV  257 (277)
T ss_pred             HcccCcccCcCHHHHHhChHhh
Confidence            9999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=1.5e-35  Score=290.08  Aligned_cols=224  Identities=32%  Similarity=0.425  Sum_probs=183.9

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---C--------------------------------cCeEE
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---D--------------------------------EGYLK   94 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~--------------------------------~~~lv   94 (483)
                      +|.+.+.||.|++|.||+|.++.+|+.||+|.+......   .                                ..|+|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            488999999999999999999999999999999765432   0                                01999


Q ss_pred             EeccCCCChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |||+ +++|.+++.... .+++..+..++.||+.||.|||++|++|+||+|+||++   +.++.++|+|||.+.......
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~~  156 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI---ASDGVLKLADFGLARSFGSPN  156 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEE---cCCCCEEEccceeeeeccCCC
Confidence            9999 889999998776 89999999999999999999999999999999999999   567889999999998765432


Q ss_pred             -eecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC-------------
Q 048594          174 -VYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK-------------  238 (483)
Q Consensus       174 -~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-------------  238 (483)
                       ......+++.|+|||.+.+ ..++.++|+||+||++|+|++|.+||.+......+..+........             
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (298)
T cd07841         157 RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDY  236 (298)
T ss_pred             ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccc
Confidence             2233456788999998854 3568899999999999999999888887766555544432110000             


Q ss_pred             -----------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          239 -----------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       239 -----------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                 ...+...+..+.+||.+||.++|++|||+.++|.||||+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~  286 (298)
T cd07841         237 VEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS  286 (298)
T ss_pred             ccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcccc
Confidence                       001234578899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=1.2e-35  Score=285.18  Aligned_cols=217  Identities=35%  Similarity=0.540  Sum_probs=183.9

Q ss_pred             ecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCeEEEeccCCCCh
Q 048594           57 LCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGYLKREHCDGGTL  103 (483)
Q Consensus        57 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~lv~E~~~g~~L  103 (483)
                      ||.|++|.||+|.++.++..+|+|++.+.....                                 ..|+|+||++|++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            699999999999999999999999987643211                                 11899999999999


Q ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccccCCc
Q 048594          104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL  183 (483)
Q Consensus       104 ~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~  183 (483)
                      .+++.....+++..+..++.||+.||+|||+++++|+||+|+||++   +..+.++|+|||.+.............+++.
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  157 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL---DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE  157 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---cCCCCEEEeeCCcccccCcccccccccCCcC
Confidence            9999888889999999999999999999999999999999999999   5677899999999987655433334578899


Q ss_pred             ccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC--hHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCC
Q 048594          184 YMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES--LYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP  261 (483)
Q Consensus       184 y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  261 (483)
                      |+|||.+....++.++|+||+|+++|+|++|..||....  .......+.........  .+..++++.++|.+||..+|
T Consensus       158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p  235 (262)
T cd05572         158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEF--PNYIDKAAKDLIKQLLRRNP  235 (262)
T ss_pred             ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCC--CcccCHHHHHHHHHHccCCh
Confidence            999999988788999999999999999999999998766  55555555532222211  12448899999999999999


Q ss_pred             CCCCC-----HHHHHcCCcCCC
Q 048594          262 NNQIT-----VAQILKHPWLNY  278 (483)
Q Consensus       262 ~~R~t-----~~e~L~h~~~~~  278 (483)
                      .+|||     ++|+++||||+.
T Consensus       236 ~~R~~~~~~~~~~l~~~~~~~~  257 (262)
T cd05572         236 EERLGNLKGGIKDIKKHKWFNG  257 (262)
T ss_pred             hhCcCCcccCHHHHhcChhhhC
Confidence            99999     999999999983

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=2.5e-35  Score=281.92  Aligned_cols=221  Identities=29%  Similarity=0.451  Sum_probs=190.4

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E~   97 (483)
                      +|++++.||.|++|.||.+.+..++..+++|.+.......                                ..++++||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            5999999999999999999999999999999986543111                                11899999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-e
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-V  174 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~  174 (483)
                      |++++|.+++...  ..+++..+..++.|++.+|.|||+.+++|+||+|+||++   +..+.+||+|||.+....... .
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~---~~~~~~kl~d~~~~~~~~~~~~~  157 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFL---TKAGLIKLGDFGISKILGSEYSM  157 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEE---eCCCCEEECcCcceEEccccccc
Confidence            9999999999765  568999999999999999999999999999999999999   566789999999988764433 2


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .....+++.|+|||.+.+..++.++|+||+|+++++|++|..||...........+..+.....   .+.++.++.++|.
T Consensus       158 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~  234 (256)
T cd08221         158 AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPV---VSVYSSELISLVH  234 (256)
T ss_pred             ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC---ccccCHHHHHHHH
Confidence            2345689999999999887888999999999999999999999988877777777765544322   2567899999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcC
Q 048594          255 RMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      +||.++|.+|||+.++|+|||+
T Consensus       235 ~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         235 SLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             HHcccCcccCCCHHHHhhCcCC
Confidence            9999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=5e-36  Score=286.45  Aligned_cols=225  Identities=26%  Similarity=0.466  Sum_probs=186.8

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------CCcCeEEEeccC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------SDEGYLKREHCD   99 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------~~~~~lv~E~~~   99 (483)
                      .++|.+.+.||.|++|.||+|.++.+++.+|+|.+.....                            ....|+++||+.
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   81 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG   81 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence            3579999999999999999999999999999999875431                            011189999999


Q ss_pred             CCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-eecc
Q 048594          100 GGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYEE  177 (483)
Q Consensus       100 g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~~~  177 (483)
                      +++|.+++.. ...+++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||.+....... ....
T Consensus        82 ~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~---~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (256)
T cd06612          82 AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILL---NEEGQAKLADFGVSGQLTDTMAKRNT  158 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---CCCCcEEEcccccchhcccCcccccc
Confidence            9999999975 4578999999999999999999999999999999999999   567789999999988765433 2233


Q ss_pred             cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhC
Q 048594          178 VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML  257 (483)
Q Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  257 (483)
                      ..++..|+|||.+.+..++.++|+||+|+++|+|++|..||...........+....... ......++..+.++|.+||
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l  237 (256)
T cd06612         159 VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPT-LSDPEKWSPEFNDFVKKCL  237 (256)
T ss_pred             ccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCC-CCchhhcCHHHHHHHHHHH
Confidence            457889999999988888999999999999999999999998766554444433322111 1112356789999999999


Q ss_pred             ccCCCCCCCHHHHHcCCcC
Q 048594          258 IRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       258 ~~dP~~R~t~~e~L~h~~~  276 (483)
                      +.+|.+|||+.++|.||||
T Consensus       238 ~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         238 VKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             hcChhhCcCHHHHhcCCCC
Confidence            9999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-36  Score=291.74  Aligned_cols=225  Identities=31%  Similarity=0.490  Sum_probs=187.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEEecc
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKREHC   98 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~E~~   98 (483)
                      ++|.+++.||.|++|.||+|.++.++..+|+|++......                              ...|+||||+
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC   84 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence            4699999999999999999999999999999998654311                              1119999999


Q ss_pred             CCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ceec
Q 048594           99 DGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVYE  176 (483)
Q Consensus        99 ~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~~  176 (483)
                      ++++|.+++... ..+++..+..++.|++.||.|||+.+++|+||+|+||++   +.++.++|+|||.+...... ....
T Consensus        85 ~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~  161 (280)
T cd06611          85 DGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL---TLDGDVKLADFGVSAKNKSTLQKRD  161 (280)
T ss_pred             CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---CCCCCEEEccCccchhhcccccccc
Confidence            999999998764 579999999999999999999999999999999999999   66789999999987654322 1223


Q ss_pred             ccccCCcccCccccC-----CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          177 EVVGTPLYMAPELLG-----PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      ...+++.|+|||.+.     ...++.++|+||+|+++|+|++|..||...........+........ ...+.++.++.+
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  240 (280)
T cd06611         162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTL-DQPSKWSSSFND  240 (280)
T ss_pred             eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCc-CCcccCCHHHHH
Confidence            456889999999874     33467799999999999999999999988776666666554432211 112457889999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +|.+||+.+|.+|||+.++++||||.
T Consensus       241 li~~~l~~~p~~Rps~~~il~~~~~~  266 (280)
T cd06611         241 FLKSCLVKDPDDRPTAAELLKHPFVS  266 (280)
T ss_pred             HHHHHhccChhhCcCHHHHhcChhhc
Confidence            99999999999999999999999998

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.5e-35  Score=283.36  Aligned_cols=221  Identities=24%  Similarity=0.473  Sum_probs=188.2

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------CcCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------DEGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------~~~~lv~E~   97 (483)
                      +|++.+.||+|+||.||++.+..+|+.+|+|.+......                                ...|+|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            589999999999999999999999999999998653211                                111899999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      +.+++|.+++...  ..+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+........ 
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~---~~~~~~~l~d~~~~~~~~~~~~~  157 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTIKLGDFGIARVLNSTVEL  157 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEEeeccceeecCcchhh
Confidence            9999999998764  358999999999999999999999999999999999999   5677899999999876543221 


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .....|++.|+|||.+.+..++.++|+||+||++++|++|..||...........+..+....   ....++.++.++|.
T Consensus       158 ~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~  234 (256)
T cd08218         158 ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPP---VSSHYSYDLRNLVS  234 (256)
T ss_pred             hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCC---CcccCCHHHHHHHH
Confidence            223467889999999988888999999999999999999999998877777777766554321   12467899999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcC
Q 048594          255 RMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      +||+.+|.+||++.+++.||||
T Consensus       235 ~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         235 QLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHhhCChhhCcCHHHHhhCcCC
Confidence            9999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-35  Score=289.34  Aligned_cols=225  Identities=29%  Similarity=0.442  Sum_probs=183.4

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E   96 (483)
                      ++|.+.+.||+|++|.||+|.++.+++.||+|.+.......                                ..|+|+|
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            46999999999999999999999999999999986532111                                1199999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--e
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--V  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--~  174 (483)
                      |+.++.+..++.....+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+.......  .
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~---~~~~~~kl~d~g~~~~~~~~~~~~  157 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPASP  157 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEEeeecccccCCCcccc
Confidence            99987776666666779999999999999999999999999999999999999   567899999999988765433  2


Q ss_pred             ecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc------------------
Q 048594          175 YEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI------------------  235 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~------------------  235 (483)
                      .....+++.|+|||++.+. .++.++|+||+|+++|+|++|.+||.+......+..+.....                  
T Consensus       158 ~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (288)
T cd07833         158 LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAG  237 (288)
T ss_pred             ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccc
Confidence            3345678899999999877 778999999999999999999999987665444433321100                  


Q ss_pred             -CCCC---------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          236 -DFKS---------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       236 -~~~~---------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                       .++.         .....++.++.+||.+||..+|++|||+++++.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         238 VAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             cccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence             0000         0112348899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.2e-35  Score=288.11  Aligned_cols=221  Identities=30%  Similarity=0.474  Sum_probs=180.4

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeEEEe
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYLKRE   96 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~lv~E   96 (483)
                      |++.+.||+|++|.||+|.++.++..||+|.+......                                  ...|+|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            77899999999999999999999999999998753211                                  11199999


Q ss_pred             ccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           97 HCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      |+.+ +|.+.+... ..+++..+..++.||+.||.|||+.+++|+||+|+||++   +. +.++|+|||.+.........
T Consensus        81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l---~~-~~~kl~dfg~~~~~~~~~~~  155 (282)
T cd07831          81 LMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI---KD-DILKLADFGSCRGIYSKPPY  155 (282)
T ss_pred             cCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE---cC-CCeEEEecccccccccCCCc
Confidence            9976 888888764 578999999999999999999999999999999999999   44 89999999999876544444


Q ss_pred             cccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc------------------cC
Q 048594          176 EEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE------------------ID  236 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~------------------~~  236 (483)
                      ....+++.|+|||.+.. ..++.++|+||+||++|+|++|.+||.+.+..+....+....                  ..
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (282)
T cd07831         156 TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYN  235 (282)
T ss_pred             CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccccc
Confidence            45568899999997644 456889999999999999999999998877655544443211                  01


Q ss_pred             CCCC-------CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 FKSD-------PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 ~~~~-------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ++..       ..+.++..+.++|.+||.++|.+|||+.++++||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         236 FPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             CcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            1110       013568899999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.1e-37  Score=282.83  Aligned_cols=226  Identities=25%  Similarity=0.468  Sum_probs=197.2

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC----------------------------------eE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG----------------------------------YL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------~l   93 (483)
                      -++|.++++||+|+|..|.++.+++|.+.||+|++++.-..+..                                  ++
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            47899999999999999999999999999999999886533222                                  89


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee-ccCC
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF-FEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~-~~~~  172 (483)
                      |.||.+||+|.-.++++.+++|+.++.+...|+.||.|||++||++||||.+|+|+   +..+.+||+|+|+... +.++
T Consensus       329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~~g  405 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLGPG  405 (593)
T ss_pred             EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999   7889999999999864 4567


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCC-------CChH-HHHHHHHccccCCCCCCCCC
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA-------ESLY-GTLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~-------~~~~-~~~~~i~~~~~~~~~~~~~~  244 (483)
                      ...++.||||.|.|||++.+..|+..+|+|+|||++++|+.|+.||..       .+.. -.+.-|....+..|.    .
T Consensus       406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr----s  481 (593)
T KOG0695|consen  406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR----S  481 (593)
T ss_pred             cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc----e
Confidence            778899999999999999999999999999999999999999999942       1222 234555555555543    5


Q ss_pred             CCHHHHHHHHHhCccCCCCCCC------HHHHHcCCcCCCCC
Q 048594          245 ISSSAKDLIRRMLIRDPNNQIT------VAQILKHPWLNYEN  280 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t------~~e~L~h~~~~~~~  280 (483)
                      +|-.+..+++..|++||.+|..      ..++..|+||+.-.
T Consensus       482 lsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~id  523 (593)
T KOG0695|consen  482 LSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSID  523 (593)
T ss_pred             eehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCC
Confidence            6778889999999999999974      57999999998443

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=5.7e-36  Score=292.57  Aligned_cols=230  Identities=29%  Similarity=0.536  Sum_probs=189.2

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------CCcCeE
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------SDEGYL   93 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------~~~~~l   93 (483)
                      ..+..+.|.....||+|+||.||++.+..++..+|||.+.....                              .+..|+
T Consensus        17 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~l   96 (292)
T cd06658          17 PGDPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWV   96 (292)
T ss_pred             cCchHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEE
Confidence            34556677778889999999999999999999999999865321                              111299


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |+||+++++|.+++.. .++++..+..++.||+.||.|||+++++||||+|+||++   +.++.++|+|||++.......
T Consensus        97 v~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kL~dfg~~~~~~~~~  172 (292)
T cd06658          97 VMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL---TSDGRIKLSDFGFCAQVSKEV  172 (292)
T ss_pred             EEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEccCcchhhccccc
Confidence            9999999999998754 478999999999999999999999999999999999999   566789999999886543221


Q ss_pred             -eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          174 -VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       174 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                       ......|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...........+..... ........++..+.++
T Consensus       173 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l  251 (292)
T cd06658         173 PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLP-PRVKDSHKVSSVLRGF  251 (292)
T ss_pred             ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CccccccccCHHHHHH
Confidence             12335688999999999888889999999999999999999999988776665555443221 1112223578899999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      |.+||..+|.+|||++++++||||..
T Consensus       252 i~~~l~~~P~~Rpt~~~il~~~~~~~  277 (292)
T cd06658         252 LDLMLVREPSQRATAQELLQHPFLKL  277 (292)
T ss_pred             HHHHccCChhHCcCHHHHhhChhhhc
Confidence            99999999999999999999999983

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=2.7e-35  Score=283.37  Aligned_cols=223  Identities=26%  Similarity=0.481  Sum_probs=183.6

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------------CcC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------------DEG   91 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------------~~~   91 (483)
                      ..|.+.+.||+|+||.||+|.++.+|..||+|.+......                                     ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4699999999999999999999999999999987532110                                     011


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+++||++|++|.+++.+..++++..+..++.||+.||.|||+.+++|+||+|.||++   +..+.++|+|||.+.....
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~Dfg~~~~~~~  158 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILR---DSVGNVKLGDFGASKRLQT  158 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe---cCCCCEEECcCcccccccc
Confidence            7899999999999999887889999999999999999999999999999999999999   5677899999999876532


Q ss_pred             C----ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          172 G----KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       172 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      .    .......++..|+|||.+.+..++.++|+||+||++|+|++|..||...........+......  ....+.++.
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  236 (265)
T cd06652         159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN--PVLPPHVSD  236 (265)
T ss_pred             ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCC--CCCchhhCH
Confidence            1    1122346888999999998878899999999999999999999999776544444443322211  112235678


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+.++|.+||. +|.+|||++++++|||++
T Consensus       237 ~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         237 HCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            89999999994 999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=2e-35  Score=282.44  Aligned_cols=222  Identities=28%  Similarity=0.426  Sum_probs=186.5

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------------cCeEE
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------------EGYLK   94 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------------~~~lv   94 (483)
                      +|+..+.||+|++|.||+|..+.++..+|+|.+.......                                   ..|++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            5788899999999999999999999999999987643110                                   11899


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      +||++|++|.+++....++++..+..++.||+.||.|||+.+++|+||+|+||++   +..+.+||+|||.+........
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~---~~~~~~kl~d~~~~~~~~~~~~  157 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV---DTNGVVKLADFGMAKQVVEFSF  157 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccceecccccc
Confidence            9999999999999888889999999999999999999999999999999999999   5677899999999887654433


Q ss_pred             ecccccCCcccCccccCCCC-CCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      .....+++.|+|||.+.... ++.++|+||+|+++|+|++|..||...........+.... . .....+.+++.+.+++
T Consensus       158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~li  235 (258)
T cd06632         158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK-E-LPPIPDHLSDEAKDFI  235 (258)
T ss_pred             ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc-c-CCCcCCCcCHHHHHHH
Confidence            34567889999999987666 8899999999999999999999997766444444443311 1 1112246789999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .+||..+|.+|||+.+++.|||+
T Consensus       236 ~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         236 LKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             HHHhhcCcccCcCHHHHhcCCCC
Confidence            99999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=2.3e-35  Score=290.14  Aligned_cols=227  Identities=27%  Similarity=0.408  Sum_probs=179.0

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------------   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------------   89 (483)
                      ..-++|.+.+.||+|++|.||+|.++.+++.||+|.+.......                                    
T Consensus         9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (310)
T cd07865           9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN   88 (310)
T ss_pred             chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence            34457999999999999999999999999999999885432110                                    


Q ss_pred             ----cCeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           90 ----EGYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        90 ----~~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                          ..|+|+||+.+ +|.+.+... ..+++..+..++.||+.||.|||++|++|+||+|+||++   +.++.++|+|||
T Consensus        89 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg  164 (310)
T cd07865          89 RYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKLADFG  164 (310)
T ss_pred             CCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---CCCCcEEECcCC
Confidence                01899999976 788877654 378999999999999999999999999999999999999   677899999999


Q ss_pred             cceeccCCc-----eecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC
Q 048594          165 LAFFFEEGK-----VYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK  238 (483)
Q Consensus       165 ~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  238 (483)
                      .+.......     ......++..|+|||.+.+. .++.++|+||+|+++|+|++|.+||.+.........+......++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~  244 (310)
T cd07865         165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT  244 (310)
T ss_pred             CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            987654221     11234578889999988654 368899999999999999999999987765544433332111111


Q ss_pred             CCC----------------------------CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          239 SDP----------------------------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       239 ~~~----------------------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ...                            ....+..+++||.+||..||.+|||++++|+||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            000                            01135678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=1.2e-35  Score=295.90  Aligned_cols=228  Identities=30%  Similarity=0.454  Sum_probs=185.6

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------------c
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------------E   90 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------------~   90 (483)
                      +.++|.+.+.||+|++|.||+|.++.+|..||+|.+.......                                    .
T Consensus         3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   82 (334)
T cd07855           3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD   82 (334)
T ss_pred             hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence            4578999999999999999999999999999999987642110                                    1


Q ss_pred             CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           91 GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      .|+|+||+.+ +|.+++...+.+++..+..++.||+.||.|||+++++||||||+||++   +.++.+||+|||.+....
T Consensus        83 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~~~~~~  158 (334)
T cd07855          83 VYVVMDLMES-DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARGLS  158 (334)
T ss_pred             EEEEEehhhh-hHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEecccccceeec
Confidence            1899999964 899999888889999999999999999999999999999999999999   677899999999987654


Q ss_pred             CCce-----ecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc----------
Q 048594          171 EGKV-----YEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE----------  234 (483)
Q Consensus       171 ~~~~-----~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~----------  234 (483)
                      ....     .....|+..|+|||.+.+ ..++.++|+||+||++|+|++|.+||.+.+....+..+....          
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~  238 (334)
T cd07855         159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNR  238 (334)
T ss_pred             ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhh
Confidence            3211     123478889999998865 357899999999999999999999998766544433322210          


Q ss_pred             -------------cCCCCCC----CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          235 -------------IDFKSDP----WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       235 -------------~~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                   ......+    ++..+.++.++|.+||+.+|.+|||+.+++.||||..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~  299 (334)
T cd07855         239 IGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQ  299 (334)
T ss_pred             hchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhh
Confidence                         0000111    2457899999999999999999999999999999973

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-36  Score=302.89  Aligned_cols=228  Identities=25%  Similarity=0.408  Sum_probs=187.5

Q ss_pred             ccccceEE-----eeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC-----------------------------
Q 048594           46 DIKLHFTI-----AEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG-----------------------------   91 (483)
Q Consensus        46 ~i~~~y~~-----~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------------------   91 (483)
                      .|+-+|+.     .-+||.|.||+||.|++..|...+|||-+...+.....                             
T Consensus       567 ~iefeYeyde~~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf  646 (1226)
T KOG4279|consen  567 KIEFEYEYDESNERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGF  646 (1226)
T ss_pred             ceEEEeeecCCCceEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCe
Confidence            45555554     23599999999999999999999999999776532211                             


Q ss_pred             -eEEEeccCCCChHHHHhcC-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           92 -YLKREHCDGGTLVDRISDR-ERY--TERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        92 -~lv~E~~~g~~L~~~l~~~-~~l--~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                       -|.||..+||+|.+.+... +++  .|.++..+.+||++||.|||.+.|||||||.+|+|+.  .-.|.+||+|||-++
T Consensus       647 ~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGTsK  724 (1226)
T KOG4279|consen  647 FKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGTSK  724 (1226)
T ss_pred             EEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEecccccch
Confidence             6889999999999999876 777  8899999999999999999999999999999999996  457899999999988


Q ss_pred             eccCC-ceecccccCCcccCccccCCC--CCCCcCchHHHHHHHHHHhhCCCCCCCCCh--HHHHHHHHccccCCCCCCC
Q 048594          168 FFEEG-KVYEEVVGTPLYMAPELLGPC--KYGKEIDIWSAGLILYNLLSGAQPFWAESL--YGTLTAIMSREIDFKSDPW  242 (483)
Q Consensus       168 ~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~~ll~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~  242 (483)
                      .+..- ....+..||..|||||++.++  .|+.++|||||||++.||.||++||.....  ..+++   -+.+...++-+
T Consensus       725 RLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk---VGmyKvHP~iP  801 (1226)
T KOG4279|consen  725 RLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK---VGMYKVHPPIP  801 (1226)
T ss_pred             hhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhh---hcceecCCCCc
Confidence            76533 344678899999999999654  589999999999999999999999964322  22222   23333333333


Q ss_pred             CCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       243 ~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      ..++.+++.||.+|+.++|..||+|.++|..||+..
T Consensus       802 eelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~  837 (1226)
T KOG4279|consen  802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQH  837 (1226)
T ss_pred             HHHHHHHHHHHHHHcCCCcccCccHHHhccCccccc
Confidence            568899999999999999999999999999999983

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.4e-35  Score=292.96  Aligned_cols=222  Identities=28%  Similarity=0.414  Sum_probs=167.3

Q ss_pred             eeeecccCceeEEEEEECC--CCCEEEEEEeccCCCC------------------------------CcCeEEEeccCCC
Q 048594           54 AEELCRGESGRIYLCTENS--TGLQFACKSISKTSKS------------------------------DEGYLKREHCDGG  101 (483)
Q Consensus        54 ~~~lg~G~~g~V~~~~~~~--~~~~~avK~~~~~~~~------------------------------~~~~lv~E~~~g~  101 (483)
                      ...||+|+||+||+|.++.  ++..+|+|.+......                              ...|+|+||+.+ 
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-   84 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-   84 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-
Confidence            4679999999999999764  5689999998754311                              111899999976 


Q ss_pred             ChHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC-CCCCcEEEeecccceeccC
Q 048594          102 TLVDRISDR---------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD-DENATLKATDFGLAFFFEE  171 (483)
Q Consensus       102 ~L~~~l~~~---------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~-~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +|.+++...         ..+++..+..++.||+.||.|||+.+|+||||||+||++..+ +.++.+||+|||++.....
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~  164 (317)
T cd07867          85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS  164 (317)
T ss_pred             cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCC
Confidence            788877421         258899999999999999999999999999999999999643 3567899999999986643


Q ss_pred             Cc----eecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChH---------HHHHHHHccc---
Q 048594          172 GK----VYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLY---------GTLTAIMSRE---  234 (483)
Q Consensus       172 ~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~---------~~~~~i~~~~---  234 (483)
                      ..    ......||+.|+|||++.+. .++.++||||+||++|+|++|.+||......         .....+....   
T Consensus       165 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (317)
T cd07867         165 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFP  244 (317)
T ss_pred             CcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCC
Confidence            21    12345689999999998763 5789999999999999999999999654321         1111111000   


Q ss_pred             -----------cCCC--------------------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          235 -----------IDFK--------------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       235 -----------~~~~--------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                                 ..++                    .......+..+.++|.+||+.||.+|||++|+|+||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         245 ADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             ChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                       0000                    00011235678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-35  Score=285.79  Aligned_cols=225  Identities=26%  Similarity=0.453  Sum_probs=184.5

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------------CCcC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------------SDEG   91 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------------~~~~   91 (483)
                      .++|.+.+.||+|++|.||+|.++.+++.+|+|++.....                                    ....
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL   84 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence            4789999999999999999999999999999999865421                                    0012


Q ss_pred             eEEEeccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           92 YLKREHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                      |+|+||+.+++|.+++..    ..++++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||.+.
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~---~~~~~~~l~d~~~~~  161 (275)
T cd06608          85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL---TKNAEVKLVDFGVSA  161 (275)
T ss_pred             EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---ccCCeEEECCCccce
Confidence            799999999999998865    3579999999999999999999999999999999999999   567789999999987


Q ss_pred             eccCCc-eecccccCCcccCccccCC-----CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCC
Q 048594          168 FFEEGK-VYEEVVGTPLYMAPELLGP-----CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP  241 (483)
Q Consensus       168 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  241 (483)
                      ...... ......|++.|+|||.+..     ..++.++|+||+||++|+|++|..||...........+........ ..
T Consensus       162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~  240 (275)
T cd06608         162 QLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTL-KS  240 (275)
T ss_pred             ecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCC-Cc
Confidence            654322 2234568889999998753     2467889999999999999999999987665555555544332211 11


Q ss_pred             CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          242 WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       242 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ...++..+++||.+||..||.+|||+.+++.|||+
T Consensus       241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         241 PENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            12367899999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=6.4e-36  Score=287.35  Aligned_cols=223  Identities=29%  Similarity=0.452  Sum_probs=184.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E~   97 (483)
                      ++|++.+.||+|++|.||+|.++.+++.+|+|.+.......                               ..|+++||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            36888999999999999999999999999999987653211                               11899999


Q ss_pred             cCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           98 CDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      +.+++|.+++... .++++..+..++.||+.||.|||+ .+++|+||+|+||++   +..+.++|+|||.+........ 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~---~~~~~~~l~d~g~~~~~~~~~~-  156 (265)
T cd06605          81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILV---NSRGQIKLCDFGVSGQLVNSLA-  156 (265)
T ss_pred             cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEE---CCCCCEEEeecccchhhHHHHh-
Confidence            9999999999876 789999999999999999999999 999999999999999   5677899999999876543222 


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC-----hHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES-----LYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      ....++..|+|||.+.+..++.++|+||+|+++|+|++|..||....     .......+......  ..+...++.++.
T Consensus       157 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  234 (265)
T cd06605         157 KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPP--RLPSGKFSPDFQ  234 (265)
T ss_pred             hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCC--CCChhhcCHHHH
Confidence            22678889999999988889999999999999999999999996542     22333333332211  111112788999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ++|.+||..+|.+|||+.+++.||||+
T Consensus       235 ~li~~~l~~~p~~Rpt~~~ll~~~~~~  261 (265)
T cd06605         235 DFVNLCLIKDPRERPSYKELLEHPFIK  261 (265)
T ss_pred             HHHHHHcCCCchhCcCHHHHhhCchhh
Confidence            999999999999999999999999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.5e-35  Score=305.02  Aligned_cols=226  Identities=24%  Similarity=0.363  Sum_probs=178.2

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------CCcCeEEEeccCCCCh
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------SDEGYLKREHCDGGTL  103 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------~~~~~lv~E~~~g~~L  103 (483)
                      ...|.+.+.||+|+||.||+|.+..+++.||||.......                        ....|+|+|++. ++|
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L  246 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDL  246 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCH
Confidence            4479999999999999999999999999999996432210                        111289999996 588


Q ss_pred             HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc---eecccc
Q 048594          104 VDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---VYEEVV  179 (483)
Q Consensus       104 ~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~---~~~~~~  179 (483)
                      .+++... ..+++..+..++.||+.||.|||++||+||||||+|||+   +..+.++|+|||++.......   ......
T Consensus       247 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl---~~~~~vkL~DFGla~~~~~~~~~~~~~~~~  323 (461)
T PHA03211        247 YTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV---NGPEDICLGDFGAACFARGSWSTPFHYGIA  323 (461)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEE---CCCCCEEEcccCCceecccccccccccccC
Confidence            8888654 579999999999999999999999999999999999999   567789999999997654321   112356


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC--------hHHHHHHHHccccC---C-----------
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES--------LYGTLTAIMSREID---F-----------  237 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~---~-----------  237 (483)
                      ||+.|+|||++.+..++.++|||||||++|+|++|..|+....        .......+......   +           
T Consensus       324 GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~  403 (461)
T PHA03211        324 GTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQ  403 (461)
T ss_pred             CCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHH
Confidence            9999999999998889999999999999999999887654321        12222222221111   1           


Q ss_pred             -------------CCCCCC---CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          238 -------------KSDPWP---TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       238 -------------~~~~~~---~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                   ....|.   .++..+.+||.+||+.||.+|||+.|+|+||||+
T Consensus       404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~  459 (461)
T PHA03211        404 YRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQ  459 (461)
T ss_pred             HHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccC
Confidence                         111121   3567899999999999999999999999999997

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1e-35  Score=295.58  Aligned_cols=222  Identities=19%  Similarity=0.287  Sum_probs=174.2

Q ss_pred             Eeeeeccc--CceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------CcCeEEEecc
Q 048594           53 IAEELCRG--ESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------DEGYLKREHC   98 (483)
Q Consensus        53 ~~~~lg~G--~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------~~~~lv~E~~   98 (483)
                      ++++||+|  ++|+||++.++.+|+.||+|.+......                                ...|+|+|||
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            56789999  6789999999999999999999754211                                1119999999


Q ss_pred             CCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc---
Q 048594           99 DGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---  173 (483)
Q Consensus        99 ~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~---  173 (483)
                      ++++|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+||++   +.++.++++||+.+.......   
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~---~~~~~~~l~~~~~~~~~~~~~~~~  158 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMINHGQRL  158 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEE---ecCCcEEEcccchhhccccccccc
Confidence            999999999653  458999999999999999999999999999999999999   566789999998654432111   


Q ss_pred             -----eecccccCCcccCccccCC--CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC--------
Q 048594          174 -----VYEEVVGTPLYMAPELLGP--CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK--------  238 (483)
Q Consensus       174 -----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--------  238 (483)
                           ......++..|+|||++.+  ..++.++||||+||++|+|++|..||....................        
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (327)
T cd08227         159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPA  238 (327)
T ss_pred             cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhh
Confidence                 0112346777999999875  3588999999999999999999999976554443333332211100        


Q ss_pred             ----------------------------------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          239 ----------------------------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       239 ----------------------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                                        .+....+++++.+||.+||+.||++|||++++++||||+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~  311 (327)
T cd08227         239 EELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK  311 (327)
T ss_pred             hhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhh
Confidence                                              000113567899999999999999999999999999997

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.4e-35  Score=293.73  Aligned_cols=230  Identities=27%  Similarity=0.431  Sum_probs=186.8

Q ss_pred             ccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------
Q 048594           42 KAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------   89 (483)
Q Consensus        42 ~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------   89 (483)
                      .+...+.++|++++.||+|++|.||+|.+..+|..||||.+.......                                
T Consensus         8 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   87 (343)
T cd07880           8 KTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL   87 (343)
T ss_pred             hhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCc
Confidence            345668889999999999999999999999999999999985421100                                


Q ss_pred             ------cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeec
Q 048594           90 ------EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF  163 (483)
Q Consensus        90 ------~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Df  163 (483)
                            ..|+|+||+ |++|.+++.. ..+++..+..++.||+.||.|||+.||+||||+|+||++   +.++.++|+||
T Consensus        88 ~~~~~~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill---~~~~~~kl~df  162 (343)
T cd07880          88 SLDRFHDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV---NEDCELKILDF  162 (343)
T ss_pred             cccccceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeec
Confidence                  117999999 6688888764 579999999999999999999999999999999999999   56778999999


Q ss_pred             ccceeccCCceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCC-----
Q 048594          164 GLAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDF-----  237 (483)
Q Consensus       164 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-----  237 (483)
                      |.+......  .....+++.|+|||.+.+ ..++.++|+||+|+++|+|++|.+||.+.........+.......     
T Consensus       163 g~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  240 (343)
T cd07880         163 GLARQTDSE--MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV  240 (343)
T ss_pred             ccccccccC--ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence            998765432  234467889999998865 357889999999999999999999998776554444433211110     


Q ss_pred             ------------------C----CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          238 ------------------K----SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       238 ------------------~----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                        .    ...++.+++.+.++|.+||+.||.+|||+.+++.||||+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~  303 (343)
T cd07880         241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE  303 (343)
T ss_pred             HhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence                              0    0112467888999999999999999999999999999984

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=4.9e-35  Score=285.49  Aligned_cols=224  Identities=26%  Similarity=0.422  Sum_probs=177.0

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E~   97 (483)
                      ++|.+.+.||+|++|.||+|.++.+++.||+|.+.......                               ..|+|+||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            57999999999999999999999999999999986543211                               11999999


Q ss_pred             cCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-cee
Q 048594           98 CDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~  175 (483)
                      +.+ +|.+++... ..+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+...... ...
T Consensus        85 ~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~  160 (291)
T cd07844          85 LDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI---SERGELKLADFGLARAKSVPSKTY  160 (291)
T ss_pred             CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE---cCCCCEEECccccccccCCCCccc
Confidence            986 899988754 468999999999999999999999999999999999999   66778999999998754321 112


Q ss_pred             cccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCC-hHHHHHHHHccccC-----------------
Q 048594          176 EEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAES-LYGTLTAIMSREID-----------------  236 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~-~~~~~~~i~~~~~~-----------------  236 (483)
                      ....+++.|+|||.+.+ ..++.++|+||+|+++|+|++|..||.+.. ..+.+..+.+....                 
T Consensus       161 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (291)
T cd07844         161 SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKP  240 (291)
T ss_pred             cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccc
Confidence            23356788999998865 457889999999999999999999997655 22333322211000                 


Q ss_pred             --CC---C----CCCCCCC--HHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 --FK---S----DPWPTIS--SSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 --~~---~----~~~~~~~--~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                        +.   .    ...+.++  ..+.++|.+||+++|.+|||+.++|.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         241 YSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             ccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence              00   0    0112344  788999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=2.5e-35  Score=282.76  Aligned_cols=223  Identities=29%  Similarity=0.470  Sum_probs=189.2

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E~   97 (483)
                      ++|.+.+.||.|++|.||+|+++.+++.+|+|.+.......                               ..|+|+||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            36899999999999999999999999999999987764210                               11899999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee-
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY-  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~-  175 (483)
                      +++++|.+++....++++..+..++.||+.||.|||+ .+++|+||+|+||++   +.++.++|+|||.+......... 
T Consensus        81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~---~~~~~~~l~df~~~~~~~~~~~~~  157 (264)
T cd06623          81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI---NSKGEVKIADFGISKVLENTLDQC  157 (264)
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE---CCCCCEEEccCccceecccCCCcc
Confidence            9999999999888899999999999999999999999 999999999999999   67789999999998876543322 


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC---hHHHHHHHHccccCCCCCCCCC-CCHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES---LYGTLTAIMSREIDFKSDPWPT-ISSSAKD  251 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~  251 (483)
                      ....++..|+|||.+....++.++|+||||+++|+|++|..||....   .......+.......   .... ++..+.+
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~  234 (264)
T cd06623         158 NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPS---LPAEEFSPEFRD  234 (264)
T ss_pred             cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCC---CCcccCCHHHHH
Confidence            24567889999999988888999999999999999999999997763   344444544332211   1123 7899999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +|.+||..+|++|||+.++++|||++
T Consensus       235 li~~~l~~~p~~R~~~~~ll~~~~~~  260 (264)
T cd06623         235 FISACLQKDPKKRPSAAELLQHPFIK  260 (264)
T ss_pred             HHHHHccCChhhCCCHHHHHhCHHHH
Confidence            99999999999999999999999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=3.6e-35  Score=284.20  Aligned_cols=221  Identities=32%  Similarity=0.571  Sum_probs=189.9

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~lv   94 (483)
                      ++|.+.+.||+|++|.||+|..+.+|+.+|+|++.+....                                  ...|+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            4799999999999999999999999999999998763210                                  111999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      |||+.+++|.+++...+.+++..+..++.||+.||.+||+.|++|+||+|+||++   +..+.++|+|||.+........
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i---~~~~~~~l~df~~~~~~~~~~~  157 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNSS  157 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEecCCccccccCCccc
Confidence            9999999999999988899999999999999999999999999999999999999   5677899999999876543221


Q ss_pred             ---------------------ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcc
Q 048594          175 ---------------------YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR  233 (483)
Q Consensus       175 ---------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~  233 (483)
                                           .....++..|+|||.+....++.++|+||||++++++++|..||........+..+...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  237 (280)
T cd05581         158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL  237 (280)
T ss_pred             cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc
Confidence                                 12235688899999998878899999999999999999999999888766666666644


Q ss_pred             ccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCH----HHHHcCCcC
Q 048594          234 EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV----AQILKHPWL  276 (483)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~----~e~L~h~~~  276 (483)
                      ...++    +.+++.+.+||.+||+.+|.+|||+    .++|+||||
T Consensus       238 ~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         238 EYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             CCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            44333    3568999999999999999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1.8e-35  Score=288.98  Aligned_cols=224  Identities=29%  Similarity=0.452  Sum_probs=182.9

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~lv   94 (483)
                      +.|.+.+.||.|++|.||+|.++.+++.+|+|.+......                                  ...|+|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            4699999999999999999999999999999999654311                                  122999


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-  172 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-  172 (483)
                      +||+.+ +|.+++... ..+++..+..++.||+.||+|||+++++|+||+|+||++   +.++.++|+|||.+...... 
T Consensus        85 ~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~  160 (293)
T cd07843          85 MEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL---NNRGILKICDFGLAREYGSPL  160 (293)
T ss_pred             ehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCcEEEeecCceeeccCCc
Confidence            999986 899988764 458999999999999999999999999999999999999   66789999999998876543 


Q ss_pred             ceecccccCCcccCccccCCCC-CCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC---------------
Q 048594          173 KVYEEVVGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID---------------  236 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~---------------  236 (483)
                      .......+++.|+|||.+.+.. ++.++|+||+|+++|+|++|.+||...........+......               
T Consensus       161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (293)
T cd07843         161 KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGA  240 (293)
T ss_pred             cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchh
Confidence            2233456788999999886543 588999999999999999999999887765555444321100               


Q ss_pred             -----------CCCCCCCC--CCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 -----------FKSDPWPT--ISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 -----------~~~~~~~~--~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                                 .....++.  +++.+.++|.+||+.+|++|||+.|+|.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         241 KKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             cccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence                       00111223  48889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-36  Score=254.93  Aligned_cols=224  Identities=29%  Similarity=0.500  Sum_probs=190.3

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC--------------------------------eEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------------YLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------------------------------~lv~E~   97 (483)
                      .|.-.+.||+|.||+||+++++.|++.||+|.++..+..+..                                -+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            467788999999999999999999999999999877644433                                799999


Q ss_pred             cCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-cee
Q 048594           98 CDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~  175 (483)
                      |.. +|..+... ++.+..+.++.++.|++.||.+||++++.|||+||.|.|+   +.++.+||+|||+++.+.-+ ..+
T Consensus        83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgipvrcy  158 (292)
T KOG0662|consen   83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVRCY  158 (292)
T ss_pred             hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCceEee
Confidence            977 78888865 4789999999999999999999999999999999999999   78999999999999877543 245


Q ss_pred             cccccCCcccCccccCCCC-CCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCC-----------
Q 048594          176 EEVVGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPW-----------  242 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-----------  242 (483)
                      +..+.|.+|+||.++.+.+ |+...|+||.|||+.|+.. |++.|.+.+..++++.|...--......|           
T Consensus       159 saevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~  238 (292)
T KOG0662|consen  159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKP  238 (292)
T ss_pred             eceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcc
Confidence            5567899999999987654 7889999999999999986 88889999888888888753322222222           


Q ss_pred             --------------CCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          243 --------------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       243 --------------~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                    |.++...++++.++|.-+|.+|++++++|+||||.
T Consensus       239 yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~  287 (292)
T KOG0662|consen  239 YPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFS  287 (292)
T ss_pred             cCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccc
Confidence                          23445678999999999999999999999999997

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=5.5e-35  Score=284.01  Aligned_cols=223  Identities=30%  Similarity=0.478  Sum_probs=179.2

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E~   97 (483)
                      .|++++.||.|++|.||+|+++.+|..+|||.+.......                                ..|+|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            3889999999999999999999999999999987543111                                11999999


Q ss_pred             cCCCChHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-e
Q 048594           98 CDGGTLVDRISD--RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-V  174 (483)
Q Consensus        98 ~~g~~L~~~l~~--~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~  174 (483)
                      +.+ +|..++..  ...+++..+..++.||+.||+|||+.+++|+||+|+||++   +.++.++|+|||.+....... .
T Consensus        81 ~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill---~~~~~~~l~dfg~~~~~~~~~~~  156 (284)
T cd07860          81 LHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRT  156 (284)
T ss_pred             ccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEeeccchhhcccCccc
Confidence            964 89888865  3568999999999999999999999999999999999999   567789999999987654321 2


Q ss_pred             ecccccCCcccCccccCCCC-CCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-----------------
Q 048594          175 YEEVVGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-----------------  236 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----------------  236 (483)
                      .....+++.|+|||.+.+.. ++.++|+||||+++|+|++|..||.+.........+......                 
T Consensus       157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd07860         157 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKP  236 (284)
T ss_pred             cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHh
Confidence            23345688899999886644 578899999999999999999999877655444333221100                 


Q ss_pred             -CCC-------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 -FKS-------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 -~~~-------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                       ++.       ...+.++++++++|.+||+.||.+|||+++++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         237 SFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             hcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence             000       0123578899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=6.2e-35  Score=283.75  Aligned_cols=222  Identities=28%  Similarity=0.425  Sum_probs=184.0

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------------Cc-----
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------------DE-----   90 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------------~~-----   90 (483)
                      |++.+.||+|++|.||+|.++.+++.+|+|.+......                                   +.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            78899999999999999999999999999999643211                                   01     


Q ss_pred             CeEEEeccCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           91 GYLKREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      .|+++||+.+ +|.+++....  .+++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||.+..
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili---~~~~~~~l~dfg~~~~  156 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILV---TSDGQVKIADFGLARI  156 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEE---ccCCCEEEeccCccee
Confidence            2899999976 7988887643  58999999999999999999999999999999999999   5668999999999987


Q ss_pred             ccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-----CC-----
Q 048594          169 FEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-----FK-----  238 (483)
Q Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----~~-----  238 (483)
                      ...........+++.|+|||.+.+..++.++|+||+||++|+|++|.+||.+....+....+......     ++     
T Consensus       157 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd07838         157 YSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL  236 (287)
T ss_pred             ccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCccc
Confidence            75544444456788999999998888899999999999999999999999888777766665432110     00     


Q ss_pred             ------C-------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          239 ------S-------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       239 ------~-------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                            .       ...+.+++.+.++|.+||+.||.+||++.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             chhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence                  0       0012456788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=9e-35  Score=277.44  Aligned_cols=221  Identities=31%  Similarity=0.533  Sum_probs=189.7

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------CcCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------DEGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------~~~~lv~E~   97 (483)
                      +|.+.+.||+|++|.||++.+..++..+|+|++......                                ...++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            589999999999999999999999999999999765321                                111899999


Q ss_pred             cCCCChHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           98 CDGGTLVDRISDR----ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        98 ~~g~~L~~~l~~~----~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      +++++|.+++...    ..+++..+..++.+|+.||.|||++|++|+||+|+||++   +.++.++|+|||.+.......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~---~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL---TSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEE---cCCCcEEECCccceeecccCc
Confidence            9999999999764    679999999999999999999999999999999999999   567889999999998765433


Q ss_pred             -eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          174 -VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       174 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                       ......|++.|+|||.+.+..++.++|+||+|+++++|++|..||...........+........   ....+..+.++
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  234 (258)
T cd08215         158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPI---PSQYSSELRNL  234 (258)
T ss_pred             ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCC---CCCCCHHHHHH
Confidence             23345788899999999888889999999999999999999999988776666666555432221   23678999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      +.+||..+|++|||+.++|.||||
T Consensus       235 i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         235 VSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             HHHHcCCChhhCcCHHHHhcCCCC
Confidence            999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.3e-35  Score=283.10  Aligned_cols=222  Identities=25%  Similarity=0.457  Sum_probs=183.0

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------c--------------CeEEE
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------E--------------GYLKR   95 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------~--------------~~lv~   95 (483)
                      .|.+.+.||+|++|.||+|.+..++..+|+|.+.......                    .              .|+|+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            5888999999999999999999999999999986532110                    0              18999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      ||++|++|.+++... .+++..+..++.||+.||.|||+.|++|+||+|+||++   +..+.++|+|||.+........ 
T Consensus        82 e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06917          82 EYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILV---TNTGNVKLCDFGVAALLNQNSSK  157 (277)
T ss_pred             ecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEE---cCCCCEEEccCCceeecCCCccc
Confidence            999999999998664 89999999999999999999999999999999999999   5678999999999887654322 


Q ss_pred             ecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      .....|++.|+|||.+.+ ..++.++|+||+||++|+|++|..||.+.........+....  .+......++.++.+++
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i  235 (277)
T cd06917         158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK--PPRLEDNGYSKLLREFV  235 (277)
T ss_pred             cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCC--CCCCCcccCCHHHHHHH
Confidence            233468889999998865 346889999999999999999999998766554444333221  11111223788999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcCC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+||+.||.+|||+.+++.||||+
T Consensus       236 ~~~l~~~p~~R~~~~~il~~~~~~  259 (277)
T cd06917         236 AACLDEEPKERLSAEELLKSKWIK  259 (277)
T ss_pred             HHHcCCCcccCcCHHHHhhChHhh
Confidence            999999999999999999999997

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4e-35  Score=291.50  Aligned_cols=226  Identities=31%  Similarity=0.463  Sum_probs=189.2

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------------------C-----CcCe
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------------------S-----DEGY   92 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------------------~-----~~~~   92 (483)
                      +|.+.+.||+|++|.||+|++..+|..+|+|.+.....                                .     ...|
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            58999999999999999999999999999998875321                                0     1238


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|+||+.+ +|.+++....++++..+..++.||+.||.|||++|++|+||||+||++   +.++.++|+|||.+......
T Consensus        81 lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili---~~~~~~~L~dfg~~~~~~~~  156 (330)
T cd07834          81 IVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILV---NSNCDLKICDFGLARGVDPD  156 (330)
T ss_pred             EEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccCceEeeccc
Confidence            99999985 899999888899999999999999999999999999999999999999   56689999999999876544


Q ss_pred             c----eecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC-------
Q 048594          173 K----VYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD-------  240 (483)
Q Consensus       173 ~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-------  240 (483)
                      .    ......+++.|+|||.+.+. .++.++|+||+|+++|+|++|.+||.+.........+..........       
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  236 (330)
T cd07834         157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS  236 (330)
T ss_pred             ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence            2    23345678899999999877 68899999999999999999999998887766665554421111100       


Q ss_pred             --------------------CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          241 --------------------PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       241 --------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                                          ..+.+++.+.++|.+||+++|.+|||+++++.||||+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence                                123468899999999999999999999999999999833

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=7.6e-35  Score=291.19  Aligned_cols=230  Identities=29%  Similarity=0.461  Sum_probs=188.7

Q ss_pred             ccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------------------CC
Q 048594           42 KAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------------------SD   89 (483)
Q Consensus        42 ~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------------------~~   89 (483)
                      +....+.++|.+.+.||+|++|.||+|.+..++..||+|++.....                                ..
T Consensus         8 ~~~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   87 (343)
T cd07851           8 KTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS   87 (343)
T ss_pred             cceecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc
Confidence            3456788899999999999999999999999999999999864210                                01


Q ss_pred             ------cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeec
Q 048594           90 ------EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF  163 (483)
Q Consensus        90 ------~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Df  163 (483)
                            ..|+|+||+ |++|.+++.. .++++..+..++.||+.||.|||+.|++|+||+|+||++   +.++.++|+||
T Consensus        88 ~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill---~~~~~~kL~df  162 (343)
T cd07851          88 SLEDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDF  162 (343)
T ss_pred             cccccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEccc
Confidence                  138999998 5699998876 479999999999999999999999999999999999999   56788999999


Q ss_pred             ccceeccCCceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC----
Q 048594          164 GLAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK----  238 (483)
Q Consensus       164 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~----  238 (483)
                      |.+......  .....+++.|+|||.+.+ ..++.++||||+||++|+|++|+.||.+......+..+.......+    
T Consensus       163 g~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~  240 (343)
T cd07851         163 GLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL  240 (343)
T ss_pred             ccccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence            999875433  234567889999998865 3568899999999999999999999988776666555543211000    


Q ss_pred             -------------------C----CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          239 -------------------S----DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       239 -------------------~----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                         .    ..++.+++.+.+||.+||+.+|.+|||+.+++.||||..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~  303 (343)
T cd07851         241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE  303 (343)
T ss_pred             hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence                               0    012346889999999999999999999999999999983

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=3.4e-35  Score=287.76  Aligned_cols=226  Identities=29%  Similarity=0.540  Sum_probs=187.7

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------cCeEEEe
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------EGYLKRE   96 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------~~~lv~E   96 (483)
                      ....|.....||+|+||.||+|.++.+++.+|+|.+.......                              ..|+|+|
T Consensus        19 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e   98 (297)
T cd06659          19 PRSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLME   98 (297)
T ss_pred             chhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEe
Confidence            3344556678999999999999999999999999986533111                              1199999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-ee
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~  175 (483)
                      |+++++|..++.. ..+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+....... ..
T Consensus        99 ~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill---~~~~~~kL~dfg~~~~~~~~~~~~  174 (297)
T cd06659          99 FLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVPKR  174 (297)
T ss_pred             cCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE---ccCCcEEEeechhHhhcccccccc
Confidence            9999999987755 578999999999999999999999999999999999999   567899999999986543322 22


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....|++.|+|||.+.+..++.++|+||+||++|+|++|..||...........+...... ....+..++..+.++|.+
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~i~~  253 (297)
T cd06659         175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP-KLKNAHKISPVLRDFLER  253 (297)
T ss_pred             cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC-CccccCCCCHHHHHHHHH
Confidence            3456899999999998888899999999999999999999999887766666655443222 222335678899999999


Q ss_pred             hCccCCCCCCCHHHHHcCCcCC
Q 048594          256 MLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||+.+|.+||++.++++||||.
T Consensus       254 ~l~~~P~~Rps~~~ll~~~~~~  275 (297)
T cd06659         254 MLTREPQERATAQELLDHPFLL  275 (297)
T ss_pred             HhcCCcccCcCHHHHhhChhhc
Confidence            9999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=5.6e-35  Score=284.52  Aligned_cols=224  Identities=29%  Similarity=0.557  Sum_probs=187.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------CCcCeEEEecc
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------SDEGYLKREHC   98 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------~~~~~lv~E~~   98 (483)
                      .+|...+.||.|++|.||++.++.+++.+|+|.+.....                              .+..|+|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~   98 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL   98 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence            456677899999999999999999999999998854321                              11128999999


Q ss_pred             CCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-eecc
Q 048594           99 DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYEE  177 (483)
Q Consensus        99 ~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~~~  177 (483)
                      .|++|.+++.. .++++..+..++.||+.||+|||++|++||||+|+||++   +.++.++|+|||.+....... ....
T Consensus        99 ~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~d~g~~~~~~~~~~~~~~  174 (285)
T cd06648          99 EGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL---TSDGRVKLSDFGFCAQVSKEVPRRKS  174 (285)
T ss_pred             CCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE---cCCCcEEEcccccchhhccCCccccc
Confidence            99999999887 679999999999999999999999999999999999999   567899999999876543221 1223


Q ss_pred             cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhC
Q 048594          178 VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML  257 (483)
Q Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  257 (483)
                      ..|++.|+|||.+.+..++.++|+||+||++|+|++|..||...+.......+......... ....++..+.+||.+||
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l  253 (285)
T cd06648         175 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLK-NLHKVSPRLRSFLDRML  253 (285)
T ss_pred             ccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCc-ccccCCHHHHHHHHHHc
Confidence            46889999999998878899999999999999999999999887766666666554322211 22347889999999999


Q ss_pred             ccCCCCCCCHHHHHcCCcCC
Q 048594          258 IRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       258 ~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ..+|.+|||+.++++||||+
T Consensus       254 ~~~p~~Rpt~~~il~~~~~~  273 (285)
T cd06648         254 VRDPAQRATAAELLNHPFLA  273 (285)
T ss_pred             ccChhhCcCHHHHccCcccc
Confidence            99999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-35  Score=284.13  Aligned_cols=222  Identities=29%  Similarity=0.456  Sum_probs=179.8

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------CeEEEecc
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GYLKREHC   98 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~lv~E~~   98 (483)
                      |++.+.||.|++|.||+|.++.+|..||+|++........                                .|+++||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            6788999999999999999999999999999875431110                                19999999


Q ss_pred             CCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-ee
Q 048594           99 DGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VY  175 (483)
Q Consensus        99 ~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~  175 (483)
                      . ++|.+++....  .+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+....... ..
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~~~~  156 (283)
T cd07835          81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI---DREGALKLADFGLARAFGVPVRTY  156 (283)
T ss_pred             C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCcEEEeecccccccCCCcccc
Confidence            6 58999987765  79999999999999999999999999999999999999   567899999999987653221 22


Q ss_pred             cccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc-------------------
Q 048594          176 EEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI-------------------  235 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~-------------------  235 (483)
                      ....+++.|+|||++.+. .++.++|+||+|+++|+|++|.+||.+.........+.....                   
T Consensus       157 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd07835         157 THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPT  236 (283)
T ss_pred             CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhh
Confidence            234568889999988654 468899999999999999999999987765544433322110                   


Q ss_pred             ------CCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          236 ------DFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       236 ------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                            .......+.++..+.++|.+||+.+|.+|||+.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         237 FPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             cccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence                  00011134677899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=4.5e-35  Score=283.81  Aligned_cols=223  Identities=26%  Similarity=0.418  Sum_probs=186.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEEe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKRE   96 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E   96 (483)
                      .+-|++.+.||.|+||.||+|.++.++..+|+|.+.......                               ..|+|+|
T Consensus         3 ~~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   82 (277)
T cd06641           3 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME   82 (277)
T ss_pred             HHhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence            345888999999999999999999999999999986543111                               1189999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-ee
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~  175 (483)
                      |+.+++|.+++.. ..+++..+..++.|++.++.+||+.+++|+||+|+||++   +.++.++|+|||.+..+.... ..
T Consensus        83 ~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i---~~~~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06641          83 YLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKR  158 (277)
T ss_pred             eCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE---CCCCCEEEeecccceecccchhhh
Confidence            9999999999865 478999999999999999999999999999999999999   566789999999987654322 12


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....++..|+|||.+.+..++.++|+||+||++|+|++|..||...........+......   .....++.++.++|.+
T Consensus       159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~  235 (277)
T cd06641         159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPP---TLEGNYSKPLKEFVEA  235 (277)
T ss_pred             ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCC---CCCcccCHHHHHHHHH
Confidence            2346788999999998878889999999999999999999999876655555554433221   1223578999999999


Q ss_pred             hCccCCCCCCCHHHHHcCCcCC
Q 048594          256 MLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||..+|.+||++.++++||||.
T Consensus       236 ~l~~~p~~Rp~~~~~l~~~~~~  257 (277)
T cd06641         236 CLNKEPSFRPTAKELLKHKFIV  257 (277)
T ss_pred             HccCChhhCcCHHHHHhCHHHh
Confidence            9999999999999999999998

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1e-36  Score=272.65  Aligned_cols=228  Identities=28%  Similarity=0.468  Sum_probs=193.1

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC----------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG----------------------------------   91 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------   91 (483)
                      +....|.-+..||+|.||.||+|+++.+|+.||+|.+.........                                  
T Consensus        14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~   93 (376)
T KOG0669|consen   14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTN   93 (376)
T ss_pred             ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence            3345677888999999999999999999999999987654322221                                  


Q ss_pred             ------eEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           92 ------YLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        92 ------~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                            |+|+.+|+. +|.-.+.+. -+++..++..++++++.||.|+|...|+|||+||+|+|+   +..+.+||+|||
T Consensus        94 r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI---t~dgilklADFG  169 (376)
T KOG0669|consen   94 RDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI---TKDGILKLADFG  169 (376)
T ss_pred             cccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE---cCCceEEeeccc
Confidence                  999999987 898888776 689999999999999999999999999999999999999   677899999999


Q ss_pred             cceeccCC-----ceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC
Q 048594          165 LAFFFEEG-----KVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK  238 (483)
Q Consensus       165 ~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  238 (483)
                      +++.+...     ..+...+.|.+|++||.+.+ ..|+++.|+|..|||+.+|+++.+.+.+.+...++..|..-.-.+.
T Consensus       170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t  249 (376)
T KOG0669|consen  170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT  249 (376)
T ss_pred             cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence            99776532     22344566999999998766 4689999999999999999999999999999999888875544444


Q ss_pred             CCCCCCC-------------------------------CHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          239 SDPWPTI-------------------------------SSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       239 ~~~~~~~-------------------------------~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+.||++                               .+++.+++.+||..||.+|++++++|+|.||.
T Consensus       250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~  319 (376)
T KOG0669|consen  250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFW  319 (376)
T ss_pred             cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhh
Confidence            4444432                               35788999999999999999999999999998

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-36  Score=267.23  Aligned_cols=221  Identities=28%  Similarity=0.381  Sum_probs=180.8

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-----------------------------------Ce
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-----------------------------------GY   92 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-----------------------------------~~   92 (483)
                      .+||++.+.||.|||+-||++++-.+++.||+|.+......+.                                   .|
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y   99 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY   99 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence            4699999999999999999999999999999999987652211                                   19


Q ss_pred             EEEeccCCCChHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--CeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           93 LKREHCDGGTLVDRISDR----ERYTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~----~~l~~~~~~~i~~qil~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                      |+++|...|+|.+.+...    ..++|..+..|+.+|++||.+||...  ++||||||.|||+   ...+.++|.|||.+
T Consensus       100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl---s~~~~~vl~D~GS~  176 (302)
T KOG2345|consen  100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL---SDSGLPVLMDLGSA  176 (302)
T ss_pred             EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe---cCCCceEEEeccCc
Confidence            999999999999998753    36999999999999999999999998  9999999999999   56789999999998


Q ss_pred             eeccCC---ce-------ecccccCCcccCccccCC---CCCCCcCchHHHHHHHHHHhhCCCCCCCCCh--HHHHHHHH
Q 048594          167 FFFEEG---KV-------YEEVVGTPLYMAPELLGP---CKYGKEIDIWSAGLILYNLLSGAQPFWAESL--YGTLTAIM  231 (483)
Q Consensus       167 ~~~~~~---~~-------~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~~ll~g~~pf~~~~~--~~~~~~i~  231 (483)
                      ....-.   ..       ......|..|+|||.+.-   ...+.++|||||||++|.|+.|..||.....  ....-++.
T Consensus       177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~  256 (302)
T KOG2345|consen  177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQ  256 (302)
T ss_pred             cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeee
Confidence            764311   00       012356899999999853   3457899999999999999999999943221  11222344


Q ss_pred             ccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ++.+.+|...  .+|..+.++|++||+.||.+||++.+++.+
T Consensus       257 n~q~s~P~~~--~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  257 NAQISIPNSS--RYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             ccccccCCCC--CccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            5566666554  389999999999999999999999999864

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=8.8e-35  Score=277.99  Aligned_cols=222  Identities=29%  Similarity=0.503  Sum_probs=185.6

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E~   97 (483)
                      +|.+.+.||+|++|.||+|.++.+|..+|+|.+.......                                ..|+|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            5899999999999999999999999999999986542110                                11899999


Q ss_pred             cCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           98 CDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        98 ~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      +.+++|.+++....  .+++..+..++.||+.||.|||+.+++|+||+|+||+++.  ....++|+|||.+........ 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~~~l~d~~~~~~~~~~~~~  158 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK--NGMVAKLGDFGIARQLNDSMEL  158 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC--CCCeEEecccccchhccCCccc
Confidence            99999999987643  5799999999999999999999999999999999999942  224579999999876643321 


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .....|++.|+|||.+.+..++.++|+||+|+++++|++|..||...+.......+......   ...+.++.+++++|.
T Consensus       159 ~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~  235 (257)
T cd08225         159 AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFA---PISPNFSRDLRSLIS  235 (257)
T ss_pred             ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCC---CCCCCCCHHHHHHHH
Confidence            22346888999999998878899999999999999999999999877766666655544332   122467889999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcC
Q 048594          255 RMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      +||..+|++|||+.+++.||||
T Consensus       236 ~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         236 QLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             HHhccChhhCcCHHHHhhCCCC
Confidence            9999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-36  Score=310.46  Aligned_cols=228  Identities=31%  Similarity=0.480  Sum_probs=188.9

Q ss_pred             cccccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------
Q 048594           39 ILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------   88 (483)
Q Consensus        39 ~~~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------   88 (483)
                      ..++....=..++++.++|.+|||+.||+|.+...|..||+|++-..+..                              
T Consensus        27 ~~G~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~  106 (738)
T KOG1989|consen   27 FVGQTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAI  106 (738)
T ss_pred             CCceEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccc
Confidence            34455455566899999999999999999999988899999998654310                              


Q ss_pred             --------CcCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC--CeeeCCCCCeEEEeeCCCCC
Q 048594           89 --------DEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENA  156 (483)
Q Consensus        89 --------~~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~  156 (483)
                              -+.+|.||||.||.|.+++...  ..|+|.++.+|+.++++|+.+||...  |||||||-+|||+   +.++
T Consensus       107 ~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl---s~~g  183 (738)
T KOG1989|consen  107 NRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL---SADG  183 (738)
T ss_pred             cccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE---cCCC
Confidence                    0118999999999999999853  56999999999999999999999998  9999999999999   6778


Q ss_pred             cEEEeecccceeccCCc-ee---------cccccCCcccCcccc---CCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh
Q 048594          157 TLKATDFGLAFFFEEGK-VY---------EEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL  223 (483)
Q Consensus       157 ~ikl~Dfg~a~~~~~~~-~~---------~~~~gt~~y~aPE~~---~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~  223 (483)
                      .+||||||.|.-..... ..         -....|+.|+|||.+   .+...+.|+|||||||+||.|+....||.... 
T Consensus       184 ~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg-  262 (738)
T KOG1989|consen  184 NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG-  262 (738)
T ss_pred             CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc-
Confidence            99999999986432221 11         113569999999976   57788999999999999999999999996542 


Q ss_pred             HHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCc
Q 048594          224 YGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW  275 (483)
Q Consensus       224 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~  275 (483)
                         .-+|+++.+.+|.  ++.++..+.+||..||+.||.+||++.|++.+-+
T Consensus       263 ---~laIlng~Y~~P~--~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~  309 (738)
T KOG1989|consen  263 ---KLAILNGNYSFPP--FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF  309 (738)
T ss_pred             ---ceeEEeccccCCC--CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence               2367777777765  4689999999999999999999999999987643

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=7.3e-35  Score=278.62  Aligned_cols=218  Identities=27%  Similarity=0.458  Sum_probs=184.2

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeEEEecc
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYLKREHC   98 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E~~   98 (483)
                      +|.+.+.||.|++|.||++.++.++..+|+|.+......                               ...|+|+||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            588999999999999999999999999999998643211                               0119999999


Q ss_pred             CCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-ee
Q 048594           99 DGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VY  175 (483)
Q Consensus        99 ~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~  175 (483)
                      ++++|.+++...  ..+++..+..++.||+.||.|||++|++|+||+|+||++   +.++.++|+|||.+....... ..
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~~~~~  157 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLLTSPGAYA  157 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---CCCCcEEEcccCcceeeccccccc
Confidence            999999988653  458999999999999999999999999999999999999   667789999999998764322 22


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....|++.|+|||++.+..++.++|+||+|+++|+|++|..||...+.......+..+.....   ...++..+.++|.+
T Consensus       158 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~  234 (255)
T cd08219         158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPL---PSHYSYELRSLIKQ  234 (255)
T ss_pred             ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCC---CcccCHHHHHHHHH
Confidence            345688999999999888889999999999999999999999988777666666655443321   23578899999999


Q ss_pred             hCccCCCCCCCHHHHHcC
Q 048594          256 MLIRDPNNQITVAQILKH  273 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h  273 (483)
                      ||++||.+|||+.+++.-
T Consensus       235 ~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         235 MFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHhCCcccCCCHHHHhhc
Confidence            999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=4.6e-36  Score=275.82  Aligned_cols=229  Identities=29%  Similarity=0.451  Sum_probs=180.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCC----EEEEEEeccCCCCCcC---------------------------------
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGL----QFACKSISKTSKSDEG---------------------------------   91 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~~avK~~~~~~~~~~~---------------------------------   91 (483)
                      ..|+....||+|.||.||+|..+.++-    .||+|.++........                                 
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            469999999999999999997766643    7899999876432221                                 


Q ss_pred             eEEEeccCCCChHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC-CCCCcEEEeeccc
Q 048594           92 YLKREHCDGGTLVDRISDR-----ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD-DENATLKATDFGL  165 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~-~~~~~ikl~Dfg~  165 (483)
                      ++++||.+- +|.+.|.-.     +.++...+..+++||+.|+.|||++-|+||||||.|||+..+ .+.|.|||+|+|+
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGl  182 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGL  182 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccH
Confidence            999999987 899988632     468999999999999999999999999999999999999754 3458999999999


Q ss_pred             ceeccCCc----eecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCC---------hHHHHHHHH
Q 048594          166 AFFFEEGK----VYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAES---------LYGTLTAIM  231 (483)
Q Consensus       166 a~~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~---------~~~~~~~i~  231 (483)
                      ++.+...-    .....+.|.+|+|||.+.+. .|+++.|+||+|||+.||++-.+.|.+..         ..+++..|.
T Consensus       183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf  262 (438)
T KOG0666|consen  183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIF  262 (438)
T ss_pred             HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHH
Confidence            99775321    22345679999999988764 58999999999999999999999996632         233444444


Q ss_pred             ccccCCCCCCCC---------------------------------CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          232 SREIDFKSDPWP---------------------------------TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       232 ~~~~~~~~~~~~---------------------------------~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      .---......||                                 .-++.+.+|+.+||+.||.+|+|++++|+|+||..
T Consensus       263 ~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~  342 (438)
T KOG0666|consen  263 EVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTE  342 (438)
T ss_pred             HHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccccc
Confidence            321111111121                                 12456889999999999999999999999999983

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=4e-35  Score=284.87  Aligned_cols=219  Identities=21%  Similarity=0.270  Sum_probs=182.6

Q ss_pred             cceEEeeeecccCceeEEEEEECCCC-----CEEEEEEeccCCCC-------------------------------CcCe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTG-----LQFACKSISKTSKS-------------------------------DEGY   92 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~-------------------------------~~~~   92 (483)
                      ++|++.+.||+|++|.||+|.+...+     ..+|+|.+......                               ...|
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            47899999999999999999987655     68999998653211                               1128


Q ss_pred             EEEeccCCCChHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCC
Q 048594           93 LKREHCDGGTLVDRISDR----------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA  156 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~  156 (483)
                      +++||+++++|.+++...                ..+++..+..++.||+.||.|||+++++|+||||+||++   +.++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~---~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV---GEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE---cCCC
Confidence            999999999999999764                457889999999999999999999999999999999999   5677


Q ss_pred             cEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHc
Q 048594          157 TLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS  232 (483)
Q Consensus       157 ~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~  232 (483)
                      .++|+|||++........   .....+++.|+|||.+.+..++.++|+||+||++|+|++ |..||.+....+....+..
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~  241 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRS  241 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            899999999876533221   223456788999999988889999999999999999998 9999998887777777665


Q ss_pred             cccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          233 REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .....   ....+|+++.+++.+||+.||.+|||+.+++++
T Consensus       242 ~~~~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         242 RQLLP---CPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             CCcCC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            54322   224678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=1.2e-34  Score=282.87  Aligned_cols=224  Identities=26%  Similarity=0.377  Sum_probs=174.6

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------CeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------GYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~~lv~E~   97 (483)
                      .+|.+.+.||+|++|.||+|.++.+|..+|+|++........                               .|+|+||
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY   84 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence            579999999999999999999999999999999875432111                               1899999


Q ss_pred             cCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-cee
Q 048594           98 CDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~  175 (483)
                      +. ++|.+++.. ...+++..+..++.||+.||.|||+.+++|+||||+||++   +.++.++|+|||.+...... ...
T Consensus        85 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~~~  160 (291)
T cd07870          85 MH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI---SYLGELKLADFGLARAKSIPSQTY  160 (291)
T ss_pred             cc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---cCCCcEEEeccccccccCCCCCCC
Confidence            96 577776654 4568899999999999999999999999999999999999   56778999999998754321 122


Q ss_pred             cccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHccc--------------cCCCC
Q 048594          176 EEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLY-GTLTAIMSRE--------------IDFKS  239 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~-~~~~~i~~~~--------------~~~~~  239 (483)
                      ....+++.|+|||.+.+. .++.++|+||+||++|+|++|..||.+.... +.+..+....              ..+..
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (291)
T cd07870         161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKP  240 (291)
T ss_pred             CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccc
Confidence            334578899999998653 4788999999999999999999999765432 2222221100              00000


Q ss_pred             C------------CCC--CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          240 D------------PWP--TISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       240 ~------------~~~--~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .            .+.  ..++.+.+++.+||+.||++|||+.+++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         241 EWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             hhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            0            001  125789999999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.2e-34  Score=275.33  Aligned_cols=222  Identities=32%  Similarity=0.531  Sum_probs=186.0

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEEeccC
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKREHCD   99 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~E~~~   99 (483)
                      +|.+.+.||+|++|.||++.++.++..+++|++......                              ...++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            488999999999999999999999999999999775420                              11189999999


Q ss_pred             CCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceeccc
Q 048594          100 GGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV  178 (483)
Q Consensus       100 g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~  178 (483)
                      |++|.+++... .++++..+..++.|++.+|.+||..|++|+||+|+||++   +.++.++|+|||.+............
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~~~~  157 (253)
T cd05122          81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL---TSDGEVKLIDFGLSAQLSDTKARNTM  157 (253)
T ss_pred             CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEE---ccCCeEEEeeccccccccccccccce
Confidence            99999999776 689999999999999999999999999999999999999   56788999999998876554323455


Q ss_pred             ccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCc
Q 048594          179 VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI  258 (483)
Q Consensus       179 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  258 (483)
                      .++..|+|||.+.+..++.++|+||+|+++|+|++|..||...+.......+....... ......++..+.++|.+||+
T Consensus       158 ~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~  236 (253)
T cd05122         158 VGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPG-LRNPEKWSDEFKDFLKKCLQ  236 (253)
T ss_pred             ecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCC-cCcccccCHHHHHHHHHHcc
Confidence            78889999999988788999999999999999999999998765544444443322111 11112348899999999999


Q ss_pred             cCCCCCCCHHHHHcCCc
Q 048594          259 RDPNNQITVAQILKHPW  275 (483)
Q Consensus       259 ~dP~~R~t~~e~L~h~~  275 (483)
                      .||++|||+.+++.|||
T Consensus       237 ~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         237 KNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             CChhhCCCHHHHhcCCC
Confidence            99999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=8.3e-35  Score=290.82  Aligned_cols=228  Identities=26%  Similarity=0.423  Sum_probs=182.9

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------------   88 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------------   88 (483)
                      ++..+|.+.+.||.|++|.||+|.++.+|..||+|.+......                                     
T Consensus         2 ~~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   81 (342)
T cd07854           2 DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED   81 (342)
T ss_pred             CcCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence            4568999999999999999999999999999999998653211                                     


Q ss_pred             -------CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEe
Q 048594           89 -------DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKAT  161 (483)
Q Consensus        89 -------~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~  161 (483)
                             ...|+|+||+.+ +|.+++.. .++++..+..++.||+.||.|||+.|++||||||+||++.  ..++.++|+
T Consensus        82 ~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~--~~~~~~kl~  157 (342)
T cd07854          82 VGSLTELNSVYIVQEYMET-DLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN--TEDLVLKIG  157 (342)
T ss_pred             cccccccceEEEEeecccc-cHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc--CCCceEEEC
Confidence                   012699999975 89888864 4799999999999999999999999999999999999995  244679999


Q ss_pred             ecccceeccCCc----eecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC
Q 048594          162 DFGLAFFFEEGK----VYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID  236 (483)
Q Consensus       162 Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~  236 (483)
                      |||.+..+....    ......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+.......+......
T Consensus       158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~  237 (342)
T cd07854         158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV  237 (342)
T ss_pred             CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            999987653221    1122357889999997654 45788999999999999999999999877665554444322110


Q ss_pred             ----------------------CCC----CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          237 ----------------------FKS----DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       237 ----------------------~~~----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                            .+.    ...+.++.++.+||.+||+.||.+|||+.++|.||||+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~  304 (342)
T cd07854         238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMS  304 (342)
T ss_pred             CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccc
Confidence                                  000    01235788999999999999999999999999999997

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=7.7e-35  Score=282.89  Aligned_cols=223  Identities=28%  Similarity=0.458  Sum_probs=180.5

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEEecc
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKREHC   98 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E~~   98 (483)
                      +|++.+.||.|++|.||+|+++.+|..||+|.+.......                               ..|+|+||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            4899999999999999999999999999999987653211                               119999999


Q ss_pred             CCCChHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ce
Q 048594           99 DGGTLVDRISDR---ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KV  174 (483)
Q Consensus        99 ~g~~L~~~l~~~---~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~  174 (483)
                      .+ +|.+++...   .++++..+..++.||+.||.|||+.|++|+||+|+||++   +.++.++|+|||.+...... ..
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~---~~~~~~~l~d~g~~~~~~~~~~~  156 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI---NKRGELKLADFGLARAFGIPVNT  156 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCcEEEeecchhhhhcCCccc
Confidence            86 888888654   368999999999999999999999999999999999999   56778999999998755322 12


Q ss_pred             ecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-----------------
Q 048594          175 YEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-----------------  236 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----------------  236 (483)
                      .....+++.|+|||.+.+. .++.++|+||+||++|+|++|..||.+.+..+....+......                 
T Consensus       157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd07836         157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP  236 (284)
T ss_pred             cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence            2334678899999988653 4688999999999999999999999887665554444321100                 


Q ss_pred             -CCC-------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 -FKS-------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 -~~~-------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                       ++.       ...+..++.++++|.+||+.||.+||++.++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence             000       0013457889999999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=1.7e-35  Score=286.79  Aligned_cols=223  Identities=27%  Similarity=0.416  Sum_probs=184.5

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEEe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKRE   96 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E   96 (483)
                      .+.|...+.||+|++|.||+|.+..++..+|+|.+.......                               ..|+|+|
T Consensus         3 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (277)
T cd06642           3 EELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME   82 (277)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence            456788899999999999999999999999999987543111                               1199999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-e
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-Y  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-~  175 (483)
                      |+.+++|.+++.. .++++..+..++.||+.|+.|||+++++|+||+|+||++   +.++.++|+|||.+..+..... .
T Consensus        83 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06642          83 YLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKR  158 (277)
T ss_pred             ccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEE---eCCCCEEEccccccccccCcchhh
Confidence            9999999998865 578999999999999999999999999999999999999   5667899999999876543321 2


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....++..|+|||.+.+..++.++|+||+||++|+|++|..||...........+......   .....++.++.++|.+
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~  235 (277)
T cd06642         159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPP---TLEGQYSKPFKEFVEA  235 (277)
T ss_pred             hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCC---CCCcccCHHHHHHHHH
Confidence            2346788999999998888899999999999999999999999765554444443332211   1113467889999999


Q ss_pred             hCccCCCCCCCHHHHHcCCcCC
Q 048594          256 MLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||..+|.+|||+.++++||||.
T Consensus       236 ~l~~~p~~Rp~~~~il~~~~~~  257 (277)
T cd06642         236 CLNKDPRFRPTAKELLKHKFIT  257 (277)
T ss_pred             HccCCcccCcCHHHHHHhHHHH
Confidence            9999999999999999999997

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-34  Score=277.01  Aligned_cols=222  Identities=24%  Similarity=0.455  Sum_probs=184.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------------CcC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------------DEG   91 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------------~~~   91 (483)
                      ..|.+.+.||+|++|.||+|.++.+|..+|+|.+......                                     ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4799999999999999999999999999999987532100                                     011


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      ++++||+++++|.+++...+++++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||.+.....
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~  158 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRIQT  158 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECcccccccccc
Confidence            7899999999999999887889999999999999999999999999999999999999   5677899999999876532


Q ss_pred             C----ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          172 G----KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       172 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      .    .......++..|+|||.+.+..++.++|+||+||++|+|++|..||...........+......  ....+.++.
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~p~~~~~  236 (264)
T cd06653         159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTK--PMLPDGVSD  236 (264)
T ss_pred             ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCC--CCCCcccCH
Confidence            1    1122356888999999998878899999999999999999999999876655555444432221  122356889


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .+.++|.+||+ +|.+|||+.+++.|||+
T Consensus       237 ~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         237 ACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence            99999999999 57999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=6.8e-35  Score=285.10  Aligned_cols=229  Identities=29%  Similarity=0.510  Sum_probs=187.3

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKR   95 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~   95 (483)
                      +...+|.+.+.||+|+||.||++.+..++..+|+|.+......                              ...|+|+
T Consensus        16 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~   95 (293)
T cd06647          16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM   95 (293)
T ss_pred             CchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence            3357899999999999999999999999999999998653211                              1119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-e
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-V  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~  174 (483)
                      ||+++++|.+++.+. .+++..+..++.||+.||.|||++|++|+||+|+||++   +..+.++|+|||.+....... .
T Consensus        96 e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili---~~~~~~kL~dfg~~~~~~~~~~~  171 (293)
T cd06647          96 EYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK  171 (293)
T ss_pred             ecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEE---cCCCCEEEccCcceecccccccc
Confidence            999999999998754 68899999999999999999999999999999999999   566789999999887654322 2


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .....+++.|+|||.+....++.++|+||+|+++|++++|..||...+.......+...... .......++..++++|.
T Consensus       172 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~  250 (293)
T cd06647         172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIFRDFLN  250 (293)
T ss_pred             cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCC-CCCCccccCHHHHHHHH
Confidence            23346888999999998878899999999999999999999999876654443333222111 11122356788999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          255 RMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                      +||..+|.+||++.+++.||||+..
T Consensus       251 ~~l~~~p~~Rp~~~~il~h~~~~~~  275 (293)
T cd06647         251 RCLEMDVEKRGSAKELLQHPFLKIA  275 (293)
T ss_pred             HHccCChhhCcCHHHHhcCHHHhcC
Confidence            9999999999999999999999833

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.6e-34  Score=281.52  Aligned_cols=225  Identities=29%  Similarity=0.478  Sum_probs=182.0

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~   95 (483)
                      ++|...+.||.|++|.||+|.++.+++.+|+|.+......                                 ...|+||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            4689999999999999999999999999999998754211                                 0128999


Q ss_pred             eccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           96 EHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        96 E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      ||++|++|.+++..    ...+++..+..++.||+.||.|||+.+++|+||+|+||++   +..+.++|+|||++.....
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~~~  157 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL---TRKGQVKLCDFGVSGELVN  157 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---ecCCeEEEeeccccccccc
Confidence            99999999887653    3568999999999999999999999999999999999999   5667899999999876543


Q ss_pred             CceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC-----hHHHHHHHHcccc-CCCCCCC--C
Q 048594          172 GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES-----LYGTLTAIMSREI-DFKSDPW--P  243 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~-----~~~~~~~i~~~~~-~~~~~~~--~  243 (483)
                      .. .....++..|+|||.+.+..++.++|+||+|+++|+|++|..||....     ..+....+..... .......  .
T Consensus       158 ~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd06621         158 SL-AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGI  236 (287)
T ss_pred             cc-cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCC
Confidence            22 123467888999999988889999999999999999999999997652     2333333333221 1111111  1


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ..++.+.+||.+||.++|.+|||+.|++.||||.
T Consensus       237 ~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~  270 (287)
T cd06621         237 KWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK  270 (287)
T ss_pred             chHHHHHHHHHHHcCCCcccCCCHHHHHhCcccc
Confidence            3467899999999999999999999999999997

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-36  Score=294.78  Aligned_cols=229  Identities=31%  Similarity=0.491  Sum_probs=205.6

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC---------------------------------eEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG---------------------------------YLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~---------------------------------~lv~   95 (483)
                      .+..++..||-|+||.|=++..+.....+|+|.+++....+..                                 |+.|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm  499 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM  499 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence            3456788899999999999998877777999999886533221                                 9999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      |-|-||+|...+...+.+.+.+++.++.=+++|++|||++|||+|||||+|+++   +.+|.+||.|||+|..+..+...
T Consensus       500 EaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~g~KT  576 (732)
T KOG0614|consen  500 EACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGSGRKT  576 (732)
T ss_pred             HhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhccCCce
Confidence            999999999999999999999999999999999999999999999999999999   78899999999999999999989


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      .+.||||.|.|||++.......++|.||||+++||||+|.+||.+.+...++..|.++.-.+..+  ..++..+.++|++
T Consensus       577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P--r~I~k~a~~Lik~  654 (732)
T KOG0614|consen  577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP--RRITKTATDLIKK  654 (732)
T ss_pred             eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc--cccchhHHHHHHH
Confidence            99999999999999999889999999999999999999999999999999999998876443332  3678899999999


Q ss_pred             hCccCCCCCCC-----HHHHHcCCcCCCCCCC
Q 048594          256 MLIRDPNNQIT-----VAQILKHPWLNYENGE  282 (483)
Q Consensus       256 ~L~~dP~~R~t-----~~e~L~h~~~~~~~~~  282 (483)
                      +..-+|.+|..     +.++.+|.||...+++
T Consensus       655 LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdwe  686 (732)
T KOG0614|consen  655 LCRDNPTERLGYQKGGINDIKKHRWFEGFDWE  686 (732)
T ss_pred             HHhcCcHhhhccccCChHHHHhhhhhhcCChh
Confidence            99999999986     7899999999865543

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=1.4e-34  Score=282.76  Aligned_cols=226  Identities=27%  Similarity=0.432  Sum_probs=179.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------CeEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GYLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~lv~E   96 (483)
                      ++|.+.+.||.|++|+||+|.++.+|+.||+|.+........                                .|+|+|
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            579999999999999999999999999999999865432111                                199999


Q ss_pred             ccCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-c
Q 048594           97 HCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-K  173 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~  173 (483)
                      |+.+ +|.+.+....  .+++..+..++.||+.||+|||+++++|+||+|+||+++.  ....+||+|||.+...... .
T Consensus        82 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--~~~~~kl~dfg~~~~~~~~~~  158 (294)
T PLN00009         82 YLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--RTNALKLADFGLARAFGIPVR  158 (294)
T ss_pred             cccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--CCCEEEEcccccccccCCCcc
Confidence            9965 7888876543  3578899999999999999999999999999999999952  3457999999998754322 2


Q ss_pred             eecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC----------------
Q 048594          174 VYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID----------------  236 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~----------------  236 (483)
                      ......+++.|+|||.+.+. .++.++|+||+||++|+|++|.+||......+....+......                
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (294)
T PLN00009        159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK  238 (294)
T ss_pred             ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence            22334678899999988653 4688999999999999999999999877665555443321000                


Q ss_pred             -----CCCC----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          237 -----FKSD----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       237 -----~~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                           +...    ..+.+++++.++|.+||+.+|.+||++.+++.||||.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~  288 (294)
T PLN00009        239 SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK  288 (294)
T ss_pred             hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHh
Confidence                 0000    1245788999999999999999999999999999997

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=9.9e-35  Score=278.49  Aligned_cols=216  Identities=36%  Similarity=0.573  Sum_probs=184.8

Q ss_pred             ecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEEeccCCCCh
Q 048594           57 LCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKREHCDGGTL  103 (483)
Q Consensus        57 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~E~~~g~~L  103 (483)
                      ||.|++|.||+|.+..+|+.+|+|++......                                 ...|+++||+.|++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            68999999999999999999999998754321                                 111999999999999


Q ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc---------e
Q 048594          104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---------V  174 (483)
Q Consensus       104 ~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~---------~  174 (483)
                      .+++...+.+++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||++.......         .
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  157 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI---DSNGHLKLTDFGLSKVGLVRRQINLNDDEKE  157 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE---cCCCCEEEEecccchhcccCccccccccccc
Confidence            9999887889999999999999999999999999999999999999   567789999999887543221         1


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .....+++.|+|||.+....++.++|+||||+++|+|++|..||...........+..+...++.  ...++..+.+||.
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~  235 (265)
T cd05579         158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPE--DVEVSDEAIDLIS  235 (265)
T ss_pred             ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCc--cccCCHHHHHHHH
Confidence            23346788899999998877889999999999999999999999888877777777665444332  1235899999999


Q ss_pred             HhCccCCCCCCCH---HHHHcCCcCC
Q 048594          255 RMLIRDPNNQITV---AQILKHPWLN  277 (483)
Q Consensus       255 ~~L~~dP~~R~t~---~e~L~h~~~~  277 (483)
                      +||+.+|.+|||+   .++|+||||+
T Consensus       236 ~~l~~~p~~Rpt~~~~~~~l~~~~~~  261 (265)
T cd05579         236 KLLVPDPEKRLGAKSIEEIKNHPFFK  261 (265)
T ss_pred             HHhcCCHhhcCCCccHHHHhcCcccc
Confidence            9999999999999   9999999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=9.3e-35  Score=279.97  Aligned_cols=218  Identities=15%  Similarity=0.238  Sum_probs=180.3

Q ss_pred             cceEEeeeecccCceeEEEEEEC---CCCCEEEEEEeccCCCC-------------------------------CcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTEN---STGLQFACKSISKTSKS-------------------------------DEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~-------------------------------~~~~lv   94 (483)
                      .+|++.+.||+|+||.||+|.++   ..+..+|+|.+......                               ...|+|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            46999999999999999999875   45678999998764211                               111999


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |||+.+++|.+++... ..+++..+..++.||+.||+|||+++++||||||+||++   +.++.++++|||.+.......
T Consensus        85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili---~~~~~~~l~dfg~~~~~~~~~  161 (266)
T cd05064          85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV---NSDLVCKISGFRRLQEDKSEA  161 (266)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE---cCCCcEEECCCcccccccccc
Confidence            9999999999999764 578999999999999999999999999999999999999   567899999999876543221


Q ss_pred             eec--ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          174 VYE--EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       174 ~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      ...  ...++..|+|||.+.+..++.++||||+||++|++++ |..||.+.........+......   +..+.++..+.
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  238 (266)
T cd05064         162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL---PAPRNCPNLLH  238 (266)
T ss_pred             hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC---CCCCCCCHHHH
Confidence            111  2234678999999988889999999999999999775 99999988887777777654321   22356789999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHc
Q 048594          251 DLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +++.+||+.+|.+|||+.++++
T Consensus       239 ~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         239 QLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHHHHHcCCCchhCCCHHHHHH
Confidence            9999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=1.2e-34  Score=288.68  Aligned_cols=230  Identities=28%  Similarity=0.375  Sum_probs=185.5

Q ss_pred             ccccceEE-eeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------------
Q 048594           46 DIKLHFTI-AEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------------   89 (483)
Q Consensus        46 ~i~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------------   89 (483)
                      .+.++|.. .+.||+|++|+||+|.++.+++.||+|.+.......                                   
T Consensus         5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   84 (335)
T PTZ00024          5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMG   84 (335)
T ss_pred             ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceee
Confidence            46677875 577999999999999999999999999986543211                                   


Q ss_pred             ---------cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEE
Q 048594           90 ---------EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA  160 (483)
Q Consensus        90 ---------~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl  160 (483)
                               ..|+||||+.| +|.+++.....+++..+..++.||+.||.|||+.|++|+||+|+||++   +..+.++|
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill---~~~~~~kl  160 (335)
T PTZ00024         85 LVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI---NSKGICKI  160 (335)
T ss_pred             eeEEEecCCcEEEEEecccc-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE---CCCCCEEE
Confidence                     01899999975 899999888889999999999999999999999999999999999999   56778999


Q ss_pred             eecccceeccCC---------------ceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChH
Q 048594          161 TDFGLAFFFEEG---------------KVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLY  224 (483)
Q Consensus       161 ~Dfg~a~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~  224 (483)
                      +|||.+......               .......+++.|+|||.+.+. .++.++|+||+||++|+|++|.+||.+....
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~  240 (335)
T PTZ00024        161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI  240 (335)
T ss_pred             CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            999998765411               111223567889999988664 3688999999999999999999999888776


Q ss_pred             HHHHHHHccccCCCCC------------------------CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          225 GTLTAIMSREIDFKSD------------------------PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       225 ~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                      ..+..+..........                        ..+..+.++.++|.+||.++|++|||++++|.||||+..
T Consensus       241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~  319 (335)
T PTZ00024        241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD  319 (335)
T ss_pred             HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence            6655544311100000                        123457889999999999999999999999999999843

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=1.9e-34  Score=275.39  Aligned_cols=220  Identities=29%  Similarity=0.426  Sum_probs=188.2

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E~   97 (483)
                      +|++.+.||+|++|.||++.++.++..+|+|.+.......                                ..|+|+||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            5899999999999999999999999999999987543111                                11999999


Q ss_pred             cCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           98 CDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        98 ~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      +++++|.+++..    ...+++..+..++.||+.||.|||+.|++|+||+|+||+++   ..+.++|+|||.+...... 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~---~~~~~kl~d~g~~~~~~~~-  156 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV---ANDLVKIGDLGISKVLKKN-  156 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe---cCCcEEEeeccchhhhccC-
Confidence            999999999876    35789999999999999999999999999999999999994   5678999999999776544 


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ......+++.|+|||.+.+..++.++|+||+|+++++|++|..||...+.......+........   ...++.+++++|
T Consensus       157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li  233 (256)
T cd08530         157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPI---PPIYSQDLQNFI  233 (256)
T ss_pred             CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC---chhhCHHHHHHH
Confidence            33345688899999999888889999999999999999999999988877666666655433221   136788999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .+||..+|.+|||+.++++||++
T Consensus       234 ~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         234 RSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             HHHcCCCcccCCCHHHHhcCCCC
Confidence            99999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1e-34  Score=281.34  Aligned_cols=222  Identities=20%  Similarity=0.307  Sum_probs=181.6

Q ss_pred             cceEEeeeecccCceeEEEEEECC-----CCCEEEEEEeccCCCC-------------------------------CcCe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENS-----TGLQFACKSISKTSKS-------------------------------DEGY   92 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~~-------------------------------~~~~   92 (483)
                      +.|.+.+.||+|++|.||+|.++.     ++..+|+|.+......                               ...|
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF   85 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence            569999999999999999999987     7889999988643211                               1118


Q ss_pred             EEEeccCCCChHHHHhcCC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           93 LKREHCDGGTLVDRISDRE-------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~-------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                      +|+||+.|++|.+++...+       .+++..+..++.||+.||+|||+++++|+||+|+||++...+....+||+|||.
T Consensus        86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~  165 (277)
T cd05036          86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGM  165 (277)
T ss_pred             EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCcc
Confidence            9999999999999997653       589999999999999999999999999999999999997544456799999999


Q ss_pred             ceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCC
Q 048594          166 AFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDP  241 (483)
Q Consensus       166 a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~  241 (483)
                      +.........   .....++.|+|||++.+..++.++|||||||++|+|++ |..||.+.........+.....   ...
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~---~~~  242 (277)
T cd05036         166 ARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGR---LDP  242 (277)
T ss_pred             ccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc---CCC
Confidence            8865322211   12223567999999988889999999999999999997 9999988777766666554321   112


Q ss_pred             CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          242 WPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       242 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ...++..+.+++.+||+.+|++|||+.++++|
T Consensus       243 ~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         243 PKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            24678999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=3.2e-34  Score=282.18  Aligned_cols=224  Identities=25%  Similarity=0.420  Sum_probs=184.5

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcC
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEG   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~   91 (483)
                      .....+|.+.+.||+|++|.||+|.++.+|+.||+|.+......                                 ...
T Consensus        11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~   90 (307)
T cd06607          11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTA   90 (307)
T ss_pred             CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeE
Confidence            45567799999999999999999999999999999998643211                                 111


Q ss_pred             eEEEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           92 YLKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      |+|+||+.| +|.+.+.. ..++++..+..++.||+.||.|||+.+++|+||+|.||++   +.++.++|+|||++....
T Consensus        91 ~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~---~~~~~~kL~dfg~~~~~~  166 (307)
T cd06607          91 WLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLVS  166 (307)
T ss_pred             EEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE---CCCCCEEEeecCcceecC
Confidence            899999975 77777653 4679999999999999999999999999999999999999   567789999999987654


Q ss_pred             CCceecccccCCcccCccccC---CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          171 EGKVYEEVVGTPLYMAPELLG---PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       171 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      ..   ....+++.|+|||++.   ...++.++||||+|+++|+|++|..||.+.........+......  ......++.
T Consensus       167 ~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  241 (307)
T cd06607         167 PA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSP--TLSSNDWSD  241 (307)
T ss_pred             CC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCC--CCCchhhCH
Confidence            33   2456788999999874   345788999999999999999999999887766655555433221  111234678


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .++++|.+||..+|.+|||+.+++.||||.
T Consensus       242 ~~~~li~~~l~~~p~~Rp~~~~il~~~~~~  271 (307)
T cd06607         242 YFRNFVDSCLQKIPQDRPSSEELLKHRFVL  271 (307)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence            899999999999999999999999999998

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=1.6e-34  Score=284.28  Aligned_cols=225  Identities=25%  Similarity=0.412  Sum_probs=179.9

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------------   89 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------------   89 (483)
                      .++|.+.+.||.|++|.||+|.++.+++.+|+|.+......+                                      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            578999999999999999999999999999999985432111                                      


Q ss_pred             --cCeEEEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           90 --EGYLKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        90 --~~~lv~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                        ..|+|+||+.+ +|...+.. ...+++..+..++.||++||.|||++|++|+||+|+||++   +.++.++|+|||++
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~  162 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFGLA  162 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcCccc
Confidence              11889999976 67777654 4579999999999999999999999999999999999999   67789999999998


Q ss_pred             eeccCCce------------ecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcc
Q 048594          167 FFFEEGKV------------YEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR  233 (483)
Q Consensus       167 ~~~~~~~~------------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~  233 (483)
                      ........            .....+++.|+|||.+.+. .++.++|+||+||++|+|++|.+||.+.+.......+...
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~  242 (311)
T cd07866         163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKL  242 (311)
T ss_pred             hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            76543211            1123567889999987653 4788999999999999999999999887766555544321


Q ss_pred             ccCCCC--------------------------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          234 EIDFKS--------------------------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       234 ~~~~~~--------------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ......                          ..+..+++.+.+||.+||..+|.+|||+.+++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         243 CGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             hCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            110000                          0123455788999999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=7.7e-35  Score=294.48  Aligned_cols=221  Identities=21%  Similarity=0.336  Sum_probs=174.6

Q ss_pred             ccceEEeeeecccCceeEEEEEE-----CCCCCEEEEEEeccCCCC--------------------------------Cc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTE-----NSTGLQFACKSISKTSKS--------------------------------DE   90 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~~avK~~~~~~~~--------------------------------~~   90 (483)
                      .++|++.+.||+|+||.||+|.+     ..++..||+|++......                                ..
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            34799999999999999999974     346778999998653211                                01


Q ss_pred             CeEEEeccCCCChHHHHhcCC-----------------------------------------------------------
Q 048594           91 GYLKREHCDGGTLVDRISDRE-----------------------------------------------------------  111 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~-----------------------------------------------------------  111 (483)
                      .|+|||||+||+|.+++....                                                           
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            189999999999999986431                                                           


Q ss_pred             ----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594          112 ----------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus       112 ----------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                                      .+++..+..++.||+.||.|||+++|+||||||+|||+   +....+||+|||++.........
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~~~~~~~~  270 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIRNDSNY  270 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEE---ECCCcEEEecCccceeccCcccc
Confidence                            47888999999999999999999999999999999999   45678999999999866433211


Q ss_pred             ---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          176 ---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       176 ---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                         ....++..|+|||.+.+..++.++|||||||++|+|++ |..||....................  .....+.++++
T Consensus       271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~  348 (375)
T cd05104         271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRML--SPECAPSEMYD  348 (375)
T ss_pred             cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCC--CCCCCCHHHHH
Confidence               11234567999999988889999999999999999998 8999977654433333333222221  12346789999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcC
Q 048594          252 LIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      +|.+||+.||++|||+.++++.
T Consensus       349 li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         349 IMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             HHHHHccCChhHCcCHHHHHHH
Confidence            9999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-34  Score=274.31  Aligned_cols=221  Identities=29%  Similarity=0.474  Sum_probs=188.0

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E~   97 (483)
                      +|.+.+.||+|++|.||++.++.+++.||+|.+.......                                ..|+++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            5889999999999999999999999999999997764310                                01899999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-ec
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-YE  176 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-~~  176 (483)
                      +.+++|.+++....++++..+..++.|++.+|.+||++|++|+||+|+||++   +..+.++|+|||.+........ ..
T Consensus        81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~~~  157 (254)
T cd06627          81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT---TKDGVVKLADFGVATKLNDVSKDDA  157 (254)
T ss_pred             CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---CCCCCEEEeccccceecCCCccccc
Confidence            9999999999888899999999999999999999999999999999999999   5577899999999987654332 23


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHh
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM  256 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  256 (483)
                      ...++..|+|||.+.+..++.++|+||+|+++++|++|..||...........+.....   ....+.++..+.+++.+|
T Consensus       158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~  234 (254)
T cd06627         158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH---PPLPEGISPELKDFLMQC  234 (254)
T ss_pred             ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC---CCCCCCCCHHHHHHHHHH
Confidence            45678899999999877788999999999999999999999987665444444432221   112246789999999999


Q ss_pred             CccCCCCCCCHHHHHcCCcC
Q 048594          257 LIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       257 L~~dP~~R~t~~e~L~h~~~  276 (483)
                      |..+|++|||+.+++.||||
T Consensus       235 l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         235 FQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             HhCChhhCcCHHHHhcCCCC
Confidence            99999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-34  Score=280.98  Aligned_cols=222  Identities=36%  Similarity=0.509  Sum_probs=182.7

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------CeEEEecc
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GYLKREHC   98 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~lv~E~~   98 (483)
                      |.+.+.||+|++|.||+|.++.+|+.+|+|.+........                                .|+|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            6788999999999999999999999999999876542211                                18999999


Q ss_pred             CCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-eec
Q 048594           99 DGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYE  176 (483)
Q Consensus        99 ~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~~  176 (483)
                      .+ +|.+++... ..+++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||.+....... ...
T Consensus        81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~df~~~~~~~~~~~~~~  156 (283)
T cd05118          81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVRPYT  156 (283)
T ss_pred             CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEE---CCCCcEEEeeeeeeEecCCCccccc
Confidence            86 888888663 689999999999999999999999999999999999999   567889999999998765443 233


Q ss_pred             ccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-------------------
Q 048594          177 EVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-------------------  236 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-------------------  236 (483)
                      ...++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||.+.+..+....+......                   
T Consensus       157 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd05118         157 HYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFS  236 (283)
T ss_pred             CccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhh
Confidence            45678889999998766 6789999999999999999999999887766555444321110                   


Q ss_pred             CC-------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 FK-------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 ~~-------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ++       ...++.++.++++||.+||.+||.+||++.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             hccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            00       01123567899999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=3.6e-35  Score=285.96  Aligned_cols=224  Identities=25%  Similarity=0.396  Sum_probs=176.7

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------CcCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------DEGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------~~~~lv~E~   97 (483)
                      +|...+.||+|+||.||++.++.+|+.+|+|.+......                                ...++++||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            566788999999999999999999999999998754211                                011889999


Q ss_pred             cCCCChHHHH---h--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           98 CDGGTLVDRI---S--DRERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        98 ~~g~~L~~~l---~--~~~~l~~~~~~~i~~qil~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +.+ ++.++.   .  ....+++..+..++.|++.||+|||+. +++||||||+||++   +..+.++|+|||++..+..
T Consensus        85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~  160 (288)
T cd06616          85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL---DRNGNIKLCDFGISGQLVD  160 (288)
T ss_pred             ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEE---ccCCcEEEeecchhHHhcc
Confidence            875 554432   2  236799999999999999999999975 99999999999999   5667899999999876554


Q ss_pred             CceecccccCCcccCccccCCC---CCCCcCchHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHHccc-cCCCCCCCCCCC
Q 048594          172 GKVYEEVVGTPLYMAPELLGPC---KYGKEIDIWSAGLILYNLLSGAQPFWAESL-YGTLTAIMSRE-IDFKSDPWPTIS  246 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~~ll~g~~pf~~~~~-~~~~~~i~~~~-~~~~~~~~~~~~  246 (483)
                      ........|++.|+|||.+.+.   .++.++|+||+||++|+|++|.+||..... ......+.... ..........++
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd06616         161 SIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFS  240 (288)
T ss_pred             CCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccC
Confidence            4333445688999999998765   578999999999999999999999966442 12222222221 122222224588


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .++.+||.+||+++|.+|||+.+++.||||+
T Consensus       241 ~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~  271 (288)
T cd06616         241 PSFVNFINLCLIKDESKRPKYKELLEHPFIK  271 (288)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence            9999999999999999999999999999997

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=6.1e-35  Score=295.05  Aligned_cols=219  Identities=20%  Similarity=0.312  Sum_probs=174.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCC-----CEEEEEEeccCCCC--------------------------------CcC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTG-----LQFACKSISKTSKS--------------------------------DEG   91 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~--------------------------------~~~   91 (483)
                      ++|.+.+.||+|+||.||+|++..+|     ..||+|.+......                                ...
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~  117 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV  117 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence            57999999999999999999975444     57999998754211                                011


Q ss_pred             eEEEeccCCCChHHHHhcC-------------------------------------------------------------
Q 048594           92 YLKREHCDGGTLVDRISDR-------------------------------------------------------------  110 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~-------------------------------------------------------------  110 (483)
                      |+|||||.+|+|.+++...                                                             
T Consensus       118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (374)
T cd05106         118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS  197 (374)
T ss_pred             EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence            8999999999999988542                                                             


Q ss_pred             ---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee---ccc
Q 048594          111 ---------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY---EEV  178 (483)
Q Consensus       111 ---------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~---~~~  178 (483)
                               .++++..+..++.||+.||.|||++||+||||||+||++   +..+.++|+|||++.........   ...
T Consensus       198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~---~~~~~~kL~DfGla~~~~~~~~~~~~~~~  274 (374)
T cd05106         198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLL---TDGRVAKICDFGLARDIMNDSNYVVKGNA  274 (374)
T ss_pred             cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEE---eCCCeEEEeeceeeeeccCCcceeeccCC
Confidence                     247888999999999999999999999999999999999   56678999999998765433211   122


Q ss_pred             ccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhC
Q 048594          179 VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML  257 (483)
Q Consensus       179 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  257 (483)
                      .+++.|+|||++.+..++.++||||+||++|+|++ |..||...........+........  ....+++++.++|.+||
T Consensus       275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl  352 (374)
T cd05106         275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMS--RPDFAPPEIYSIMKMCW  352 (374)
T ss_pred             CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCcc--CCCCCCHHHHHHHHHHc
Confidence            34567999999988889999999999999999997 9999977654444444433332222  12346899999999999


Q ss_pred             ccCCCCCCCHHHHHc
Q 048594          258 IRDPNNQITVAQILK  272 (483)
Q Consensus       258 ~~dP~~R~t~~e~L~  272 (483)
                      +.||.+|||+.++++
T Consensus       353 ~~dp~~RPs~~~l~~  367 (374)
T cd05106         353 NLEPTERPTFSQISQ  367 (374)
T ss_pred             CCChhhCcCHHHHHH
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.2e-34  Score=282.03  Aligned_cols=209  Identities=17%  Similarity=0.218  Sum_probs=177.9

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------------cCeEEEec
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------------EGYLKREH   97 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------------~~~lv~E~   97 (483)
                      ..||+|++|.||+|..  +|+.||||++.......                                     ..++||||
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey  103 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY  103 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence            5699999999999988  58999999997643211                                     12799999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE  176 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~  176 (483)
                      |+||+|.+++.+...+++..+..++.|++.||.|||+. +++||||||+||++   +.++.+||+|||++..+....  .
T Consensus       104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill---~~~~~~kl~dfg~~~~~~~~~--~  178 (283)
T PHA02988        104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV---TENYKLKIICHGLEKILSSPP--F  178 (283)
T ss_pred             CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE---CCCCcEEEcccchHhhhcccc--c
Confidence            99999999999888899999999999999999999984 89999999999999   567899999999987654322  2


Q ss_pred             ccccCCcccCccccCC--CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          177 EVVGTPLYMAPELLGP--CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ...|++.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+....+......++.+  ...++++++||.
T Consensus       179 ~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~l~~li~  256 (283)
T PHA02988        179 KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP--LDCPLEIKCIVE  256 (283)
T ss_pred             cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--CcCcHHHHHHHH
Confidence            4568899999999975  578999999999999999999999999888777777776544433221  257899999999


Q ss_pred             HhCccCCCCCCCHHHHHc
Q 048594          255 RMLIRDPNNQITVAQILK  272 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~  272 (483)
                      +||+.||.+|||+.++++
T Consensus       257 ~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        257 ACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             HHhcCCcccCcCHHHHHH
Confidence            999999999999999985

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.6e-34  Score=280.10  Aligned_cols=218  Identities=17%  Similarity=0.244  Sum_probs=178.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCC----EEEEEEeccCCCC------------------------------CcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGL----QFACKSISKTSKS------------------------------DEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~~avK~~~~~~~~------------------------------~~~~lv   94 (483)
                      ++|.+.+.||+|+||+||+|.+..+|.    .||+|++......                              ...+++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~   86 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLV   86 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEE
Confidence            579999999999999999999887776    4899998654311                              111799


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      +||+++|+|.+++... +.+++..+..++.||+.||.|||+++++||||||+||++   ...+.+||+|||++.......
T Consensus        87 ~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~---~~~~~~kL~dfG~~~~~~~~~  163 (279)
T cd05109          87 TQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLV---KSPNHVKITDFGLARLLDIDE  163 (279)
T ss_pred             EEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE---cCCCcEEECCCCceeeccccc
Confidence            9999999999999764 569999999999999999999999999999999999999   556789999999998764322


Q ss_pred             ee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          174 VY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       174 ~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      ..   ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||...........+......   +..+..+.++
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  240 (279)
T cd05109         164 TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERL---PQPPICTIDV  240 (279)
T ss_pred             ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC---CCCccCCHHH
Confidence            21   12234667999999988889999999999999999998 99999776665555555443221   2234678999


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHc
Q 048594          250 KDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .++|.+||..||.+||++.++++
T Consensus       241 ~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         241 YMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999985

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-35  Score=291.18  Aligned_cols=215  Identities=24%  Similarity=0.365  Sum_probs=182.6

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------cCeEEEeccC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------EGYLKREHCD   99 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~lv~E~~~   99 (483)
                      +.+.+++.||+|.||.|+.|..+.+ ..+|+|.+.......                             ..||||||++
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~  284 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP  284 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence            4566688899999999999999833 479999998754221                             2299999999


Q ss_pred             CCChHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecc
Q 048594          100 GGTLVDRISD--RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE  177 (483)
Q Consensus       100 g~~L~~~l~~--~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~  177 (483)
                      .|+|.++|..  .+.+.......++.||++|++||+++++|||||-+.|||+   +++..+||+|||+|+...+.. +..
T Consensus       285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~~~vKIsDFGLAr~~~d~~-Y~~  360 (468)
T KOG0197|consen  285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DEDLVVKISDFGLARLIGDDE-YTA  360 (468)
T ss_pred             cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccCceEEEcccccccccCCCc-eee
Confidence            9999999987  4679999999999999999999999999999999999999   777899999999999554433 222


Q ss_pred             ccc---CCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          178 VVG---TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       178 ~~g---t~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ..|   ..-|.|||.+....++.++||||+||+|+|++| |+.||.+.+..+.+..+.++.- ++.  ++..|+++-+++
T Consensus       361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyR-lp~--P~~CP~~vY~lM  437 (468)
T KOG0197|consen  361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYR-LPR--PEGCPDEVYELM  437 (468)
T ss_pred             cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCc-CCC--CCCCCHHHHHHH
Confidence            222   335999999999999999999999999999998 9999999999999999887743 332  357899999999


Q ss_pred             HHhCccCCCCCCCHHHHH
Q 048594          254 RRMLIRDPNNQITVAQIL  271 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L  271 (483)
                      ..||..+|++|||.+.+.
T Consensus       438 ~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  438 KSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             HHHhhCCcccCCCHHHHH
Confidence            999999999999998654

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=6.7e-35  Score=283.68  Aligned_cols=223  Identities=25%  Similarity=0.348  Sum_probs=184.0

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E~   97 (483)
                      ++|++++.||+|++|+||++.+..+|+.+|+|++.......                               ..|+|+||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            57999999999999999999999999999999886543211                               11999999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE  176 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~  176 (483)
                      +++++|.+++...+++++..+..++.+++.+|.|||+ .+++|+||+|+||++   +.++.++|+|||++....... ..
T Consensus        85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~d~gl~~~~~~~~-~~  160 (284)
T cd06620          85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV---NSRGQIKLCDFGVSGELINSI-AD  160 (284)
T ss_pred             CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE---CCCCcEEEccCCcccchhhhc-cC
Confidence            9999999999888889999999999999999999997 689999999999999   567789999999887543222 23


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH-----------HHHHHHHccccCCCCCCCCCC
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY-----------GTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~-----------~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      ...|+..|+|||.+.+..++.++|+||+||++|++++|..||......           .....+.....  +..+...+
T Consensus       161 ~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  238 (284)
T cd06620         161 TFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP--PRLPSSDF  238 (284)
T ss_pred             ccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC--CCCCchhc
Confidence            457899999999998878899999999999999999999999765431           22222222211  11111237


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +.++.+||.+||+.||.+|||+.|+++|+||.
T Consensus       239 ~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~  270 (284)
T cd06620         239 PEDLRDFVDACLLKDPTERPTPQQLCAMPPFI  270 (284)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence            78999999999999999999999999999996

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=3.3e-34  Score=273.45  Aligned_cols=222  Identities=32%  Similarity=0.500  Sum_probs=186.8

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeEEE
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYLKR   95 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~lv~   95 (483)
                      +|.+.+.||+|++|.||+|.++.++..+++|++......                                  ...|+|+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            488999999999999999999999999999998765420                                  1228999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      ||+.+++|.+++.+...+++..+..++.|++.+|.|||+.+++|+||+|+||++   ..++.++|+|||.+........ 
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~  157 (260)
T cd06606          81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILV---DSDGVVKLADFGCAKRLGDIETG  157 (260)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEcccccEEeccccccc
Confidence            999999999999888899999999999999999999999999999999999999   5678999999999987765432 


Q ss_pred             --ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC-hHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          175 --YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES-LYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       175 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                        .....++..|+|||.+....++.++|+||+|+++++|++|..||.... .......+.....  ........+..+.+
T Consensus       158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~  235 (260)
T cd06606         158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGE--PPEIPEHLSEEAKD  235 (260)
T ss_pred             ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCC--CcCCCcccCHHHHH
Confidence              344578889999999988788999999999999999999999997765 2223333322111  11122356899999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ||.+||..+|.+||++.+++.||||
T Consensus       236 ~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         236 FLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             HHHHhCcCChhhCCCHHHHhhCCCC
Confidence            9999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.7e-34  Score=288.65  Aligned_cols=228  Identities=28%  Similarity=0.455  Sum_probs=183.8

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------   89 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------   89 (483)
                      ....+..+|.+.+.||+|++|.||+|.++.+|+.+|+|.+.+.....                                 
T Consensus         9 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~   88 (342)
T cd07879           9 TVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVS   88 (342)
T ss_pred             hhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheeccccc
Confidence            34566789999999999999999999999999999999986532110                                 


Q ss_pred             -----cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           90 -----EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        90 -----~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                           ..|+|+||+.+ +|..++  ...+++..+..++.||+.||+|||+++++||||+|+||++   +.++.++|+|||
T Consensus        89 ~~~~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll---~~~~~~kL~dfg  162 (342)
T cd07879          89 GDEFQDFYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV---NEDCELKILDFG  162 (342)
T ss_pred             CCCCceEEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCC
Confidence                 11799999865 676665  3468999999999999999999999999999999999999   567899999999


Q ss_pred             cceeccCCceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc---------
Q 048594          165 LAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE---------  234 (483)
Q Consensus       165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~---------  234 (483)
                      ++......  .....+++.|+|||.+.+ ..++.++|+||+||++|+|++|+.||.+.+....+..+....         
T Consensus       163 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  240 (342)
T cd07879         163 LARHADAE--MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ  240 (342)
T ss_pred             CCcCCCCC--CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence            98764322  234567889999999865 457889999999999999999999998877555554443211         


Q ss_pred             --------------cCCCCC----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          235 --------------IDFKSD----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       235 --------------~~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                    ...+..    .++..++.+.+||.+||+.||.+|||+++++.||||..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~  302 (342)
T cd07879         241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDS  302 (342)
T ss_pred             HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhh
Confidence                          001111    12457788999999999999999999999999999983

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=2.1e-34  Score=277.21  Aligned_cols=219  Identities=26%  Similarity=0.445  Sum_probs=178.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~   95 (483)
                      .+|.+.+.||+|+||.||+|+++.++..+|||.+......                                 ...|+|+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            4799999999999999999999999999999987542210                                 1119999


Q ss_pred             eccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           96 EHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        96 E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      ||+++++|.+++..    ...+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~---~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEE---cCCCCEEECccccceeccc
Confidence            99999999988853    3458999999999999999999999999999999999999   5677899999999887643


Q ss_pred             Cce-ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh--HHHHHHHHccccCCCCCCCCCCCHH
Q 048594          172 GKV-YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL--YGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       172 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      ... .....|++.|+|||.+.+..++.++|+||+|+++|+|++|..||.....  ......+....  .+..+....+..
T Consensus       159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  236 (267)
T cd08228         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD--YPPLPTEHYSEK  236 (267)
T ss_pred             hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC--CCCCChhhcCHH
Confidence            221 2235688899999999887889999999999999999999999966432  23334333222  222223357789


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHc
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.++|.+||..+|++|||+.++++
T Consensus       237 ~~~li~~cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         237 LRELVSMCIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             HHHHHHHHCCCCcccCcCHHHHHH
Confidence            999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=1.2e-34  Score=281.00  Aligned_cols=218  Identities=21%  Similarity=0.299  Sum_probs=182.2

Q ss_pred             cceEEeeeecccCceeEEEEEECC-----CCCEEEEEEeccCCCC-------------------------------CcCe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENS-----TGLQFACKSISKTSKS-------------------------------DEGY   92 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~~-------------------------------~~~~   92 (483)
                      ++|.+.+.||+|+||.||+|.+..     ++..+|+|.+......                               ...|
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            468899999999999999998753     4688999998764322                               0119


Q ss_pred             EEEeccCCCChHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           93 LKREHCDGGTLVDRISDR--------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~--------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                      +||||++|++|.+++...              ..+++..+..++.||+.||.|||+++++||||||+||++   +.++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV---GYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE---cCCCeE
Confidence            999999999999999754              347889999999999999999999999999999999999   567899


Q ss_pred             EEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccc
Q 048594          159 KATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSRE  234 (483)
Q Consensus       159 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~  234 (483)
                      +|+|||.+........   .....+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+.........+..+.
T Consensus       162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~  241 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR  241 (280)
T ss_pred             EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence            9999999876432211   122345678999999988889999999999999999998 999998888888777777654


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          235 IDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       235 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ....   ...++..+.+++.+||..||.+|||+.|+++
T Consensus       242 ~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         242 LLQR---PRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             cCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            4332   2467899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-34  Score=278.45  Aligned_cols=222  Identities=32%  Similarity=0.518  Sum_probs=182.8

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEecc
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKREHC   98 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E~~   98 (483)
                      |++.+.||+|++|.||+|++..+++.+|+|.+.......                                ..|+|+||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            677889999999999999999999999999998753111                                119999999


Q ss_pred             CCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-eec
Q 048594           99 DGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYE  176 (483)
Q Consensus        99 ~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~~  176 (483)
                      .+ +|.+++.+. ..+++..+..++.|++.||.|||+++++|+||+|+||++   +.++.++|+|||.+....... ...
T Consensus        81 ~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~---~~~~~~~l~d~g~~~~~~~~~~~~~  156 (282)
T cd07829          81 DM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI---NRDGVLKLADFGLARAFGIPLRTYT  156 (282)
T ss_pred             Cc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE---cCCCCEEEecCCcccccCCCccccC
Confidence            85 899999876 589999999999999999999999999999999999999   567899999999987664332 223


Q ss_pred             ccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc------------------cCC
Q 048594          177 EVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE------------------IDF  237 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~------------------~~~  237 (483)
                      ...++..|+|||.+.+. .++.++|+||+|++++++++|.+||.+......+..+....                  ..+
T Consensus       157 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
T cd07829         157 HEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTF  236 (282)
T ss_pred             ccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccc
Confidence            34567789999998765 67899999999999999999999998876655544443210                  000


Q ss_pred             C-------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          238 K-------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       238 ~-------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      +       ...++.++..+.++|.+||..+|++||++.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         237 PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             cccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            0       01234567899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=8e-35  Score=290.17  Aligned_cols=220  Identities=20%  Similarity=0.292  Sum_probs=174.7

Q ss_pred             cceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCCC---------------------------------Cc
Q 048594           49 LHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSKS---------------------------------DE   90 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~---------------------------------~~   90 (483)
                      ++|++.+.||+|+||.||+|.+.     .+++.||+|++......                                 ..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            58999999999999999999743     34588999998643210                                 01


Q ss_pred             CeEEEeccCCCChHHHHhcC------------------------------------------------------------
Q 048594           91 GYLKREHCDGGTLVDRISDR------------------------------------------------------------  110 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~------------------------------------------------------------  110 (483)
                      .|+++||+++++|.+++...                                                            
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence            17899999999999998542                                                            


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce---ecccccCCcccC
Q 048594          111 -ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMA  186 (483)
Q Consensus       111 -~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~a  186 (483)
                       .++++..+..++.||+.||.|||+++|+||||||+||++   +..+.++|+|||++..+.....   .....++..|+|
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill---~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  243 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA  243 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE---eCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence             267899999999999999999999999999999999999   4567899999999987543221   122345678999


Q ss_pred             ccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCC
Q 048594          187 PELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI  265 (483)
Q Consensus       187 PE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  265 (483)
                      ||++.+..++.++||||+||++|+|++ |..||.+....+.+............  ....++++.+++.+||+.+|.+||
T Consensus       244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~RP  321 (337)
T cd05054         244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRA--PEYATPEIYSIMLDCWHNNPEDRP  321 (337)
T ss_pred             cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCC--CccCCHHHHHHHHHHccCChhhCc
Confidence            999988889999999999999999998 99999775443333333322222111  235678999999999999999999


Q ss_pred             CHHHHHcC
Q 048594          266 TVAQILKH  273 (483)
Q Consensus       266 t~~e~L~h  273 (483)
                      ++.++++|
T Consensus       322 s~~ell~~  329 (337)
T cd05054         322 TFSELVEI  329 (337)
T ss_pred             CHHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=4.3e-34  Score=277.45  Aligned_cols=222  Identities=33%  Similarity=0.498  Sum_probs=181.6

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-------------------C-------------CcCeEEEecc
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-------------------S-------------DEGYLKREHC   98 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------------------~-------------~~~~lv~E~~   98 (483)
                      |.+.+.||+|++|+||+|+...+++.+|+|.+.....                   .             ...|+||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            6789999999999999999999999999999865421                   0             1119999999


Q ss_pred             CCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec
Q 048594           99 DGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE  176 (483)
Q Consensus        99 ~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~  176 (483)
                       +++|.+++....  .+++..+..++.||+.+|.|||+++++|+||+|+||++   +.++.++|+|||.+..........
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i---~~~~~~~l~d~~~~~~~~~~~~~~  156 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV---SGPEVVKIADFGLAREIRSRPPYT  156 (283)
T ss_pred             -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCCEEEeecccceeccCCCCcC
Confidence             679999887764  78999999999999999999999999999999999999   667899999999998765544444


Q ss_pred             ccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-------------------
Q 048594          177 EVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-------------------  236 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-------------------  236 (483)
                      ...++..|+|||.+.. ..++.++|+||+|+++++|++|.+||...........+....-.                   
T Consensus       157 ~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd07830         157 DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR  236 (283)
T ss_pred             CCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccc
Confidence            5678889999998744 45688999999999999999999999877655554433221000                   


Q ss_pred             CC-------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 FK-------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 ~~-------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .+       ....+..+..+.+||.+||+.+|.+|||+.|++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             ccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            00       00112346889999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=3.4e-34  Score=275.41  Aligned_cols=219  Identities=20%  Similarity=0.308  Sum_probs=182.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEecc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKREHC   98 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E~~   98 (483)
                      ..+|.+.+.||+|++|.||+|.++.++..+|+|.+......                             ...|+|+||+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            35699999999999999999999999999999998754311                             1118999999


Q ss_pred             CCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec
Q 048594           99 DGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE  176 (483)
Q Consensus        99 ~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~  176 (483)
                      ++++|.+++...  ..+++..+..++.|++.||.|||+++++|+||||+||++   +.++.+||+|||.+..........
T Consensus        85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~df~~~~~~~~~~~~~  161 (263)
T cd05052          85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDTYTA  161 (263)
T ss_pred             CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCcEEeCCCccccccccceeec
Confidence            999999999754  358999999999999999999999999999999999999   567889999999988765432211


Q ss_pred             --ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          177 --EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       177 --~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                        ...+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+.........+.....   ......++.++.++|
T Consensus       162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li  238 (263)
T cd05052         162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYR---MERPEGCPPKVYELM  238 (263)
T ss_pred             cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC---CCCCCCCCHHHHHHH
Confidence              1223567999999988889999999999999999998 9999988777666666654321   122346789999999


Q ss_pred             HHhCccCCCCCCCHHHHHc
Q 048594          254 RRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+||..+|++|||+.++++
T Consensus       239 ~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         239 RACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             HHHccCCcccCCCHHHHHH
Confidence            9999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=3e-34  Score=278.77  Aligned_cols=222  Identities=30%  Similarity=0.480  Sum_probs=182.3

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------------------C--CcCeEEEe
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------------------S--DEGYLKRE   96 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------------------~--~~~~lv~E   96 (483)
                      |.+.+.||+|++|.||+|.++.+|..+|+|.+.....                                .  ...|+|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            7789999999999999999999999999999986520                                0  12389999


Q ss_pred             ccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--
Q 048594           97 HCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--  173 (483)
Q Consensus        97 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--  173 (483)
                      |+.+ +|.+++... ..+++..+..++.||+.||+|||+.+++|+||+|+||++   +.++.++|+|||.+.......  
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~---~~~~~~~l~d~g~~~~~~~~~~~  156 (287)
T cd07840          81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLARPYTKRNSA  156 (287)
T ss_pred             cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---cCCCCEEEccccceeeccCCCcc
Confidence            9976 899888765 679999999999999999999999999999999999999   667899999999998765432  


Q ss_pred             eecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCC-----------
Q 048594          174 VYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP-----------  241 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-----------  241 (483)
                      ......++..|+|||.+.+ ..++.++|+||+|+++|+|++|..||...+.......+...........           
T Consensus       157 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd07840         157 DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFE  236 (287)
T ss_pred             cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhh
Confidence            2234466888999997754 3578999999999999999999999988776665555543211111111           


Q ss_pred             ---------------CCC-CCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          242 ---------------WPT-ISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       242 ---------------~~~-~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                                     +.. .++.+.++|.+||..+|.+|||+.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         237 NLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             hccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence                           112 27889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=2.2e-34  Score=280.77  Aligned_cols=222  Identities=32%  Similarity=0.524  Sum_probs=181.0

Q ss_pred             ceEEeeeecccCceeEEEEEEC---CCCCEEEEEEeccCCCC-----------------------------------CcC
Q 048594           50 HFTIAEELCRGESGRIYLCTEN---STGLQFACKSISKTSKS-----------------------------------DEG   91 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~-----------------------------------~~~   91 (483)
                      .|++.+.||.|+||.||+|.+.   .+|..||+|++......                                   ...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            3889999999999999999875   47899999998653210                                   001


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+|+||+++++|.+++....++++..+..++.||+.||.|||+.+++||||+|+||++   +..+.++|+|||.+.....
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~  157 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFHE  157 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---CCCCCEEEeeCccceeccc
Confidence            8999999999999999888889999999999999999999999999999999999999   5678999999999876543


Q ss_pred             Cc--eecccccCCcccCccccCCC--CCCCcCchHHHHHHHHHHhhCCCCCCCCCh----HHHHHHHHccccCCCCCCCC
Q 048594          172 GK--VYEEVVGTPLYMAPELLGPC--KYGKEIDIWSAGLILYNLLSGAQPFWAESL----YGTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       172 ~~--~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~~ll~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~  243 (483)
                      ..  ......|+..|+|||.+...  .++.++|+||+|+++|+|++|..||.....    ......+......    ..+
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~  233 (290)
T cd05613         158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP----YPQ  233 (290)
T ss_pred             ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCC----CCc
Confidence            22  12235688999999998653  467899999999999999999999965432    2233333332222    224


Q ss_pred             CCCHHHHHHHHHhCccCCCCCC-----CHHHHHcCCcCCC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      .+++.+.+++.+||..+|.+||     ++.+++.||||..
T Consensus       234 ~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~  273 (290)
T cd05613         234 EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK  273 (290)
T ss_pred             cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCccccc
Confidence            5789999999999999999997     8999999999983

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=2.3e-34  Score=282.70  Aligned_cols=222  Identities=22%  Similarity=0.268  Sum_probs=174.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECC----------------CCCEEEEEEeccCCCC-----------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENS----------------TGLQFACKSISKTSKS-----------------------   88 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~~avK~~~~~~~~-----------------------   88 (483)
                      .++|.+.+.||+|+||.||+|.++.                ++..||+|++......                       
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            4689999999999999999998642                3457999998764211                       


Q ss_pred             --------CcCeEEEeccCCCChHHHHhcC-------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeC
Q 048594           89 --------DEGYLKREHCDGGTLVDRISDR-------------------ERYTERAAASVFRSVVNALHACHSNGIMHRD  141 (483)
Q Consensus        89 --------~~~~lv~E~~~g~~L~~~l~~~-------------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~d  141 (483)
                              ...|+|||||.+++|.+++...                   ..+++..+..++.||+.||.|||+.||+|||
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~d  163 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRD  163 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence                    1128999999999999998653                   2367788999999999999999999999999


Q ss_pred             CCCCeEEEeeCCCCCcEEEeecccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh--CCC
Q 048594          142 LKPENFIFTTDDENATLKATDFGLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS--GAQ  216 (483)
Q Consensus       142 lkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~--g~~  216 (483)
                      |||+|||+   +.++.+||+|||.+..+......   ....++..|+|||++....++.++||||||+++|+|++  +..
T Consensus       164 lkp~Nill---~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~  240 (304)
T cd05096         164 LATRNCLV---GENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ  240 (304)
T ss_pred             cchhheEE---cCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence            99999999   56788999999999865433221   12345778999999988889999999999999999986  667


Q ss_pred             CCCCCChHHHHHHHHcc----ccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          217 PFWAESLYGTLTAIMSR----EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       217 pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ||...........+...    .........+..+..+.+++.+||..+|.+|||+.++.+
T Consensus       241 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         241 PYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             CCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            88776655555443321    111111122457889999999999999999999999943

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=3.6e-34  Score=280.31  Aligned_cols=227  Identities=25%  Similarity=0.412  Sum_probs=182.4

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYL   93 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~l   93 (483)
                      .-.+.|.+.+.||+|++|.||+|.++.+++.+|||.+.......                                ..|+
T Consensus        12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~   91 (296)
T cd06618          12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI   91 (296)
T ss_pred             CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence            34567999999999999999999999999999999997543111                                1189


Q ss_pred             EEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           94 KREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      ++||+.+ +|.+.+.. ..++++..+..++.||+.||.|||+ .+++||||+|+||++   +.++.++|+|||.+..+..
T Consensus        92 v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill---~~~~~~kL~dfg~~~~~~~  167 (296)
T cd06618          92 CMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLVD  167 (296)
T ss_pred             EeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE---cCCCCEEECccccchhccC
Confidence            9999865 67776654 4579999999999999999999997 599999999999999   5678999999999876654


Q ss_pred             CceecccccCCcccCccccCCCC----CCCcCchHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHHccccCCCCCCCCCCC
Q 048594          172 GKVYEEVVGTPLYMAPELLGPCK----YGKEIDIWSAGLILYNLLSGAQPFWAESL-YGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslGvil~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ........+++.|+|||.+.+..    ++.++|+||+|+++|+|++|..||..... .+.+..+........ +....++
T Consensus       168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  246 (296)
T cd06618         168 SKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSL-PPNEGFS  246 (296)
T ss_pred             CCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCC-CCCCCCC
Confidence            33333446788999999987543    78899999999999999999999965332 344444444332111 1112478


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .++.+||.+||..+|.+|||+.+++.||||.
T Consensus       247 ~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~  277 (296)
T cd06618         247 PDFCSFVDLCLTKDHRKRPKYRELLQHPFIR  277 (296)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence            8999999999999999999999999999997

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.8e-34  Score=271.21  Aligned_cols=213  Identities=36%  Similarity=0.602  Sum_probs=183.2

Q ss_pred             ecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCeEEEeccCCCCh
Q 048594           57 LCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGYLKREHCDGGTL  103 (483)
Q Consensus        57 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~lv~E~~~g~~L  103 (483)
                      ||.|++|.||++.+..+++.+|+|++.+.....                                 ..|+||||+.+++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            699999999999999999999999987654221                                 11999999999999


Q ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ceecccccCC
Q 048594          104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVYEEVVGTP  182 (483)
Q Consensus       104 ~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~~~~~gt~  182 (483)
                      .+++.....+++..+..++.||+.||.|||+.+++|+||+|+||++   +..+.++|+|||.+...... .......++.
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  157 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL---DADGHIKLTDFGLAKELSSEGSRTNTFCGTP  157 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE---cCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence            9999988889999999999999999999999999999999999999   56778999999998776433 2233456788


Q ss_pred             cccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCC
Q 048594          183 LYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN  262 (483)
Q Consensus       183 ~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  262 (483)
                      .|+|||.+.+...+.++|+||||+++|++++|..||...........+......++    ...+..+.++|.+||..||.
T Consensus       158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~i~~~l~~~p~  233 (250)
T cd05123         158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP----EFLSPEARDLISGLLQKDPT  233 (250)
T ss_pred             cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhcCCHh
Confidence            99999999887788999999999999999999999987776666666655333322    34589999999999999999


Q ss_pred             CCCCH---HHHHcCCcC
Q 048594          263 NQITV---AQILKHPWL  276 (483)
Q Consensus       263 ~R~t~---~e~L~h~~~  276 (483)
                      +|||+   .+++.||||
T Consensus       234 ~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         234 KRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             hCCCcccHHHHHhCCCC
Confidence            99999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-36  Score=294.03  Aligned_cols=216  Identities=23%  Similarity=0.368  Sum_probs=186.7

Q ss_pred             eeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------cCeEEEeccCCCChHHHHhcC
Q 048594           54 AEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------EGYLKREHCDGGTLVDRISDR  110 (483)
Q Consensus        54 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------~~~lv~E~~~g~~L~~~l~~~  110 (483)
                      ++.||+|+.|.||+|+-+  ++.||||.+..-...+                       -.|||||||..|.|.+.|+..
T Consensus       129 LeWlGSGaQGAVF~Grl~--netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~  206 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRLH--NETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAG  206 (904)
T ss_pred             hhhhccCcccceeeeecc--CceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhcc
Confidence            778999999999999876  7899999886433111                       119999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccccCCcccCcccc
Q 048594          111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL  190 (483)
Q Consensus       111 ~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~  190 (483)
                      .+++......|.++|+.|+.|||.++|||||||.-|||+.   .+..|||+|||-++......+.-.++||..|||||++
T Consensus       207 ~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvI  283 (904)
T KOG4721|consen  207 RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVI  283 (904)
T ss_pred             CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHh
Confidence            9999999999999999999999999999999999999995   5558999999999887655555567999999999999


Q ss_pred             CCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHH
Q 048594          191 GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI  270 (483)
Q Consensus       191 ~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  270 (483)
                      ...+.+.|+||||+||+|||||||..||..-+....+..+-...+.++.+  ...|.-++-||+.||+-.|..||++.++
T Consensus       284 rnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvP--stcP~GfklL~Kqcw~sKpRNRPSFrqi  361 (904)
T KOG4721|consen  284 RNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVP--STCPDGFKLLLKQCWNSKPRNRPSFRQI  361 (904)
T ss_pred             hcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCc--ccCchHHHHHHHHHHhcCCCCCccHHHH
Confidence            99999999999999999999999999998766666655555555555443  4678889999999999999999999999


Q ss_pred             HcCCcC
Q 048594          271 LKHPWL  276 (483)
Q Consensus       271 L~h~~~  276 (483)
                      |.|-=+
T Consensus       362 l~HldI  367 (904)
T KOG4721|consen  362 LLHLDI  367 (904)
T ss_pred             HHHHhh
Confidence            998544

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=2.9e-34  Score=278.13  Aligned_cols=221  Identities=19%  Similarity=0.276  Sum_probs=179.4

Q ss_pred             cccceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCCC-------------------------------Cc
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSKS-------------------------------DE   90 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~-------------------------------~~   90 (483)
                      ..++|++.+.||+|++|.||+|.++     .++..+|+|.+......                               ..
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4578999999999999999999865     24578999998643210                               11


Q ss_pred             CeEEEeccCCCChHHHHhcCC----------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEE
Q 048594           91 GYLKREHCDGGTLVDRISDRE----------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA  160 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~----------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl  160 (483)
                      .++|+||+++++|.+++....          .+++..+..++.|++.||.|||+.+++|+||||+||++   +.++.++|
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~---~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEE---cCCCCEEE
Confidence            189999999999999987532          35778899999999999999999999999999999999   56788999


Q ss_pred             eecccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccC
Q 048594          161 TDFGLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREID  236 (483)
Q Consensus       161 ~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~  236 (483)
                      +|||++.........   ....+++.|+|||.+.+..++.++|+|||||++|+|++ |..||.+.........+......
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~  240 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLL  240 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC
Confidence            999998755332221   12345678999999988888999999999999999999 78999888777777766654432


Q ss_pred             CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          237 FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       237 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .   .....+..+.+++.+||+.+|++|||+.+++++
T Consensus       241 ~---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         241 D---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             C---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            1   124578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=1.8e-34  Score=273.20  Aligned_cols=204  Identities=27%  Similarity=0.410  Sum_probs=169.6

Q ss_pred             cCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------CcCeEEEeccCCCChHHHHhcCCCCC
Q 048594           60 GESGRIYLCTENSTGLQFACKSISKTSKS-------------------------DEGYLKREHCDGGTLVDRISDRERYT  114 (483)
Q Consensus        60 G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------~~~~lv~E~~~g~~L~~~l~~~~~l~  114 (483)
                      |.+|.||+|.++.+|+.||+|.+......                         +..|+||||+.|++|.+++....+++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~   83 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIP   83 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCC
Confidence            88999999999999999999999875311                         11299999999999999998877899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccccCCcccCccccCCCC
Q 048594          115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK  194 (483)
Q Consensus       115 ~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~  194 (483)
                      +..+..++.||+.||.|||+++++||||||+||++   +..+.++++|||.+......  .....++..|+|||.+....
T Consensus        84 ~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~df~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~  158 (237)
T cd05576          84 EECVKRWAAEMVVALDALHREGIVCRDLNPNNILL---DDRGHIQLTYFSRWSEVEDS--CDGEAVENMYCAPEVGGISE  158 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEecccchhccccc--cccCCcCccccCCcccCCCC
Confidence            99999999999999999999999999999999999   56778999999987665432  22345677899999998878


Q ss_pred             CCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCH-----HH
Q 048594          195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV-----AQ  269 (483)
Q Consensus       195 ~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~e  269 (483)
                      ++.++|+||+|+++|+|++|..|+......     +. ....+  ...+.+++.++++|.+||+.||.+|||+     ++
T Consensus       159 ~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~~-~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~  230 (237)
T cd05576         159 ETEACDWWSLGAILFELLTGKTLVECHPSG-----IN-THTTL--NIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVED  230 (237)
T ss_pred             CCchhhHHHHHHHHHHHHHCcchhhcCchh-----cc-ccccc--CCcccCCHHHHHHHHHHccCCHHHhcCCCccchHH
Confidence            899999999999999999999987543211     00 00111  1123578999999999999999999986     99


Q ss_pred             HHcCCcC
Q 048594          270 ILKHPWL  276 (483)
Q Consensus       270 ~L~h~~~  276 (483)
                      ++.||||
T Consensus       231 ~~~h~~~  237 (237)
T cd05576         231 IKSHPFF  237 (237)
T ss_pred             HHcCCCC
Confidence            9999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=2.3e-34  Score=277.01  Aligned_cols=219  Identities=27%  Similarity=0.467  Sum_probs=179.0

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~   95 (483)
                      .+|.+.+.||+|++|.||+|.++.+|..+|||.+......                                 ...|+++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4688999999999999999999999999999987653211                                 1119999


Q ss_pred             eccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           96 EHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        96 E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      ||+.|++|.+++..    ...+++..+..++.||+.||.|||++|++|+||+|+||++   +.++.++|+|||.+.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEECcchhhhcccc
Confidence            99999999998863    3568999999999999999999999999999999999999   5677899999999876543


Q ss_pred             Cc-eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh--HHHHHHHHccccCCCCCCCCCCCHH
Q 048594          172 GK-VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL--YGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       172 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      .. ......+++.|+|||.+.+..++.++|+||+|+++|+|++|..||.+...  ......+...  ..+..+....++.
T Consensus       159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  236 (267)
T cd08229         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC--DYPPLPSDHYSEE  236 (267)
T ss_pred             CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC--CCCCCCcccccHH
Confidence            22 22345788999999999888889999999999999999999999976543  2333333322  2222333467889


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHc
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ++++|.+||..+|.+|||+.++++
T Consensus       237 ~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         237 LRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HHHHHHHhcCCCcccCCCHHHHHH
Confidence            999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=4.2e-34  Score=284.51  Aligned_cols=224  Identities=31%  Similarity=0.471  Sum_probs=180.5

Q ss_pred             ceEEeeeecccCceeEEEEEECCC--CCEEEEEEeccCCCC-------------------------------------Cc
Q 048594           50 HFTIAEELCRGESGRIYLCTENST--GLQFACKSISKTSKS-------------------------------------DE   90 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~~avK~~~~~~~~-------------------------------------~~   90 (483)
                      +|.+.+.||+|+||.||+|.+..+  +..||+|.+......                                     ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            489999999999999999999988  999999987642100                                     01


Q ss_pred             CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           91 GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      .|+++||+. ++|.+++....++++..+..++.||+.||.|||++|++||||||+||++   +.++.++|+|||.+..+.
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili---~~~~~~kl~Dfg~a~~~~  156 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV---NADCELKICDFGLARGFS  156 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE---cCCCCEEeCcCCCceecc
Confidence            178888886 5899999888899999999999999999999999999999999999999   567789999999998654


Q ss_pred             CCce-----ecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc---------
Q 048594          171 EGKV-----YEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI---------  235 (483)
Q Consensus       171 ~~~~-----~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~---------  235 (483)
                      ....     .....|++.|+|||.+.+ ..++.++|+||+||++|+|++|.+||.+.+....+..+.....         
T Consensus       157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (332)
T cd07857         157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR  236 (332)
T ss_pred             cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            3221     223468999999998755 4578999999999999999999999987664443333221100         


Q ss_pred             --------------CCC----CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          236 --------------DFK----SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       236 --------------~~~----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                    ..+    ...++..+..+.+||.+||+.+|.+|||+.+++.|||++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~  296 (332)
T cd07857         237 IGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLA  296 (332)
T ss_pred             hhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhh
Confidence                          000    112345688999999999999999999999999999997

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=3.5e-34  Score=308.08  Aligned_cols=221  Identities=25%  Similarity=0.390  Sum_probs=176.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~lv~   95 (483)
                      ++|.+.+.||+|+||.||+|.+..+|+.||+|++.......                                 ..|+||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            57999999999999999999999999999999987532111                                 118999


Q ss_pred             eccCCCChHHHHhcC-----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           96 EHCDGGTLVDRISDR-----------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        96 E~~~g~~L~~~l~~~-----------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                      |||+|++|.+++...           ..++...+..++.||+.||+|||++||+||||||+||++   +..+.++|+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL---d~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL---GLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE---cCCCCEEEEecC
Confidence            999999999988642           235667788999999999999999999999999999999   667889999999


Q ss_pred             cceeccCC-------------------ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHH
Q 048594          165 LAFFFEEG-------------------KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG  225 (483)
Q Consensus       165 ~a~~~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~  225 (483)
                      ++......                   ......+||+.|+|||.+.+..++.++||||+||++|+|++|..||.......
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k  238 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK  238 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence            99765210                   00112468999999999998889999999999999999999999997755433


Q ss_pred             HHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          226 TLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       226 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ......... .....++..+|+.+.+++.+||..||++||+..+.+.+
T Consensus       239 i~~~~~i~~-P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~  285 (932)
T PRK13184        239 ISYRDVILS-PIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ  285 (932)
T ss_pred             hhhhhhccC-hhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            322211111 11112335688999999999999999999987766654

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=4.9e-34  Score=278.20  Aligned_cols=224  Identities=21%  Similarity=0.295  Sum_probs=180.7

Q ss_pred             ccceEEeeeecccCceeEEEEEECC-----CCCEEEEEEeccCCCC-------------------------------CcC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENS-----TGLQFACKSISKTSKS-------------------------------DEG   91 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~~-------------------------------~~~   91 (483)
                      .++|.+.+.||+|+||.||+|.++.     .+..+|+|.+......                               ...
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT   84 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            4689999999999999999997652     3558999987643211                               111


Q ss_pred             eEEEeccCCCChHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEe
Q 048594           92 YLKREHCDGGTLVDRISDR----------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKAT  161 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~----------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~  161 (483)
                      |+||||+.+|+|.+++...          ..++...+..++.||+.||.|||+++++||||||+||++   +.++.++|+
T Consensus        85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili---~~~~~~~L~  161 (288)
T cd05061          85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV---AHDFTVKIG  161 (288)
T ss_pred             EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEE---cCCCcEEEC
Confidence            9999999999999999652          234667889999999999999999999999999999999   567889999


Q ss_pred             ecccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCC
Q 048594          162 DFGLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDF  237 (483)
Q Consensus       162 Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~  237 (483)
                      |||+++........   ....++..|+|||.+.+..++.++|+||+||++|+|++ |..||.+....+....+..+....
T Consensus       162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~  241 (288)
T cd05061         162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD  241 (288)
T ss_pred             cCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            99998754332211   12244677999999988788999999999999999998 789998877777666665443221


Q ss_pred             CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc------CCcCC
Q 048594          238 KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK------HPWLN  277 (483)
Q Consensus       238 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~------h~~~~  277 (483)
                      .   ....++.+++++.+||+.+|++|||+.++++      ||||+
T Consensus       242 ~---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~  284 (288)
T cd05061         242 Q---PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP  284 (288)
T ss_pred             C---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCC
Confidence            1   1345789999999999999999999999987      89887

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=8.7e-34  Score=272.70  Aligned_cols=219  Identities=29%  Similarity=0.462  Sum_probs=179.2

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~lv~   95 (483)
                      ++|++.+.||.|++|.||+|.+..+|+.+|+|.+......+                                 ..++|+
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            57999999999999999999999999999999886432110                                 118999


Q ss_pred             eccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           96 EHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        96 E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      ||+++++|..++..    ...+++..+..++.+|+.||.|||+.|++|+||+|+||++   +.++.++|+|||.+.....
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~---~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI---TATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEE---CCCCcEEEeccceeeeccC
Confidence            99999999998864    3458999999999999999999999999999999999999   5677899999999876543


Q ss_pred             Cc-eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh--HHHHHHHHccccCCCCCCCCCCCHH
Q 048594          172 GK-VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL--YGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       172 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      .. ......+++.|+|||.+.+..++.++|+||+||++|+|++|..||.....  ......+..+..  +..+.+.++..
T Consensus       159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  236 (267)
T cd08224         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY--PPLPADHYSEE  236 (267)
T ss_pred             CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC--CCCChhhcCHH
Confidence            22 22335688899999999888899999999999999999999999965432  233333333222  22223367889


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHc
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.++|.+||..+|++|||+.++++
T Consensus       237 ~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         237 LRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHHHHHHcCCCcccCCCHHHHHH
Confidence            999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=2.6e-34  Score=280.79  Aligned_cols=225  Identities=30%  Similarity=0.564  Sum_probs=185.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEEec
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKREH   97 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~E~   97 (483)
                      ...|.....||+|++|.||++..+.+|..+|+|.+......                              +..|+||||
T Consensus        19 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   98 (292)
T cd06657          19 RTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF   98 (292)
T ss_pred             HHHhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence            34455567899999999999999999999999997543211                              111999999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-eec
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYE  176 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~~  176 (483)
                      +++++|.+++.. .++++..+..++.||+.+|+|||+.|++|+||+|.||++   +.++.++|+|||.+....... ...
T Consensus        99 ~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv---~~~~~~~l~dfg~~~~~~~~~~~~~  174 (292)
T cd06657          99 LEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRK  174 (292)
T ss_pred             CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEcccccceeccccccccc
Confidence            999999998754 478999999999999999999999999999999999999   567789999999887654321 123


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHh
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM  256 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  256 (483)
                      ...|++.|+|||.+.+..++.++|+||+|+++|+|++|..||.+.........+...... .......+++.+.+++.+|
T Consensus       175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~  253 (292)
T cd06657         175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-KLKNLHKVSPSLKGFLDRL  253 (292)
T ss_pred             ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCc-ccCCcccCCHHHHHHHHHH
Confidence            356889999999998878899999999999999999999999887666555554432221 1112346789999999999


Q ss_pred             CccCCCCCCCHHHHHcCCcCC
Q 048594          257 LIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       257 L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      |..+|.+||++.+++.||||.
T Consensus       254 l~~~P~~R~~~~~ll~~~~~~  274 (292)
T cd06657         254 LVRDPAQRATAAELLKHPFLA  274 (292)
T ss_pred             HhCCcccCcCHHHHhcChHHh
Confidence            999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=4.1e-34  Score=278.77  Aligned_cols=218  Identities=21%  Similarity=0.323  Sum_probs=180.2

Q ss_pred             cceEEeeeecccCceeEEEEEE-----CCCCCEEEEEEeccCCC------------------------------CCcCeE
Q 048594           49 LHFTIAEELCRGESGRIYLCTE-----NSTGLQFACKSISKTSK------------------------------SDEGYL   93 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~~avK~~~~~~~------------------------------~~~~~l   93 (483)
                      ..|.+.+.||+|+||.||++.+     ..++..+|+|.+.....                              ....|+
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            5799999999999999999985     33456799999865421                              111299


Q ss_pred             EEeccCCCChHHHHhcCC-------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEE
Q 048594           94 KREHCDGGTLVDRISDRE-------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA  160 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~-------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl  160 (483)
                      |+||+++++|.+++...+             .+++..+..++.||+.||+|||++|++||||||+||++   +..+.++|
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili---~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---ccCCcEEe
Confidence            999999999999997543             48999999999999999999999999999999999999   56788999


Q ss_pred             eecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccC
Q 048594          161 TDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREID  236 (483)
Q Consensus       161 ~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~  236 (483)
                      +|||.+........   .....+++.|+|||.+.+..++.++|+|||||++|+|++ |.+||...........+..+...
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~  241 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL  241 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcC
Confidence            99999876532221   112335678999999988888999999999999999998 99999888877777777766532


Q ss_pred             CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          237 FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       237 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ..   ....+.++.+++.+||+.+|.+|||+.+++.
T Consensus       242 ~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         242 QR---PRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            21   1357889999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=7.6e-34  Score=271.81  Aligned_cols=217  Identities=21%  Similarity=0.384  Sum_probs=179.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------cCeEEEeccC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------EGYLKREHCD   99 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~lv~E~~~   99 (483)
                      ++|++.+.||+|+||.||++..+ .+..+|+|.+.......                             ..|+||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            46899999999999999999876 45689999886543211                             1189999999


Q ss_pred             CCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec--
Q 048594          100 GGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE--  176 (483)
Q Consensus       100 g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~--  176 (483)
                      |++|.+++... +.+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+..........  
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05114          83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV---SSTGVVKVSDFGMTRYVLDDEYTSSS  159 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEE---cCCCeEEECCCCCccccCCCceeccC
Confidence            99999999753 568999999999999999999999999999999999999   567789999999987654322211  


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ...++..|+|||.+.+..++.++|+||+|+++|+|++ |+.||...+.......+..+.....+   ...+..+.+++.+
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~li~~  236 (256)
T cd05114         160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP---KLASMTVYEVMYS  236 (256)
T ss_pred             CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC---CCCCHHHHHHHHH
Confidence            2234567999999988888999999999999999999 99999888888888877765432211   2467889999999


Q ss_pred             hCccCCCCCCCHHHHHc
Q 048594          256 MLIRDPNNQITVAQILK  272 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~  272 (483)
                      ||..+|.+|||++++++
T Consensus       237 c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         237 CWHEKPEGRPTFAELLR  253 (256)
T ss_pred             HccCCcccCcCHHHHHH
Confidence            99999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-34  Score=282.88  Aligned_cols=226  Identities=31%  Similarity=0.476  Sum_probs=174.7

Q ss_pred             ceEEeeeecccCceeEEEEEECC--CCCEEEEEEeccCCC---------------------------------C--CcCe
Q 048594           50 HFTIAEELCRGESGRIYLCTENS--TGLQFACKSISKTSK---------------------------------S--DEGY   92 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~--~~~~~avK~~~~~~~---------------------------------~--~~~~   92 (483)
                      +|.+.+.||+|++|.||+|.++.  ++..||+|.+.....                                 .  ...|
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            48899999999999999999998  899999999987320                                 0  1129


Q ss_pred             EEEeccCCCChHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee-CCCCCcEEEeecccc
Q 048594           93 LKREHCDGGTLVDRISDR-----ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT-DDENATLKATDFGLA  166 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~-~~~~~~ikl~Dfg~a  166 (483)
                      +|+||+.+ +|.+.+...     ..+++..+..++.||+.||.|||+++++||||||+||++.. .+..+.+||+|||++
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~  159 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA  159 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence            99999976 677766432     36899999999999999999999999999999999999953 112789999999998


Q ss_pred             eeccCCce----ecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHH---------HHHHHHc
Q 048594          167 FFFEEGKV----YEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYG---------TLTAIMS  232 (483)
Q Consensus       167 ~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~---------~~~~i~~  232 (483)
                      ........    .....+++.|+|||.+.+. .++.++|+|||||++++|++|.+||.+.....         .+..+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (316)
T cd07842         160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE  239 (316)
T ss_pred             cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence            86543221    2234678899999987653 57889999999999999999999997654321         1111100


Q ss_pred             ccc---------------------CCCCCCCC------------CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          233 REI---------------------DFKSDPWP------------TISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       233 ~~~---------------------~~~~~~~~------------~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ...                     ......++            ..+..+.++|.+||++||.+|||+.+++.||||
T Consensus       240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            000                     00011111            466789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=2.9e-34  Score=279.46  Aligned_cols=229  Identities=31%  Similarity=0.558  Sum_probs=192.0

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEE
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKR   95 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~   95 (483)
                      ++..+.|.+.+.||+|++|.||+|.++.++..+|+|++......                             ...|+|+
T Consensus        15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            35677799999999999999999999999999999999765420                             1119999


Q ss_pred             eccCCCChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-
Q 048594           96 EHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-  173 (483)
                      ||++|++|.+++.... .+++..+..++.||+.||.|||+.|++|+||+|+||++   +.++.++|+|||.+....... 
T Consensus        95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~  171 (286)
T cd06614          95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL---SKDGSVKLADFGFAAQLTKEKS  171 (286)
T ss_pred             eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE---cCCCCEEECccchhhhhccchh
Confidence            9999999999998876 89999999999999999999999999999999999999   567789999999886554321 


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ......+++.|+|||.+.+..++.++|+||+||++|+|++|..||...........+...... .....+.++..+.+||
T Consensus       172 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li  250 (286)
T cd06614         172 KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP-PLKNPEKWSPEFKDFL  250 (286)
T ss_pred             hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-CCcchhhCCHHHHHHH
Confidence            122345788999999998878899999999999999999999999877665555555443322 1112234789999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcCC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+||+.+|.+|||+.+++.||||.
T Consensus       251 ~~~l~~~p~~Rpt~~~il~~~~~~  274 (286)
T cd06614         251 NKCLVKDPEKRPSAEELLQHPFLK  274 (286)
T ss_pred             HHHhccChhhCcCHHHHhhChHhh
Confidence            999999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=1.6e-33  Score=278.55  Aligned_cols=224  Identities=26%  Similarity=0.414  Sum_probs=185.8

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cC
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EG   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~   91 (483)
                      .+....|...+.||+|+||.||++++..+|..+|+|.+.......                                 ..
T Consensus        21 ~~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  100 (317)
T cd06635          21 EDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTA  100 (317)
T ss_pred             CCchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeE
Confidence            455667899999999999999999999999999999987542111                                 11


Q ss_pred             eEEEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           92 YLKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      |+|+||+.| +|.+.+.. ..++++..+..++.||+.||.|||+++++|+||+|+||++   +..+.++|+|||.+....
T Consensus       101 ~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~---~~~~~~kl~dfg~~~~~~  176 (317)
T cd06635         101 WLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASIAS  176 (317)
T ss_pred             EEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE---CCCCCEEEecCCCccccC
Confidence            899999986 77777754 5679999999999999999999999999999999999999   567789999999887543


Q ss_pred             CCceecccccCCcccCccccC---CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          171 EGKVYEEVVGTPLYMAPELLG---PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       171 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      ..   ....|++.|+|||.+.   ...++.++|+||+||++|+|++|..||...........+.......  .....+++
T Consensus       177 ~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  251 (317)
T cd06635         177 PA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT--LQSNEWSD  251 (317)
T ss_pred             Cc---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC--CCCccccH
Confidence            32   3456888999999873   3467889999999999999999999998877666666655443321  12245778


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .++++|.+||+.+|.+||++.++++|+|+.
T Consensus       252 ~l~~li~~~l~~~p~~Rpt~~~il~~~~~~  281 (317)
T cd06635         252 YFRNFVDSCLQKIPQDRPTSEELLKHMFVL  281 (317)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence            999999999999999999999999999997

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.1e-35  Score=291.82  Aligned_cols=225  Identities=28%  Similarity=0.487  Sum_probs=194.6

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ..|..++.||-|+||.|+++....|...||+|.+.+.+.                                 .+.+|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            468889999999999999999999999999999987641                                 12229999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-----
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-----  170 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-----  170 (483)
                      +|++||++..+|.+-+-|+|..++.++..+.+|+++.|+.|+|||||||+||||   +..|.|||+|||++.-+.     
T Consensus       709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRWTHds  785 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS  785 (1034)
T ss_pred             eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccceecccc
Confidence            999999999999999999999999999999999999999999999999999999   788999999999975431     


Q ss_pred             ----CCc----------------------------------eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHh
Q 048594          171 ----EGK----------------------------------VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLL  212 (483)
Q Consensus       171 ----~~~----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll  212 (483)
                          .+.                                  .....+||+.|+|||++....|+..+|+||.|||||+|+
T Consensus       786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~  865 (1034)
T KOG0608|consen  786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML  865 (1034)
T ss_pred             ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence                000                                  011257999999999999999999999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCC---CHHHHHcCCcCC
Q 048594          213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI---TVAQILKHPWLN  277 (483)
Q Consensus       213 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---t~~e~L~h~~~~  277 (483)
                      .|++||......++...+.+....+......+++.++.++|.++. .+++.|+   .++++..||||+
T Consensus       866 ~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFk  932 (1034)
T KOG0608|consen  866 VGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFK  932 (1034)
T ss_pred             hCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCcccc
Confidence            999999998888887777776655555556789999999998864 5678887   577899999998

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=5.9e-34  Score=279.27  Aligned_cols=227  Identities=29%  Similarity=0.470  Sum_probs=183.1

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------------   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------------   89 (483)
                      ...++|++.+.||.|++|.||+|.++.+|+.||+|.+.......                                    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            34568999999999999999999999999999999996532110                                    


Q ss_pred             ------cCeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEee
Q 048594           90 ------EGYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD  162 (483)
Q Consensus        90 ------~~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~D  162 (483)
                            ..|+|+||+.+ ++...+... ..+++..+..++.||+.||+|||+.+|+|+||+|+||++   +.++.+||+|
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~kl~d  159 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIKLAD  159 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCcEEeCc
Confidence                  22799999987 777777654 479999999999999999999999999999999999999   6778999999


Q ss_pred             cccceeccCCc--eecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC
Q 048594          163 FGLAFFFEEGK--VYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS  239 (483)
Q Consensus       163 fg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (483)
                      ||.+.......  ......+++.|+|||.+.+. .++.++||||+||++++|++|++||........+..+.........
T Consensus       160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~  239 (302)
T cd07864         160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCP  239 (302)
T ss_pred             ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence            99987664332  22233567789999987643 4688999999999999999999999877666555554432111000


Q ss_pred             --------------------------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          240 --------------------------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       240 --------------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                                                ..+..+|..+.++|.+||..+|.+|||+.+++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         240 AVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             hhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                                      1123468999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=5.9e-34  Score=274.49  Aligned_cols=220  Identities=25%  Similarity=0.401  Sum_probs=173.6

Q ss_pred             EeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEEeccCCCC
Q 048594           53 IAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKREHCDGGT  102 (483)
Q Consensus        53 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~E~~~g~~  102 (483)
                      ....||+|+||.||+|.+..++..+|+|.+......                              ...|+|+||+.+++
T Consensus        12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   91 (268)
T cd06624          12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGS   91 (268)
T ss_pred             ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCC
Confidence            345799999999999999999999999998764311                              11299999999999


Q ss_pred             hHHHHhcC-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-eeccc
Q 048594          103 LVDRISDR-ERY--TERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYEEV  178 (483)
Q Consensus       103 L~~~l~~~-~~l--~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~~~~  178 (483)
                      |.+++... .++  ++..+..++.||+.||.|||+++|+||||+|+||++..  ..+.++|+|||.+....... .....
T Consensus        92 L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~--~~~~~~l~dfg~~~~~~~~~~~~~~~  169 (268)
T cd06624          92 LSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT--YSGVVKISDFGTSKRLAGINPCTETF  169 (268)
T ss_pred             HHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCeEEEecchhheecccCCCccccC
Confidence            99999764 455  88899999999999999999999999999999999942  25689999999987653322 22234


Q ss_pred             ccCCcccCccccCCCC--CCCcCchHHHHHHHHHHhhCCCCCCCCChHHH-HHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          179 VGTPLYMAPELLGPCK--YGKEIDIWSAGLILYNLLSGAQPFWAESLYGT-LTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       179 ~gt~~y~aPE~~~~~~--~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      .|++.|+|||.+....  ++.++|+||+|+++|+|++|..||........ .....  ...........+++++++|+.+
T Consensus       170 ~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~  247 (268)
T cd06624         170 TGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVG--MFKIHPEIPESLSAEAKNFILR  247 (268)
T ss_pred             CCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhh--hhccCCCCCcccCHHHHHHHHH
Confidence            5788999999986543  78899999999999999999999975432221 11111  0011111123578899999999


Q ss_pred             hCccCCCCCCCHHHHHcCCcC
Q 048594          256 MLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ||..+|.+|||+.+++.||||
T Consensus       248 ~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         248 CFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             HcCCCchhCCCHHHHHhCCCC
Confidence            999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=9.4e-34  Score=271.74  Aligned_cols=220  Identities=26%  Similarity=0.458  Sum_probs=181.4

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------------CcCeEE
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------------DEGYLK   94 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------------~~~~lv   94 (483)
                      +|.+.+.||+|++|+||++.+..++..+++|++......                                   ...|+|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            589999999999999999999988877777776542210                                   011899


Q ss_pred             EeccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           95 REHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      +||+++++|.+++..    ...+++..+..++.|++.||.|||+.|++|+||+|+||++.    .+.++|+|||.+....
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEeecccCceeecC
Confidence            999999999988853    35799999999999999999999999999999999999994    2469999999987654


Q ss_pred             CCc-eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          171 EGK-VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       171 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      ... ......|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...........+.......   ....++.++
T Consensus       157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  233 (260)
T cd08222         157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPS---LPETYSRQL  233 (260)
T ss_pred             CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC---CcchhcHHH
Confidence            322 2234567889999999887788899999999999999999999998776666666555432221   123578899


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .++|.+||..+|++||++.++++||||
T Consensus       234 ~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         234 NSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=3.7e-34  Score=278.92  Aligned_cols=222  Identities=29%  Similarity=0.482  Sum_probs=178.7

Q ss_pred             ceEEeeeecccCceeEEEEEEC---CCCCEEEEEEeccCCCC-----------------------------------CcC
Q 048594           50 HFTIAEELCRGESGRIYLCTEN---STGLQFACKSISKTSKS-----------------------------------DEG   91 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~-----------------------------------~~~   91 (483)
                      +|.+.+.||+|++|.||+|.+.   .++..+|+|++.+....                                   ...
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4889999999999999999864   46789999998643110                                   011


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+|+||+.+++|.+++.....+++..+..++.|++.+|.|||+.+++|+||+|.||++   +.++.++|+|||++.....
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~  157 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL---DSEGHVVLTDFGLSKEFLA  157 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEEECcccccccc
Confidence            8999999999999999887889999999999999999999999999999999999999   5677899999999876543


Q ss_pred             Cce--ecccccCCcccCccccCCCC--CCCcCchHHHHHHHHHHhhCCCCCCCCChH----HHHHHHHccccCCCCCCCC
Q 048594          172 GKV--YEEVVGTPLYMAPELLGPCK--YGKEIDIWSAGLILYNLLSGAQPFWAESLY----GTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       172 ~~~--~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslGvil~~ll~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~  243 (483)
                      ...  .....|++.|+|||.+.+..  .+.++|+||+|+++|+|++|..||......    .....+....    .+...
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~  233 (288)
T cd05583         158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK----PPFPK  233 (288)
T ss_pred             ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC----CCCCc
Confidence            221  12346888999999987654  678999999999999999999999643322    2222332222    22234


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCC---HHHHHcCCcCCC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQIT---VAQILKHPWLNY  278 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t---~~e~L~h~~~~~  278 (483)
                      .++..+.++|.+||+.+|++|||   +.++|+||||+.
T Consensus       234 ~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~  271 (288)
T cd05583         234 TMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQG  271 (288)
T ss_pred             ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCccccc
Confidence            57899999999999999999998   567899999983

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=3.8e-34  Score=281.21  Aligned_cols=219  Identities=21%  Similarity=0.270  Sum_probs=175.3

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCE--EEEEEeccCCCC--------------------------------CcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQ--FACKSISKTSKS--------------------------------DEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~--~avK~~~~~~~~--------------------------------~~~~lv   94 (483)
                      ++|.+.+.||+|+||.||+|.++.++..  +|+|.+......                                ...|+|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            5799999999999999999999887764  577776542110                                111999


Q ss_pred             EeccCCCChHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           95 REHCDGGTLVDRISDRE----------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                      +||+++++|.+++...+                .+++..+..++.||+.||+|||++|++||||||+|||+   +..+.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili---~~~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe---cCCCcE
Confidence            99999999999996542                57899999999999999999999999999999999999   567789


Q ss_pred             EEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCC
Q 048594          159 KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDF  237 (483)
Q Consensus       159 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~  237 (483)
                      +|+|||++.............++..|+|||.+.+..++.++||||+||++|+|++ |..||.+....+....+.... . 
T Consensus       164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~-  241 (303)
T cd05088         164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-R-  241 (303)
T ss_pred             EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC-c-
Confidence            9999999864322111112234567999999988788999999999999999998 999998777666665554321 1 


Q ss_pred             CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          238 KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       238 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                       .......++++.++|.+||+.+|++|||+++++.+
T Consensus       242 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         242 -LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             -CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence             11223578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=4.3e-34  Score=282.45  Aligned_cols=219  Identities=17%  Similarity=0.257  Sum_probs=178.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCE----EEEEEeccCCCC------------------------------CcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQ----FACKSISKTSKS------------------------------DEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~----~avK~~~~~~~~------------------------------~~~~lv   94 (483)
                      .+|++.+.||+|+||.||+|.+..++..    +|+|.+......                              ...++|
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v   86 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   86 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence            5799999999999999999998766654    899998643211                              111899


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      +||+.+|+|.+++... ..+++..+..++.||+.||+|||+++|+||||||+||++   +.++.+||+|||.+.......
T Consensus        87 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill---~~~~~~kl~DfG~a~~~~~~~  163 (316)
T cd05108          87 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGADE  163 (316)
T ss_pred             eecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe---cCCCcEEEccccccccccCCC
Confidence            9999999999999874 468999999999999999999999999999999999999   566789999999998765332


Q ss_pred             ee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          174 VY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       174 ~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      ..   ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+......... .......+.  .+..+.++
T Consensus       164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~  240 (316)
T cd05108         164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-LEKGERLPQ--PPICTIDV  240 (316)
T ss_pred             cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HhCCCCCCC--CCCCCHHH
Confidence            21   12234567999999988889999999999999999997 9999987665554433 333222222  24577899


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .+++.+||..+|.+|||+.+++.+
T Consensus       241 ~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         241 YMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=7.2e-34  Score=271.83  Aligned_cols=213  Identities=21%  Similarity=0.303  Sum_probs=181.3

Q ss_pred             eeecccCceeEEEEEECCC---CCEEEEEEeccCCCCC-------------------------------cCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENST---GLQFACKSISKTSKSD-------------------------------EGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~---~~~~avK~~~~~~~~~-------------------------------~~~lv~E~~~g  100 (483)
                      +.||+|+||.||+|.+...   +..+|+|.+.......                               ..|+|+||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            4699999999999999866   8999999998764322                               01999999999


Q ss_pred             CChHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594          101 GTLVDRISDR---------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus       101 ~~L~~~l~~~---------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      ++|.+++...         ..+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEE---CCCCcEEEccccccccccc
Confidence            9999999875         789999999999999999999999999999999999999   5668999999999987654


Q ss_pred             Cc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          172 GK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       172 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      ..   ......+++.|+|||.+....++.++|+||+|+++|+|++ |..||...........+......   .....+|+
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~  234 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRL---PKPEYCPD  234 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCccCCh
Confidence            32   1233457888999999988788999999999999999999 69999888777777777653221   22246789


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ++.+++.+||..+|.+|||+.+++++
T Consensus       235 ~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         235 ELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHHh
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=7.9e-34  Score=272.87  Aligned_cols=218  Identities=21%  Similarity=0.294  Sum_probs=179.7

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------CcCeEEEeccC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------DEGYLKREHCD   99 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------~~~~lv~E~~~   99 (483)
                      .++|.+.+.||+|++|.||+|.+..+ ..+|+|.+......                            ...|+||||+.
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~   83 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS   83 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCC
Confidence            36799999999999999999998765 46999998753321                            11189999999


Q ss_pred             CCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee--
Q 048594          100 GGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY--  175 (483)
Q Consensus       100 g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~--  175 (483)
                      +++|.+++...  ..+++..+..++.|++.||.|||+.+++|+||+|+||++   +.++.++|+|||.+..+......  
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill---~~~~~~~L~dfg~~~~~~~~~~~~~  160 (262)
T cd05071          84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDNEYTAR  160 (262)
T ss_pred             CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEE---cCCCcEEeccCCceeeccccccccc
Confidence            99999999753  458999999999999999999999999999999999999   56778999999999866433221  


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....++..|+|||...+..++.++|+||+|+++|+|++ |..||.+.........+.....   ....+.++..+.++|.
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~  237 (262)
T cd05071         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR---MPCPPECPESLHDLMC  237 (262)
T ss_pred             cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC---CCCccccCHHHHHHHH
Confidence            12345677999999988789999999999999999999 8889988777776666654321   1122467899999999


Q ss_pred             HhCccCCCCCCCHHHHHc
Q 048594          255 RMLIRDPNNQITVAQILK  272 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~  272 (483)
                      +||+++|.+|||+.+++.
T Consensus       238 ~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         238 QCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             HHccCCcccCCCHHHHHH
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=6.2e-34  Score=272.66  Aligned_cols=211  Identities=19%  Similarity=0.252  Sum_probs=174.8

Q ss_pred             eecccCceeEEEEEE--CCCCCEEEEEEeccCCCC-------------------------------CcCeEEEeccCCCC
Q 048594           56 ELCRGESGRIYLCTE--NSTGLQFACKSISKTSKS-------------------------------DEGYLKREHCDGGT  102 (483)
Q Consensus        56 ~lg~G~~g~V~~~~~--~~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E~~~g~~  102 (483)
                      .||+|+||.||+|..  +.++..+|+|++......                               +..++|+||+.+++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            589999999999964  567889999998654311                               11189999999999


Q ss_pred             hHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee----ccc
Q 048594          103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY----EEV  178 (483)
Q Consensus       103 L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~----~~~  178 (483)
                      |.+++.....+++..+..++.||+.||+|||++|++||||||.||++   +.++.++|+|||.+.........    ...
T Consensus        82 L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05116          82 LNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL---VTQHYAKISDFGLSKALGADENYYKAKTHG  158 (257)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEE---cCCCeEEECCCccccccCCCCCeeeecCCC
Confidence            99999888889999999999999999999999999999999999999   56778999999999766433211    122


Q ss_pred             ccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhC
Q 048594          179 VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML  257 (483)
Q Consensus       179 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  257 (483)
                      .+++.|+|||.+....++.++|+|||||++|+|++ |..||.+.........+..+...   +..+..++++.++|.+||
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~l~~li~~~~  235 (257)
T cd05116         159 KWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERM---ECPQRCPPEMYDLMKLCW  235 (257)
T ss_pred             CCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC---CCCCCCCHHHHHHHHHHh
Confidence            34578999999987788899999999999999998 99999887777777776654321   122468899999999999


Q ss_pred             ccCCCCCCCHHHHHc
Q 048594          258 IRDPNNQITVAQILK  272 (483)
Q Consensus       258 ~~dP~~R~t~~e~L~  272 (483)
                      +.||.+||+++++..
T Consensus       236 ~~~p~~Rp~~~~i~~  250 (257)
T cd05116         236 TYGVDERPGFAVVEL  250 (257)
T ss_pred             ccCchhCcCHHHHHH
Confidence            999999999998864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=7.3e-34  Score=272.66  Aligned_cols=218  Identities=19%  Similarity=0.301  Sum_probs=180.7

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEecc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKREHC   98 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E~~   98 (483)
                      .++|++++.||+|++|.||+|... ++..+|+|.+......                             ...|+++||+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            357999999999999999999975 5678999998654311                             1118999999


Q ss_pred             CCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee-
Q 048594           99 DGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY-  175 (483)
Q Consensus        99 ~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~-  175 (483)
                      .+++|.+++...  ..+++..+..++.||+.||+|||+.+++|+||+|+||++   +..+.++|+|||.+......... 
T Consensus        84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~~~~~  160 (261)
T cd05072          84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNEYTA  160 (261)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEe---cCCCcEEECCCccceecCCCceec
Confidence            999999999653  568899999999999999999999999999999999999   56778999999999876433211 


Q ss_pred             -cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          176 -EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       176 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                       ....++..|+|||.+.+..++.++|+||+||++|+|++ |..||...........+.....   .+....++.++.+++
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li  237 (261)
T cd05072         161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR---MPRMENCPDELYDIM  237 (261)
T ss_pred             cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHH
Confidence             12335667999999988788999999999999999998 9999988777777777665422   223356789999999


Q ss_pred             HHhCccCCCCCCCHHHHHc
Q 048594          254 RRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+||..+|++|||++++++
T Consensus       238 ~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         238 KTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             HHHccCCcccCcCHHHHHH
Confidence            9999999999999999865

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.7e-34  Score=286.44  Aligned_cols=228  Identities=28%  Similarity=0.443  Sum_probs=183.1

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------   88 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------   88 (483)
                      ....+.++|.+.+.||+|+||.||+|.+..+|+.||+|.+.+....                                  
T Consensus        11 ~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~   90 (345)
T cd07877          11 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS   90 (345)
T ss_pred             HHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccc
Confidence            3456788999999999999999999999999999999998653210                                  


Q ss_pred             ----CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           89 ----DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        89 ----~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                          ...|++++++ |++|.+++.. ..+++..+..++.||+.||.|||+.+++||||||+||++   +.++.++|+|||
T Consensus        91 ~~~~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~dfg  165 (345)
T cd07877          91 LEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFG  165 (345)
T ss_pred             ccccccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---cCCCCEEEeccc
Confidence                0116777776 6789887764 479999999999999999999999999999999999999   567789999999


Q ss_pred             cceeccCCceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc--------
Q 048594          165 LAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI--------  235 (483)
Q Consensus       165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~--------  235 (483)
                      ++......  .....+++.|+|||.+.+ ..++.++|+||+||++|+|++|..||.+.........+.....        
T Consensus       166 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  243 (345)
T cd07877         166 LARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK  243 (345)
T ss_pred             cccccccc--ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence            98765332  234567899999998865 4578899999999999999999999977665444443322110        


Q ss_pred             ---------------CCCCC----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          236 ---------------DFKSD----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       236 ---------------~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                     ..+..    .+...++++.+||.+||+.||.+|||+.+++.||||.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~  304 (345)
T cd07877         244 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA  304 (345)
T ss_pred             hcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhh
Confidence                           00111    1124578899999999999999999999999999998

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=1.3e-33  Score=278.62  Aligned_cols=223  Identities=25%  Similarity=0.409  Sum_probs=183.5

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~   92 (483)
                      +..+.|...+.||+|++|+||+|++..+|..+|+|.+.......                                 ..|
T Consensus        18 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   97 (313)
T cd06633          18 DPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAW   97 (313)
T ss_pred             CHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence            44556888899999999999999999999999999987532110                                 118


Q ss_pred             EEEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           93 LKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +|+|||.| +|.+.+.. ..++++..+..++.||+.+|.|||++|++|+||+|+||++   ..++.++|+|||.+.....
T Consensus        98 lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili---~~~~~~kL~dfg~~~~~~~  173 (313)
T cd06633          98 LVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASKSSP  173 (313)
T ss_pred             EEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEE---CCCCCEEEeecCCCcccCC
Confidence            99999975 77777754 4578999999999999999999999999999999999999   5667899999998865322


Q ss_pred             CceecccccCCcccCccccC---CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          172 GKVYEEVVGTPLYMAPELLG---PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                         .....|+..|+|||.+.   ...++.++|+||+||++|+|++|..||...........+.....  +....+.++..
T Consensus       174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  248 (313)
T cd06633         174 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLQSNEWTDS  248 (313)
T ss_pred             ---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CCCCccccCHH
Confidence               23457888999999974   34578899999999999999999999988776665555544322  22223456788


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +++||.+||+++|.+||++.+++.||||+
T Consensus       249 l~~li~~~l~~~P~~Rp~~~~~l~~~~~~  277 (313)
T cd06633         249 FRGFVDYCLQKIPQERPASAELLRHDFVR  277 (313)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCcccC
Confidence            99999999999999999999999999998

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2.2e-34  Score=304.89  Aligned_cols=180  Identities=33%  Similarity=0.532  Sum_probs=145.5

Q ss_pred             eEEEeccCCCChHHHHhcCCCC-CHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           92 YLKREHCDGGTLVDRISDRERY-TERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l-~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      ||-||||+..+|.+++..+... ....++.++++|++||.|+|+.|||||||||.||++   +....|||+|||+|....
T Consensus       672 YIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFL---d~~~~VKIGDFGLAt~~~  748 (1351)
T KOG1035|consen  672 YIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFL---DSRNSVKIGDFGLATDLK  748 (1351)
T ss_pred             EEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEE---cCCCCeeecccccchhhh
Confidence            9999999997777777766544 467899999999999999999999999999999999   677899999999997621


Q ss_pred             -------------------CCceecccccCCcccCccccCCCC---CCCcCchHHHHHHHHHHhhCCCCCCCCCh-HHHH
Q 048594          171 -------------------EGKVYEEVVGTPLYMAPELLGPCK---YGKEIDIWSAGLILYNLLSGAQPFWAESL-YGTL  227 (483)
Q Consensus       171 -------------------~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslGvil~~ll~g~~pf~~~~~-~~~~  227 (483)
                                         +....+..+||..|+|||++.+..   |+.|+|+||||||++||+.   ||...-+ ...+
T Consensus       749 ~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL  825 (1351)
T KOG1035|consen  749 ENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASIL  825 (1351)
T ss_pred             hhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHH
Confidence                               011234568999999999997654   8999999999999999984   5755433 3456


Q ss_pred             HHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          228 TAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       228 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .++.++.++.+..-+..--+.-..+|.+||+.||.+||||.|+|++.||-
T Consensus       826 ~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  826 TNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             HhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence            66666665555222333445668999999999999999999999999996

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=6e-34  Score=278.58  Aligned_cols=218  Identities=17%  Similarity=0.158  Sum_probs=171.9

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCC---CCEEEEEEeccCCCC--------------------------C-------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENST---GLQFACKSISKTSKS--------------------------D-------   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~avK~~~~~~~~--------------------------~-------   89 (483)
                      ...++|.+.+.||+|+||+||+|.+..+   +..+|+|+.......                          .       
T Consensus         9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~   88 (294)
T PHA02882          9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY   88 (294)
T ss_pred             cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence            4457899999999999999999999877   677888864322110                          0       


Q ss_pred             ------------cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCc
Q 048594           90 ------------EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENAT  157 (483)
Q Consensus        90 ------------~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~  157 (483)
                                  ..|+++|++.. ++.+.+......++..+..++.||+.||.|||+++|+||||||+|||+   +..+.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill---~~~~~  164 (294)
T PHA02882         89 YGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV---DGNNR  164 (294)
T ss_pred             EEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCc
Confidence                        01567777654 677777666667899999999999999999999999999999999999   56778


Q ss_pred             EEEeecccceeccCCc--------eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh-HHH--
Q 048594          158 LKATDFGLAFFFEEGK--------VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL-YGT--  226 (483)
Q Consensus       158 ikl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~-~~~--  226 (483)
                      ++|+|||++..+....        ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+... ...  
T Consensus       165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~  244 (294)
T PHA02882        165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH  244 (294)
T ss_pred             EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence            9999999997653211        11234689999999999988899999999999999999999999977632 222  


Q ss_pred             ------HHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          227 ------LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       227 ------~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                            ...+..+..     ..+..+.++.+++..|+..+|.+||+++++++
T Consensus       245 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        245 AAKCDFIKRLHEGKI-----KIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HhHHHHHHHhhhhhh-----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                  222222222     23456889999999999999999999999875

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=8e-34  Score=278.03  Aligned_cols=219  Identities=21%  Similarity=0.247  Sum_probs=176.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCC--EEEEEEeccCCC--------------------------------CCcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGL--QFACKSISKTSK--------------------------------SDEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~~avK~~~~~~~--------------------------------~~~~~lv   94 (483)
                      ++|++.++||.|+||.||+|..+.++.  .+++|.+.....                                ....|+|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            579999999999999999999887765  468888764210                                0111899


Q ss_pred             EeccCCCChHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           95 REHCDGGTLVDRISDR----------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                      +||+++++|.+++...                ..+++..+..++.||+.||+|||++|++||||||+||++   +.++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV---GENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE---CCCCeE
Confidence            9999999999999653                248899999999999999999999999999999999999   567789


Q ss_pred             EEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCC
Q 048594          159 KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDF  237 (483)
Q Consensus       159 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~  237 (483)
                      ||+|||++..............+..|+|||.+....++.++|||||||++|+|++ |..||.+.........+.....  
T Consensus       159 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~--  236 (297)
T cd05089         159 KIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR--  236 (297)
T ss_pred             EECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC--
Confidence            9999999864322111111223456999999988788999999999999999997 9999988877776666654321  


Q ss_pred             CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          238 KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       238 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                       ......++..+.+||.+||..+|.+|||++++++.
T Consensus       237 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         237 -MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             -CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence             11224578999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=3.4e-34  Score=285.75  Aligned_cols=229  Identities=29%  Similarity=0.448  Sum_probs=184.7

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------C--C
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------S--D   89 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~--~   89 (483)
                      ..+.++|.+.+.||+|++|.||+|.++.+|..+|+|.+.....                                 .  .
T Consensus         3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~   82 (337)
T cd07852           3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK   82 (337)
T ss_pred             chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence            3567899999999999999999999999999999998754210                                 0  0


Q ss_pred             cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           90 EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ..|+|+||+.+ +|..++... .+++..+..++.||+.||.|||++||+|+||+|+||++   +.++.++|+|||.+...
T Consensus        83 ~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill---~~~~~~kl~d~g~~~~~  157 (337)
T cd07852          83 DIYLVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL---NSDCRVKLADFGLARSL  157 (337)
T ss_pred             eEEEEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccchhcc
Confidence            12899999975 899988776 88999999999999999999999999999999999999   67789999999998765


Q ss_pred             cCCc------eecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc--------
Q 048594          170 EEGK------VYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE--------  234 (483)
Q Consensus       170 ~~~~------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~--------  234 (483)
                      ....      ......|++.|+|||.+.+ ..++.++|+||+|+++|+|++|++||.+.........+....        
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  237 (337)
T cd07852         158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI  237 (337)
T ss_pred             ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence            4321      2233568899999998754 456889999999999999999999998766544433332211        


Q ss_pred             -------------------cCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          235 -------------------IDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       235 -------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                         ........+.++.++.++|.+||+.+|.+|||+.++++|||++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~  300 (337)
T cd07852         238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ  300 (337)
T ss_pred             HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence                               00111123457899999999999999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=1.1e-33  Score=271.28  Aligned_cols=219  Identities=20%  Similarity=0.279  Sum_probs=180.5

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------cCeEEEecc
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------EGYLKREHC   98 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------~~~lv~E~~   98 (483)
                      ..++|++.+.||+|++|.||+|..+ .+..+|+|.+.......                            ..|++|||+
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~   82 (260)
T cd05070           4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYM   82 (260)
T ss_pred             chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEec
Confidence            4568999999999999999999876 56679999987643211                            129999999


Q ss_pred             CCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee-
Q 048594           99 DGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY-  175 (483)
Q Consensus        99 ~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~-  175 (483)
                      .+++|.+++...  ..+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+..+...... 
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili---~~~~~~~l~dfg~~~~~~~~~~~~  159 (260)
T cd05070          83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILV---GDGLVCKIADFGLARLIEDNEYTA  159 (260)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE---eCCceEEeCCceeeeeccCccccc
Confidence            999999999753  458999999999999999999999999999999999999   56778999999999876433211 


Q ss_pred             -cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          176 -EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       176 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                       ....++..|+|||.+.+..++.++|+||||+++|+|++ |.+||.+.+..+....+.....   .+.....+..+.+++
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li  236 (260)
T cd05070         160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR---MPCPQDCPISLHELM  236 (260)
T ss_pred             ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCcCCHHHHHHH
Confidence             12234567999999988788999999999999999999 9999988777777777655321   122246789999999


Q ss_pred             HHhCccCCCCCCCHHHHHc
Q 048594          254 RRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+||.++|.+|||+.+++.
T Consensus       237 ~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         237 LQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             HHHcccCcccCcCHHHHHH
Confidence            9999999999999998864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=8.5e-34  Score=273.79  Aligned_cols=217  Identities=17%  Similarity=0.244  Sum_probs=176.9

Q ss_pred             eEEeeeecccCceeEEEEEECCCCC--EEEEEEeccCCCC--------------------------------------Cc
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGL--QFACKSISKTSKS--------------------------------------DE   90 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~--~~avK~~~~~~~~--------------------------------------~~   90 (483)
                      |.+.+.||+|+||.||+|....++.  .+|+|.+......                                      ..
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            3567899999999999999887775  6899987643100                                      01


Q ss_pred             CeEEEeccCCCChHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           91 GYLKREHCDGGTLVDRISD------RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~------~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                      .++++||+.+++|.+++..      ...+++..+..++.||+.||+|||+++|+||||||+||++   +.++.++|+|||
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg  157 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML---NENMNVCVADFG  157 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE---cCCCCEEECCCC
Confidence            1689999999999988742      2358999999999999999999999999999999999999   667889999999


Q ss_pred             cceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCC
Q 048594          165 LAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSD  240 (483)
Q Consensus       165 ~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~  240 (483)
                      .+.........   ....+++.|+|||.+.+..++.++|+||+|+++|+|++ |..||.+.........+..+...   .
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~  234 (272)
T cd05075         158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL---K  234 (272)
T ss_pred             cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC---C
Confidence            99876433221   12345678999999988889999999999999999999 89999887777777766655332   1


Q ss_pred             CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       241 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ..+.++..+.++|.+||+.+|.+|||+.+++++
T Consensus       235 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         235 QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            224678899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=1.7e-33  Score=270.89  Aligned_cols=219  Identities=22%  Similarity=0.343  Sum_probs=180.6

Q ss_pred             cceEEeeeecccCceeEEEEEECCC---CCEEEEEEeccCCCC-------------------------------CcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENST---GLQFACKSISKTSKS-------------------------------DEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~avK~~~~~~~~-------------------------------~~~~lv   94 (483)
                      ++|++.+.||+|+||+||+|..+.+   ...+|+|.+......                               ...|+|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            5799999999999999999998754   457999998754311                               111899


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-C
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-G  172 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~  172 (483)
                      +||+++++|.+++... +.+++..+..++.|++.||.|||+++|+|+||+|+||++   +.++.++|+|||.+..... .
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~~~~~~  160 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRRLEDSE  160 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCCEEECccchhhcccccc
Confidence            9999999999999764 578999999999999999999999999999999999999   5677899999999987642 1


Q ss_pred             cee--cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          173 KVY--EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       173 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      ...  ....+++.|+|||.+.+..++.++|+||||+++|+|++ |..||...........+......   +.....+..+
T Consensus       161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l  237 (266)
T cd05033         161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL---PPPMDCPSAL  237 (266)
T ss_pred             cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHHH
Confidence            111  12234567999999988889999999999999999998 99999887777776666554221   1224578999


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .+++.+||+.+|++||++.+++++
T Consensus       238 ~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         238 YQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHHHHHHcCCCcccCcCHHHHHHH
Confidence            999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-35  Score=315.41  Aligned_cols=228  Identities=26%  Similarity=0.485  Sum_probs=193.0

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC--------------------------------
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------------   91 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------------------------------   91 (483)
                      .+++.-+|.-...||.|.||.||-|.+..||...|+|-+.........                                
T Consensus      1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred             hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence            467788899999999999999999999999999999998765422111                                


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      ||.||||.||+|.+.+...+-.+|.....+..|++.|+.|||++|||||||||+||++   +.+|.+|++|||.|..+.+
T Consensus      1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L---d~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL---DFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred             HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee---ecCCcEEeecccceeEecC
Confidence            8999999999999999888888999999999999999999999999999999999999   6788999999999988754


Q ss_pred             Cc-----eecccccCCcccCccccCCCC---CCCcCchHHHHHHHHHHhhCCCCCCCC-ChHHHHHHHHcc-ccCCCCCC
Q 048594          172 GK-----VYEEVVGTPLYMAPELLGPCK---YGKEIDIWSAGLILYNLLSGAQPFWAE-SLYGTLTAIMSR-EIDFKSDP  241 (483)
Q Consensus       172 ~~-----~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslGvil~~ll~g~~pf~~~-~~~~~~~~i~~~-~~~~~~~~  241 (483)
                      ..     ......|||.|||||++.+..   -.-++|||||||++.||+||+.||..- +....+..+-.+ .+.+|   
T Consensus      1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P--- 1463 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIP--- 1463 (1509)
T ss_pred             chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCc---
Confidence            32     234568999999999997643   356899999999999999999999654 334444444433 33333   


Q ss_pred             CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          242 WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       242 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                       ..++++.++||..||+.||++|.++.|+|.|.|-+.
T Consensus      1464 -~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1464 -ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             -hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence             248999999999999999999999999999999873

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=1.7e-33  Score=269.99  Aligned_cols=220  Identities=20%  Similarity=0.287  Sum_probs=182.0

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------CcCeEEEec
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------DEGYLKREH   97 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------~~~~lv~E~   97 (483)
                      ...++|.+.++||+|+||.||+|..+ ++..+|+|.+......                            ...|+++||
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~   81 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEY   81 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEc
Confidence            45678999999999999999999865 5788999998764421                            112999999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      +.+++|.+++...  ..+++..+..++.||+.||+|||+.|++|+||+|+||++   +.++.++|+|||.+........ 
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05067          82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILV---SETLCCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEE---cCCCCEEEccCcceeecCCCCcc
Confidence            9999999998653  468999999999999999999999999999999999999   5677899999999977652221 


Q ss_pred             -ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          175 -YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       175 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                       .....++..|+|||.+....++.++|+||+|+++|++++ |.+||.+.+.......+.....   .+.....+.++.++
T Consensus       159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l  235 (260)
T cd05067         159 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR---MPRPDNCPEELYEL  235 (260)
T ss_pred             cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC---CCCCCCCCHHHHHH
Confidence             112345678999999988888999999999999999998 9999988877776666554321   12234578899999


Q ss_pred             HHHhCccCCCCCCCHHHHHc
Q 048594          253 IRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~  272 (483)
                      |.+||..+|++|||+++++.
T Consensus       236 i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         236 MRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             HHHHccCChhhCCCHHHHHH
Confidence            99999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=9.6e-34  Score=305.41  Aligned_cols=116  Identities=31%  Similarity=0.500  Sum_probs=104.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~   95 (483)
                      ++|.+++.||.|+||+||+|.+..+++.||||++......                                 ...|+||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            5799999999999999999999999999999999754211                                 1119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                      ||+.|++|.+++...+.+++..++.++.||+.||.|||+++|+||||||+|||+   +..+.++|+|||+++
T Consensus        84 Ey~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFGls~  152 (669)
T cd05610          84 EYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI---SNEGHIKLTDFGLSK  152 (669)
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE---cCCCCEEEEeCCCCc
Confidence            999999999999888889999999999999999999999999999999999999   566789999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=1.8e-33  Score=272.97  Aligned_cols=218  Identities=17%  Similarity=0.223  Sum_probs=177.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCC----EEEEEEeccCCCC------------------------------CcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGL----QFACKSISKTSKS------------------------------DEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~~avK~~~~~~~~------------------------------~~~~lv   94 (483)
                      ++|++.+.||+|+||+||+|....+|.    .+|+|.+......                              ...+++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i   86 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV   86 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence            478999999999999999999987776    4777877532210                              011799


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      +||+.+|+|.+++... +.+++..+..++.||+.||.|||+++++|+||||+||++   +.++.+||+|||.+.......
T Consensus        87 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili---~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADLLYPDD  163 (279)
T ss_pred             EEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEEcCCccceeccCCC
Confidence            9999999999999764 578999999999999999999999999999999999999   567889999999998654322


Q ss_pred             ---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          174 ---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       174 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                         ......++..|+|||.+.+..++.++|+||+|+++|++++ |..||.+.........+..+....   .....+..+
T Consensus       164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  240 (279)
T cd05111         164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLA---QPQICTIDV  240 (279)
T ss_pred             cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCC---CCCCCCHHH
Confidence               1223456778999999988889999999999999999998 999998876665555554433221   112457789


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHc
Q 048594          250 KDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+++.+||..+|.+|||+.++++
T Consensus       241 ~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         241 YMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHHHHHHcCCCcccCcCHHHHHH
Confidence            99999999999999999999876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=1e-33  Score=270.10  Aligned_cols=212  Identities=24%  Similarity=0.314  Sum_probs=172.1

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeEEEeccCCCCh
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYLKREHCDGGTL  103 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E~~~g~~L  103 (483)
                      +.||+|+||.||+|.++.+++.+|+|.+......                               ...|+|+||+.+++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            4699999999999999999999999987643211                               111899999999999


Q ss_pred             HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec---ccc
Q 048594          104 VDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE---EVV  179 (483)
Q Consensus       104 ~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~---~~~  179 (483)
                      .+++... ..+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+..........   ...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  157 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLV---TEKNVLKISDFGMSREEEDGVYASTGGMKQ  157 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEE---cCCCcEEECccccCcccccccccccCCCCC
Confidence            9999764 468999999999999999999999999999999999999   566789999999987654321111   112


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI  258 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  258 (483)
                      ++..|+|||.+.+..++.++|+||+|+++|+|++ |..||...........+.....   .......+..+.+++.+||+
T Consensus       158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~  234 (252)
T cd05084         158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR---LPCPELCPDAVYRLMERCWE  234 (252)
T ss_pred             CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC---CCCcccCCHHHHHHHHHHcC
Confidence            2456999999988889999999999999999997 9999977666665555544321   12224568999999999999


Q ss_pred             cCCCCCCCHHHHHc
Q 048594          259 RDPNNQITVAQILK  272 (483)
Q Consensus       259 ~dP~~R~t~~e~L~  272 (483)
                      .+|.+|||+.++++
T Consensus       235 ~~p~~Rps~~~~~~  248 (252)
T cd05084         235 YDPGQRPSFSTVHQ  248 (252)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=1.8e-33  Score=269.44  Aligned_cols=218  Identities=20%  Similarity=0.309  Sum_probs=179.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------cCeEEEeccC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------EGYLKREHCD   99 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~lv~E~~~   99 (483)
                      .+|++.+.||+|++|+||+|..+. +..+|+|.+.......                             ..|+||||+.
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            469999999999999999998763 4569999987543211                             1189999999


Q ss_pred             CCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec--
Q 048594          100 GGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE--  176 (483)
Q Consensus       100 g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~--  176 (483)
                      +++|.+++... ..+++..+..++.||+.||.|||+.+++|+||+|.||++   +.++.+||+|||.+..........  
T Consensus        83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05113          83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV---DDQGCVKVSDFGLSRYVLDDEYTSSV  159 (256)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCCEEECCCccceecCCCceeecC
Confidence            99999999764 468999999999999999999999999999999999999   567789999999987654332211  


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ...++..|+|||.+.+..++.++|+||||+++|+|++ |..||...........+........   ....+..+++++.+
T Consensus       160 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~  236 (256)
T cd05113         160 GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYR---PHLASEKVYAIMYS  236 (256)
T ss_pred             CCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCC---CCCCCHHHHHHHHH
Confidence            1234567999999988788999999999999999998 9999987777666666665533322   13467899999999


Q ss_pred             hCccCCCCCCCHHHHHcC
Q 048594          256 MLIRDPNNQITVAQILKH  273 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h  273 (483)
                      ||..+|.+|||+.+++.+
T Consensus       237 cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         237 CWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             HcCCCcccCCCHHHHHHh
Confidence            999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.7e-33  Score=271.56  Aligned_cols=217  Identities=17%  Similarity=0.225  Sum_probs=177.7

Q ss_pred             eEEeeeecccCceeEEEEEECCC---CCEEEEEEeccCCCCC--------------------------------------
Q 048594           51 FTIAEELCRGESGRIYLCTENST---GLQFACKSISKTSKSD--------------------------------------   89 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~---~~~~avK~~~~~~~~~--------------------------------------   89 (483)
                      |.+.+.||+|+||.||+|....+   +..+|+|.+.......                                      
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            56889999999999999997653   4789999987532110                                      


Q ss_pred             cCeEEEeccCCCChHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeec
Q 048594           90 EGYLKREHCDGGTLVDRISDR------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF  163 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Df  163 (483)
                      ..++++||+++++|..++...      ..+++..+..++.||+.||.|||+.+++||||||+||++   +..+.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE---CCCCeEEECCc
Confidence            028999999999999988532      368999999999999999999999999999999999999   56778999999


Q ss_pred             ccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCC
Q 048594          164 GLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKS  239 (483)
Q Consensus       164 g~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (483)
                      |.+.........   ....++..|+|||.+....++.++||||+||++|+|++ |..||.+.........+.......  
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~--  235 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK--  235 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--
Confidence            999876433221   11234567999999988788999999999999999999 999998877777777666543221  


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                       .....+.++.+++.+||+.||.+|||+.+++++
T Consensus       236 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         236 -QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             -CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence             224678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=2.4e-33  Score=278.59  Aligned_cols=225  Identities=30%  Similarity=0.478  Sum_probs=180.5

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~   92 (483)
                      .+.++|.+.+.||.|+||.||+|.++.+|..+|+|.+.+....                                 ...|
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   86 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY   86 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence            4778999999999999999999999999999999987542210                                 1118


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|+||+ +++|.+++.. .++++..+..++.||+.||.|||+++++|+||+|.||++   +.++.++|+|||.+......
T Consensus        87 lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili---~~~~~~~l~dfg~~~~~~~~  161 (328)
T cd07856          87 FVTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQDPQ  161 (328)
T ss_pred             EEeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE---CCCCCEEeCccccccccCCC
Confidence            999999 4588887764 468899999999999999999999999999999999999   66788999999998764322


Q ss_pred             ceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcc------------------
Q 048594          173 KVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR------------------  233 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~------------------  233 (483)
                        .....+++.|+|||.+.+ ..++.++|+||+|+++|+|++|.+||.+.........+.+.                  
T Consensus       162 --~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (328)
T cd07856         162 --MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTL  239 (328)
T ss_pred             --cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhH
Confidence              234467889999998765 46789999999999999999999999776543322221110                  


Q ss_pred             ------cc--CCC-CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          234 ------EI--DFK-SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       234 ------~~--~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                            ..  ..+ ....+.+++.+.++|.+||+.+|.+|||+++++.||||.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~  292 (328)
T cd07856         240 RFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLA  292 (328)
T ss_pred             HHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccc
Confidence                  00  000 011245788999999999999999999999999999997

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-33  Score=270.72  Aligned_cols=218  Identities=20%  Similarity=0.327  Sum_probs=178.6

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------cCeEEEeccC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------EGYLKREHCD   99 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~lv~E~~~   99 (483)
                      .+|++.+.||+|++|.||+|.++ ++..+|+|.+.......                             ..|+|+||++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            35889999999999999999886 56789999987543211                             1189999999


Q ss_pred             CCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec--
Q 048594          100 GGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE--  176 (483)
Q Consensus       100 g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~--  176 (483)
                      |++|.+++... ..+++..+..++.||+.||.|||+++++||||||+||++   +.++.+||+|||.+..........  
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~dfg~~~~~~~~~~~~~~  159 (256)
T cd05059          83 NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV---GEDNVVKVSDFGLARYVLDDQYTSSQ  159 (256)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEE---CCCCcEEECCcccceecccccccccC
Confidence            99999999753 578999999999999999999999999999999999999   567789999999987654322111  


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ...++..|+|||.+.+..++.++|+||+|+++|+|++ |..||...........+..... .  ......+.++.+++.+
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~li~~  236 (256)
T cd05059         160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR-L--YRPKLAPTEVYTIMYS  236 (256)
T ss_pred             CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc-C--CCCCCCCHHHHHHHHH
Confidence            1123346999999988889999999999999999999 8999988777777666654421 1  1224578999999999


Q ss_pred             hCccCCCCCCCHHHHHcC
Q 048594          256 MLIRDPNNQITVAQILKH  273 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h  273 (483)
                      ||..+|.+|||+.++++.
T Consensus       237 cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         237 CWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             HhcCChhhCcCHHHHHHH
Confidence            999999999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.3e-33  Score=268.23  Aligned_cols=218  Identities=19%  Similarity=0.261  Sum_probs=180.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------cCeEEEecc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------EGYLKREHC   98 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~lv~E~~   98 (483)
                      .++|.+.+.||+|++|.||+|.++ ++..||+|.+.......                             ..|+|+||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM   83 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence            467999999999999999999976 45789999987643111                             118999999


Q ss_pred             CCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee-
Q 048594           99 DGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY-  175 (483)
Q Consensus        99 ~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~-  175 (483)
                      .|++|.+++....  .+++..+..++.||+.||.|||+++++|+||||+||++   +.++.++|+|||.+......... 
T Consensus        84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~  160 (261)
T cd05068          84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLV---GENNICKVADFGLARVIKEDIYEA  160 (261)
T ss_pred             cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEE---cCCCCEEECCcceEEEccCCcccc
Confidence            9999999997654  68999999999999999999999999999999999999   56778999999999876532211 


Q ss_pred             -cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          176 -EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       176 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                       .....+..|+|||.+.+..++.++|+||||+++|+|++ |..||.+.........+.... ..  ......+..+.+++
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~li  237 (261)
T cd05068         161 REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY-RM--PCPPGCPKELYDIM  237 (261)
T ss_pred             cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CC--CCCCcCCHHHHHHH
Confidence             11122357999999988888999999999999999999 999998887777777665442 11  12246789999999


Q ss_pred             HHhCccCCCCCCCHHHHHc
Q 048594          254 RRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+||+.+|.+||++.+++.
T Consensus       238 ~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         238 LDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             HHHhhcCcccCCCHHHHHH
Confidence            9999999999999999865

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.3e-33  Score=275.65  Aligned_cols=220  Identities=21%  Similarity=0.295  Sum_probs=179.9

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCC-----CEEEEEEeccCCCC--------------------------------Cc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTG-----LQFACKSISKTSKS--------------------------------DE   90 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~--------------------------------~~   90 (483)
                      .++|++.+.||+|++|.||++.++..+     ..+|+|.+......                                ..
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~   90 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP   90 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence            467999999999999999999986443     78999998753211                                01


Q ss_pred             CeEEEeccCCCChHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCC
Q 048594           91 GYLKREHCDGGTLVDRISD----------------RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE  154 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~----------------~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~  154 (483)
                      .|++|||+.+++|.+++..                ...+++..+..++.||+.||.|||+++|+|+||||+||++   +.
T Consensus        91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~---~~  167 (293)
T cd05053          91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV---TE  167 (293)
T ss_pred             eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE---cC
Confidence            1899999999999999964                2468999999999999999999999999999999999999   56


Q ss_pred             CCcEEEeecccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHH
Q 048594          155 NATLKATDFGLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAI  230 (483)
Q Consensus       155 ~~~ikl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i  230 (483)
                      ++.++|+|||.+..+......   ....++..|+|||.+.+..++.++||||+||++|+|++ |..||.+.........+
T Consensus       168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  247 (293)
T cd05053         168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLL  247 (293)
T ss_pred             CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence            779999999999876433211   11234567999999988889999999999999999997 99999887776766666


Q ss_pred             HccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          231 MSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ......   ......+..+.+|+.+||..+|.+|||+.+++++
T Consensus       248 ~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         248 KEGYRM---EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             HcCCcC---CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            544321   1223568899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-35  Score=289.27  Aligned_cols=218  Identities=21%  Similarity=0.355  Sum_probs=180.4

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------CeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------GYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~~lv~E~   97 (483)
                      ++..+...||+|+||+||+|.+.-   .||||++......++                               ..||+.+
T Consensus       392 ~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqw  468 (678)
T KOG0193|consen  392 EEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQW  468 (678)
T ss_pred             HHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehh
Confidence            567778999999999999999874   499999987653222                               2899999


Q ss_pred             cCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC---Cc
Q 048594           98 CDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE---GK  173 (483)
Q Consensus        98 ~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~---~~  173 (483)
                      |+|.+|..+|... ..|.....+.|++||++|+.|||.++|||||||..||++   .+.+.|||+|||++..-..   ..
T Consensus       469 CeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLatvk~~w~g~~  545 (678)
T KOG0193|consen  469 CEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLATVKTRWSGEQ  545 (678)
T ss_pred             ccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccceeeeeeecccc
Confidence            9999999999754 568999999999999999999999999999999999999   5558999999999876442   22


Q ss_pred             eecccccCCcccCccccC---CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC-CCCCCCCCHHH
Q 048594          174 VYEEVVGTPLYMAPELLG---PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK-SDPWPTISSSA  249 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~  249 (483)
                      ......|...|||||++.   ..+|++.+||||+|+++|||++|..||........+..+-++..... .....+.+.++
T Consensus       546 q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~m  625 (678)
T KOG0193|consen  546 QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAM  625 (678)
T ss_pred             ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHH
Confidence            334556788899999985   45789999999999999999999999997666666666666533221 12234667899


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHc
Q 048594          250 KDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ++|+..||.++|++||...++|.
T Consensus       626 k~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  626 KRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHHHHHhcCcccCccHHHHHH
Confidence            99999999999999999999887

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1.6e-33  Score=269.62  Aligned_cols=214  Identities=22%  Similarity=0.318  Sum_probs=177.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEeccC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKREHCD   99 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E~~~   99 (483)
                      .+|.+.+.||+|++|.||++...  |..+|+|.+......                             ...|+|+||++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~   83 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   83 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence            47999999999999999999765  788999998654311                             11289999999


Q ss_pred             CCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecc
Q 048594          100 GGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE  177 (483)
Q Consensus       100 g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~  177 (483)
                      +++|.+++.+..  .+++..+..++.||+.||+|||++|++||||||+||++   +.++.+||+|||.+.......  ..
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~~--~~  158 (256)
T cd05082          84 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQ--DT  158 (256)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE---cCCCcEEecCCccceeccccC--CC
Confidence            999999997653  48899999999999999999999999999999999999   567899999999987654322  22


Q ss_pred             cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHh
Q 048594          178 VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM  256 (483)
Q Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  256 (483)
                      ..++..|+|||.+.+..++.++|+||+||++|+|++ |..||...........+.....   ....+.+++.+.++|.+|
T Consensus       159 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~  235 (256)
T cd05082         159 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPVVYDVMKQC  235 (256)
T ss_pred             CccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCCHHHHHHHHHH
Confidence            344667999999988888999999999999999997 9999987776666666554321   222356789999999999


Q ss_pred             CccCCCCCCCHHHHHc
Q 048594          257 LIRDPNNQITVAQILK  272 (483)
Q Consensus       257 L~~dP~~R~t~~e~L~  272 (483)
                      |..+|++|||+.++++
T Consensus       236 l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         236 WHLDAATRPSFLQLRE  251 (256)
T ss_pred             hcCChhhCcCHHHHHH
Confidence            9999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-33  Score=272.21  Aligned_cols=220  Identities=20%  Similarity=0.261  Sum_probs=180.1

Q ss_pred             cccceEEeeeecccCceeEEEEEECCC-----CCEEEEEEeccCCCC-------------------------------Cc
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENST-----GLQFACKSISKTSKS-------------------------------DE   90 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~avK~~~~~~~~-------------------------------~~   90 (483)
                      ..++|.+.+.||+|+||.||+|..+..     +..+|+|.+......                               ..
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   83 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP   83 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence            356899999999999999999998744     478999998654311                               11


Q ss_pred             CeEEEeccCCCChHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEE
Q 048594           91 GYLKREHCDGGTLVDRISDR----------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA  160 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~----------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl  160 (483)
                      .|+|+||+.+++|.+++...          ..+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill---~~~~~~kl  160 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMV---AEDLTVKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEE---cCCCCEEE
Confidence            19999999999999999653          236788999999999999999999999999999999999   56788999


Q ss_pred             eecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccC
Q 048594          161 TDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREID  236 (483)
Q Consensus       161 ~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~  236 (483)
                      +|||.+..+.....   .....++..|+|||.+.+..++.++|+|||||++|++++ |..||.+.+.......+......
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~  240 (277)
T cd05032         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHL  240 (277)
T ss_pred             CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCC
Confidence            99999876543321   123346778999999988788999999999999999998 99999888777777766643221


Q ss_pred             CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          237 FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       237 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                       .  .....+..+.++|.+||+.+|++|||+.+++.
T Consensus       241 -~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         241 -D--LPENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             -C--CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence             1  12346899999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.7e-33  Score=274.87  Aligned_cols=218  Identities=20%  Similarity=0.296  Sum_probs=179.5

Q ss_pred             cceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCCC------------------------------CcCeE
Q 048594           49 LHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSKS------------------------------DEGYL   93 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~------------------------------~~~~l   93 (483)
                      .+|.+.+.||+|+||.||+|.+.     .++..+|+|.+......                              ...++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            46899999999999999999854     34567999998654311                              11299


Q ss_pred             EEeccCCCChHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCc
Q 048594           94 KREHCDGGTLVDRISDRE----------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENAT  157 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~  157 (483)
                      ||||+++++|.+++...+                .+++..+..++.||+.||+|||+++++||||||+||++   +.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~---~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV---GANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---ccCCc
Confidence            999999999999997542                38899999999999999999999999999999999999   56779


Q ss_pred             EEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHcc
Q 048594          158 LKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSR  233 (483)
Q Consensus       158 ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~  233 (483)
                      ++|+|||.+........   .....+++.|+|||.+.+..++.++|+||+|+++|+|++ |..||...........+..+
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~  241 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG  241 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCC
Confidence            99999999876533221   122346778999999988888999999999999999998 99999888777777766655


Q ss_pred             ccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          234 EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .....   ....|..+.+++.+||+.+|.+|||+.++++
T Consensus       242 ~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         242 RVLER---PRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             CCCCC---CccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            43321   2356889999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.3e-33  Score=275.96  Aligned_cols=222  Identities=18%  Similarity=0.230  Sum_probs=179.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCC----------------CEEEEEEeccCCCC-----------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTG----------------LQFACKSISKTSKS-----------------------   88 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----------------~~~avK~~~~~~~~-----------------------   88 (483)
                      ..+|.+++.||+|+||.||+|.+..++                ..+|+|.+......                       
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            357999999999999999999877644                56899998764311                       


Q ss_pred             --------CcCeEEEeccCCCChHHHHhcCC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEE
Q 048594           89 --------DEGYLKREHCDGGTLVDRISDRE-----------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF  149 (483)
Q Consensus        89 --------~~~~lv~E~~~g~~L~~~l~~~~-----------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll  149 (483)
                              ...++++||+.+++|.+++....           .+++..+..++.||+.||.|||+++++|+||||+||++
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili  163 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee
Confidence                    12289999999999999997765           78999999999999999999999999999999999999


Q ss_pred             eeCCCCCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh--CCCCCCCCChH
Q 048594          150 TTDDENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS--GAQPFWAESLY  224 (483)
Q Consensus       150 ~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~--g~~pf~~~~~~  224 (483)
                         +..+.++|+|||.+........   .....+++.|+|||.+.+..++.++||||+||++|+|++  |..||......
T Consensus       164 ---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~  240 (296)
T cd05051         164 ---GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ  240 (296)
T ss_pred             ---cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence               5668999999999876533221   122345778999999988789999999999999999998  77888777666


Q ss_pred             HHHHHHHcc----ccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          225 GTLTAIMSR----EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       225 ~~~~~i~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ..+..+...    ......+..+..+.++.+++.+||+.+|.+|||+.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         241 QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            666665432    111111122456789999999999999999999999965

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.2e-33  Score=282.49  Aligned_cols=220  Identities=20%  Similarity=0.286  Sum_probs=173.2

Q ss_pred             ccceEEeeeecccCceeEEEEEE-----CCCCCEEEEEEeccCCCC---------------------------------C
Q 048594           48 KLHFTIAEELCRGESGRIYLCTE-----NSTGLQFACKSISKTSKS---------------------------------D   89 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~~avK~~~~~~~~---------------------------------~   89 (483)
                      .++|++.+.||+|+||.||+|.+     ..+++.||||.+......                                 .
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            36899999999999999999984     356789999998653211                                 0


Q ss_pred             cCeEEEeccCCCChHHHHhcC-----------------------------------------------------------
Q 048594           90 EGYLKREHCDGGTLVDRISDR-----------------------------------------------------------  110 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~-----------------------------------------------------------  110 (483)
                      ..|+|||||.+|+|.+++...                                                           
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            118999999999999998642                                                           


Q ss_pred             --------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce---ecccc
Q 048594          111 --------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV---YEEVV  179 (483)
Q Consensus       111 --------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~  179 (483)
                              ..+++..+..++.||+.||+|||+++|+||||||+||++   +.++.++|+|||++........   .....
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  242 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGDAR  242 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE---cCCCcEEEEecccccccccCcchhhcCCCC
Confidence                    136778889999999999999999999999999999999   5677899999999876532211   11223


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHH-HHHHHHccccCCCCCCCCCCCHHHHHHHHHhC
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYG-TLTAIMSREIDFKSDPWPTISSSAKDLIRRML  257 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  257 (483)
                      +++.|+|||.+.+..++.++|+||+|+++|+|++ |..||....... ....+..+. ....  ....++++.+++..||
T Consensus       243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~cl  319 (343)
T cd05103         243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRA--PDYTTPEMYQTMLDCW  319 (343)
T ss_pred             CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccC-CCCC--CCCCCHHHHHHHHHHc
Confidence            4667999999988788999999999999999997 999997654332 333333322 1111  1246789999999999


Q ss_pred             ccCCCCCCCHHHHHcC
Q 048594          258 IRDPNNQITVAQILKH  273 (483)
Q Consensus       258 ~~dP~~R~t~~e~L~h  273 (483)
                      +.+|.+|||+.++++|
T Consensus       320 ~~~p~~Rps~~eil~~  335 (343)
T cd05103         320 HGEPSQRPTFSELVEH  335 (343)
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=9.9e-34  Score=271.62  Aligned_cols=217  Identities=18%  Similarity=0.275  Sum_probs=181.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEEecc
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKREHC   98 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~E~~   98 (483)
                      .+|++.+.||.|++|.||+|.++. +..+|+|++......                              ...|+||||+
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   84 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM   84 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence            469999999999999999999987 889999998765421                              1118999999


Q ss_pred             CCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-e
Q 048594           99 DGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-Y  175 (483)
Q Consensus        99 ~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-~  175 (483)
                      ++++|.+++...  ..+++..+..++.||+.||.|||++|++|+||+|+||++   +.++.++|+|||.+........ .
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv---~~~~~~kl~d~g~~~~~~~~~~~~  161 (261)
T cd05148          85 EKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILV---GEDLVCKVADFGLARLIKEDVYLS  161 (261)
T ss_pred             ccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEE---cCCceEEEccccchhhcCCccccc
Confidence            999999999753  468999999999999999999999999999999999999   5677899999999876543221 1


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....++..|+|||.+....++.++|+||||+++|+|++ |..||.+......+..+.... ..  +.....++.+.++|.
T Consensus       162 ~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~i~  238 (261)
T cd05148         162 SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY-RM--PCPAKCPQEIYKIML  238 (261)
T ss_pred             cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCC-cC--CCCCCCCHHHHHHHH
Confidence            22345667999999988788999999999999999998 899998887777777766432 11  222467899999999


Q ss_pred             HhCccCCCCCCCHHHHHc
Q 048594          255 RMLIRDPNNQITVAQILK  272 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~  272 (483)
                      +||+.+|.+|||+.++++
T Consensus       239 ~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         239 ECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             HHcCCCchhCcCHHHHHH
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=2e-33  Score=273.11  Aligned_cols=219  Identities=19%  Similarity=0.254  Sum_probs=178.0

Q ss_pred             cceEEeeeecccCceeEEEEEEC----CCCCEEEEEEeccCCCC-------------------------------CcCeE
Q 048594           49 LHFTIAEELCRGESGRIYLCTEN----STGLQFACKSISKTSKS-------------------------------DEGYL   93 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~~avK~~~~~~~~-------------------------------~~~~l   93 (483)
                      .+|++.+.||+|+||+||+|...    .++..+|+|.+......                               ...|+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            46889999999999999999853    45678999999753211                               11199


Q ss_pred             EEeccCCCChHHHHhcC-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCC
Q 048594           94 KREHCDGGTLVDRISDR-----------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA  156 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~-----------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~  156 (483)
                      ||||+.+++|.+++...                 ..+++..+..++.||+.||.|||+++++|+||||+||++   +..+
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili---~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI---GEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE---cCCC
Confidence            99999999999998532                 247889999999999999999999999999999999999   5667


Q ss_pred             cEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHc
Q 048594          157 TLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS  232 (483)
Q Consensus       157 ~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~  232 (483)
                      .+||+|||++........   .....++..|+|||.+.+..++.++|+||+|+++|+|++ |..||.+.........+..
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  241 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRK  241 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            899999999976543221   122345667999999988788999999999999999998 9999988776666666554


Q ss_pred             cccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          233 REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ....   +....+++.+.+++.+||+.+|.+||++.+++++
T Consensus       242 ~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         242 RQLL---PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             CCcC---CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            4322   1224678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=3.6e-33  Score=267.82  Aligned_cols=218  Identities=20%  Similarity=0.290  Sum_probs=179.6

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------CcCeEEEeccC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------DEGYLKREHCD   99 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------~~~~lv~E~~~   99 (483)
                      .++|.+.+.||+|++|.||+|.+..+ ..+|+|.+......                            ...|+||||+.
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~   83 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMG   83 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCC
Confidence            36799999999999999999988755 46999988754311                            11189999999


Q ss_pred             CCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee--
Q 048594          100 GGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY--  175 (483)
Q Consensus       100 g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~--  175 (483)
                      +++|.+++...  ..+++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||.+.........  
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill---~~~~~~~l~dfg~~~~~~~~~~~~~  160 (260)
T cd05069          84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLARLIEDNEYTAR  160 (260)
T ss_pred             CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCeEEECCCccceEccCCccccc
Confidence            99999999754  348899999999999999999999999999999999999   66788999999999765433211  


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....++..|+|||.+.+..++.++|+||+|+++|+|++ |..||.+.........+.....   .......+..+.+++.
T Consensus       161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~  237 (260)
T cd05069         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR---MPCPQGCPESLHELMK  237 (260)
T ss_pred             CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCcccCHHHHHHHH
Confidence            12345667999999988788999999999999999999 9999988877777766655421   1223467899999999


Q ss_pred             HhCccCCCCCCCHHHHHc
Q 048594          255 RMLIRDPNNQITVAQILK  272 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~  272 (483)
                      +||.++|.+||+++++++
T Consensus       238 ~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         238 LCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             HHccCCcccCcCHHHHHH
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.6e-33  Score=267.32  Aligned_cols=212  Identities=19%  Similarity=0.256  Sum_probs=175.5

Q ss_pred             eeecccCceeEEEEEECCCC---CEEEEEEeccCCCC------------------------------CcCeEEEeccCCC
Q 048594           55 EELCRGESGRIYLCTENSTG---LQFACKSISKTSKS------------------------------DEGYLKREHCDGG  101 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~---~~~avK~~~~~~~~------------------------------~~~~lv~E~~~g~  101 (483)
                      +.||+|+||.||+|....++   ..+|+|.+......                              ...++|+||+.++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            46999999999999876555   78999998765431                              0118999999999


Q ss_pred             ChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec----c
Q 048594          102 TLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE----E  177 (483)
Q Consensus       102 ~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~----~  177 (483)
                      +|.+++.....+++..+..++.||+.||.|||..+++|+||||+||++   +.++.++|+|||.+..........    .
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili---~~~~~~kl~df~~~~~~~~~~~~~~~~~~  157 (257)
T cd05060          81 PLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLL---VNRHQAKISDFGMSRALGAGSDYYRATTA  157 (257)
T ss_pred             cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEE---cCCCcEEeccccccceeecCCcccccccC
Confidence            999999888889999999999999999999999999999999999999   567789999999988664332211    1


Q ss_pred             cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHh
Q 048594          178 VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM  256 (483)
Q Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  256 (483)
                      ..++..|+|||.+.+..++.++|+||||+++|++++ |.+||...+.......+.....   ......++..++++|.+|
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~c  234 (257)
T cd05060         158 GRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER---LPRPEECPQEIYSIMLSC  234 (257)
T ss_pred             ccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHH
Confidence            123457999999988889999999999999999998 9999988776666666654432   122346789999999999


Q ss_pred             CccCCCCCCCHHHHHc
Q 048594          257 LIRDPNNQITVAQILK  272 (483)
Q Consensus       257 L~~dP~~R~t~~e~L~  272 (483)
                      |..+|.+|||+.++++
T Consensus       235 l~~~p~~Rp~~~~l~~  250 (257)
T cd05060         235 WKYRPEDRPTFSELES  250 (257)
T ss_pred             hcCChhhCcCHHHHHH
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=2.4e-33  Score=275.98  Aligned_cols=221  Identities=20%  Similarity=0.287  Sum_probs=178.4

Q ss_pred             cccceEEeeeecccCceeEEEEEECC-------CCCEEEEEEeccCCCC-------------------------------
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENS-------TGLQFACKSISKTSKS-------------------------------   88 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~~avK~~~~~~~~-------------------------------   88 (483)
                      ..++|.+.+.||+|+||.||+|.+..       ++..+|+|.+......                               
T Consensus        16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (307)
T cd05098          16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   95 (307)
T ss_pred             ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence            34689999999999999999998643       3357999999754211                               


Q ss_pred             -CcCeEEEeccCCCChHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee
Q 048594           89 -DEGYLKREHCDGGTLVDRISDRE----------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT  151 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~  151 (483)
                       ...|+|+|||.+++|.+++....                .+++..+..++.||+.||+|||++|++||||||+||++  
T Consensus        96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill--  173 (307)
T cd05098          96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--  173 (307)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE--
Confidence             11189999999999999997542                47889999999999999999999999999999999999  


Q ss_pred             CCCCCcEEEeecccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHH
Q 048594          152 DDENATLKATDFGLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTL  227 (483)
Q Consensus       152 ~~~~~~ikl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~  227 (483)
                       +.++.++|+|||.+.........   ....+++.|+|||.+.+..++.++|+||+||++|+|++ |..||.+.......
T Consensus       174 -~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~  252 (307)
T cd05098         174 -TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF  252 (307)
T ss_pred             -cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence             56678999999998765422111   11234567999999988788999999999999999998 88999877766666


Q ss_pred             HHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          228 TAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       228 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ..+.....   .......+.++.++|.+||..+|.+|||+.+++++
T Consensus       253 ~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         253 KLLKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HHHHcCCC---CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            66554432   11224678999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=2.4e-33  Score=276.14  Aligned_cols=223  Identities=26%  Similarity=0.412  Sum_probs=182.6

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~   92 (483)
                      ...+.|...+.||.|++|.||+|+++.++..+|+|.+......                                 ...|
T Consensus        12 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   91 (308)
T cd06634          12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW   91 (308)
T ss_pred             CcHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeE
Confidence            3456688899999999999999999999999999998643110                                 0118


Q ss_pred             EEEeccCCCChHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           93 LKREHCDGGTLVDRIS-DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~-~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +|+||+.| +|.+.+. ...++++..+..++.|++.||.|||+.+++|+||+|+||++   +..+.++|+|||.+.....
T Consensus        92 lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~  167 (308)
T cd06634          92 LVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAP  167 (308)
T ss_pred             EEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEE---CCCCcEEECCcccceeecC
Confidence            99999975 7877765 34568999999999999999999999999999999999999   5677899999999876543


Q ss_pred             CceecccccCCcccCccccC---CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          172 GKVYEEVVGTPLYMAPELLG---PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      .   ....+++.|+|||.+.   ...++.++||||+||++|+|++|..||...........+......  ......++..
T Consensus       168 ~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  242 (308)
T cd06634         168 A---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP--ALQSGHWSEY  242 (308)
T ss_pred             c---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCC--CcCcccccHH
Confidence            3   2446788999999874   345788999999999999999999999876655555554443322  1122357889


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +.++|.+||.++|.+||++.+++.|||+.
T Consensus       243 ~~~li~~cl~~~P~~Rp~~~~ll~~~~~~  271 (308)
T cd06634         243 FRNFVDSCLQKIPQDRPTSEVLLKHRFVL  271 (308)
T ss_pred             HHHHHHHHhhCCcccCCCHHHHhhCcccc
Confidence            99999999999999999999999999998

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.6e-33  Score=266.41  Aligned_cols=219  Identities=21%  Similarity=0.312  Sum_probs=181.3

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEec
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKREH   97 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E~   97 (483)
                      ..++|.+.+.||+|++|.||+|.++ .++.+|+|.+......                             ...|+|+||
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY   82 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence            3578999999999999999999976 4578999998764321                             112999999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      +++++|.+++...  ..+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+.........
T Consensus        83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~~~~~  159 (261)
T cd05034          83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILV---GENLVCKIADFGLARLIEDDEYT  159 (261)
T ss_pred             cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEE---cCCCCEEECccccceeccchhhh
Confidence            9999999999765  368999999999999999999999999999999999999   56789999999998876432111


Q ss_pred             --cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          176 --EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       176 --~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                        ....++..|+|||.+.+..++.++|+||+|+++|+|++ |+.||.+.........+.....   .......+.++.++
T Consensus       160 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  236 (261)
T cd05034         160 AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYR---MPRPPNCPEELYDL  236 (261)
T ss_pred             hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHH
Confidence              12234567999999988888999999999999999998 9999988877777777665421   11223568899999


Q ss_pred             HHHhCccCCCCCCCHHHHHc
Q 048594          253 IRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.+||..+|.+||+++++++
T Consensus       237 i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         237 MLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             HHHHcccCcccCCCHHHHHH
Confidence            99999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.4e-33  Score=295.16  Aligned_cols=229  Identities=24%  Similarity=0.351  Sum_probs=166.5

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCC-CEEEEE------------------EeccCC-------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTG-LQFACK------------------SISKTS-------------------   86 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~~avK------------------~~~~~~-------------------   86 (483)
                      ..+.++|.+++.||+|+||+||+|..+... ...+.|                  .+....                   
T Consensus       144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp  223 (501)
T PHA03210        144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE  223 (501)
T ss_pred             hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence            456789999999999999999998765332 111111                  111100                   


Q ss_pred             ----------CCCcCeEEEeccCCCChHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee
Q 048594           87 ----------KSDEGYLKREHCDGGTLVDRISDR-----ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT  151 (483)
Q Consensus        87 ----------~~~~~~lv~E~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~  151 (483)
                                ..+..|+|++++.+ +|.+++...     .......++.++.||+.||.|||++||+||||||+|||+  
T Consensus       224 nIv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl--  300 (501)
T PHA03210        224 NILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL--  300 (501)
T ss_pred             CcCcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE--
Confidence                      01112899999865 788877543     234467788999999999999999999999999999999  


Q ss_pred             CCCCCcEEEeecccceeccCCce--ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC---hHHH
Q 048594          152 DDENATLKATDFGLAFFFEEGKV--YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES---LYGT  226 (483)
Q Consensus       152 ~~~~~~ikl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~---~~~~  226 (483)
                       +..+.+||+|||++..+.....  .....||+.|+|||++.+..++.++|||||||++|+|++|..++.+..   ....
T Consensus       301 -~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~  379 (501)
T PHA03210        301 -NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ  379 (501)
T ss_pred             -CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence             6678899999999987654322  223579999999999998889999999999999999999886543322   1222


Q ss_pred             HHHHHccc----cCCCCC------------------C------CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          227 LTAIMSRE----IDFKSD------------------P------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       227 ~~~i~~~~----~~~~~~------------------~------~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +..+....    ..++..                  .      ...++..+.++|.+||++||.+|||+.|+|.||||.
T Consensus       380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~  458 (501)
T PHA03210        380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFS  458 (501)
T ss_pred             HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhh
Confidence            22221110    000000                  0      013566788899999999999999999999999997

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.1e-33  Score=281.20  Aligned_cols=220  Identities=18%  Similarity=0.277  Sum_probs=170.5

Q ss_pred             eeeccc--CceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEeccCC
Q 048594           55 EELCRG--ESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G--~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E~~~g  100 (483)
                      ..||+|  ++|+||++.+..+|+.||+|++.......                                ..|+|+||+.+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            456666  99999999999999999999987543111                                11899999999


Q ss_pred             CChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-e---
Q 048594          101 GTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-V---  174 (483)
Q Consensus       101 ~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~---  174 (483)
                      ++|.+++.+.  ..+++..+..++.||+.||+|||+++++||||||+||++   +..+.++++||+.+....... .   
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill---~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILI---SGDGLVSLSGLSHLYSLVRNGQKAKV  160 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---eCCCcEEEechHHHhhhhccCccccc
Confidence            9999998764  358999999999999999999999999999999999999   456789999998654332111 0   


Q ss_pred             ----ecccccCCcccCccccCCC--CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC----------
Q 048594          175 ----YEEVVGTPLYMAPELLGPC--KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK----------  238 (483)
Q Consensus       175 ----~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~----------  238 (483)
                          .....++..|+|||++.+.  .++.++|+||+||++|+|++|.+||...........+.......+          
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (328)
T cd08226         161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE  240 (328)
T ss_pred             cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence                0112345679999998763  468899999999999999999999987665544433332211100          


Q ss_pred             ---------------------------------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          239 ---------------------------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       239 ---------------------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                                       .+.....++.+.+||.+||+.||.+|||+.++|+||||+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~  312 (328)
T cd08226         241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFK  312 (328)
T ss_pred             hhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHH
Confidence                                             001123567899999999999999999999999999997

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=4.4e-33  Score=273.50  Aligned_cols=221  Identities=22%  Similarity=0.317  Sum_probs=177.9

Q ss_pred             cccceEEeeeecccCceeEEEEEE-----CCCCCEEEEEEeccCCCC--------------------------------C
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTE-----NSTGLQFACKSISKTSKS--------------------------------D   89 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~~avK~~~~~~~~--------------------------------~   89 (483)
                      ..++|.+.+.||+|+||.||++.+     ..++..+|+|.+......                                .
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  112 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG  112 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence            346899999999999999999975     335668999988754211                                0


Q ss_pred             cCeEEEeccCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           90 EGYLKREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                      ..|+|+||+.+++|.+++....  .+++..+..++.||+.||.|||+++++|+||||+||++   +.++.++|+|||.+.
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~dfg~~~  189 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL---THGKIVKICDFGLAR  189 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEE---cCCCeEEECCCcccc
Confidence            1189999999999999997643  38999999999999999999999999999999999999   567789999999987


Q ss_pred             eccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCC
Q 048594          168 FFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       168 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  243 (483)
                      .......   .....+++.|+|||.+.+..++.++||||+||++|+|++ |..||....................  ...
T Consensus       190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~  267 (302)
T cd05055         190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMA--QPE  267 (302)
T ss_pred             cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCC--CCC
Confidence            6543221   112345678999999988888999999999999999998 9999987665554444433322221  224


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ..++++.+++.+||.++|.+|||+.+++.
T Consensus       268 ~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         268 HAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             CCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            57899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=3e-33  Score=284.26  Aligned_cols=220  Identities=21%  Similarity=0.284  Sum_probs=174.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCC-----CCEEEEEEeccCCCC--------------------------------Cc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENST-----GLQFACKSISKTSKS--------------------------------DE   90 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~avK~~~~~~~~--------------------------------~~   90 (483)
                      .++|.+.+.||+|+||.||+|.+...     +..||+|++......                                ..
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            56899999999999999999987533     347999999754311                                11


Q ss_pred             CeEEEeccCCCChHHHHhcC------------------------------------------------------------
Q 048594           91 GYLKREHCDGGTLVDRISDR------------------------------------------------------------  110 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~------------------------------------------------------------  110 (483)
                      .|+|||||++|+|.+++..+                                                            
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK  195 (400)
T ss_pred             eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence            19999999999999988642                                                            


Q ss_pred             ------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCC
Q 048594          111 ------------------------------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE  154 (483)
Q Consensus       111 ------------------------------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~  154 (483)
                                                          ..+++..+..++.||+.||.|||+.+|+|+||||+||++   +.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill---~~  272 (400)
T cd05105         196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL---AQ  272 (400)
T ss_pred             hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE---eC
Confidence                                                237788889999999999999999999999999999999   56


Q ss_pred             CCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHH
Q 048594          155 NATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAI  230 (483)
Q Consensus       155 ~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i  230 (483)
                      ++.+||+|||++........   .....+++.|+|||.+.+..++.++|||||||++|+|++ |..||............
T Consensus       273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~  352 (400)
T cd05105         273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNK  352 (400)
T ss_pred             CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHH
Confidence            67899999999876543221   122346678999999988889999999999999999997 99999775443333332


Q ss_pred             HccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          231 MSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .......+  ....++..+.+++.+||+.+|++|||+.++.+
T Consensus       353 ~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         353 IKSGYRMA--KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             HhcCCCCC--CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            32222222  22467899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.5e-33  Score=273.83  Aligned_cols=217  Identities=18%  Similarity=0.239  Sum_probs=178.6

Q ss_pred             ceEEeeeecccCceeEEEEEECCC-----CCEEEEEEeccCCCC-------------------------------CcCeE
Q 048594           50 HFTIAEELCRGESGRIYLCTENST-----GLQFACKSISKTSKS-------------------------------DEGYL   93 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~avK~~~~~~~~-------------------------------~~~~l   93 (483)
                      +|.+.+.||.|+||.||+|.+..+     +..+|+|++......                               ...++
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            578899999999999999987543     578999999754311                               11178


Q ss_pred             EEeccCCCChHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCc
Q 048594           94 KREHCDGGTLVDRISDR----------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENAT  157 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~  157 (483)
                      ++||+.+++|.+++...                ..+++..+..++.|++.||.|||++|++||||||+||++   ...+.
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~---~~~~~  162 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV---FDKLN  162 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe---cCCCc
Confidence            99999999999998532                358888999999999999999999999999999999999   56678


Q ss_pred             EEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHcc
Q 048594          158 LKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSR  233 (483)
Q Consensus       158 ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~  233 (483)
                      +||+|||++........   .....+++.|+|||.+.+..++.++||||+||++|+|++ |..||.+....+....+...
T Consensus       163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~  242 (283)
T cd05091         163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNR  242 (283)
T ss_pred             eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            99999999876543221   122345678999999988789999999999999999998 88999888777777777765


Q ss_pred             ccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          234 EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .....   ....+..+.+++.+||+.+|.+||++.+++.
T Consensus       243 ~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~  278 (283)
T cd05091         243 QVLPC---PDDCPAWVYTLMLECWNEFPSRRPRFKDIHS  278 (283)
T ss_pred             CcCCC---CCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            54321   2467899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=5.4e-33  Score=273.02  Aligned_cols=221  Identities=20%  Similarity=0.275  Sum_probs=179.3

Q ss_pred             cccceEEeeeecccCceeEEEEEEC-------CCCCEEEEEEeccCCCC-------------------------------
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTEN-------STGLQFACKSISKTSKS-------------------------------   88 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~~avK~~~~~~~~-------------------------------   88 (483)
                      -.++|.+.+.||+|+||.||+|.+.       ..+..+|+|.+......                               
T Consensus        13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   92 (304)
T cd05101          13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   92 (304)
T ss_pred             cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence            3568999999999999999999752       23457999998653211                               


Q ss_pred             -CcCeEEEeccCCCChHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee
Q 048594           89 -DEGYLKREHCDGGTLVDRISDR----------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT  151 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~  151 (483)
                       ...|+||||+.+++|.+++...                ..+++..+..++.||+.||.|||++|++||||||+||++  
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili--  170 (304)
T cd05101          93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV--  170 (304)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE--
Confidence             0118999999999999999764                247788899999999999999999999999999999999  


Q ss_pred             CCCCCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHH
Q 048594          152 DDENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTL  227 (483)
Q Consensus       152 ~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~  227 (483)
                       +.++.+||+|||.+........   .....+++.|+|||++.+..++.++||||||+++|+|++ |..||.+.......
T Consensus       171 -~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~  249 (304)
T cd05101         171 -TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF  249 (304)
T ss_pred             -cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence             5677899999999987643221   122345678999999988789999999999999999998 88999888777777


Q ss_pred             HHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          228 TAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       228 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ..+.......   .....+.++.++|.+||..+|.+|||+.++++.
T Consensus       250 ~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         250 KLLKEGHRMD---KPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             HHHHcCCcCC---CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            7665443211   124678999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=5.9e-33  Score=265.25  Aligned_cols=215  Identities=22%  Similarity=0.336  Sum_probs=180.6

Q ss_pred             EEeeeecccCceeEEEEEECCCC----CEEEEEEeccCCCCC-------------------------------cCeEEEe
Q 048594           52 TIAEELCRGESGRIYLCTENSTG----LQFACKSISKTSKSD-------------------------------EGYLKRE   96 (483)
Q Consensus        52 ~~~~~lg~G~~g~V~~~~~~~~~----~~~avK~~~~~~~~~-------------------------------~~~lv~E   96 (483)
                      .+.+.||+|+||.||+|.+..++    ..+|+|.+.......                               ..|++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            56789999999999999998776    899999997654211                               1189999


Q ss_pred             ccCCCChHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           97 HCDGGTLVDRISDRER--YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~--l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      |+++++|.+++.....  +++..+..++.||+.||.+||+.+++|+||+|+||++   +..+.++|+|||.+........
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~  158 (258)
T smart00219       82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYDDDY  158 (258)
T ss_pred             ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE---ccCCeEEEcccCCceecccccc
Confidence            9999999999976544  9999999999999999999999999999999999999   5667999999999987654322


Q ss_pred             ec--ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          175 YE--EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       175 ~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      ..  ...+++.|+|||.+....++.++|+||+|+++++|++ |.+||...+.......+.......   .....+.++.+
T Consensus       159 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  235 (258)
T smart00219      159 YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLP---KPENCPPEIYK  235 (258)
T ss_pred             cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCC---CCCcCCHHHHH
Confidence            22  1236788999999987788999999999999999998 889998877777777766554322   12357899999


Q ss_pred             HHHHhCccCCCCCCCHHHHHc
Q 048594          252 LIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ++.+||..+|.+|||+.++++
T Consensus       236 ~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      236 LMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HHHHHCcCChhhCcCHHHHHh
Confidence            999999999999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=3.6e-33  Score=271.26  Aligned_cols=219  Identities=21%  Similarity=0.286  Sum_probs=171.0

Q ss_pred             ccce-EEeeeecccCceeEEEEE----ECCCCCEEEEEEeccCCCC---------------------------------C
Q 048594           48 KLHF-TIAEELCRGESGRIYLCT----ENSTGLQFACKSISKTSKS---------------------------------D   89 (483)
Q Consensus        48 ~~~y-~~~~~lg~G~~g~V~~~~----~~~~~~~~avK~~~~~~~~---------------------------------~   89 (483)
                      .++| .+++.||+|+||+||++.    ...++..+|+|++......                                 .
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   81 (283)
T cd05080           2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK   81 (283)
T ss_pred             ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence            4566 999999999999998865    3457889999998754210                                 0


Q ss_pred             cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           90 EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ..|+||||+.+++|.+++... .+++..+..++.|++.||.|||+++++|+||||+||++   +.++.++|+|||.+...
T Consensus        82 ~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~  157 (283)
T cd05080          82 GLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAV  157 (283)
T ss_pred             eEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEE---cCCCcEEEeeccccccc
Confidence            118999999999999999764 69999999999999999999999999999999999999   56678999999998876


Q ss_pred             cCCce----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH--HH------------HHHHH
Q 048594          170 EEGKV----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY--GT------------LTAIM  231 (483)
Q Consensus       170 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~--~~------------~~~i~  231 (483)
                      .....    .....++..|+|||.+.+..++.++||||||+++|+|++|..||......  ..            +....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd05080         158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELL  237 (283)
T ss_pred             CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhh
Confidence            43321    11224566799999998878899999999999999999999998543211  00            00011


Q ss_pred             ccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ......  +.....+.++.+++.+||..+|++|||+++++.
T Consensus       238 ~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         238 ERGMRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             hcCCCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            111111  112457899999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.7e-33  Score=265.17  Aligned_cols=214  Identities=22%  Similarity=0.326  Sum_probs=179.4

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-----------------------------CCcCeEEEeccC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-----------------------------SDEGYLKREHCD   99 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----------------------------~~~~~lv~E~~~   99 (483)
                      ++|.+.+.||.|++|.||+|...  |+.+|+|.+.....                             ....|+|+||+.
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            47899999999999999999876  88999999976643                             011189999999


Q ss_pred             CCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecc
Q 048594          100 GGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE  177 (483)
Q Consensus       100 g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~  177 (483)
                      +++|.+++....  .+++..+..++.|++.||.|||+++++|+||+|+||++   +.++.++|+|||.+........  .
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili---~~~~~~~l~d~g~~~~~~~~~~--~  158 (256)
T cd05039          84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLAKEASQGQD--S  158 (256)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE---eCCCCEEEcccccccccccccc--c
Confidence            999999998765  79999999999999999999999999999999999999   5678899999999987643222  2


Q ss_pred             cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHh
Q 048594          178 VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM  256 (483)
Q Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  256 (483)
                      ..++..|+|||.+....++.++|+||+|++++++++ |..||...........+.....   .......++.+.++|.+|
T Consensus       159 ~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~  235 (256)
T cd05039         159 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR---MEAPEGCPPEVYKVMKDC  235 (256)
T ss_pred             CCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC---CCCccCCCHHHHHHHHHH
Confidence            344567999999988788999999999999999997 9999988776666665554321   112245789999999999


Q ss_pred             CccCCCCCCCHHHHHc
Q 048594          257 LIRDPNNQITVAQILK  272 (483)
Q Consensus       257 L~~dP~~R~t~~e~L~  272 (483)
                      |..+|.+|||+.+++.
T Consensus       236 l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         236 WELDPAKRPTFKQLRE  251 (256)
T ss_pred             hccChhhCcCHHHHHH
Confidence            9999999999999976

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=6.4e-33  Score=267.40  Aligned_cols=218  Identities=22%  Similarity=0.354  Sum_probs=178.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCC---EEEEEEeccCCCC-------------------------------CcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGL---QFACKSISKTSKS-------------------------------DEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~avK~~~~~~~~-------------------------------~~~~lv   94 (483)
                      .+|++.+.||+|+||.||+|.++.++.   .||+|.+......                               ...|+|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            468999999999999999999987765   5999998754211                               111999


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      +||+.+++|.+++... +.+++..+..++.|++.||.|||++|++|+||+|+||++   +.++.++|+|||.+.......
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~~~  160 (269)
T cd05065          84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEDDT  160 (269)
T ss_pred             EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE---cCCCcEEECCCccccccccCc
Confidence            9999999999998764 568999999999999999999999999999999999999   567789999999987654322


Q ss_pred             ee---cccc---cCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          174 VY---EEVV---GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       174 ~~---~~~~---gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ..   ....   .+..|+|||.+.+..++.++||||+||++|++++ |..||...........+... .  ..+..+..+
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-~--~~~~~~~~~  237 (269)
T cd05065         161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-Y--RLPPPMDCP  237 (269)
T ss_pred             cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-C--cCCCcccCC
Confidence            11   1111   2346999999988889999999999999999886 99999888777777766433 2  222235678


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ..+.+++.+||..+|.+||++.+++.
T Consensus       238 ~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         238 TALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=4e-33  Score=270.64  Aligned_cols=218  Identities=20%  Similarity=0.301  Sum_probs=177.8

Q ss_pred             cceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCC------------------------------CCcCeE
Q 048594           49 LHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSK------------------------------SDEGYL   93 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~------------------------------~~~~~l   93 (483)
                      .+|.+.+.||+|+||.||+|...     .++..+|+|.+.....                              ....|+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            57888999999999999999743     3567899998765321                              111299


Q ss_pred             EEeccCCCChHHHHhcCC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           94 KREHCDGGTLVDRISDRE---------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~---------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                      ++||+.+++|.+++...+               .+++..+..++.||+.||+|||+.+++|+||||+||++   +..+.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~---~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLV---GQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEE---cCCCCE
Confidence            999999999999987642               48899999999999999999999999999999999999   567789


Q ss_pred             EEeecccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccc
Q 048594          159 KATDFGLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSRE  234 (483)
Q Consensus       159 kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~  234 (483)
                      +|+|||++.........   ....+++.|+|||.+.+..++.++|+|||||++|+|++ |.+||...........+....
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  241 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGR  241 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCc
Confidence            99999998765332211   12234678999999988889999999999999999998 999998777777666665543


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          235 IDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       235 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ..   .....+++.+.++|.+||+.||.+||++.+++.
T Consensus       242 ~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         242 EL---ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             cC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            22   112467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=6.7e-33  Score=267.04  Aligned_cols=218  Identities=21%  Similarity=0.331  Sum_probs=178.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCC---EEEEEEeccCCCC-------------------------------CcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGL---QFACKSISKTSKS-------------------------------DEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~avK~~~~~~~~-------------------------------~~~~lv   94 (483)
                      .+|++.+.||+|+||.||+|.++.++.   .+|+|.+......                               +..|+|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            579999999999999999999875543   7999998653211                               111999


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |||++|++|.+++... +.+++..+..++.||+.||.|||+++++|+||||+||++   +.++.++|+|||.+.......
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDP  160 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE---CCCCeEEeCCCCccccccccc
Confidence            9999999999999765 568999999999999999999999999999999999999   567789999999988664322


Q ss_pred             ee----cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          174 VY----EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       174 ~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      ..    ....++..|+|||.+.+..++.++|+||+|+++|++++ |..||......+....+.... ..  +.....++.
T Consensus       161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~  237 (267)
T cd05066         161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY-RL--PAPMDCPAA  237 (267)
T ss_pred             ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC-cC--CCCCCCCHH
Confidence            11    11223567999999988889999999999999999886 999998877767777666542 21  222457899


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHc
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.+++.+||+++|.+|||+.++++
T Consensus       238 ~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         238 LHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHHHHHHcccCchhCCCHHHHHH
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=9.4e-33  Score=266.01  Aligned_cols=218  Identities=20%  Similarity=0.324  Sum_probs=179.2

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCC---EEEEEEeccCCCC-------------------------------CcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGL---QFACKSISKTSKS-------------------------------DEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~avK~~~~~~~~-------------------------------~~~~lv   94 (483)
                      ++|+..+.||+|++|.||+|..+.++.   .+|+|.+......                               +..|+|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            578899999999999999999887665   7999998654211                               111899


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |||+.+++|.+++... +.+++..+..++.|++.||+|||+.+++|+||||+||++   +.++.++|+|||++.......
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~~~~  161 (268)
T cd05063          85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV---NSNLECKVSDFGLSRVLEDDP  161 (268)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEE---cCCCcEEECCCccceeccccc
Confidence            9999999999999764 678999999999999999999999999999999999999   567789999999987664322


Q ss_pred             ee--c--ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          174 VY--E--EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       174 ~~--~--~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      ..  .  ....++.|+|||.+....++.++|+||+||++|++++ |..||...........+.... .  .+.....+..
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~-~--~~~~~~~~~~  238 (268)
T cd05063         162 EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF-R--LPAPMDCPSA  238 (268)
T ss_pred             ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-C--CCCCCCCCHH
Confidence            11  1  1123456999999988788999999999999999997 999998887777777776542 1  1222357889


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHc
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.+++.+||..+|.+||++.++++
T Consensus       239 ~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         239 VYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHH
Confidence            999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1.1e-32  Score=263.64  Aligned_cols=218  Identities=22%  Similarity=0.359  Sum_probs=179.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------cCeEEEeccC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------EGYLKREHCD   99 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~lv~E~~~   99 (483)
                      .+|++.+.||+|++|.||+|.+. .+..+|+|.+.......                             ..|+|+||+.
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            36899999999999999999886 46789999987543211                             1189999999


Q ss_pred             CCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce--ec
Q 048594          100 GGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV--YE  176 (483)
Q Consensus       100 g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~--~~  176 (483)
                      +++|.+++... +.+++..+..++.|++.+|.|||+.+++|+||+|+||++   +.++.++|+|||.+........  ..
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (256)
T cd05112          83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLV---GENQVVKVSDFGMTRFVLDDQYTSST  159 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEE---cCCCeEEECCCcceeecccCcccccC
Confidence            99999998764 568999999999999999999999999999999999999   5677899999999876533221  11


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ...++..|+|||.+.+..++.++|+||+|+++|+|++ |..||...........+..+...+.+   ...+..+.+|+.+
T Consensus       160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~  236 (256)
T cd05112         160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKP---RLASQSVYELMQH  236 (256)
T ss_pred             CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCC---CCCCHHHHHHHHH
Confidence            2234567999999988888999999999999999998 99999887777777776554222211   2467899999999


Q ss_pred             hCccCCCCCCCHHHHHcC
Q 048594          256 MLIRDPNNQITVAQILKH  273 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h  273 (483)
                      ||+.+|.+|||+.+++++
T Consensus       237 ~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         237 CWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             HcccChhhCCCHHHHHHh
Confidence            999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=8.7e-33  Score=272.91  Aligned_cols=219  Identities=20%  Similarity=0.282  Sum_probs=177.4

Q ss_pred             ccceEEeeeecccCceeEEEEEECC-------CCCEEEEEEeccCCCC--------------------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENS-------TGLQFACKSISKTSKS--------------------------------   88 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~~avK~~~~~~~~--------------------------------   88 (483)
                      ..+|.+.+.||+|+||.||+|.+..       .+..+|+|.+......                                
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            4689999999999999999998642       3457999998753211                                


Q ss_pred             CcCeEEEeccCCCChHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC
Q 048594           89 DEGYLKREHCDGGTLVDRISDR----------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD  152 (483)
Q Consensus        89 ~~~~lv~E~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~  152 (483)
                      ...|+|+||+.+++|.+++...                ..+++..+..++.||+.||.|||++|++|+||||+||++   
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill---  167 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV---  167 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE---
Confidence            0118999999999999999653                348889999999999999999999999999999999999   


Q ss_pred             CCCCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHH
Q 048594          153 DENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLT  228 (483)
Q Consensus       153 ~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~  228 (483)
                      +.++.+||+|||.++.......   .....+++.|+|||.+.+..++.++|+||+|+++|+|++ |..||.+........
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~  247 (314)
T cd05099         168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK  247 (314)
T ss_pred             cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            5667899999999976543211   112234567999999988888999999999999999999 899998877777776


Q ss_pred             HHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          229 AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       229 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+......   ......+.++.++|.+||..+|.+|||+.+++.
T Consensus       248 ~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         248 LLREGHRM---DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             HHHcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            66554321   112467889999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=1.1e-32  Score=265.92  Aligned_cols=219  Identities=19%  Similarity=0.278  Sum_probs=179.6

Q ss_pred             ccceEEeeeecccCceeEEEEEECCC---CCEEEEEEeccCCCC------------------------------CcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENST---GLQFACKSISKTSKS------------------------------DEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~avK~~~~~~~~------------------------------~~~~lv   94 (483)
                      .++|.+.+.||.|++|.||+|.+...   ...+|+|........                              ...|+|
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv   84 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIV   84 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEE
Confidence            35699999999999999999987644   357999988654311                              111899


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |||+++++|.+++... ..+++..+..++.||+.||.|||+.+++|+||+|+||++   +.++.++|+|||.+.......
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~  161 (270)
T cd05056          85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV---SSPDCVKLGDFGLSRYLEDES  161 (270)
T ss_pred             EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEE---ecCCCeEEccCceeeeccccc
Confidence            9999999999999764 358999999999999999999999999999999999999   566789999999988764432


Q ss_pred             eec--ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          174 VYE--EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       174 ~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      ...  ...+++.|+|||.+....++.++|+||||+++|++++ |..||.+....+....+......   ...+.++.++.
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  238 (270)
T cd05056         162 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL---PMPPNCPPTLY  238 (270)
T ss_pred             ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC---CCCCCCCHHHH
Confidence            221  2234567999999988788999999999999999986 99999888777766666554322   12356789999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHc
Q 048594          251 DLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ++|.+||..+|.+|||+.+++.
T Consensus       239 ~li~~~l~~~P~~Rpt~~~~~~  260 (270)
T cd05056         239 SLMTKCWAYDPSKRPRFTELKA  260 (270)
T ss_pred             HHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999876

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=6.3e-33  Score=265.15  Aligned_cols=214  Identities=23%  Similarity=0.319  Sum_probs=177.9

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------CCcCeEEEeccCCC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------SDEGYLKREHCDGG  101 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------~~~~~lv~E~~~g~  101 (483)
                      ++|++.+.||+|+||.||++..  +++.+|+|.+.....                           .+..|+|+||+.++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~   83 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKG   83 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCC
Confidence            4699999999999999999864  688999999865421                           11128999999999


Q ss_pred             ChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccc
Q 048594          102 TLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV  179 (483)
Q Consensus       102 ~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~  179 (483)
                      +|.+++....  .+++..+..++.|++.||.|||+.|++||||+|+||++   +.++.++|+|||.+......  .....
T Consensus        84 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili---~~~~~~kl~Dfg~~~~~~~~--~~~~~  158 (254)
T cd05083          84 NLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILV---SEDGVAKVSDFGLARVGSMG--VDNSK  158 (254)
T ss_pred             CHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCcEEECCCccceecccc--CCCCC
Confidence            9999997643  58999999999999999999999999999999999999   56778999999998764322  12233


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI  258 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  258 (483)
                      .+..|+|||.+.+..++.++|+||+|+++|+|++ |.+||...........+.... .  ..+.+.++..+.+++.+||+
T Consensus       159 ~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~li~~~l~  235 (254)
T cd05083         159 LPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY-R--MEPPEGCPADVYVLMTSCWE  235 (254)
T ss_pred             CCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC-C--CCCCCcCCHHHHHHHHHHcC
Confidence            4567999999988788999999999999999997 999998887777666665542 1  12235678999999999999


Q ss_pred             cCCCCCCCHHHHHc
Q 048594          259 RDPNNQITVAQILK  272 (483)
Q Consensus       259 ~dP~~R~t~~e~L~  272 (483)
                      .+|.+||++++++.
T Consensus       236 ~~p~~Rp~~~~l~~  249 (254)
T cd05083         236 TEPKKRPSFHKLRE  249 (254)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-34  Score=276.60  Aligned_cols=231  Identities=28%  Similarity=0.429  Sum_probs=192.9

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------------   89 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------------   89 (483)
                      -.+.++|-++..||+|+|+.||+|.+..-++.+|||+-.....+.                                   
T Consensus       459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl  538 (775)
T KOG1151|consen  459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL  538 (775)
T ss_pred             cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence            346789999999999999999999999999999999865433111                                   


Q ss_pred             ---cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           90 ---EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        90 ---~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                         ..|-|+|||+|.+|.-+|++++.++|.+++.|+.||+.||.||....  |+|-||||.|||+.+....|.|||+|||
T Consensus       539 DtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG  618 (775)
T KOG1151|consen  539 DTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG  618 (775)
T ss_pred             ccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence               11889999999999999999999999999999999999999999775  9999999999999887788999999999


Q ss_pred             cceeccCCc--------eecccccCCcccCccccCC----CCCCCcCchHHHHHHHHHHhhCCCCCCCCChH-HHH--HH
Q 048594          165 LAFFFEEGK--------VYEEVVGTPLYMAPELLGP----CKYGKEIDIWSAGLILYNLLSGAQPFWAESLY-GTL--TA  229 (483)
Q Consensus       165 ~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~-~~~--~~  229 (483)
                      ++.++....        ......||.||+|||.+.-    .+.+.++||||+|||+|+++.|+.||...... ..+  ..
T Consensus       619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNT  698 (775)
T KOG1151|consen  619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENT  698 (775)
T ss_pred             hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhc
Confidence            999876432        2345689999999998742    34688999999999999999999999654322 222  22


Q ss_pred             HHc-cccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          230 IMS-REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       230 i~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      |.+ ..+.||+  -|.+++++++||.+||+..-+.|..+.++-.||||.
T Consensus       699 IlkAtEVqFP~--KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyll  745 (775)
T KOG1151|consen  699 ILKATEVQFPP--KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLL  745 (775)
T ss_pred             hhcceeccCCC--CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCcccc
Confidence            222 3344544  367999999999999999999999999999999997

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=1.6e-32  Score=263.43  Aligned_cols=220  Identities=20%  Similarity=0.283  Sum_probs=180.4

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------CcCeEEEec
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------DEGYLKREH   97 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------~~~~lv~E~   97 (483)
                      ...++|.+.+.||+|+||.||++..+ .+..+|+|.+......                            ...|+++||
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~   81 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEF   81 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEe
Confidence            34678999999999999999999865 4567999988754311                            111899999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      +++++|.+++...  ..+++..+..++.||+.||.|||+.+++|+||+|+||++   +..+.++|+|||.+.........
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~  158 (260)
T cd05073          82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNEYT  158 (260)
T ss_pred             CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCCcceeeccCCCcc
Confidence            9999999999763  457888999999999999999999999999999999999   66789999999998766433211


Q ss_pred             --cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          176 --EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       176 --~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                        ....++..|+|||.+....++.++|+||+||++|++++ |..||.+.+.......+.....   .+..+..+.++.++
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  235 (260)
T cd05073         159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR---MPRPENCPEELYNI  235 (260)
T ss_pred             cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC---CCCcccCCHHHHHH
Confidence              12334567999999988788999999999999999998 9999988777776666654422   12235678999999


Q ss_pred             HHHhCccCCCCCCCHHHHHc
Q 048594          253 IRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.+||+++|.+||++.+++.
T Consensus       236 i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         236 MMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             HHHHcccCcccCcCHHHHHH
Confidence            99999999999999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=6.7e-33  Score=270.06  Aligned_cols=219  Identities=19%  Similarity=0.271  Sum_probs=179.4

Q ss_pred             ccceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCC-------------------------------CCcC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSK-------------------------------SDEG   91 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~-------------------------------~~~~   91 (483)
                      .++|++.+.||+|+||.||+|.++     .++..+|+|.+.....                               ....
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            357999999999999999999875     3678999999875421                               0112


Q ss_pred             eEEEeccCCCChHHHHhcC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEE
Q 048594           92 YLKREHCDGGTLVDRISDR----------------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF  149 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~----------------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll  149 (483)
                      |+|+||+++++|.+++...                      ..+++..+..++.||+.||.|||+++++||||+|+||++
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~  163 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLV  163 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEe
Confidence            9999999999999999643                      247888899999999999999999999999999999999


Q ss_pred             eeCCCCCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHH
Q 048594          150 TTDDENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYG  225 (483)
Q Consensus       150 ~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~  225 (483)
                         +..+.++|+|||.+........   ......++.|+|||.+.+..++.++|+|||||++|+|++ |..||.+....+
T Consensus       164 ---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~  240 (288)
T cd05050         164 ---GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE  240 (288)
T ss_pred             ---cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence               5678899999999876532221   112234667999999988889999999999999999997 889998877777


Q ss_pred             HHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          226 TLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       226 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ....+..+....   .....+.++.+||.+||+.+|.+|||+.|+++
T Consensus       241 ~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         241 VIYYVRDGNVLS---CPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HHHHHhcCCCCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            777766554321   12357899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.1e-32  Score=264.12  Aligned_cols=211  Identities=19%  Similarity=0.270  Sum_probs=171.5

Q ss_pred             eecccCceeEEEEEEC--CCCCEEEEEEeccCCCC------------------------------CcCeEEEeccCCCCh
Q 048594           56 ELCRGESGRIYLCTEN--STGLQFACKSISKTSKS------------------------------DEGYLKREHCDGGTL  103 (483)
Q Consensus        56 ~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~------------------------------~~~~lv~E~~~g~~L  103 (483)
                      .||+|+||.||+|..+  .++..+|+|++......                              ...|+|+||+++++|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L   81 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL   81 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence            3899999999999765  44567999998765321                              111899999999999


Q ss_pred             HHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee----ccc
Q 048594          104 VDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY----EEV  178 (483)
Q Consensus       104 ~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~----~~~  178 (483)
                      .+++.. ...+++..+..++.||+.||.|||++|++|+||||+||++   +.++.+||+|||.+.........    ...
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05115          82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL---VNQHYAKISDFGLSKALGADDSYYKARSAG  158 (257)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE---cCCCcEEeccCCccccccCCccceeccCCC
Confidence            999975 4579999999999999999999999999999999999999   56778999999998755432211    112


Q ss_pred             ccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhC
Q 048594          179 VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML  257 (483)
Q Consensus       179 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  257 (483)
                      .+++.|+|||.+....++.++|+|||||++|++++ |..||...........+..+...   ...+..++++.++|.+||
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~c~  235 (257)
T cd05115         159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL---DCPAECPPEMYALMKDCW  235 (257)
T ss_pred             CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC---CCCCCCCHHHHHHHHHHc
Confidence            23567999999987788999999999999999996 99999887777666666554321   122467899999999999


Q ss_pred             ccCCCCCCCHHHHHc
Q 048594          258 IRDPNNQITVAQILK  272 (483)
Q Consensus       258 ~~dP~~R~t~~e~L~  272 (483)
                      ..+|.+||++.++.+
T Consensus       236 ~~~~~~Rp~~~~i~~  250 (257)
T cd05115         236 IYKWEDRPNFAKVEE  250 (257)
T ss_pred             CCChhhCcCHHHHHH
Confidence            999999999999865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=3.5e-34  Score=278.97  Aligned_cols=230  Identities=26%  Similarity=0.394  Sum_probs=193.2

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------------
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------------   88 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------------   88 (483)
                      .+.+-.+|.+....|+|-|++|..|.+..-|..||||+|......                                   
T Consensus       427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk  506 (752)
T KOG0670|consen  427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK  506 (752)
T ss_pred             hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc
Confidence            466778999999999999999999999999999999999765311                                   


Q ss_pred             CcCeEEEeccCCCChHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           89 DEGYLKREHCDGGTLVDRISDRE---RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        89 ~~~~lv~E~~~g~~L~~~l~~~~---~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                      ..+|||+|-+.- +|.+.|+.-+   .+....++.++.|++.||..|-..||+|.||||+|||+.  .....+||||||.
T Consensus       507 nHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--E~k~iLKLCDfGS  583 (752)
T KOG0670|consen  507 NHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--ESKNILKLCDFGS  583 (752)
T ss_pred             ceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--cCcceeeeccCcc
Confidence            111999998865 8999998654   488899999999999999999999999999999999995  3456799999999


Q ss_pred             ceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC-----
Q 048594          166 AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD-----  240 (483)
Q Consensus       166 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-----  240 (483)
                      |.....+.. ..+..+..|.|||++.|.+|....|+||+||+||||.||+..|.|.+..+++...+.-.-.||..     
T Consensus       584 A~~~~enei-tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKg  662 (752)
T KOG0670|consen  584 ASFASENEI-TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKG  662 (752)
T ss_pred             ccccccccc-cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhc
Confidence            988766543 34556778999999999999999999999999999999999999999999888776533333211     


Q ss_pred             -----CC---------------------------------------CCCC-------HHHHHHHHHhCccCCCCCCCHHH
Q 048594          241 -----PW---------------------------------------PTIS-------SSAKDLIRRMLIRDPNNQITVAQ  269 (483)
Q Consensus       241 -----~~---------------------------------------~~~~-------~~~~~li~~~L~~dP~~R~t~~e  269 (483)
                           ++                                       +.++       ..+++|+.+||..||.+|+|+.+
T Consensus       663 qF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nq  742 (752)
T KOG0670|consen  663 QFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQ  742 (752)
T ss_pred             chhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHH
Confidence                 00                                       1122       45789999999999999999999


Q ss_pred             HHcCCcCC
Q 048594          270 ILKHPWLN  277 (483)
Q Consensus       270 ~L~h~~~~  277 (483)
                      +|.||||.
T Consensus       743 AL~HpFi~  750 (752)
T KOG0670|consen  743 ALKHPFIT  750 (752)
T ss_pred             HhcCCccc
Confidence            99999997

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.4e-33  Score=270.45  Aligned_cols=221  Identities=22%  Similarity=0.285  Sum_probs=173.2

Q ss_pred             cceEEeeeecccCceeEEEEEECCCC--------------CEEEEEEeccCCCC--------------------------
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTG--------------LQFACKSISKTSKS--------------------------   88 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~--------------~~~avK~~~~~~~~--------------------------   88 (483)
                      ++|.+.+.||+|+||.||+|.+..++              ..+|+|.+......                          
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            58999999999999999999876432              35899998754211                          


Q ss_pred             -----CcCeEEEeccCCCChHHHHhcCC------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee
Q 048594           89 -----DEGYLKREHCDGGTLVDRISDRE------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT  151 (483)
Q Consensus        89 -----~~~~lv~E~~~g~~L~~~l~~~~------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~  151 (483)
                           ...|+|||||.+++|.+++....            .+++..+..++.||+.||.|||+++++|+||||+||++  
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill--  162 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV--  162 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE--
Confidence                 11189999999999999986532            36888999999999999999999999999999999999  


Q ss_pred             CCCCCcEEEeecccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh--CCCCCCCCChHHH
Q 048594          152 DDENATLKATDFGLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS--GAQPFWAESLYGT  226 (483)
Q Consensus       152 ~~~~~~ikl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~--g~~pf~~~~~~~~  226 (483)
                       +.++.+||+|||++.........   ....+++.|+|||.+....++.++|+|||||++|+|++  |..||........
T Consensus       163 -~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~  241 (295)
T cd05097         163 -GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV  241 (295)
T ss_pred             -cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHH
Confidence             56678999999998765432211   12234678999999988889999999999999999988  6788877666555


Q ss_pred             HHHHHcc----ccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          227 LTAIMSR----EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       227 ~~~i~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ...+...    .........+..++.+.+|+.+||..+|.+|||++++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         242 IENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            4443221    010111123457899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-32  Score=266.07  Aligned_cols=212  Identities=22%  Similarity=0.280  Sum_probs=169.5

Q ss_pred             eeecccCceeEEEEEECCCCC--EEEEEEeccCCCC--------------------------------CcCeEEEeccCC
Q 048594           55 EELCRGESGRIYLCTENSTGL--QFACKSISKTSKS--------------------------------DEGYLKREHCDG  100 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~--~~avK~~~~~~~~--------------------------------~~~~lv~E~~~g  100 (483)
                      +.||+|+||.||+|..+.++.  .+|+|.+......                                ...|+||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            368999999999999988876  4688887642110                                011899999999


Q ss_pred             CChHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594          101 GTLVDRISDRE----------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus       101 ~~L~~~l~~~~----------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                      ++|.+++....                .+++..+..++.||+.||+|||+.+++|+||||+||++   +.++.+||+|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili---~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE---cCCCeEEECCCC
Confidence            99999997542                47899999999999999999999999999999999999   677899999999


Q ss_pred             cceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCC
Q 048594          165 LAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  243 (483)
                      ++..............++.|+|||.+....++.++|+|||||++|+|++ |..||.+.+.......+.... .  .....
T Consensus       158 l~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~--~~~~~  234 (270)
T cd05047         158 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-R--LEKPL  234 (270)
T ss_pred             CccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC-C--CCCCC
Confidence            9864321111112233567999999988788999999999999999997 999998877666666554432 1  11223


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ..+.++.+++.+||..+|.+|||+.+++.
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         235 NCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             cCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            57889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=1.3e-32  Score=266.76  Aligned_cols=219  Identities=16%  Similarity=0.251  Sum_probs=178.8

Q ss_pred             ccceEEeeeecccCceeEEEEEECC----CCCEEEEEEeccCCC--------------------------------CCcC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENS----TGLQFACKSISKTSK--------------------------------SDEG   91 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~~avK~~~~~~~--------------------------------~~~~   91 (483)
                      .++|.+.+.||+|+||.||+|.+..    ++..+|+|.+.....                                ....
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            4689999999999999999999876    358899998864321                                0112


Q ss_pred             eEEEeccCCCChHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeec
Q 048594           92 YLKREHCDGGTLVDRISDR--------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF  163 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~--------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Df  163 (483)
                      ++++||+.+++|.+++...        ..+++..+..++.||+.||.|||+++++|+||+|+||++   +..+.+||+||
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kl~d~  161 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVI---DEELQVKITDN  161 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEE---cCCCcEEECCC
Confidence            8999999999999998653        458999999999999999999999999999999999999   56689999999


Q ss_pred             ccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCC
Q 048594          164 GLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKS  239 (483)
Q Consensus       164 g~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (483)
                      |+++.+......   ....++..|+|||.+.+..++.++||||+|+++|++++ |.+||...+.......+... .... 
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~-  239 (280)
T cd05043         162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-YRLA-  239 (280)
T ss_pred             CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC-CCCC-
Confidence            999865433211   12345667999999988788999999999999999998 99999887766655555443 2221 


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                       ....+++++.+++.+||..+|++|||+.++++
T Consensus       240 -~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         240 -QPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             -CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence             22457899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=8.5e-33  Score=272.77  Aligned_cols=219  Identities=22%  Similarity=0.303  Sum_probs=167.5

Q ss_pred             eeccc--CceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEeccCCC
Q 048594           56 ELCRG--ESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKREHCDGG  101 (483)
Q Consensus        56 ~lg~G--~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E~~~g~  101 (483)
                      +||+|  ++|.||.++++.+++.+|+|++.......                                ..|+++|||.++
T Consensus         5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (314)
T cd08216           5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG   84 (314)
T ss_pred             hhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence            34444  55677777778899999999987652111                                119999999999


Q ss_pred             ChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc------
Q 048594          102 TLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK------  173 (483)
Q Consensus       102 ~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~------  173 (483)
                      +|.+++...  ..+++..+..++.||+.||.|||+++|+|+||||+||++   +.++.++|+|||.+..+....      
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili---~~~~~~kl~d~~~~~~~~~~~~~~~~~  161 (314)
T cd08216          85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILL---SGDGKVVLSGLRYSVSMIKHGKRQRVV  161 (314)
T ss_pred             CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEE---ecCCceEEecCccceeecccccccccc
Confidence            999999763  468999999999999999999999999999999999999   566789999999886553211      


Q ss_pred             --eecccccCCcccCccccCC--CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCC------------
Q 048594          174 --VYEEVVGTPLYMAPELLGP--CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDF------------  237 (483)
Q Consensus       174 --~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~------------  237 (483)
                        ......++..|+|||++..  ..++.++|+||+||++++|++|..||..............+....            
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (314)
T cd08216         162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED  241 (314)
T ss_pred             ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC
Confidence              1122356778999999865  357889999999999999999999998765443332222111000            


Q ss_pred             ------------------CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          238 ------------------KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       238 ------------------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                        .......++.++.+|+.+||++||++|||+.++|+||||+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~  299 (314)
T cd08216         242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFK  299 (314)
T ss_pred             CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHh
Confidence                              0000012346788999999999999999999999999998

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-32  Score=265.62  Aligned_cols=219  Identities=18%  Similarity=0.237  Sum_probs=179.8

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCC----EEEEEEeccCCCC------------------------------CcCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGL----QFACKSISKTSKS------------------------------DEGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~~avK~~~~~~~~------------------------------~~~~l   93 (483)
                      ..+|.+.+.||+|+||+||+|.++.+|.    .+|+|.+......                              ...++
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQL   85 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEE
Confidence            3579999999999999999999887765    5899988765321                              11189


Q ss_pred             EEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |+||+.+++|.+++.+. ..+++..+..++.||+.||+|||+.+++|+||+|+||++   +..+.++|+|||.+..+...
T Consensus        86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kL~dfg~~~~~~~~  162 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLDVD  162 (279)
T ss_pred             EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE---cCCCeEEECCCcccccccCc
Confidence            99999999999999764 569999999999999999999999999999999999999   56678999999999876533


Q ss_pred             ceec---ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          173 KVYE---EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       173 ~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      ....   ...++..|+|||.+....++.++|+||+|+++|++++ |..||.+....+....+...... +  ..+..+..
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~  239 (279)
T cd05057         163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERL-P--QPPICTID  239 (279)
T ss_pred             ccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCC-C--CCCCCCHH
Confidence            2211   1223567999999987788999999999999999998 99999887777666666544221 1  12356789


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHc
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.+++.+||..+|..|||+.++++
T Consensus       240 ~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         240 VYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHH
Confidence            999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.4e-32  Score=265.90  Aligned_cols=220  Identities=17%  Similarity=0.311  Sum_probs=181.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCC-----CCEEEEEEeccCCCC-------------------------------CcCe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENST-----GLQFACKSISKTSKS-------------------------------DEGY   92 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~avK~~~~~~~~-------------------------------~~~~   92 (483)
                      ++|.+++.||+|+||.||+|..+.+     .+.+|+|.+......                               ...|
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            5789999999999999999997643     467999988654321                               1119


Q ss_pred             EEEeccCCCChHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeec
Q 048594           93 LKREHCDGGTLVDRISDRE---------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF  163 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~---------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Df  163 (483)
                      +|+||+++++|.+++....         .+++..+..++.||+.||+|||+++++|+||||+||++   +..+.++++||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLV---SSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEE---eCCCcEEEccc
Confidence            9999999999999998665         68999999999999999999999999999999999999   56678999999


Q ss_pred             ccceeccCCc--eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCC
Q 048594          164 GLAFFFEEGK--VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSD  240 (483)
Q Consensus       164 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~  240 (483)
                      |++.......  ......+++.|+|||.+.+..++.++||||+|+++|++++ |..||...........+......++. 
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-  240 (275)
T cd05046         162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPV-  240 (275)
T ss_pred             ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCC-
Confidence            9986543221  1223355777999999887778899999999999999998 88999877777777776655544432 


Q ss_pred             CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       241 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                       ...++..+.+++.+||..+|.+|||+.+++..
T Consensus       241 -~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         241 -PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             -CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence             24578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-33  Score=287.86  Aligned_cols=225  Identities=28%  Similarity=0.482  Sum_probs=191.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC-----------------------------------eE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG-----------------------------------YL   93 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------------------------~l   93 (483)
                      .-|.+.++||.|.+|.||+++++++|+..|||+.......++.                                   +|
T Consensus        19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL   98 (953)
T KOG0587|consen   19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL   98 (953)
T ss_pred             CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence            4589999999999999999999999999999998776543332                                   99


Q ss_pred             EEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           94 KREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |||||.||+.-+++++-  .++.|..++.|++.++.|+.+||++.++|||||-.|||+   ..++.|||+|||++..++.
T Consensus        99 VMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL---T~e~~VKLvDFGvSaQlds  175 (953)
T KOG0587|consen   99 VMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDS  175 (953)
T ss_pred             EeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE---eccCcEEEeeeeeeeeeec
Confidence            99999999999998753  679999999999999999999999999999999999999   5788999999999998864


Q ss_pred             Cc-eecccccCCcccCccccCC-----CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCC
Q 048594          172 GK-VYEEVVGTPLYMAPELLGP-----CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       172 ~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      .. ...+.+|||.|||||++..     ..|+..+|+||||++..||.-|.+|+........+-.|-+.++. ....+...
T Consensus       176 T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPP-kLkrp~kW  254 (953)
T KOG0587|consen  176 TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPP-KLKRPKKW  254 (953)
T ss_pred             ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCc-cccchhhH
Confidence            32 3356789999999999853     34778999999999999999999999776655555444433221 11223567


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +.++.+||+.||.+|-.+||+..++|+|||++
T Consensus       255 s~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~  286 (953)
T KOG0587|consen  255 SKKFNDFISTCLVKDYEQRPSTEELLKHPFIT  286 (953)
T ss_pred             HHHHHHHHHHHHhhccccCcchhhhccCCccc
Confidence            89999999999999999999999999999998

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6e-34  Score=284.55  Aligned_cols=221  Identities=22%  Similarity=0.391  Sum_probs=187.3

Q ss_pred             EEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------CcCeEEE
Q 048594           52 TIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------DEGYLKR   95 (483)
Q Consensus        52 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------~~~~lv~   95 (483)
                      +...+||+|+|-+||+|.+..+|..||.--++.....                                    ....+|+
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence            4577899999999999999999999887655433210                                    1117899


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |++..|+|..|+++.++++...+..|++||+.||.|||++.  |+|||||.+||++.  +..|.|||+|+|+|..+....
T Consensus       123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl~r~s~  200 (632)
T KOG0584|consen  123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATLLRKSH  200 (632)
T ss_pred             ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHHhhccc
Confidence            99999999999999999999999999999999999999986  99999999999996  678999999999999876544


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCC-CChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA-ESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      . ...+|||.|||||.... .|+..+||||||++++||+|+..||.. .+..+.++++..+..+-...  .--.+++++|
T Consensus       201 a-ksvIGTPEFMAPEmYEE-~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~--kV~dPevr~f  276 (632)
T KOG0584|consen  201 A-KSVIGTPEFMAPEMYEE-NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALS--KVKDPEVREF  276 (632)
T ss_pred             c-ceeccCccccChHHHhh-hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhh--ccCCHHHHHH
Confidence            3 34789999999999985 899999999999999999999999965 45566777777765432111  1126899999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                      |.+||.. .+.|||+.|+|.||||...
T Consensus       277 IekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  277 IEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             HHHHhcC-chhccCHHHHhhChhhccc
Confidence            9999999 9999999999999999954

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.7e-32  Score=264.30  Aligned_cols=219  Identities=28%  Similarity=0.457  Sum_probs=182.0

Q ss_pred             ceEEeeeecccCceeEEEEEECC-CCCEEEEEEeccCCCC----------------------------------------
Q 048594           50 HFTIAEELCRGESGRIYLCTENS-TGLQFACKSISKTSKS----------------------------------------   88 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~----------------------------------------   88 (483)
                      .|++.+.||+|+||.||+|.++. +++.+|+|.+......                                        
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            37889999999999999999987 6889999987532210                                        


Q ss_pred             -CcCeEEEeccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEee
Q 048594           89 -DEGYLKREHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATD  162 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~D  162 (483)
                       ...|+|+||++|++|.+++..    ...+++..++.++.|++.+|.|||+ .+++|+||+|+||++   +..+.++|+|
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~---~~~~~~~l~d  157 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTITD  157 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE---CCCCcEEEec
Confidence             111999999999999988743    3569999999999999999999996 789999999999999   5677899999


Q ss_pred             cccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCC
Q 048594          163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW  242 (483)
Q Consensus       163 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  242 (483)
                      ||.+.............|+..|+|||.+.+..++.++|+||+|+++|+|++|..||...........+.......  ...
T Consensus       158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~  235 (269)
T cd08528         158 FGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP--LPE  235 (269)
T ss_pred             ccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCc--CCc
Confidence            999987655444445678899999999988888999999999999999999999998877766666665544321  122


Q ss_pred             CCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          243 PTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       243 ~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ...++.+.++|.+||+.||++||++.|+..+
T Consensus       236 ~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         236 GMYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             ccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            3578999999999999999999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=9.1e-33  Score=268.67  Aligned_cols=218  Identities=22%  Similarity=0.309  Sum_probs=171.5

Q ss_pred             ceEEeeeecccCceeEEEEEE----CCCCCEEEEEEeccCCC---------------------------------CCcCe
Q 048594           50 HFTIAEELCRGESGRIYLCTE----NSTGLQFACKSISKTSK---------------------------------SDEGY   92 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~----~~~~~~~avK~~~~~~~---------------------------------~~~~~   92 (483)
                      -|++++.||+|+||.||+|..    +.++..+|+|.+.....                                 ....|
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            478999999999999999974    46788999999864321                                 01228


Q ss_pred             EEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           93 LKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +|+||++|++|.+++... ..+++..+..++.||+.||+|||++|++||||||+||++   +.++.++|+|||.+..+..
T Consensus        85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~---~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKAIET  161 (284)
T ss_pred             EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE---cCCCCEEECCCcccccccc
Confidence            999999999999999764 468999999999999999999999999999999999999   5667899999999886543


Q ss_pred             Cce----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh---------------HHHHHHHHc
Q 048594          172 GKV----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL---------------YGTLTAIMS  232 (483)
Q Consensus       172 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~---------------~~~~~~i~~  232 (483)
                      ...    .....++..|+|||.+.+..++.++|+||+|+++|+|+++..|+.....               ......+..
T Consensus       162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd05079         162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEE  241 (284)
T ss_pred             CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHc
Confidence            221    1234566779999999887889999999999999999998776532110               111111111


Q ss_pred             cccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          233 REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      . ..  .+.+..++..+.+||.+||+.+|.+|||+.+++++
T Consensus       242 ~-~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         242 G-KR--LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             C-cc--CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            1 11  12235688999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=2.5e-33  Score=269.04  Aligned_cols=215  Identities=26%  Similarity=0.406  Sum_probs=173.0

Q ss_pred             EEeeeecccCceeEEEEEEC----CCCCEEEEEEeccCCCC-------------------------------CcCeEEEe
Q 048594           52 TIAEELCRGESGRIYLCTEN----STGLQFACKSISKTSKS-------------------------------DEGYLKRE   96 (483)
Q Consensus        52 ~~~~~lg~G~~g~V~~~~~~----~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E   96 (483)
                      .+.+.||.|+||.||+|..+    ..+..|+||.+......                               ...++|+|
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            46789999999999999988    45678999999553211                               11189999


Q ss_pred             ccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           97 HCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      ||++|+|.++|...  ..+++..+..++.||+.||.|||+++++|++|+|.||++   +.++.+||+|||++........
T Consensus        82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill---~~~~~~Kl~~f~~~~~~~~~~~  158 (259)
T PF07714_consen   82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILL---DSNGQVKLSDFGLSRPISEKSK  158 (259)
T ss_dssp             --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE---ETTTEEEEESTTTGEETTTSSS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccc
Confidence            99999999999886  789999999999999999999999999999999999999   5677999999999987632221


Q ss_pred             ---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          175 ---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       175 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                         .....+...|+|||.+....++.++||||||+++|++++ |..||...+.......+.......   ..+.++..+.
T Consensus       159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  235 (259)
T PF07714_consen  159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP---IPDNCPKDIY  235 (259)
T ss_dssp             EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT---SBTTSBHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce---eccchhHHHH
Confidence               123346678999999988778999999999999999999 789998888777777775544322   2246789999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHc
Q 048594          251 DLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ++|..||..+|.+|||+.++++
T Consensus       236 ~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  236 SLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HHHHHHT-SSGGGS--HHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHh
Confidence            9999999999999999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=2.2e-32  Score=272.42  Aligned_cols=220  Identities=20%  Similarity=0.288  Sum_probs=177.9

Q ss_pred             ccceEEeeeecccCceeEEEEEECCC-------CCEEEEEEeccCCCC--------------------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENST-------GLQFACKSISKTSKS--------------------------------   88 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~~avK~~~~~~~~--------------------------------   88 (483)
                      ..+|.+.+.||+|+||.||+|.+...       +..+|+|.+......                                
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   90 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence            45799999999999999999986432       236899988643211                                


Q ss_pred             CcCeEEEeccCCCChHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC
Q 048594           89 DEGYLKREHCDGGTLVDRISDRE----------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD  152 (483)
Q Consensus        89 ~~~~lv~E~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~  152 (483)
                      ...|+++||+.+++|.+++....                .+++..+..++.||+.||.|||++|++||||||+||++   
T Consensus        91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill---  167 (334)
T cd05100          91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV---  167 (334)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE---
Confidence            01189999999999999997532                47788899999999999999999999999999999999   


Q ss_pred             CCCCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHH
Q 048594          153 DENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLT  228 (483)
Q Consensus       153 ~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~  228 (483)
                      +.++.+||+|||.++.......   .....++..|+|||++.+..++.++||||+|+++|+|++ |..||.+........
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  247 (334)
T cd05100         168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK  247 (334)
T ss_pred             cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            5667899999999986543221   112234567999999988889999999999999999998 899998887777777


Q ss_pred             HHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          229 AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       229 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .+......   ......+.++.++|.+||+.+|.+|||+.+++.+
T Consensus       248 ~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         248 LLKEGHRM---DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             HHHcCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            76554321   1123568899999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=2e-32  Score=268.96  Aligned_cols=219  Identities=18%  Similarity=0.256  Sum_probs=177.3

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCC----EEEEEEeccCCCC------------------------------CcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGL----QFACKSISKTSKS------------------------------DEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~~avK~~~~~~~~------------------------------~~~~lv   94 (483)
                      ++|+..+.||+|+||.||+|.+..+|.    .+|+|.+......                              ...+++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v   86 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV   86 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence            578899999999999999999988876    4688887654311                              011689


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      +||+++|+|.+++... ..+++..+..++.||+.||.|||+++++|+||||+||++   +.++.+||+|||.+.......
T Consensus        87 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill---~~~~~~kL~Dfg~~~~~~~~~  163 (303)
T cd05110          87 TQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV---KSPNHVKITDFGLARLLEGDE  163 (303)
T ss_pred             ehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee---cCCCceEEccccccccccCcc
Confidence            9999999999999765 368999999999999999999999999999999999999   556789999999998654322


Q ss_pred             e---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          174 V---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       174 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      .   .....++..|+|||.+.+..++.++||||+|+++|+|++ |..||.+.........+.... .++  ..+..+..+
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~  240 (303)
T cd05110         164 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-RLP--QPPICTIDV  240 (303)
T ss_pred             cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-CCC--CCCCCCHHH
Confidence            1   122345678999999988888999999999999999997 999998766555444444332 222  224567899


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .+++.+||..+|.+||+++++++.
T Consensus       241 ~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         241 YMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999998774

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=3.9e-32  Score=258.82  Aligned_cols=211  Identities=20%  Similarity=0.292  Sum_probs=172.3

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeEEEeccCCCCh
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYLKREHCDGGTL  103 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E~~~g~~L  103 (483)
                      +.||+|++|.||+|... ++..+|+|.+......                               ...++||||+++++|
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   79 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF   79 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence            46899999999999865 6889999998654311                               111899999999999


Q ss_pred             HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec--cccc
Q 048594          104 VDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE--EVVG  180 (483)
Q Consensus       104 ~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~--~~~g  180 (483)
                      .+++... ..+++..+..++.|++.+|.|||++|++|+||+|+||++   +.++.++|+|||.+..........  ...+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (250)
T cd05085          80 LSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQEDDGIYSSSGLKQI  156 (250)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEE---cCCCeEEECCCccceeccccccccCCCCCC
Confidence            9998754 468999999999999999999999999999999999999   567789999999987644322111  1234


Q ss_pred             CCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCcc
Q 048594          181 TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR  259 (483)
Q Consensus       181 t~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  259 (483)
                      ++.|+|||.+....++.++|+||+|+++|++++ |..||.+.........+.....   ......++..+.+++.+||..
T Consensus       157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~  233 (250)
T cd05085         157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR---MSCPQKCPDDVYKVMQRCWDY  233 (250)
T ss_pred             cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHccc
Confidence            567999999988788999999999999999998 9999988776666666554321   122346789999999999999


Q ss_pred             CCCCCCCHHHHHc
Q 048594          260 DPNNQITVAQILK  272 (483)
Q Consensus       260 dP~~R~t~~e~L~  272 (483)
                      +|.+|||+.++++
T Consensus       234 ~p~~Rp~~~~l~~  246 (250)
T cd05085         234 KPENRPKFSELQK  246 (250)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=2.6e-32  Score=267.17  Aligned_cols=222  Identities=20%  Similarity=0.275  Sum_probs=172.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECC----------------CCCEEEEEEeccCCCC-----------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENS----------------TGLQFACKSISKTSKS-----------------------   88 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~~avK~~~~~~~~-----------------------   88 (483)
                      .++|++.+.||+|+||.||+|.+..                ++..+|+|++......                       
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            3579999999999999999986543                3457999999754211                       


Q ss_pred             --------CcCeEEEeccCCCChHHHHhcCC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEE
Q 048594           89 --------DEGYLKREHCDGGTLVDRISDRE-----------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF  149 (483)
Q Consensus        89 --------~~~~lv~E~~~g~~L~~~l~~~~-----------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll  149 (483)
                              ...|+|+||+.+++|.+++....           .+++..+..++.||+.||+|||+.|++|+||||+||++
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili  163 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE
Confidence                    11189999999999999987642           36778999999999999999999999999999999999


Q ss_pred             eeCCCCCcEEEeecccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh--CCCCCCCCChH
Q 048594          150 TTDDENATLKATDFGLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS--GAQPFWAESLY  224 (483)
Q Consensus       150 ~~~~~~~~ikl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~--g~~pf~~~~~~  224 (483)
                         +.++.++|+|||.+..+......   ....+++.|+|||...+..++.++|+||+||++|+|++  |..||......
T Consensus       164 ---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~  240 (296)
T cd05095         164 ---GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE  240 (296)
T ss_pred             ---cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence               56778999999998765432211   12234567999998877789999999999999999998  77899776655


Q ss_pred             HHHHHHHc----cccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          225 GTLTAIMS----REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       225 ~~~~~i~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ........    .......+..+..++.+.+|+.+||+.||.+|||+.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         241 QVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            54433221    0011111122456789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=5.8e-32  Score=278.35  Aligned_cols=225  Identities=22%  Similarity=0.341  Sum_probs=169.7

Q ss_pred             ccceEEeeeecccCceeEEEEEEC----------------CCCCEEEEEEeccCCC------------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTEN----------------STGLQFACKSISKTSK------------------------   87 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~----------------~~~~~~avK~~~~~~~------------------------   87 (483)
                      .++|.+.++||+|+||+||+|...                ..++.||||.+.....                        
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            568999999999999999999752                3456899999753210                        


Q ss_pred             ---------------------------------CCcCeEEEeccCCCChHHHHhcC------------------------
Q 048594           88 ---------------------------------SDEGYLKREHCDGGTLVDRISDR------------------------  110 (483)
Q Consensus        88 ---------------------------------~~~~~lv~E~~~g~~L~~~l~~~------------------------  110 (483)
                                                       ....++|+||+.+++|.+++...                        
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence                                             11238999999999999988642                        


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecc--cccCCcccCcc
Q 048594          111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE--VVGTPLYMAPE  188 (483)
Q Consensus       111 ~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~--~~gt~~y~aPE  188 (483)
                      ..+++..+..++.||+.+|.|||+.+|+||||||+||++   +..+.+||+|||++.....+.....  ..+++.|+|||
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE  380 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV---TVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE  380 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE---CCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence            123567888999999999999999999999999999999   5667899999999976543322222  23478999999


Q ss_pred             ccCCCC--------------------C--CCcCchHHHHHHHHHHhhCCC-CCCCCChH-----------HHHHHHHccc
Q 048594          189 LLGPCK--------------------Y--GKEIDIWSAGLILYNLLSGAQ-PFWAESLY-----------GTLTAIMSRE  234 (483)
Q Consensus       189 ~~~~~~--------------------~--~~~~DiwslGvil~~ll~g~~-pf~~~~~~-----------~~~~~i~~~~  234 (483)
                      .+....                    +  ..+.|+||+||++|+|++|.. ||......           ..+..+....
T Consensus       381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~  460 (507)
T PLN03224        381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK  460 (507)
T ss_pred             hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence            875322                    1  124799999999999999886 66432111           1111222233


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHhCccCC---CCCCCHHHHHcCCcCC
Q 048594          235 IDFKSDPWPTISSSAKDLIRRMLIRDP---NNQITVAQILKHPWLN  277 (483)
Q Consensus       235 ~~~~~~~~~~~~~~~~~li~~~L~~dP---~~R~t~~e~L~h~~~~  277 (483)
                      ..+  ..++..++.+++|+.+||.++|   .+|+|++|+|+||||.
T Consensus       461 ~~~--~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~  504 (507)
T PLN03224        461 YDF--SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL  504 (507)
T ss_pred             CCc--ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence            333  3466789999999999999876   6899999999999997

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=2.5e-32  Score=266.36  Aligned_cols=217  Identities=21%  Similarity=0.258  Sum_probs=174.4

Q ss_pred             ceEEeeeecccCceeEEEEEECC-----CCCEEEEEEeccCCCC-------------------------------CcCeE
Q 048594           50 HFTIAEELCRGESGRIYLCTENS-----TGLQFACKSISKTSKS-------------------------------DEGYL   93 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~~-------------------------------~~~~l   93 (483)
                      +|.+.+.||+|+||.||+|.+..     ....+|+|.+......                               ...|+
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            47889999999999999998753     2357899987654311                               11189


Q ss_pred             EEeccCCCChHHHHhcC------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEE
Q 048594           94 KREHCDGGTLVDRISDR------------------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF  149 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~------------------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll  149 (483)
                      ++||+.+++|.+++...                        .++++..+..++.|++.||.|||+++++||||||+||++
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill  160 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV  160 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence            99999999999988642                        347889999999999999999999999999999999999


Q ss_pred             eeCCCCCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHH
Q 048594          150 TTDDENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYG  225 (483)
Q Consensus       150 ~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~  225 (483)
                         +..+.++|+|||.+........   .....++..|+|||.+.+..++.++||||||+++++|++ |..||.+.....
T Consensus       161 ---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  237 (290)
T cd05045         161 ---AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER  237 (290)
T ss_pred             ---cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence               5667899999999876532221   122345678999999888788999999999999999998 999998877666


Q ss_pred             HHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          226 TLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       226 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ....+... ...+  ....++.++.+|+.+||+.+|.+||++.+++.
T Consensus       238 ~~~~~~~~-~~~~--~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         238 LFNLLKTG-YRME--RPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HHHHHhCC-CCCC--CCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            66555433 2222  22467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=3.4e-32  Score=260.37  Aligned_cols=213  Identities=19%  Similarity=0.293  Sum_probs=175.0

Q ss_pred             eeecccCceeEEEEEECC-CC--CEEEEEEeccCCCC------------------------------CcCeEEEeccCCC
Q 048594           55 EELCRGESGRIYLCTENS-TG--LQFACKSISKTSKS------------------------------DEGYLKREHCDGG  101 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~-~~--~~~avK~~~~~~~~------------------------------~~~~lv~E~~~g~  101 (483)
                      +.||+|++|+||+|.+.. .+  ..+|+|.+......                              ...++|+||++++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG   80 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence            468999999999999865 33  36999998875431                              1118999999999


Q ss_pred             ChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce----e
Q 048594          102 TLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV----Y  175 (483)
Q Consensus       102 ~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~----~  175 (483)
                      +|.+++.+..  .+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.+||+|||.+..+.....    .
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~  157 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILL---ASDDKVKIGDFGLMRALPQNEDHYVME  157 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEE---ecCCEEEeccccccccccccccceecc
Confidence            9999997764  68999999999999999999999999999999999999   5668999999999887643211    1


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....++..|+|||.+....++.++|+||+||++|+|++ |..||...+..+....+........  .....|..+.+++.
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~  235 (257)
T cd05040         158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLE--RPEACPQDIYNVML  235 (257)
T ss_pred             cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCC--CCccCCHHHHHHHH
Confidence            12346778999999988889999999999999999998 9999988777777666664322222  12356889999999


Q ss_pred             HhCccCCCCCCCHHHHHc
Q 048594          255 RMLIRDPNNQITVAQILK  272 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~  272 (483)
                      +||..+|.+|||+.++++
T Consensus       236 ~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         236 QCWAHNPADRPTFAALRE  253 (257)
T ss_pred             HHCCCCcccCCCHHHHHH
Confidence            999999999999999876

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=7.2e-33  Score=265.51  Aligned_cols=211  Identities=18%  Similarity=0.287  Sum_probs=164.3

Q ss_pred             eeecccCceeEEEEEECCCCC-------EEEEEEeccCCCC------------------------------CcCeEEEec
Q 048594           55 EELCRGESGRIYLCTENSTGL-------QFACKSISKTSKS------------------------------DEGYLKREH   97 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~-------~~avK~~~~~~~~------------------------------~~~~lv~E~   97 (483)
                      +.||+|+||.||+|.++.++.       .+|+|.+......                              ...++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            469999999999999876544       4888887643211                              112899999


Q ss_pred             cCCCChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC-----CCCcEEEeecccceeccC
Q 048594           98 CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD-----ENATLKATDFGLAFFFEE  171 (483)
Q Consensus        98 ~~g~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~-----~~~~ikl~Dfg~a~~~~~  171 (483)
                      |.+|+|.+++..++ .+++..+..++.||+.||.|||+++|+||||||+||++..++     ..+.++++|||.+.....
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~  160 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP  160 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC
Confidence            99999999997654 589999999999999999999999999999999999996432     123489999999876543


Q ss_pred             CceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCC-CCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          172 GKVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGA-QPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      .   ....+++.|+|||.+.+. .++.++|+||+|+++|+|++|. +||.......... +......++    +..+.++
T Consensus       161 ~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~  232 (258)
T cd05078         161 K---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYEDRHQLP----APKWTEL  232 (258)
T ss_pred             c---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHHccccCC----CCCcHHH
Confidence            2   234678899999999763 4788999999999999999984 6665544433322 222222222    2456889


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .++|.+||+.+|.+|||++++++.
T Consensus       233 ~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         233 ANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             HHHHHHHhccChhhCCCHHHHHHh
Confidence            999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.4e-32  Score=265.60  Aligned_cols=219  Identities=22%  Similarity=0.356  Sum_probs=171.5

Q ss_pred             cceEEeeeecccCceeEEEEE----ECCCCCEEEEEEeccCCCC--------------------------------CcCe
Q 048594           49 LHFTIAEELCRGESGRIYLCT----ENSTGLQFACKSISKTSKS--------------------------------DEGY   92 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~----~~~~~~~~avK~~~~~~~~--------------------------------~~~~   92 (483)
                      ++|++++.||+|+||.||+|.    +..++..+|+|.+......                                ...|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            579999999999999999997    4567899999998653210                                1128


Q ss_pred             EEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           93 LKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +|+||+++++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||++   +..+.++|+|||.+.....
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~~~~  160 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV---ESENRVKIGDFGLTKVLPQ  160 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE---CCCCeEEECCCcccccccC
Confidence            999999999999999764 568999999999999999999999999999999999999   5677899999999987643


Q ss_pred             Ccee----cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHH---------------HHHHHHc
Q 048594          172 GKVY----EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG---------------TLTAIMS  232 (483)
Q Consensus       172 ~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~---------------~~~~i~~  232 (483)
                      ....    ....++..|+|||.+.+..++.++|+||+||++++|++|..|+.......               .+..+..
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd05081         161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK  240 (284)
T ss_pred             CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh
Confidence            3211    11123446999999988888999999999999999999887764332110               0111111


Q ss_pred             cccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          233 REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ....+  +....++.++.+||.+||..+|++|||+.+++.
T Consensus       241 ~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         241 NNGRL--PAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             cCCcC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            11111  123467899999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=2.4e-32  Score=277.58  Aligned_cols=221  Identities=21%  Similarity=0.303  Sum_probs=176.1

Q ss_pred             ccceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCCCC--------------------------------c
Q 048594           48 KLHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSKSD--------------------------------E   90 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~--------------------------------~   90 (483)
                      .++|.+.+.||+|+||.||+|.++     .++..||+|++.......                                .
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~  115 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP  115 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence            467889999999999999999854     456789999997643111                                1


Q ss_pred             CeEEEeccCCCChHHHHhcCC-----------------------------------------------------------
Q 048594           91 GYLKREHCDGGTLVDRISDRE-----------------------------------------------------------  111 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~-----------------------------------------------------------  111 (483)
                      .|+|+|||.+|+|.+++...+                                                           
T Consensus       116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (401)
T cd05107         116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM  195 (401)
T ss_pred             cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence            189999999999999986431                                                           


Q ss_pred             ---------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC
Q 048594          112 ---------------------------------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD  152 (483)
Q Consensus       112 ---------------------------------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~  152 (483)
                                                             .+++..+..++.||+.||.|||+.+++||||||+|||+   
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl---  272 (401)
T cd05107         196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI---  272 (401)
T ss_pred             hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE---
Confidence                                                   35677788999999999999999999999999999999   


Q ss_pred             CCCCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHH
Q 048594          153 DENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLT  228 (483)
Q Consensus       153 ~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~  228 (483)
                      +..+.++|+|||++........   .....+++.|+|||.+.+..++.++|+||+||++|+|++ |..||......+...
T Consensus       273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~  352 (401)
T cd05107         273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFY  352 (401)
T ss_pred             eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHH
Confidence            4567899999999976432211   122356788999999988788999999999999999998 899997765555444


Q ss_pred             HHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          229 AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       229 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ..........  ....++.++.+++.+||..+|.+||++.++++.
T Consensus       353 ~~~~~~~~~~--~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         353 NAIKRGYRMA--KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHHHcCCCCC--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            4333332222  224578999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.9e-32  Score=258.28  Aligned_cols=211  Identities=25%  Similarity=0.328  Sum_probs=172.5

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeEEEeccCCCCh
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYLKREHCDGGTL  103 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E~~~g~~L  103 (483)
                      +.||.|++|.||+|.+.. ++.+|+|.+......                               ...|+|+||+.|++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l   79 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL   79 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence            469999999999999987 999999988764321                               011899999999999


Q ss_pred             HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee---cccc
Q 048594          104 VDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY---EEVV  179 (483)
Q Consensus       104 ~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~---~~~~  179 (483)
                      .+++... ..+++..+..++.+++.+|.|||+++++||||+|+||++   +.++.++|+|||.+.........   ....
T Consensus        80 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (251)
T cd05041          80 LTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSREEEGGIYTVSDGLKQ  156 (251)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE---cCCCcEEEeeccccccccCCcceeccccCc
Confidence            9999653 568999999999999999999999999999999999999   66778999999998765422211   1122


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI  258 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  258 (483)
                      ++..|+|||.+.+..++.++|+|||||++|+|++ |..||...........+.... ..  ......+.++.+++.+||.
T Consensus       157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~li~~~l~  233 (251)
T cd05041         157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-RM--PAPQLCPEEIYRLMLQCWA  233 (251)
T ss_pred             ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC-CC--CCCccCCHHHHHHHHHHhc
Confidence            3556999999988888999999999999999999 889998777666666554432 11  1224678999999999999


Q ss_pred             cCCCCCCCHHHHHc
Q 048594          259 RDPNNQITVAQILK  272 (483)
Q Consensus       259 ~dP~~R~t~~e~L~  272 (483)
                      .+|.+|||+.++++
T Consensus       234 ~~p~~Rp~~~ell~  247 (251)
T cd05041         234 YDPENRPSFSEIYN  247 (251)
T ss_pred             cChhhCcCHHHHHH
Confidence            99999999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=3e-34  Score=258.77  Aligned_cols=224  Identities=24%  Similarity=0.352  Sum_probs=185.3

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC--------------------------------eEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------------YLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------------------------------~lv~E~   97 (483)
                      ..+-+..||.|+||+|++..|+.+|+..|||.++....+.+.                                +|-||+
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL  144 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL  144 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence            334467799999999999999999999999999876542211                                889999


Q ss_pred             cCCCChHHHH-----hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           98 CDGGTLVDRI-----SDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        98 ~~g~~L~~~l-----~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+- +|..+-     .+...++|..+..|..-.+.||.||-. .+|+|||+||+|||+   +..|.|||||||.+..+..
T Consensus       145 Md~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGqLv~  220 (361)
T KOG1006|consen  145 MDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQLVD  220 (361)
T ss_pred             Hhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccchHhHHH
Confidence            865 443322     234689999999999999999999985 589999999999999   7889999999999988776


Q ss_pred             CceecccccCCcccCccccCC--CCCCCcCchHHHHHHHHHHhhCCCCCCCCC-hHHHHHHHHccccCCCCCCC--CCCC
Q 048594          172 GKVYEEVVGTPLYMAPELLGP--CKYGKEIDIWSAGLILYNLLSGAQPFWAES-LYGTLTAIMSREIDFKSDPW--PTIS  246 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~--~~~~  246 (483)
                      +-......|...|||||.+..  ..|.-++|+||||++|||+.||..|+.+-+ ..+++..+..+.++......  -+++
T Consensus       221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s  300 (361)
T KOG1006|consen  221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYS  300 (361)
T ss_pred             HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccC
Confidence            655566788999999999854  358889999999999999999999997754 45667777777655443322  2478


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ..++.||.-||.+|.+.||.+.+++++||++
T Consensus       301 ~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr  331 (361)
T KOG1006|consen  301 FSMVRFINTCLIKDRSDRPKYDDLKKFPFYR  331 (361)
T ss_pred             HHHHHHHHHHhhcccccCcchhhhhcCchhh
Confidence            9999999999999999999999999999998

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=7.3e-32  Score=258.80  Aligned_cols=212  Identities=20%  Similarity=0.270  Sum_probs=167.4

Q ss_pred             eeecccCceeEEEEEECC---CCCEEEEEEeccCCC--------------------------------CCcCeEEEeccC
Q 048594           55 EELCRGESGRIYLCTENS---TGLQFACKSISKTSK--------------------------------SDEGYLKREHCD   99 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~--------------------------------~~~~~lv~E~~~   99 (483)
                      +.||+|+||.||+|.+..   .+..+|+|.+.....                                ....|+|+||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            468999999999998653   346799999854211                                001289999999


Q ss_pred             CCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce----
Q 048594          100 GGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV----  174 (483)
Q Consensus       100 g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~----  174 (483)
                      +++|.+++... ...++..+..++.||+.||.|||+.+++||||||+|||+   +..+.+||+|||.+........    
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili---~~~~~~kl~dfg~~~~~~~~~~~~~~  157 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCML---DESFTVKVADFGLARDIYDKEYYSVH  157 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCccccccccCCcceeec
Confidence            99999999764 456778888999999999999999999999999999999   5677899999999875432211    


Q ss_pred             -ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          175 -YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       175 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                       .....+++.|+|||.+.+..++.++||||||+++|+|++ |.+||...+.......+.......   .....+..+.++
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l  234 (262)
T cd05058         158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLL---QPEYCPDPLYEV  234 (262)
T ss_pred             ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC---CCCcCCHHHHHH
Confidence             112345678999999988788999999999999999999 566777666666655554432211   113467899999


Q ss_pred             HHHhCccCCCCCCCHHHHHc
Q 048594          253 IRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.+||..+|++||++.+++.
T Consensus       235 i~~cl~~~p~~Rp~~~~il~  254 (262)
T cd05058         235 MLSCWHPKPEMRPTFSELVS  254 (262)
T ss_pred             HHHHcCCChhhCCCHHHHHH
Confidence            99999999999999999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=7.3e-32  Score=258.10  Aligned_cols=210  Identities=20%  Similarity=0.227  Sum_probs=165.2

Q ss_pred             eeecccCceeEEEEEECCCC----------CEEEEEEeccCCCC----------------------------CcCeEEEe
Q 048594           55 EELCRGESGRIYLCTENSTG----------LQFACKSISKTSKS----------------------------DEGYLKRE   96 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~----------~~~avK~~~~~~~~----------------------------~~~~lv~E   96 (483)
                      +.||+|+||.||+|.++.++          ..+++|++......                            ...++|+|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e   80 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE   80 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence            46999999999999998776          45888887654321                            12289999


Q ss_pred             ccCCCChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC----CCCcEEEeecccceeccC
Q 048594           97 HCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD----ENATLKATDFGLAFFFEE  171 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~----~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+.+++|.+++.... .+++..+..++.||+.||.|||+++|+|+||||+||+++.++    ....++|+|||.+.....
T Consensus        81 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~  160 (259)
T cd05037          81 YVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS  160 (259)
T ss_pred             cCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc
Confidence            999999999998765 799999999999999999999999999999999999996432    223799999999887543


Q ss_pred             CceecccccCCcccCccccCCC--CCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          172 GKVYEEVVGTPLYMAPELLGPC--KYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                         .....++..|+|||.+.+.  .++.++|+||+|+++|+|++ |..||............... ...+    ......
T Consensus       161 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~-~~~~----~~~~~~  232 (259)
T cd05037         161 ---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQ-HRLP----MPDCAE  232 (259)
T ss_pred             ---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcC-CCCC----CCCchH
Confidence               2234567789999999876  67899999999999999999 57888665433332222211 1111    112378


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHc
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.++|.+||..+|.+|||+.++++
T Consensus       233 ~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         233 LANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             HHHHHHHHhccChhhCCCHHHHHH
Confidence            999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.98  E-value=6.5e-32  Score=260.17  Aligned_cols=215  Identities=23%  Similarity=0.340  Sum_probs=170.9

Q ss_pred             eeecccCceeEEEEEECCCC------CEEEEEEeccCCCC-------------------------------CcCeEEEec
Q 048594           55 EELCRGESGRIYLCTENSTG------LQFACKSISKTSKS-------------------------------DEGYLKREH   97 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~-------------------------------~~~~lv~E~   97 (483)
                      +.||+|++|.||+|.++...      ..+|+|.+.+....                               ...|+|+||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            36899999999999986544      67999988654211                               111999999


Q ss_pred             cCCCChHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC--CCCcEEEeeccccee
Q 048594           98 CDGGTLVDRISDR-------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD--ENATLKATDFGLAFF  168 (483)
Q Consensus        98 ~~g~~L~~~l~~~-------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~--~~~~ikl~Dfg~a~~  168 (483)
                      ++|++|.+++...       ..+++..+..++.||+.||.|||+++++|+||+|+||++..++  ....++|+|||++..
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence            9999999999642       3478899999999999999999999999999999999996432  223799999999876


Q ss_pred             ccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCC
Q 048594          169 FEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       169 ~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  244 (483)
                      .......   ....++..|+|||.+.+..++.++|+|||||++|+|++ |..||...........+.....   ......
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~  237 (269)
T cd05044         161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGR---LQKPEN  237 (269)
T ss_pred             cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCc---cCCccc
Confidence            5332211   12245678999999988889999999999999999998 9999987776666665544321   122246


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +|..+.++|.+||.++|.+||++.++++
T Consensus       238 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         238 CPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             chHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            7899999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.98  E-value=1e-32  Score=279.03  Aligned_cols=217  Identities=28%  Similarity=0.476  Sum_probs=173.9

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-------------------------------------CCcC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-------------------------------------SDEG   91 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------------------------------------~~~~   91 (483)
                      .-|..-+.||+|+||.||+++++.||+.||||.+.+...                                     ....
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~   92 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP   92 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence            447778899999999999999999999999999987431                                     1111


Q ss_pred             eEEEeccCCCChHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC-CCCcEEEeecccce
Q 048594           92 YLKREHCDGGTLVDRISDR---ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD-ENATLKATDFGLAF  167 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~---~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~-~~~~ikl~Dfg~a~  167 (483)
                      .+|||||.||+|...+.+.   ..+++.+++.++..+..||.|||.+||+||||||.||++.... .....||+|||.|+
T Consensus        93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar  172 (732)
T KOG4250|consen   93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR  172 (732)
T ss_pred             eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence            8999999999999999764   5699999999999999999999999999999999999986533 34457999999999


Q ss_pred             eccCCceecccccCCcccCccccC-CCCCCCcCchHHHHHHHHHHhhCCCCCCCCC----hHHHHHHHHccc--------
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLG-PCKYGKEIDIWSAGLILYNLLSGAQPFWAES----LYGTLTAIMSRE--------  234 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll~g~~pf~~~~----~~~~~~~i~~~~--------  234 (483)
                      .++.+......+||+.|.+||... +..|+..+|.||+||++|+++||..||....    ..+....+....        
T Consensus       173 el~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~  252 (732)
T KOG4250|consen  173 ELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGA  252 (732)
T ss_pred             cCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEee
Confidence            999998889999999999999998 5788999999999999999999999995422    223333333211        


Q ss_pred             -------cCCCC--CCCCCCC----HHHHHHHHHhCccCCCCCC
Q 048594          235 -------IDFKS--DPWPTIS----SSAKDLIRRMLIRDPNNQI  265 (483)
Q Consensus       235 -------~~~~~--~~~~~~~----~~~~~li~~~L~~dP~~R~  265 (483)
                             +.+..  +..-.++    ..+-.++..+|..+|.+|.
T Consensus       253 ~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  253 QEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             ecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence                   11110  0111223    2345678889999999998

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.98  E-value=1e-31  Score=259.41  Aligned_cols=216  Identities=18%  Similarity=0.238  Sum_probs=173.6

Q ss_pred             eEEeeeecccCceeEEEEEEC---CCCCEEEEEEeccCCCCC--------------------------------------
Q 048594           51 FTIAEELCRGESGRIYLCTEN---STGLQFACKSISKTSKSD--------------------------------------   89 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~~--------------------------------------   89 (483)
                      |.+.+.||+|+||.||+|..+   .++..+|+|++.......                                      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            677889999999999999864   357899999886532110                                      


Q ss_pred             cCeEEEeccCCCChHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeec
Q 048594           90 EGYLKREHCDGGTLVDRISDR------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF  163 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Df  163 (483)
                      ..++++||+.+++|.+++...      ..+++..+..++.||+.||+|||+++|+||||||+||++   +.++.++|+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili---~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE---cCCCCEEECcc
Confidence            015788999999998887432      257899999999999999999999999999999999999   56778999999


Q ss_pred             ccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCC
Q 048594          164 GLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKS  239 (483)
Q Consensus       164 g~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (483)
                      |.+.........   ....+++.|++||.+....++.++||||||+++|+|++ |.+||.+.........+.......  
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~--  235 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLK--  235 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCC--
Confidence            998865432211   12234567999999988788999999999999999999 899998777666666655432211  


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                       ..+..+..+.+++.+||..+|++|||+.+++.
T Consensus       236 -~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~  267 (273)
T cd05074         236 -QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD  267 (273)
T ss_pred             -CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence             12457789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.98  E-value=2.5e-32  Score=252.57  Aligned_cols=224  Identities=28%  Similarity=0.444  Sum_probs=185.8

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC----------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG----------------------------------   91 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------   91 (483)
                      .+..||.-++.+|.|.- .|..+-+..+++++|+|...... .+..                                  
T Consensus        14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf-~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~   91 (369)
T KOG0665|consen   14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPF-QNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLE   91 (369)
T ss_pred             eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcc-ccCccchhhhhhhhhhhhhcccceeeeeeccCccccHH
Confidence            45678999999999999 89999999999999999886542 1110                                  


Q ss_pred             -----eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           92 -----YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        92 -----~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                           |+|||++.+ +|...+.  -.+....+..++.|+++|++|||+.||+||||||+||++   .....+|++|||+|
T Consensus        92 ~~~e~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~dfg~a  165 (369)
T KOG0665|consen   92 EFQEVYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILDFGLA  165 (369)
T ss_pred             HHHhHHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeeccchhh
Confidence                 999999977 8888887  457889999999999999999999999999999999999   77889999999999


Q ss_pred             eeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc-----------
Q 048594          167 FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI-----------  235 (483)
Q Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~-----------  235 (483)
                      +.-...-..+..+.+..|.|||++.+..|...+||||+||++.+|++|...|.|.+..+.+..+...--           
T Consensus       166 r~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~  245 (369)
T KOG0665|consen  166 RTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQ  245 (369)
T ss_pred             cccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhh
Confidence            875544345567889999999999988899999999999999999999999998887666665543110           


Q ss_pred             --------------------CCCCCCCC-------CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          236 --------------------DFKSDPWP-------TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       236 --------------------~~~~~~~~-------~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                          .++...|+       .-+..+++++.+||..||++|.|++++|+|||++
T Consensus       246 ~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  246 PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence                                01111111       1235689999999999999999999999999997

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.98  E-value=3.9e-31  Score=255.02  Aligned_cols=214  Identities=20%  Similarity=0.286  Sum_probs=163.4

Q ss_pred             eeecccCceeEEEEEEC--CCCCEEEEEEeccCCCC-------------------------------CcCeEEEeccCCC
Q 048594           55 EELCRGESGRIYLCTEN--STGLQFACKSISKTSKS-------------------------------DEGYLKREHCDGG  101 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E~~~g~  101 (483)
                      +.||+|+||.||+|...  .++..+|+|.+......                               ...|+||||++++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            46899999999999854  45678999988654311                               1118999999999


Q ss_pred             ChHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce--
Q 048594          102 TLVDRISDR-----ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV--  174 (483)
Q Consensus       102 ~L~~~l~~~-----~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~--  174 (483)
                      +|.+++...     ...++..+..++.|++.||.|||+.+++|+||||+||++   +..+.++|+|||.+........  
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~---~~~~~~kL~dfg~~~~~~~~~~~~  157 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLL---TADLTVKIGDYGLSHNKYKEDYYV  157 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEECCccccccccCcceee
Confidence            999999653     245677888999999999999999999999999999999   5677899999999865432221  


Q ss_pred             -ecccccCCcccCccccCCC-------CCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHH-ccccCCCCCCC-C
Q 048594          175 -YEEVVGTPLYMAPELLGPC-------KYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIM-SREIDFKSDPW-P  243 (483)
Q Consensus       175 -~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~-~~~~~~~~~~~-~  243 (483)
                       .....+++.|+|||++.+.       .++.++|+||+|+++|+|++ |..||......+...... ......+.+.. .
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (269)
T cd05087         158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKL  237 (269)
T ss_pred             cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCC
Confidence             1224567889999988542       35789999999999999996 999997765554433322 22232332222 2


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ..+..+.+++.+|+ .+|.+|||+++++.
T Consensus       238 ~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         238 PLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             CCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            45788999999998 68999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.97  E-value=2.5e-31  Score=255.54  Aligned_cols=211  Identities=19%  Similarity=0.276  Sum_probs=162.4

Q ss_pred             eeecccCceeEEEEEECC------------CCCEEEEEEeccCCCC------------------------------CcCe
Q 048594           55 EELCRGESGRIYLCTENS------------TGLQFACKSISKTSKS------------------------------DEGY   92 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~------------~~~~~avK~~~~~~~~------------------------------~~~~   92 (483)
                      +.||+|++|.||+|....            ....+|+|++......                              ...+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            468999999999998532            2336899987543211                              1129


Q ss_pred             EEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCC----CCcEEEeecccce
Q 048594           93 LKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE----NATLKATDFGLAF  167 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~----~~~ikl~Dfg~a~  167 (483)
                      +|+||+++++|..++... ..+++..+..++.||+.||+|||+++|+||||||+|||+..++.    ...++++|||.+.
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~  160 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI  160 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence            999999999999888753 57999999999999999999999999999999999999964221    1248999999987


Q ss_pred             eccCCceecccccCCcccCccccC-CCCCCCcCchHHHHHHHHHHh-hCCCCCCCCChHHHHHHHHccccCCCCCCCCCC
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLG-PCKYGKEIDIWSAGLILYNLL-SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      .....   ....++..|+|||.+. +..++.++||||+||++|+|+ .|..||......+. ..........    ....
T Consensus       161 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~~~~~----~~~~  232 (262)
T cd05077         161 TVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ERFYEGQCML----VTPS  232 (262)
T ss_pred             cccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HHHHhcCccC----CCCC
Confidence            55322   2346788899999886 456889999999999999998 58888876543332 2222222221    1234


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      +.++.++|.+||+.||.+||++.+++++
T Consensus       233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         233 CKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             hHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            6789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.97  E-value=2e-31  Score=258.59  Aligned_cols=219  Identities=24%  Similarity=0.375  Sum_probs=173.7

Q ss_pred             cceEEeeeecccCceeEEEEEEC----CCCCEEEEEEeccCCCC---------------------------------CcC
Q 048594           49 LHFTIAEELCRGESGRIYLCTEN----STGLQFACKSISKTSKS---------------------------------DEG   91 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~~avK~~~~~~~~---------------------------------~~~   91 (483)
                      .+|.+.+.||+|+||.||+|...    .++..+|+|++......                                 ...
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            46888999999999999999864    45889999999765431                                 011


Q ss_pred             eEEEeccCCCChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           92 YLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      |+|+||+++++|.+++.... .+++..+..++.||+.||.|||++|++|+||+|+||++   +.++.++|+|||.+....
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~  160 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV---ESEDLVKISDFGLAKVLP  160 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEcccccccccc
Confidence            89999999999999997654 69999999999999999999999999999999999999   566899999999998765


Q ss_pred             CCcee----cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHH--------------HHHHHHc
Q 048594          171 EGKVY----EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG--------------TLTAIMS  232 (483)
Q Consensus       171 ~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~--------------~~~~i~~  232 (483)
                      .....    ....++..|+|||.+.+..++.++|+||+|+++++|++|..||.......              .+.....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd05038         161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK  240 (284)
T ss_pred             cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence            32211    11234556999999988788999999999999999999999986543211              1112222


Q ss_pred             cccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          233 REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .....+  .....+.++.+++.+||..+|.+|||+.+++.
T Consensus       241 ~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         241 EGERLP--RPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             cCCcCC--CCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            222222  12356789999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=2e-31  Score=258.03  Aligned_cols=210  Identities=19%  Similarity=0.261  Sum_probs=162.7

Q ss_pred             eecccCceeEEEEEECCC------------------------CCEEEEEEeccCCC------------------------
Q 048594           56 ELCRGESGRIYLCTENST------------------------GLQFACKSISKTSK------------------------   87 (483)
Q Consensus        56 ~lg~G~~g~V~~~~~~~~------------------------~~~~avK~~~~~~~------------------------   87 (483)
                      .||+|+||.||+|....+                        ...+|+|++.....                        
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            599999999999985432                        24589998864321                        


Q ss_pred             ------CCcCeEEEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC----CCCC
Q 048594           88 ------SDEGYLKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD----DENA  156 (483)
Q Consensus        88 ------~~~~~lv~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~----~~~~  156 (483)
                            ....|+|||||++++|..++.. .+.+++..+..++.||+.||+|||+++|+||||||+||++...    ....
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~  161 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSP  161 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccc
Confidence                  1122899999999999999865 4678999999999999999999999999999999999999642    1234


Q ss_pred             cEEEeecccceeccCCceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHh-hCCCCCCCCChHHHHHHHHccc
Q 048594          157 TLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLL-SGAQPFWAESLYGTLTAIMSRE  234 (483)
Q Consensus       157 ~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll-~g~~pf~~~~~~~~~~~i~~~~  234 (483)
                      .++++|||.+......   ....++..|+|||.+.+ ..++.++|+||+|+++|+++ +|..||...........+ ...
T Consensus       162 ~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~  237 (274)
T cd05076         162 FIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFY-EKK  237 (274)
T ss_pred             eeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHH-Hhc
Confidence            5899999987643222   23357788999998865 45789999999999999985 799999876554433322 222


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          235 IDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       235 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ...+    ...++.+.++|.+||+.+|.+|||+.++|++
T Consensus       238 ~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         238 HRLP----EPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             cCCC----CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            2222    2346789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.97  E-value=4.6e-31  Score=254.46  Aligned_cols=214  Identities=19%  Similarity=0.263  Sum_probs=163.2

Q ss_pred             eeecccCceeEEEEEECC--CCCEEEEEEeccCCCC-------------------------------CcCeEEEeccCCC
Q 048594           55 EELCRGESGRIYLCTENS--TGLQFACKSISKTSKS-------------------------------DEGYLKREHCDGG  101 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~--~~~~~avK~~~~~~~~-------------------------------~~~~lv~E~~~g~  101 (483)
                      +.||+|+||+||+|....  ....+|+|.+......                               ...|+||||+.++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            368999999999996532  3457899987643211                               1119999999999


Q ss_pred             ChHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce--
Q 048594          102 TLVDRISDRE-----RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV--  174 (483)
Q Consensus       102 ~L~~~l~~~~-----~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~--  174 (483)
                      +|.+++....     ..++..+..++.||+.||+|||+++|+||||||+||++   +.++.+||+|||++........  
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~~~~~~~~  157 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL---TADLSVKIGDYGLALEQYPEDYYI  157 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe---cCCCcEEEeccccccccccchhee
Confidence            9999997642     24678889999999999999999999999999999999   5677899999999865432211  


Q ss_pred             -ecccccCCcccCccccCC-------CCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHc-cccCCCCCC-CC
Q 048594          175 -YEEVVGTPLYMAPELLGP-------CKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS-REIDFKSDP-WP  243 (483)
Q Consensus       175 -~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~-~~~~~~~~~-~~  243 (483)
                       .....+++.|+|||++..       ..++.++|+||+||++|+|++ |..||........+..+.. .....+.+. ..
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (269)
T cd05042         158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDL  237 (269)
T ss_pred             ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccc
Confidence             122345677999998742       346789999999999999999 7889877766665555433 333333322 23


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .++..+.+++..|+ .||.+|||++++++
T Consensus       238 ~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         238 KYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             cCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            57788999999998 59999999999876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-31  Score=269.01  Aligned_cols=223  Identities=20%  Similarity=0.335  Sum_probs=182.8

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCC---E-EEEEEeccCCC---------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGL---Q-FACKSISKTSK---------------------------------   87 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~-~avK~~~~~~~---------------------------------   87 (483)
                      +--+++-.+.+.||+|+||.||+|..+..+.   . ||+|.......                                 
T Consensus       153 el~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~  232 (474)
T KOG0194|consen  153 ELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL  232 (474)
T ss_pred             EEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC
Confidence            3345666677999999999999998775432   3 89999875221                                 


Q ss_pred             CCcCeEEEeccCCCChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           88 SDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        88 ~~~~~lv~E~~~g~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                      ....|||||+|.||+|.++|...+ .++..+...++.+.+.||+|||+++++||||-..|+|+   +....+||+|||++
T Consensus       233 ~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~---~~~~~vKISDFGLs  309 (474)
T KOG0194|consen  233 EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLY---SKKGVVKISDFGLS  309 (474)
T ss_pred             CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhee---cCCCeEEeCccccc
Confidence            111299999999999999999886 49999999999999999999999999999999999999   55567899999998


Q ss_pred             eeccCCceeccc-ccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCC
Q 048594          167 FFFEEGKVYEEV-VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       167 ~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  244 (483)
                      +....-...... .-...|+|||.+...-|+.++||||+||++||+++ |..||.+....+....|.......+.+  +.
T Consensus       310 ~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~--~~  387 (474)
T KOG0194|consen  310 RAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP--SK  387 (474)
T ss_pred             cCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC--CC
Confidence            765311111111 23457999999998899999999999999999999 899999999998888886655544433  36


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .|.++..++.+|+..+|..|||+.++.+
T Consensus       388 ~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  388 TPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             CHHHHHHHHHHhccCChhhccCHHHHHH
Confidence            7888999999999999999999998866

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.97  E-value=1.4e-30  Score=245.59  Aligned_cols=212  Identities=43%  Similarity=0.717  Sum_probs=178.7

Q ss_pred             CceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEEeccCCCChHHHHhc
Q 048594           61 ESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKREHCDGGTLVDRISD  109 (483)
Q Consensus        61 ~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E~~~g~~L~~~l~~  109 (483)
                      +||.||+|++..+|+.+|+|++.......                               ..++++||+.+++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            58999999999999999999997654321                               11899999999999999988


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccccCCcccCccc
Q 048594          110 RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPEL  189 (483)
Q Consensus       110 ~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~  189 (483)
                      ...+++..+..++.+++.++.+||+.+++|+||+|.||++   +.++.++|+|||.+.............++..|+|||.
T Consensus        81 ~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~  157 (244)
T smart00220       81 RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL---DEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV  157 (244)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE---CCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence            7679999999999999999999999999999999999999   5668999999999988765444455678889999999


Q ss_pred             cCCCCCCCcCchHHHHHHHHHHhhCCCCCCC-CChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHH
Q 048594          190 LGPCKYGKEIDIWSAGLILYNLLSGAQPFWA-ESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVA  268 (483)
Q Consensus       190 ~~~~~~~~~~DiwslGvil~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  268 (483)
                      +....++.++|+||+|++++++++|..||.. .........+........ .....++.++.+++.+||..+|.+||++.
T Consensus       158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~  236 (244)
T smart00220      158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP-PPEWKISPEAKDLIRKLLVKDPEKRLTAE  236 (244)
T ss_pred             HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCc-cccccCCHHHHHHHHHHccCCchhccCHH
Confidence            9877889999999999999999999999987 444444554444333322 22222789999999999999999999999


Q ss_pred             HHHcCCcC
Q 048594          269 QILKHPWL  276 (483)
Q Consensus       269 e~L~h~~~  276 (483)
                      ++++||||
T Consensus       237 ~~~~~~~~  244 (244)
T smart00220      237 EALQHPFF  244 (244)
T ss_pred             HHhhCCCC
Confidence            99999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.97  E-value=2.7e-32  Score=241.22  Aligned_cols=226  Identities=27%  Similarity=0.486  Sum_probs=184.3

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEEe
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKRE   96 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~E   96 (483)
                      -.++|++.+.+|+|-|+.||.|.+-.+++.++||++++....                              ....+|+|
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE  115 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE  115 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence            457899999999999999999999999999999999764311                              11178888


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE  176 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~  176 (483)
                      |.+..+....-   .+++...++.++.+++.||.|||+.||.|||+||.|++++  .....++|+|+|+|.+..++..++
T Consensus       116 ~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId--h~~rkLrlIDWGLAEFYHp~~eYn  190 (338)
T KOG0668|consen  116 YVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEYN  190 (338)
T ss_pred             hhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec--hhhceeeeeecchHhhcCCCceee
Confidence            88775554443   4688899999999999999999999999999999999995  355689999999999999988888


Q ss_pred             ccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCC-CCChHHHHHHHHcc-------------ccCC----
Q 048594          177 EVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFW-AESLYGTLTAIMSR-------------EIDF----  237 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~-~~~~~~~~~~i~~~-------------~~~~----  237 (483)
                      -.+.+..|..||.+..- .|....|+||+||++..|+..+.||. |.+..+++-.|..-             .+..    
T Consensus       191 VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~  270 (338)
T KOG0668|consen  191 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQF  270 (338)
T ss_pred             eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhH
Confidence            88889999999998654 47889999999999999999888874 55555555554321             1111    


Q ss_pred             -------CCCCC---------CCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          238 -------KSDPW---------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       238 -------~~~~~---------~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                             ...+|         .-+++++.+|+.++|..|..+|+||.|++.||||.
T Consensus       271 ~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~  326 (338)
T KOG0668|consen  271 EDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFA  326 (338)
T ss_pred             hhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHH
Confidence                   11122         12579999999999999999999999999999997

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.97  E-value=2.3e-30  Score=249.63  Aligned_cols=213  Identities=18%  Similarity=0.276  Sum_probs=161.6

Q ss_pred             eecccCceeEEEEEECCC--CCEEEEEEeccCCCC-------------------------------CcCeEEEeccCCCC
Q 048594           56 ELCRGESGRIYLCTENST--GLQFACKSISKTSKS-------------------------------DEGYLKREHCDGGT  102 (483)
Q Consensus        56 ~lg~G~~g~V~~~~~~~~--~~~~avK~~~~~~~~-------------------------------~~~~lv~E~~~g~~  102 (483)
                      .||+|+||.||++.....  ...+++|.+......                               ...|+|||||.+++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            599999999999975432  345677776543211                               11199999999999


Q ss_pred             hHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC---cee
Q 048594          103 LVDRISDR----ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG---KVY  175 (483)
Q Consensus       103 L~~~l~~~----~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~---~~~  175 (483)
                      |.+++.+.    ...++..+..++.||+.||.|||+.+++|+||||+|||+   +.++.++|+|||.+......   ...
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~---~~~~~~~l~Dfg~~~~~~~~~~~~~~  158 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL---TSDLTVKVGDYGIGPSRYKEDYIETE  158 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE---cCCccEEecccccccccCcchhhhcc
Confidence            99999754    346777888999999999999999999999999999999   56778999999987642211   112


Q ss_pred             cccccCCcccCccccCC-------CCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccc-cCCCCCC-CCCC
Q 048594          176 EEVVGTPLYMAPELLGP-------CKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSRE-IDFKSDP-WPTI  245 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~-~~~~~~~-~~~~  245 (483)
                      ....++..|+|||++..       ..++.++||||+||++|+|++ |..||........+..+.... .....+. ...+
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (268)
T cd05086         159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPY  238 (268)
T ss_pred             cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCC
Confidence            24567889999998743       234678999999999999997 577887766666666554332 2222222 2347


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ++.+.+++..|| .+|.+|||++++++
T Consensus       239 ~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         239 SERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             cHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            888999999999 67999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.3e-30  Score=257.53  Aligned_cols=225  Identities=23%  Similarity=0.325  Sum_probs=174.8

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------C-cCe
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------D-EGY   92 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~-~~~   92 (483)
                      ....++.|.....||+|+||.||+|.-.. |..||||.+......                              . ..+
T Consensus        70 l~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~  148 (361)
T KOG1187|consen   70 LRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRL  148 (361)
T ss_pred             HHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEE
Confidence            34556788888999999999999999774 489999988775532                              1 138


Q ss_pred             EEEeccCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           93 LKREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNG---IMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                      ||+||++.|+|.+.|....  +++|....+|+..++.||+|||...   |+||||||.|||+   +.+..+||+|||+|.
T Consensus       149 LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~aKlsDFGLa~  225 (361)
T KOG1187|consen  149 LVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNAKLSDFGLAK  225 (361)
T ss_pred             EEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCEEccCccCcc
Confidence            9999999999999998765  8999999999999999999999854   9999999999999   788999999999997


Q ss_pred             eccC-Cceeccc-ccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC---hHHH----HHHHHccccC-C
Q 048594          168 FFEE-GKVYEEV-VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES---LYGT----LTAIMSREID-F  237 (483)
Q Consensus       168 ~~~~-~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~---~~~~----~~~i~~~~~~-~  237 (483)
                      .... ....... .||.+|+|||+...+..+.++||||+||++.||++|+.|.....   ....    ...+..+... +
T Consensus       226 ~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~ei  305 (361)
T KOG1187|consen  226 LGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREI  305 (361)
T ss_pred             cCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhhe
Confidence            6544 3333333 89999999999988789999999999999999999998876432   1111    1122222111 1


Q ss_pred             CCCCC--CCCC--HH---HHHHHHHhCccCCCCCCCHHHHHc
Q 048594          238 KSDPW--PTIS--SS---AKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       238 ~~~~~--~~~~--~~---~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ..+..  ...+  .+   +..+..+|++.+|..||++.|+++
T Consensus       306 iD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  306 VDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             eCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            11111  1223  23   456677999999999999999754

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-30  Score=278.49  Aligned_cols=219  Identities=24%  Similarity=0.376  Sum_probs=182.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCC-----EEEEEEeccCCCCCc-------------------------------C
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGL-----QFACKSISKTSKSDE-------------------------------G   91 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~avK~~~~~~~~~~-------------------------------~   91 (483)
                      ...-++.+.||+|.||.||.|....-..     .||+|.+.+.....+                               .
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            3567789999999999999998764332     389999887642211                               1


Q ss_pred             eEEEeccCCCChHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           92 YLKREHCDGGTLVDRISDR-------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~-------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                      +|++|||+||+|..+|.+.       ..++......++.+|+.|+.||+++++|||||...|+|+   +....|||+|||
T Consensus       771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL---~~~r~VKIaDFG  847 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLL---DERRVVKIADFG  847 (1025)
T ss_pred             EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheee---cccCcEEEcccc
Confidence            9999999999999999875       458899999999999999999999999999999999999   566899999999


Q ss_pred             cceeccCCceeccc---ccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCC
Q 048594          165 LAFFFEEGKVYEEV---VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSD  240 (483)
Q Consensus       165 ~a~~~~~~~~~~~~---~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~  240 (483)
                      +|+.+-....+...   .-...|||||.+....|+.++|||||||++||+++ |..||.+.+..+.+.-...+. .++. 
T Consensus       848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~~-  925 (1025)
T KOG1095|consen  848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLDP-  925 (1025)
T ss_pred             hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccCC-
Confidence            99954433332221   22346999999998899999999999999999998 999999999988888666555 3332 


Q ss_pred             CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       241 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                       .+..|..+.+++..||+.+|.+||++..+++
T Consensus       926 -P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  926 -PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             -CCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence             3578899999999999999999999999987

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.3e-32  Score=245.58  Aligned_cols=223  Identities=28%  Similarity=0.420  Sum_probs=180.6

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-------------------CC------------------cCeE
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-------------------SD------------------EGYL   93 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------------------~~------------------~~~l   93 (483)
                      ....+.||.|+||+||.+.+..+|+.+|.|.+.....                   .+                  +.|+
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            4457889999999999999999999999998754210                   00                  1189


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ++|++.. +|..+|.....++...+.-+++||++||.|||+.+|.||||||.|.|+   +.+..+||||||+++.-....
T Consensus       135 ~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARvee~d~  210 (449)
T KOG0664|consen  135 LTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLARTWDQRD  210 (449)
T ss_pred             HHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEecccccccccchhh
Confidence            9999965 899999888899999999999999999999999999999999999999   788999999999998754322


Q ss_pred             --eecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHc------------------
Q 048594          174 --VYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS------------------  232 (483)
Q Consensus       174 --~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~------------------  232 (483)
                        .....+.|..|+|||++.+. .|+.+.||||+|||+.||+..+..|...+..+.++.|..                  
T Consensus       211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk  290 (449)
T KOG0664|consen  211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAK  290 (449)
T ss_pred             hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhH
Confidence              22334668899999998764 589999999999999999999999988877776666553                  


Q ss_pred             -----cccCCCCCC-------CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          233 -----REIDFKSDP-------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       233 -----~~~~~~~~~-------~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                           +....+..+       ...-.-+...++..+|.+||++|++.++++.|++..
T Consensus       291 ~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~  347 (449)
T KOG0664|consen  291 NHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLE  347 (449)
T ss_pred             HHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccc
Confidence                 111111100       011234678899999999999999999999999986

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.8e-30  Score=250.57  Aligned_cols=231  Identities=28%  Similarity=0.457  Sum_probs=174.4

Q ss_pred             ccccc-cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCC-----------------CCC--c-------------
Q 048594           44 YEDIK-LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS-----------------KSD--E-------------   90 (483)
Q Consensus        44 ~~~i~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~-----------------~~~--~-------------   90 (483)
                      .+.|. .||.+.++||=|-|++||+|.+..+.+.||+|+.+...                 ..+  .             
T Consensus        72 GD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F  151 (590)
T KOG1290|consen   72 GDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF  151 (590)
T ss_pred             cccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence            46677 89999999999999999999999999999999986532                 011  0             


Q ss_pred             ---------CeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCC-----
Q 048594           91 ---------GYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDD-----  153 (483)
Q Consensus        91 ---------~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~-----  153 (483)
                               .|+|+|++ |.+|+.+|...  ..++...++.|++|||.||.|||. .||+|.||||+|||+...+     
T Consensus       152 khsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~  230 (590)
T KOG1290|consen  152 KHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAK  230 (590)
T ss_pred             eecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhh
Confidence                     09999998 66899998754  569999999999999999999996 4899999999999984220     


Q ss_pred             --------------------------------------------------------------------------------
Q 048594          154 --------------------------------------------------------------------------------  153 (483)
Q Consensus       154 --------------------------------------------------------------------------------  153 (483)
                                                                                                      
T Consensus       231 ~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n  310 (590)
T KOG1290|consen  231 DAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRIN  310 (590)
T ss_pred             hhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCC
Confidence                                                                                            


Q ss_pred             ---------------------------C---------------------------------------------------C
Q 048594          154 ---------------------------E---------------------------------------------------N  155 (483)
Q Consensus       154 ---------------------------~---------------------------------------------------~  155 (483)
                                                 .                                                   .
T Consensus       311 ~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~d  390 (590)
T KOG1290|consen  311 GNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECD  390 (590)
T ss_pred             ccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccc
Confidence                                       0                                                   0


Q ss_pred             CcEEEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC------hHHHHHH
Q 048594          156 ATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES------LYGTLTA  229 (483)
Q Consensus       156 ~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~------~~~~~~~  229 (483)
                      ..|||+|||.|....  ..+...+.|..|+|||++.+..|+..+||||++|++|||+||...|....      +.+-+..
T Consensus       391 i~vKIaDlGNACW~~--khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~  468 (590)
T KOG1290|consen  391 IRVKIADLGNACWVH--KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIAL  468 (590)
T ss_pred             eeEEEeeccchhhhh--hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHH
Confidence            124555555554321  12334467888999999999999999999999999999999999884321      2222222


Q ss_pred             HHc------------cc-----------cCC--CCCCCC---------CC----CHHHHHHHHHhCccCCCCCCCHHHHH
Q 048594          230 IMS------------RE-----------IDF--KSDPWP---------TI----SSSAKDLIRRMLIRDPNNQITVAQIL  271 (483)
Q Consensus       230 i~~------------~~-----------~~~--~~~~~~---------~~----~~~~~~li~~~L~~dP~~R~t~~e~L  271 (483)
                      |+.            +.           +.-  ...+|+         .+    ..++.+|+.-||+.+|.+||||.++|
T Consensus       469 i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl  548 (590)
T KOG1290|consen  469 IMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL  548 (590)
T ss_pred             HHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHh
Confidence            221            10           000  011232         12    24578999999999999999999999


Q ss_pred             cCCcCC
Q 048594          272 KHPWLN  277 (483)
Q Consensus       272 ~h~~~~  277 (483)
                      +|||++
T Consensus       549 ~hPwLn  554 (590)
T KOG1290|consen  549 KHPWLN  554 (590)
T ss_pred             cCcccc
Confidence            999998

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=8e-31  Score=271.19  Aligned_cols=217  Identities=22%  Similarity=0.350  Sum_probs=184.5

Q ss_pred             cceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCCC-------------------------------CcCe
Q 048594           49 LHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSKS-------------------------------DEGY   92 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~-------------------------------~~~~   92 (483)
                      .+-.+.+.||+|+||.||+|+..     .....||||.++.....                               +..|
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~  565 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC  565 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence            45667889999999999999854     23467999999876533                               1119


Q ss_pred             EEEeccCCCChHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           93 LKREHCDGGTLVDRISDR--------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~--------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                      +|+|||..|+|.++|...              .+++..+...|+.||+.|+.||-++.+|||||-..|+|+   +++..|
T Consensus       566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV---ge~l~V  642 (774)
T KOG1026|consen  566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV---GENLVV  642 (774)
T ss_pred             EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee---ccceEE
Confidence            999999999999999643              238889999999999999999999999999999999999   788999


Q ss_pred             EEeecccceeccCCceecc---cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccc
Q 048594          159 KATDFGLAFFFEEGKVYEE---VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSRE  234 (483)
Q Consensus       159 kl~Dfg~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~  234 (483)
                      ||+|||+++..=....+..   ..-...|||||.+.-++|+.++||||+||+|||+++ |..||.+....+.++.|..+.
T Consensus       643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~  722 (774)
T KOG1026|consen  643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQ  722 (774)
T ss_pred             EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCC
Confidence            9999999986533332221   123556999999999899999999999999999998 999999999999999999988


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHH
Q 048594          235 IDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL  271 (483)
Q Consensus       235 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L  271 (483)
                      + ++.  ..+.|.++.+|+..||+.+|.+||++.|+-
T Consensus       723 l-L~~--Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  723 L-LSC--PENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             c-ccC--CCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            7 433  357899999999999999999999999873

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.97  E-value=3.4e-31  Score=271.64  Aligned_cols=221  Identities=29%  Similarity=0.421  Sum_probs=172.8

Q ss_pred             eEEeeeecccCcee-EEEEEECCCCCEEEEEEeccCCC----------------------------CCcCeEEEeccCCC
Q 048594           51 FTIAEELCRGESGR-IYLCTENSTGLQFACKSISKTSK----------------------------SDEGYLKREHCDGG  101 (483)
Q Consensus        51 y~~~~~lg~G~~g~-V~~~~~~~~~~~~avK~~~~~~~----------------------------~~~~~lv~E~~~g~  101 (483)
                      |.-.+++|.|+.|+ ||+|...  |+.||||++-....                            ....||..|+|.. 
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-  587 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-  587 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC--CceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-
Confidence            44467799999985 6999987  88999999855321                            1111999999976 


Q ss_pred             ChHHHHhcCCC----CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC--CCCcEEEeecccceeccCCce-
Q 048594          102 TLVDRISDRER----YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD--ENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus       102 ~L~~~l~~~~~----l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~--~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      +|.+++...+.    ......+.++.|+++||++||+.+||||||||.|||+...+  ....++|+|||++..+..+.. 
T Consensus       588 sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS  667 (903)
T KOG1027|consen  588 SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSS  667 (903)
T ss_pred             hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcch
Confidence            99999987411    12245688999999999999999999999999999998642  346899999999998865532 


Q ss_pred             ---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhC-CCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          175 ---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG-AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       175 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                         ..+..||-+|+|||++....-+.++||||+||++|+.++| .+||....  +...+|..+......-. +....++.
T Consensus       668 ~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~~~~~L~~L~-~~~d~eA~  744 (903)
T KOG1027|consen  668 FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILTGNYTLVHLE-PLPDCEAK  744 (903)
T ss_pred             hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH--HhhhhhhcCccceeeec-cCchHHHH
Confidence               3456799999999999987888899999999999999986 89995433  33345555554432211 11122899


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +||.+||+++|..||+|.++|.||+|.
T Consensus       745 dLI~~ml~~dP~~RPsa~~VL~HPlFW  771 (903)
T KOG1027|consen  745 DLISRMLNPDPQLRPSATDVLNHPLFW  771 (903)
T ss_pred             HHHHHhcCCCcccCCCHHHHhCCCccC
Confidence            999999999999999999999999997

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.96  E-value=2.2e-30  Score=259.42  Aligned_cols=229  Identities=23%  Similarity=0.386  Sum_probs=196.6

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc------------------------------CeEEE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------------------GYLKR   95 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~------------------------------~~lv~   95 (483)
                      +=+++|..+.++|+|+||.||+++++.+++..|+|+++.....+.                              .++.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            456789999999999999999999999999999999987653221                              19999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ce
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~  174 (483)
                      |||.||+|.+.-.-.+++++.++..+.+..+.||+|||+.|-+|||||-.|||+   ...+.+|+.|||.+..++.. ..
T Consensus        92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanill---td~gDvklaDfgvsaqitati~K  168 (829)
T KOG0576|consen   92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL---TDEGDVKLADFGVSAQITATIAK  168 (829)
T ss_pred             EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceee---cccCceeecccCchhhhhhhhhh
Confidence            999999999988888999999999999999999999999999999999999999   67889999999998776432 12


Q ss_pred             ecccccCCcccCcccc---CCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC-CCCCCCHHHH
Q 048594          175 YEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD-PWPTISSSAK  250 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~---~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~  250 (483)
                      .....|||.|||||+-   ..+.|+..+|+|++|+...+|-.-++|.........+.......+..+.. .....++.+-
T Consensus       169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh  248 (829)
T KOG0576|consen  169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFH  248 (829)
T ss_pred             hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHH
Confidence            3457899999999976   45579999999999999999999999988777777766666655543322 2235688899


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +|++.+|.++|++|||++.+|.|||+.
T Consensus       249 ~fvK~altknpKkRptaeklL~h~fvs  275 (829)
T KOG0576|consen  249 NFVKGALTKNPKKRPTAEKLLQHPFVS  275 (829)
T ss_pred             HHHHHHhcCCCccCCChhhheeceeec
Confidence            999999999999999999999999997

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.96  E-value=1.5e-29  Score=251.35  Aligned_cols=223  Identities=21%  Similarity=0.343  Sum_probs=181.9

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCC----CCEEEEEEeccCCCCCcC---------------------------
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENST----GLQFACKSISKTSKSDEG---------------------------   91 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~~avK~~~~~~~~~~~---------------------------   91 (483)
                      .++--++...+.+.||.|.||.||+|+....    .-.||||+.+.....+..                           
T Consensus       383 nyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e  462 (974)
T KOG4257|consen  383 NYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE  462 (974)
T ss_pred             cceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence            3444445566677899999999999986422    335889998775432221                           


Q ss_pred             ---eEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           92 ---YLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        92 ---~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                         +||||+++-|.|.++|+.+ ..++......++.||+.||.|||++++|||||-..|||+   .....|||+|||+++
T Consensus       463 ~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLV---sSp~CVKLaDFGLSR  539 (974)
T KOG4257|consen  463 QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILV---SSPQCVKLADFGLSR  539 (974)
T ss_pred             cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheee---cCcceeeecccchhh
Confidence               9999999999999999876 468899999999999999999999999999999999999   556689999999999


Q ss_pred             eccCCceeccccc--CCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCC
Q 048594          168 FFEEGKVYEEVVG--TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       168 ~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  244 (483)
                      .+.....+....|  ..-|||||.+.-..++.++|||-|||++||++. |..||.+-.+.+.+..|.++.-.   +..++
T Consensus       540 ~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRl---P~P~n  616 (974)
T KOG4257|consen  540 YLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERL---PCPPN  616 (974)
T ss_pred             hccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCC---CCCCC
Confidence            9877655544333  345999999998899999999999999999886 99999987777776666655432   22368


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCHHHHH
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITVAQIL  271 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~~e~L  271 (483)
                      .|+.+..++.+||..+|.+||...++.
T Consensus       617 CPp~LYslmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  617 CPPALYSLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             CChHHHHHHHHHhccCcccCCcHHHHH
Confidence            899999999999999999999886543

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.96  E-value=1.1e-29  Score=258.27  Aligned_cols=219  Identities=22%  Similarity=0.383  Sum_probs=188.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCC---CEEEEEEeccCCCCCcC-------------------------------eE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTG---LQFACKSISKTSKSDEG-------------------------------YL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~~avK~~~~~~~~~~~-------------------------------~l   93 (483)
                      ...-.+.++||.|.||.||+|.-+..|   ..||||.++....+...                               .|
T Consensus       628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMI  707 (996)
T KOG0196|consen  628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMI  707 (996)
T ss_pred             hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEE
Confidence            356778999999999999999988776   46999999876532221                               89


Q ss_pred             EEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |+|||++|+|..+|..+ +.++..+...+++-|+.|++||-..|+|||||-..|||+   +.+-.+|++|||+++.+.+.
T Consensus       708 iTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvledd  784 (996)
T KOG0196|consen  708 ITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDD  784 (996)
T ss_pred             EhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeecccC
Confidence            99999999999999765 789999999999999999999999999999999999999   78889999999999988654


Q ss_pred             c--eeccccc--CCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          173 K--VYEEVVG--TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       173 ~--~~~~~~g--t~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      .  .+.+.-|  ...|.|||.+...+++.++||||+|+++||.++ |..||+.-++++.++.|..+- .+  ++....|.
T Consensus       785 ~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gy-RL--PpPmDCP~  861 (996)
T KOG0196|consen  785 PEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGY-RL--PPPMDCPA  861 (996)
T ss_pred             CCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhcc-CC--CCCCCCcH
Confidence            3  1222222  346999999999999999999999999999876 999999999999999988763 22  33457899


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+.+|+..||++|-.+||+..|++.
T Consensus       862 aL~qLMldCWqkdR~~RP~F~qiV~  886 (996)
T KOG0196|consen  862 ALYQLMLDCWQKDRNRRPKFAQIVS  886 (996)
T ss_pred             HHHHHHHHHHHHHhhcCCCHHHHHH
Confidence            9999999999999999999999876

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1e-28  Score=245.06  Aligned_cols=215  Identities=20%  Similarity=0.338  Sum_probs=179.4

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEeccCC
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKREHCDG  100 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E~~~g  100 (483)
                      +......||-|.||.||.|.+++..-.||||.++.....                             ...|||+|||..
T Consensus       268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y  347 (1157)
T KOG4278|consen  268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY  347 (1157)
T ss_pred             heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence            445567899999999999999999999999999765421                             122999999999


Q ss_pred             CChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceeccc
Q 048594          101 GTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV  178 (483)
Q Consensus       101 ~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~  178 (483)
                      |+|++||.++.  .++-.....++.||.+|+.||..+++|||||-..|+|+   +++..||++|||+++.+.... +...
T Consensus       348 GNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV---gEnhiVKvADFGLsRlMtgDT-YTAH  423 (1157)
T KOG4278|consen  348 GNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHIVKVADFGLSRLMTGDT-YTAH  423 (1157)
T ss_pred             ccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc---cccceEEeeccchhhhhcCCc-eecc
Confidence            99999998763  46667788999999999999999999999999999999   788899999999999886443 3333


Q ss_pred             cc---CCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          179 VG---TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       179 ~g---t~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .|   ..-|.|||-+.-..++.++|||+|||+|||+.| |-.||.+-+..+.+..+.+ .+.+..  ....|+.+.+|+.
T Consensus       424 AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEk-gyRM~~--PeGCPpkVYeLMr  500 (1157)
T KOG4278|consen  424 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEK-GYRMDG--PEGCPPKVYELMR  500 (1157)
T ss_pred             cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhc-cccccC--CCCCCHHHHHHHH
Confidence            34   335999999988889999999999999999997 8889988776666555444 344433  3578999999999


Q ss_pred             HhCccCCCCCCCHHHHH
Q 048594          255 RMLIRDPNNQITVAQIL  271 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L  271 (483)
                      .||++.|..||+++|+-
T Consensus       501 aCW~WsPsDRPsFaeiH  517 (1157)
T KOG4278|consen  501 ACWNWSPSDRPSFAEIH  517 (1157)
T ss_pred             HHhcCCcccCccHHHHH
Confidence            99999999999999873

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.96  E-value=1.4e-28  Score=278.15  Aligned_cols=219  Identities=22%  Similarity=0.275  Sum_probs=163.4

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------CcCeEEEecc
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------DEGYLKREHC   98 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------~~~~lv~E~~   98 (483)
                      +++...|...++||+|+||.||+|.++.+|..||||.+......                          ...|+|||||
T Consensus       686 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~  765 (968)
T PLN00113        686 NDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI  765 (968)
T ss_pred             HHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence            34455677888999999999999999999999999998654311                          1129999999


Q ss_pred             CCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           99 DGGTLVDRISDRERYTERAAASVFRSVVNALHACH---SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        99 ~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      ++|+|.+++.   .+++..+..++.||+.||+|||   +.+|+||||||+||++   +.....++. ++.+......   
T Consensus       766 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~---~~~~~~~~~-~~~~~~~~~~---  835 (968)
T PLN00113        766 EGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII---DGKDEPHLR-LSLPGLLCTD---  835 (968)
T ss_pred             CCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE---CCCCceEEE-eccccccccC---
Confidence            9999999995   4889999999999999999999   6699999999999999   444555554 5544332211   


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh--HHHHH--H-HH---------ccccCCCCCC
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL--YGTLT--A-IM---------SREIDFKSDP  241 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~--~~~~~--~-i~---------~~~~~~~~~~  241 (483)
                      ....+++.|+|||++.+..++.++||||+||++|||++|+.||.....  .....  . ..         ..........
T Consensus       836 ~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  915 (968)
T PLN00113        836 TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSV  915 (968)
T ss_pred             CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCc
Confidence            233678999999999988899999999999999999999999854221  01111  0 00         0000000000


Q ss_pred             CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          242 WPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       242 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .+....++.+++.+||+.+|.+|||+.|+++.
T Consensus       916 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        916 NQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             cHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            00112356789999999999999999999874

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=8e-29  Score=224.35  Aligned_cols=228  Identities=24%  Similarity=0.354  Sum_probs=178.4

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeE
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYL   93 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~l   93 (483)
                      -++.+.|.+.+.||+|.||.+.+|.|+.++..+++|.+++....                               +...+
T Consensus        20 v~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF   99 (378)
T KOG1345|consen   20 VDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF   99 (378)
T ss_pred             cchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence            46788999999999999999999999999999999999886521                               11178


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ++|||+-|+|.+-+... .+-|.....++.|+++|+.|+|++++||||||.+|||+...+. .+|||||||.++..+.. 
T Consensus       100 ~qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df-~rvKlcDFG~t~k~g~t-  176 (378)
T KOG1345|consen  100 VQEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADF-YRVKLCDFGLTRKVGTT-  176 (378)
T ss_pred             eeccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCc-cEEEeeecccccccCce-
Confidence            99999999999988664 5788999999999999999999999999999999999986543 48999999999875432 


Q ss_pred             eecccccCCcccCccccCC---CC--CCCcCchHHHHHHHHHHhhCCCCCCCCC-----hHHHHHHHHccccCCCCCCCC
Q 048594          174 VYEEVVGTPLYMAPELLGP---CK--YGKEIDIWSAGLILYNLLSGAQPFWAES-----LYGTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~---~~--~~~~~DiwslGvil~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~  243 (483)
                       ....--+..|.+||++..   ..  ..+.+|+|.+|+++|.+++|.+||....     ......-..+... -.+..+.
T Consensus       177 -V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~-~~P~~F~  254 (378)
T KOG1345|consen  177 -VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP-ALPKKFN  254 (378)
T ss_pred             -ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc-cCchhhc
Confidence             222234567999997742   22  3688999999999999999999996422     1222222222222 2333455


Q ss_pred             CCCHHHHHHHHHhCccCCCCC---CCHHHHHcCCcCC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQ---ITVAQILKHPWLN  277 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R---~t~~e~L~h~~~~  277 (483)
                      .+++.+..+.++-|.++|+.|   .+++......|..
T Consensus       255 ~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  255 PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             ccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence            688999999999999999999   6666666667764

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.95  E-value=2.3e-28  Score=213.26  Aligned_cols=183  Identities=26%  Similarity=0.382  Sum_probs=153.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------CeEEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GYLKR   95 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~lv~   95 (483)
                      .+....+..||+|++|.|=+.+|..+|...|+|.+...-....                                .+|.|
T Consensus        45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM  124 (282)
T KOG0984|consen   45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM  124 (282)
T ss_pred             hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence            4566678889999999999999999999999999977542211                                18888


Q ss_pred             eccCCCChHH----HHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           96 EHCDGGTLVD----RISDRERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        96 E~~~g~~L~~----~l~~~~~l~~~~~~~i~~qil~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      |.++. +|..    .+...+.++|..+-+++..++.||.|||++ .++|||+||.|||+   +..|+||+||||.+..+.
T Consensus       125 E~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~L~  200 (282)
T KOG0984|consen  125 ELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGISGYLV  200 (282)
T ss_pred             HHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEcccccceeeh
Confidence            98865 5544    345568899999999999999999999975 89999999999999   788999999999999887


Q ss_pred             CCceecccccCCcccCccccC----CCCCCCcCchHHHHHHHHHHhhCCCCCCC-CChHHHHHHHHccc
Q 048594          171 EGKVYEEVVGTPLYMAPELLG----PCKYGKEIDIWSAGLILYNLLSGAQPFWA-ESLYGTLTAIMSRE  234 (483)
Q Consensus       171 ~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DiwslGvil~~ll~g~~pf~~-~~~~~~~~~i~~~~  234 (483)
                      ++-..+...|...|||||.+.    +..|+-++||||||++++||.+++.||.. .+..++++++....
T Consensus       201 dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep  269 (282)
T KOG0984|consen  201 DSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEP  269 (282)
T ss_pred             hhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCC
Confidence            665555567888999999874    34688999999999999999999999965 46677788877654

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=1.6e-28  Score=246.92  Aligned_cols=221  Identities=20%  Similarity=0.263  Sum_probs=182.9

Q ss_pred             cceEEeeeecccCceeEEEEEECCCC---CEEEEEEeccCCCCCcC------------------------------eEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTG---LQFACKSISKTSKSDEG------------------------------YLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~---~~~avK~~~~~~~~~~~------------------------------~lv~   95 (483)
                      +...+.+.||+|.||+|++|.+...+   ..||||.+.........                              .+|+
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~  189 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVF  189 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHh
Confidence            34567889999999999999987543   35899999876533111                              6789


Q ss_pred             eccCCCChHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           96 EHCDGGTLVDRISD--RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~--~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |+|++|+|+++|..  ...|.......++.||+.|+.||.++++|||||-..|+|+.   ....|||+|||+.+.+..+.
T Consensus       190 ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla---sprtVKI~DFGLmRaLg~ne  266 (1039)
T KOG0199|consen  190 ELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA---SPRTVKICDFGLMRALGENE  266 (1039)
T ss_pred             hhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec---ccceeeeecccceeccCCCC
Confidence            99999999999986  34688888999999999999999999999999999999995   45689999999999887554


Q ss_pred             eecc----cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          174 VYEE----VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       174 ~~~~----~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      ..-.    ..-...|+|||.+....++.++|||++||++|||++ |..||.|......+++|..+. .++.+  +..|..
T Consensus       267 d~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~e-rLpRP--k~csed  343 (1039)
T KOG0199|consen  267 DMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGE-RLPRP--KYCSED  343 (1039)
T ss_pred             cceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccc-cCCCC--CCChHH
Confidence            3221    123446999999999999999999999999999998 889999999999999988443 23322  357889


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHcCCc
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILKHPW  275 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~h~~  275 (483)
                      +.+++..||..+|..|||+..+...-+
T Consensus       344 IY~imk~cWah~paDRptFsair~~~~  370 (1039)
T KOG0199|consen  344 IYQIMKNCWAHNPADRPTFSAIREDLV  370 (1039)
T ss_pred             HHHHHHHhccCCccccccHHHHHHhHH
Confidence            999999999999999999998864433

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.95  E-value=9.5e-29  Score=237.01  Aligned_cols=231  Identities=29%  Similarity=0.453  Sum_probs=175.7

Q ss_pred             ccccccccceEEeeeecccCceeEEEEEECC---CCCEEEEEEeccCCCCC-----------------------------
Q 048594           42 KAYEDIKLHFTIAEELCRGESGRIYLCTENS---TGLQFACKSISKTSKSD-----------------------------   89 (483)
Q Consensus        42 ~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~-----------------------------   89 (483)
                      +..-.+.+.|.++..||.|+|++||++.+..   .++.||+|.+.......                             
T Consensus        29 q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   29 QDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence            3345677889999999999999999999887   78899999997765322                             


Q ss_pred             cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           90 EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ...+|+||++.....++..   .++...++.+++.++.||.++|++|||||||||.|+|+..  ..+.-.|+|||+|...
T Consensus       109 ~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~--~t~rg~LvDFgLA~~~  183 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR--RTQRGVLVDFGLAQRY  183 (418)
T ss_pred             eeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc--ccCCceEEechhHHHH
Confidence            2289999999887777764   4678999999999999999999999999999999999963  4567799999998621


Q ss_pred             c-----------------C--Cc---------------ee-----------cccccCCcccCccccCCCC-CCCcCchHH
Q 048594          170 E-----------------E--GK---------------VY-----------EEVVGTPLYMAPELLGPCK-YGKEIDIWS  203 (483)
Q Consensus       170 ~-----------------~--~~---------------~~-----------~~~~gt~~y~aPE~~~~~~-~~~~~Diws  203 (483)
                      .                 +  +.               ..           -...||++|+|||++...+ -+.++||||
T Consensus       184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws  263 (418)
T KOG1167|consen  184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS  263 (418)
T ss_pred             HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence            0                 0  00               00           0136999999999986543 588999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCh-HHHHHHHH--------------ccc--c-----------------CC------------
Q 048594          204 AGLILYNLLSGAQPFWAESL-YGTLTAIM--------------SRE--I-----------------DF------------  237 (483)
Q Consensus       204 lGvil~~ll~g~~pf~~~~~-~~~~~~i~--------------~~~--~-----------------~~------------  237 (483)
                      .|||+.-++++..||..... ...+..|.              .+.  +                 ..            
T Consensus       264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n  343 (418)
T KOG1167|consen  264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN  343 (418)
T ss_pred             ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence            99999999999999954321 11111110              000  0                 00            


Q ss_pred             -CCCCC-CCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          238 -KSDPW-PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       238 -~~~~~-~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                       ....+ ...+..+.+|+.+||..||.+|+|++++|+||||.
T Consensus       344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~  385 (418)
T KOG1167|consen  344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFD  385 (418)
T ss_pred             eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCc
Confidence             00001 12456889999999999999999999999999998

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.95  E-value=3.8e-28  Score=267.97  Aligned_cols=182  Identities=19%  Similarity=0.245  Sum_probs=138.3

Q ss_pred             CeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC----------------C
Q 048594           91 GYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD----------------D  153 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~----------------~  153 (483)
                      .+.++|++ +++|.++|... ..+++..+..+++||+.||.|||++||+||||||+|||+...                +
T Consensus        55 ~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~  133 (793)
T PLN00181         55 IVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD  133 (793)
T ss_pred             hhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccccc
Confidence            46778877 55999999753 569999999999999999999999999999999999999421                2


Q ss_pred             CCCcEEEeecccceeccCCc-----------------eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCC
Q 048594          154 ENATLKATDFGLAFFFEEGK-----------------VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQ  216 (483)
Q Consensus       154 ~~~~ikl~Dfg~a~~~~~~~-----------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~  216 (483)
                      ..+.+|++|||+++......                 .....+||++|+|||++.+..++.++|||||||++|||++|.+
T Consensus       134 ~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~  213 (793)
T PLN00181        134 EDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVS  213 (793)
T ss_pred             ccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCC
Confidence            34567888888876422100                 0012468899999999998899999999999999999999998


Q ss_pred             CCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          217 PFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       217 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      |+....  .....+.....  +. .+....+...+++.+||+++|.+|||+.|+|+||||..
T Consensus       214 ~~~~~~--~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        214 SREEKS--RTMSSLRHRVL--PP-QILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE  270 (793)
T ss_pred             chhhHH--HHHHHHHHhhc--Ch-hhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence            875322  12222222111  11 11122456789999999999999999999999999973

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.94  E-value=1.2e-27  Score=236.19  Aligned_cols=167  Identities=36%  Similarity=0.596  Sum_probs=149.8

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------------------
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------------------   88 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------------------   88 (483)
                      +|..++.||.|+||.|++|+++.....|+||.|.+...-                                         
T Consensus       562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd  641 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD  641 (772)
T ss_pred             cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence            599999999999999999999999999999999886510                                         


Q ss_pred             CcCeEEEec-cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           89 DEGYLKREH-CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        89 ~~~~lv~E~-~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                      +..||+||- -+|.+|+++|.-...++|.++..|++|++.|+++||+.||||||||-+|+.+   +.+|.+||+|||.|.
T Consensus       642 d~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgsaa  718 (772)
T KOG1152|consen  642 DYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGSAA  718 (772)
T ss_pred             CeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccchh
Confidence            011888884 4677999999999999999999999999999999999999999999999999   788999999999987


Q ss_pred             eccCCceecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCC
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWA  220 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~  220 (483)
                      ....+ +....+||..|.|||++.+.+| +...||||+|++||.+.....||+.
T Consensus       719 ~~ksg-pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  719 YTKSG-PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             hhcCC-CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            65544 4567899999999999999888 7889999999999999999999864

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=9.7e-27  Score=224.02  Aligned_cols=221  Identities=23%  Similarity=0.365  Sum_probs=170.3

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC---------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG---------------------------------   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~---------------------------------   91 (483)
                      ..+..+-.+.+.||+|.||.||+|..+  |..||||++...+.....                                 
T Consensus       207 RTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL  284 (513)
T KOG2052|consen  207 RTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL  284 (513)
T ss_pred             HhhhheeEEEEEecCccccceeecccc--CCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence            356778899999999999999999998  899999999876532211                                 


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeeeCCCCCeEEEeeCCCCCcEEEeec
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN--------GIMHRDLKPENFIFTTDDENATLKATDF  163 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~--------~ivH~dlkp~NIll~~~~~~~~ikl~Df  163 (483)
                      +||++|-+.|+|.|+|.. .+++.....+++..+++||+|||..        .|.|||||..|||+   ..++.+-|+|+
T Consensus       285 wLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV---Kkn~~C~IADL  360 (513)
T KOG2052|consen  285 WLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADL  360 (513)
T ss_pred             EEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE---ccCCcEEEeec
Confidence            999999999999999988 5899999999999999999999964        49999999999999   68889999999


Q ss_pred             ccceeccCCc-----eecccccCCcccCccccCCC----CC--CCcCchHHHHHHHHHHhh----------CCCCCCCC-
Q 048594          164 GLAFFFEEGK-----VYEEVVGTPLYMAPELLGPC----KY--GKEIDIWSAGLILYNLLS----------GAQPFWAE-  221 (483)
Q Consensus       164 g~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~----~~--~~~~DiwslGvil~~ll~----------g~~pf~~~-  221 (483)
                      |+|.......     ..+..+||..|||||++...    .+  -..+||||+|+++||++.          -++||++- 
T Consensus       361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V  440 (513)
T KOG2052|consen  361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV  440 (513)
T ss_pred             eeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence            9998765431     23457899999999999542    12  246899999999999974          25788652 


Q ss_pred             ----ChHHHHHHHHccccCCC-CCCCCCCC--HHHHHHHHHhCccCCCCCCCHHHHH
Q 048594          222 ----SLYGTLTAIMSREIDFK-SDPWPTIS--SSAKDLIRRMLIRDPNNQITVAQIL  271 (483)
Q Consensus       222 ----~~~~~~~~i~~~~~~~~-~~~~~~~~--~~~~~li~~~L~~dP~~R~t~~e~L  271 (483)
                          +..++.+-+--..+..+ ++.|...+  ..+-.+++.||..+|.-|.|+-.+.
T Consensus       441 p~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  441 PSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             CCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence                23333333322222221 22233222  2356778899999999999886543

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.94  E-value=2.9e-27  Score=233.78  Aligned_cols=225  Identities=20%  Similarity=0.273  Sum_probs=179.1

Q ss_pred             cccc-ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------C
Q 048594           44 YEDI-KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------G   91 (483)
Q Consensus        44 ~~~i-~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~   91 (483)
                      ..+| ++...+.+.||+|.||.|.+|.-.. +..||||.++.....+.                               .
T Consensus       532 l~EfPRs~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePi  610 (807)
T KOG1094|consen  532 LVEFPRSRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPL  610 (807)
T ss_pred             hhhcchhheehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCch
Confidence            3444 3577889999999999999998663 68999999987653322                               2


Q ss_pred             eEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           92 YLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ++|+||++.|+|.+++..+  ....-+....++.||++|++||.+.++|||||.+.|+|+   +.++++||+|||+++.+
T Consensus       611 cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~l  687 (807)
T KOG1094|consen  611 CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNL  687 (807)
T ss_pred             HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCccccccc
Confidence            8999999999999999877  333445566799999999999999999999999999999   78999999999999976


Q ss_pred             cCCceecc---cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh--CCCCCCCCChHHHHHHHHccccCCC----CC
Q 048594          170 EEGKVYEE---VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS--GAQPFWAESLYGTLTAIMSREIDFK----SD  240 (483)
Q Consensus       170 ~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~--g~~pf~~~~~~~~~~~i~~~~~~~~----~~  240 (483)
                      -.+..+..   .+-...|||||.+.-++++.++|+|++||++||+++  ...||......+..++...-.....    ..
T Consensus       688 ysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~  767 (807)
T KOG1094|consen  688 YSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLS  767 (807)
T ss_pred             ccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceecc
Confidence            54443322   244567999998887899999999999999999875  7889987777666665432111110    11


Q ss_pred             CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       241 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ..+-.|..+.+++.+||..+-.+|||.+++..
T Consensus       768 ~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  768 RPPACPQGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             CCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence            12457889999999999999999999999843

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.94  E-value=5.6e-27  Score=211.28  Aligned_cols=162  Identities=23%  Similarity=0.290  Sum_probs=130.0

Q ss_pred             CChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccc
Q 048594          101 GTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV  179 (483)
Q Consensus       101 ~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~  179 (483)
                      |+|.+++... .++++..++.++.||+.||.|||+++      ||+||++   +.++.+++  ||.+......    ...
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~----~~~   65 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPE----QSR   65 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeeccc----cCC
Confidence            5899999864 56999999999999999999999998      9999999   66778888  9998875432    236


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHccccCCCCC---CCCCCCH--HHHHHH
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY-GTLTAIMSREIDFKSD---PWPTISS--SAKDLI  253 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~---~~~~~~~--~~~~li  253 (483)
                      |++.|+|||++.+..++.++||||+||++|+|++|..||...... ..+..+..........   ....++.  ++.++|
T Consensus        66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  145 (176)
T smart00750       66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM  145 (176)
T ss_pred             CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence            899999999999989999999999999999999999999765432 3333333322221111   1112333  699999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcCC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+||..+|.+|||+.+++.|+|+.
T Consensus       146 ~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      146 RVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHhcccccccCHHHHHHHHHHH
Confidence            999999999999999999999986

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=5.6e-26  Score=241.82  Aligned_cols=217  Identities=22%  Similarity=0.334  Sum_probs=175.2

Q ss_pred             ceEEeeeecccCceeEEEEEEC----C---CCCEEEEEEeccCCCCCc--------------------------------
Q 048594           50 HFTIAEELCRGESGRIYLCTEN----S---TGLQFACKSISKTSKSDE--------------------------------   90 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~----~---~~~~~avK~~~~~~~~~~--------------------------------   90 (483)
                      ...+.+.||+|.||.|++|.-+    .   ....||||.++......+                                
T Consensus       297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~  376 (609)
T KOG0200|consen  297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGP  376 (609)
T ss_pred             hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCc
Confidence            3456679999999999999743    1   145799999987654311                                


Q ss_pred             CeEEEeccCCCChHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCC
Q 048594           91 GYLKREHCDGGTLVDRISDRE----------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE  154 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~  154 (483)
                      .++|+|||..|+|.+++..++                .++......+++||+.|++||++..++||||-+.|||+   ..
T Consensus       377 ~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi---~~  453 (609)
T KOG0200|consen  377 LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI---TK  453 (609)
T ss_pred             eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe---cC
Confidence            199999999999999998765                38889999999999999999999999999999999999   56


Q ss_pred             CCcEEEeecccceeccCCceeccc--cc--CCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCC-hHHHHH
Q 048594          155 NATLKATDFGLAFFFEEGKVYEEV--VG--TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAES-LYGTLT  228 (483)
Q Consensus       155 ~~~ikl~Dfg~a~~~~~~~~~~~~--~g--t~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~-~~~~~~  228 (483)
                      +..+|++|||+|+.......+...  .+  ...|||||.+....|+.++||||+||+|||+++ |..||.+-. ..+.++
T Consensus       454 ~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~  533 (609)
T KOG0200|consen  454 NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLE  533 (609)
T ss_pred             CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH
Confidence            679999999999966554444322  22  234999999999899999999999999999998 889998744 455555


Q ss_pred             HHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          229 AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       229 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+..+.. ...  ....+.++.+++..||+.+|.+||+..++..
T Consensus       534 ~l~~G~r-~~~--P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  534 FLKEGNR-MEQ--PEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             HHhcCCC-CCC--CCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            4544432 222  2356899999999999999999999999866

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=1.2e-26  Score=225.05  Aligned_cols=213  Identities=25%  Similarity=0.343  Sum_probs=162.9

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEEe
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKRE   96 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~E   96 (483)
                      ...+++.+|+|.||.||+|...  ++.||||+++....                                 ..+.+||+|
T Consensus       211 pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~  288 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE  288 (534)
T ss_pred             chhhHHHhhcCccceeehhhcc--CceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence            4556888999999999999866  68999999975431                                 112289999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN---------GIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~---------~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                      |-+.|+|.++|..+ .+++....+++..|++||+|||..         .|+|||||..|||+   .++....|+|||+|.
T Consensus       289 fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTccIaDFGLAl  364 (534)
T KOG3653|consen  289 FHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCCIADFGLAL  364 (534)
T ss_pred             eccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEEeeccceeE
Confidence            99999999999876 899999999999999999999974         59999999999999   677899999999999


Q ss_pred             eccCCce---ecccccCCcccCccccCCCC-C-----CCcCchHHHHHHHHHHhhCCCCCC-C----------------C
Q 048594          168 FFEEGKV---YEEVVGTPLYMAPELLGPCK-Y-----GKEIDIWSAGLILYNLLSGAQPFW-A----------------E  221 (483)
Q Consensus       168 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~-~-----~~~~DiwslGvil~~ll~g~~pf~-~----------------~  221 (483)
                      .+.++..   ....+||..|||||++.+.- +     -.+.||||+|.++||+++...-+. +                .
T Consensus       365 ~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hP  444 (534)
T KOG3653|consen  365 RLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHP  444 (534)
T ss_pred             EecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCC
Confidence            8875432   33478999999999997621 1     146899999999999998544332 1                1


Q ss_pred             ChHHHHHHHHccccCC-CCCCCC--CCCHHHHHHHHHhCccCCCCCCCHH
Q 048594          222 SLYGTLTAIMSREIDF-KSDPWP--TISSSAKDLIRRMLIRDPNNQITVA  268 (483)
Q Consensus       222 ~~~~~~~~i~~~~~~~-~~~~~~--~~~~~~~~li~~~L~~dP~~R~t~~  268 (483)
                      ...++...+.+..... .+..|.  .....+++.+.-||..||+.|+|+.
T Consensus       445 t~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  445 TLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             CHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence            1233333333322211 111121  1235689999999999999999985

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=5.2e-26  Score=232.48  Aligned_cols=216  Identities=19%  Similarity=0.290  Sum_probs=177.3

Q ss_pred             eEEeeeecccCceeEEEEEECCCC----CEEEEEEeccCCCCCcC------------------------------eEEEe
Q 048594           51 FTIAEELCRGESGRIYLCTENSTG----LQFACKSISKTSKSDEG------------------------------YLKRE   96 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~----~~~avK~~~~~~~~~~~------------------------------~lv~E   96 (483)
                      .+..++||+|+||+||+|..--.|    -+||+|++.........                              -||++
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq  777 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQ  777 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHH
Confidence            445788999999999999875444    46899998765422111                              68999


Q ss_pred             ccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           97 HCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      |+++|+|.+++..+ .++-......|..||++|+.|||.+++|||||-..|+|+   .....+|+.|||+++.+.+... 
T Consensus       778 ~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV---ksP~hvkitdfgla~ll~~d~~e  854 (1177)
T KOG1025|consen  778 LMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV---KSPNHVKITDFGLAKLLAPDEKE  854 (1177)
T ss_pred             hcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee---cCCCeEEEEecchhhccCccccc
Confidence            99999999999865 578888999999999999999999999999999999999   5667899999999998865432 


Q ss_pred             eccc--ccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          175 YEEV--VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       175 ~~~~--~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      +...  .-.+-|||-|.+....|+.++||||+||++||++| |..|+.+....+.-+.+..+.- ++  ..|..+.++.-
T Consensus       855 y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-Ls--qPpiCtiDVy~  931 (1177)
T KOG1025|consen  855 YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-LS--QPPICTIDVYM  931 (1177)
T ss_pred             ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-CC--CCCCccHHHHH
Confidence            2222  22445999999998899999999999999999998 9999999887777666655543 33  23578899999


Q ss_pred             HHHHhCccCCCCCCCHHHHHc
Q 048594          252 LIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ++.+||..|+..||+++++..
T Consensus       932 ~mvkCwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  932 VMVKCWMIDADSRPTFKELAE  952 (1177)
T ss_pred             HHHHHhccCcccCccHHHHHH
Confidence            999999999999999988654

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.93  E-value=2.6e-25  Score=204.29  Aligned_cols=180  Identities=41%  Similarity=0.718  Sum_probs=157.1

Q ss_pred             ecccCceeEEEEEECCCCCEEEEEEeccCCCC---C----------------------------cCeEEEeccCCCChHH
Q 048594           57 LCRGESGRIYLCTENSTGLQFACKSISKTSKS---D----------------------------EGYLKREHCDGGTLVD  105 (483)
Q Consensus        57 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~----------------------------~~~lv~E~~~g~~L~~  105 (483)
                      ||.|++|.||+|....+|+.+++|++......   .                            ..++++|++.|++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            68999999999999988999999999877542   0                            0199999999999999


Q ss_pred             HHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCC-CCcEEEeecccceeccCCc-eecccccCC
Q 048594          106 RISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE-NATLKATDFGLAFFFEEGK-VYEEVVGTP  182 (483)
Q Consensus       106 ~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~-~~~ikl~Dfg~a~~~~~~~-~~~~~~gt~  182 (483)
                      ++... ..+++..+..++.+++.++.+||+.+++|+||+|.||++.   . .+.++|+|||.+....... ......+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  157 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLD---SDNGKVKLADFGLSKLLTSDKSLLKTIVGTP  157 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEe---CCCCcEEEecCCceEEccCCcchhhcccCCC
Confidence            99876 5789999999999999999999999999999999999994   4 6789999999998765432 123355788


Q ss_pred             cccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCC
Q 048594          183 LYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP  261 (483)
Q Consensus       183 ~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  261 (483)
                      .|++||.+... .++.+.|+|++|++++++                                   ..+.+++.+||..+|
T Consensus       158 ~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------~~~~~~l~~~l~~~p  202 (215)
T cd00180         158 AYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------PELKDLIRKMLQKDP  202 (215)
T ss_pred             CccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------HHHHHHHHHHhhCCc
Confidence            89999999876 778999999999999999                                   578999999999999


Q ss_pred             CCCCCHHHHHcCC
Q 048594          262 NNQITVAQILKHP  274 (483)
Q Consensus       262 ~~R~t~~e~L~h~  274 (483)
                      .+||++.++++|+
T Consensus       203 ~~R~~~~~l~~~~  215 (215)
T cd00180         203 EKRPSAKEILEHL  215 (215)
T ss_pred             ccCcCHHHHhhCC
Confidence            9999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.92  E-value=1.6e-24  Score=202.26  Aligned_cols=181  Identities=37%  Similarity=0.644  Sum_probs=152.8

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeEEEeccC
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYLKREHCD   99 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E~~~   99 (483)
                      |.+.+.||.|++|.||+|.+..+++.+|+|.+......                               ...++++|++.
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            67789999999999999999988999999999865321                               11189999999


Q ss_pred             CCChHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--eec
Q 048594          100 GGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--VYE  176 (483)
Q Consensus       100 g~~L~~~l~~~~~-l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--~~~  176 (483)
                      +++|.+++..... +++..+..++.+++.++.+||+.+++|+||+|.||++   +.++.++|+|||.+.......  ...
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v---~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (225)
T smart00221       81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILL---GMDGLVKLADFGLARFIHRDLAALLK  157 (225)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeeCceeeEecCccccccc
Confidence            9999999988766 8999999999999999999999999999999999999   556899999999998765442  334


Q ss_pred             ccccCCcccCcccc-CCCCCCCcCchHHHHHHHHHHhhCCCCCCC-CChH-HHHHHHHccc
Q 048594          177 EVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWA-ESLY-GTLTAIMSRE  234 (483)
Q Consensus       177 ~~~gt~~y~aPE~~-~~~~~~~~~DiwslGvil~~ll~g~~pf~~-~~~~-~~~~~i~~~~  234 (483)
                      ...++..|++||.+ ....++.++|+|++|+++++|++|+.||.. .+.. .+.+.+..+.
T Consensus       158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~  218 (225)
T smart00221      158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV  218 (225)
T ss_pred             ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence            45678889999998 666778899999999999999999999977 3443 5555555543

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=5e-25  Score=231.79  Aligned_cols=226  Identities=27%  Similarity=0.409  Sum_probs=177.0

Q ss_pred             ccce-EEeeeecccCceeEEEEEECCCCCEEEEEEeccC----CCC--------------------------------Cc
Q 048594           48 KLHF-TIAEELCRGESGRIYLCTENSTGLQFACKSISKT----SKS--------------------------------DE   90 (483)
Q Consensus        48 ~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~----~~~--------------------------------~~   90 (483)
                      ...| ....++|.|++|.|+.+........++.|.+...    ...                                ..
T Consensus       316 ~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~  395 (601)
T KOG0590|consen  316 SEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG  395 (601)
T ss_pred             ccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc
Confidence            3445 5688899999998888888777766766655421    100                                00


Q ss_pred             CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           91 GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      .+-+||||++ +|..++...+.++...+..+++|++.||+|+|..||.|||+||+|+++   ..++.+||+|||.+....
T Consensus       396 ~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~---~~~g~lki~Dfg~~~vf~  471 (601)
T KOG0590|consen  396 ILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLV---TENGILKIIDFGAASVFR  471 (601)
T ss_pred             chhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEE---ecCCceEEeecCcceeec
Confidence            0445899999 999999988889999999999999999999999999999999999999   567799999999987654


Q ss_pred             CCc-----eecccccCCcccCccccCCCCCC-CcCchHHHHHHHHHHhhCCCCCCCCChHHHH--HHHH---ccccCCCC
Q 048594          171 EGK-----VYEEVVGTPLYMAPELLGPCKYG-KEIDIWSAGLILYNLLSGAQPFWAESLYGTL--TAIM---SREIDFKS  239 (483)
Q Consensus       171 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~~ll~g~~pf~~~~~~~~~--~~i~---~~~~~~~~  239 (483)
                      .+.     .....+|+..|+|||++.+..|. ...||||.|++++.|.+|+.||......+..  ....   .....-+.
T Consensus       472 ~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~  551 (601)
T KOG0590|consen  472 YPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPN  551 (601)
T ss_pred             cCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChH
Confidence            322     23456899999999999998886 4899999999999999999999654433221  1111   11111122


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ..+..++...+.+|.+||+++|.+|.|++++++.+||+
T Consensus       552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~  589 (601)
T KOG0590|consen  552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIR  589 (601)
T ss_pred             HHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhh
Confidence            23345788899999999999999999999999999998

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.90  E-value=8.2e-24  Score=222.68  Aligned_cols=220  Identities=27%  Similarity=0.469  Sum_probs=179.7

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-------CCcCeEEEeccCCCChHHHHhcCCCCCHH
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-------SDEGYLKREHCDGGTLVDRISDRERYTER  116 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~~lv~E~~~g~~L~~~l~~~~~l~~~  116 (483)
                      ......+|..++.+..|+||.||.++|+.+.+.+|+|+=+....       .+..++|      |+=...++..++++..
T Consensus        78 ~~p~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~lilRnilt~a~npfvv------gDc~tllk~~g~lPvd  151 (1205)
T KOG0606|consen   78 RAPSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNLILRNILTFAGNPFVV------GDCATLLKNIGPLPVD  151 (1205)
T ss_pred             cCCCccccceeEeeccCCCCceeeeeccccccchhhcccccchhhhccccccCCccee------chhhhhcccCCCCcch
Confidence            34667899999999999999999999999999999954332221       1122444      3444556666666654


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC---c-------------eeccccc
Q 048594          117 AAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG---K-------------VYEEVVG  180 (483)
Q Consensus       117 ~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~---~-------------~~~~~~g  180 (483)
                      .        +.+++|||+.+|+|||+||+|.++   ...|.+|++|||++...-..   .             .....||
T Consensus       152 m--------vla~Eylh~ygivhrdlkpdnllI---T~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcg  220 (1205)
T KOG0606|consen  152 M--------VLAVEYLHSYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCG  220 (1205)
T ss_pred             h--------hHHhHhhccCCeecCCCCCCccee---eecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccC
Confidence            4        779999999999999999999999   57889999999987643211   0             0123589


Q ss_pred             CCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccC
Q 048594          181 TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD  260 (483)
Q Consensus       181 t~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  260 (483)
                      ||.|+|||++....|+..+|+|++|+|+|+.+.|+.||.++..++.+..+......++.. ...++++++++|.++|+.+
T Consensus       221 TPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~-dea~p~Ea~dli~~LL~qn  299 (1205)
T KOG0606|consen  221 TPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE-DEALPPEAQDLIEQLLRQN  299 (1205)
T ss_pred             CccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc-CcCCCHHHHHHHHHHHHhC
Confidence            999999999998899999999999999999999999999999999999999888888776 4568899999999999999


Q ss_pred             CCCCC---CHHHHHcCCcCCCCCC
Q 048594          261 PNNQI---TVAQILKHPWLNYENG  281 (483)
Q Consensus       261 P~~R~---t~~e~L~h~~~~~~~~  281 (483)
                      |..|.   ++-++.+|+||...++
T Consensus       300 p~~Rlgt~ga~evk~h~ff~~LDw  323 (1205)
T KOG0606|consen  300 PLCRLGTGGALEVKQHGFFQLLDW  323 (1205)
T ss_pred             hHhhcccchhhhhhhccceeeccc
Confidence            99996   5678899999985443

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.90  E-value=1.5e-23  Score=198.79  Aligned_cols=219  Identities=16%  Similarity=0.218  Sum_probs=175.8

Q ss_pred             ccceEEeeeecccCceeEEEEEECCC-----CCEEEEEEeccCCCC--------------------------------Cc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENST-----GLQFACKSISKTSKS--------------------------------DE   90 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~avK~~~~~~~~--------------------------------~~   90 (483)
                      ++|++....+-+|.||.||.|+.+.-     .+.+-+|.++.....                                +.
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~  362 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYAT  362 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCc
Confidence            46788889999999999999976532     234556666543211                                11


Q ss_pred             CeEEEeccCCCChHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEee
Q 048594           91 GYLKREHCDGGTLVDRISDR--------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD  162 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~--------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~D  162 (483)
                      .++++.+..-|+|..++..+        ..++-.+...++.|++.|++|||+.+++|.||-..|+++   ++.-.|||+|
T Consensus       363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqVkltD  439 (563)
T KOG1024|consen  363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQVKLTD  439 (563)
T ss_pred             ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeEEecc
Confidence            18888999999999999732        246667788899999999999999999999999999999   6778999999


Q ss_pred             cccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCC
Q 048594          163 FGLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFK  238 (483)
Q Consensus       163 fg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~  238 (483)
                      =.+++.+-++...   ........||+||.+....|+.++|+|||||++|||+| |+.|+..-+..++..-+.++.--. 
T Consensus       440 saLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRla-  518 (563)
T KOG1024|consen  440 SALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLA-  518 (563)
T ss_pred             chhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceec-
Confidence            9999876554321   11123456999999999899999999999999999998 999999999999888887764321 


Q ss_pred             CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          239 SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       239 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                        .+-+.|.++..++..||...|++||+.+|+..
T Consensus       519 --QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  519 --QPFNCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             --CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence              12378999999999999999999999999764

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.89  E-value=8e-23  Score=182.66  Aligned_cols=220  Identities=18%  Similarity=0.230  Sum_probs=176.1

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC-----------------------------eEEEec
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG-----------------------------YLKREH   97 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------------------~lv~E~   97 (483)
                      +...|.+++.||+|+||.+|+|.+-.+|..||||+-+........                             .+||++
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL   92 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL   92 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence            346799999999999999999999999999999998776644433                             899999


Q ss_pred             cCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce--
Q 048594           98 CDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV--  174 (483)
Q Consensus        98 ~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~--  174 (483)
                      + |.+|.+.+.-+ ..++..++.-++.|++.-++|+|.++++||||||+|+|++-.-....+.|+|||+|....+...  
T Consensus        93 L-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~  171 (341)
T KOG1163|consen   93 L-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQ  171 (341)
T ss_pred             c-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccc
Confidence            8 77999988644 5799999999999999999999999999999999999997655667899999999987643321  


Q ss_pred             ------ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC---hHHHHHHHHccccCCCCCC-CCC
Q 048594          175 ------YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES---LYGTLTAIMSREIDFKSDP-WPT  244 (483)
Q Consensus       175 ------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~-~~~  244 (483)
                            .....||..|.+-....+...+.+.|+=|+|.+|.++.-|.+||.+..   ..+-.+.|.......+... ...
T Consensus       172 HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G  251 (341)
T KOG1163|consen  172 HIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKG  251 (341)
T ss_pred             cCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCC
Confidence                  233578999999877776667888999999999999999999998753   3455666666655544332 245


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCH
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITV  267 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~  267 (483)
                      +|.++.-.+.-|-..--.+-|..
T Consensus       252 ~P~EF~myl~Y~R~L~F~E~Pdy  274 (341)
T KOG1163|consen  252 FPAEFAMYLNYCRGLGFEEKPDY  274 (341)
T ss_pred             CcHHHHHHHHHHhhcCCCCCCcH
Confidence            77888888877755555555554

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.88  E-value=1.2e-21  Score=193.75  Aligned_cols=222  Identities=23%  Similarity=0.288  Sum_probs=167.8

Q ss_pred             ceEEeeeecccCceeEEEEEECCCC-CEEEEEEeccCCCC-----------------------------------CcCeE
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTG-LQFACKSISKTSKS-----------------------------------DEGYL   93 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~-~~~avK~~~~~~~~-----------------------------------~~~~l   93 (483)
                      +|.+.+.||+|+||.||.|.+..++ ..+|+|+.......                                   ...|+
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            8999999999999999999998775 67899987764211                                   11299


Q ss_pred             EEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC--CCCcEEEeecccce--
Q 048594           94 KREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD--ENATLKATDFGLAF--  167 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~--~~~~ikl~Dfg~a~--  167 (483)
                      ||+.+ |.+|.++....  +.++..++..++.|++.+|++||+.|++||||||+|++++..+  ....+.|.|||+++  
T Consensus        99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~  177 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF  177 (322)
T ss_pred             EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence            99998 77999988544  5899999999999999999999999999999999999996543  12579999999998  


Q ss_pred             ecc-CCc-------e-ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC
Q 048594          168 FFE-EGK-------V-YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK  238 (483)
Q Consensus       168 ~~~-~~~-------~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  238 (483)
                      ... ...       . .....||..|+++....+...+.+.|+||++.++.+++.|..||.+.........+........
T Consensus       178 ~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~  257 (322)
T KOG1164|consen  178 KYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLL  257 (322)
T ss_pred             cccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhc
Confidence            321 111       1 1234599999999999998999999999999999999999999966553322222222211111


Q ss_pred             CC-CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          239 SD-PWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       239 ~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .. .....+.++..+...+-..+...+|.+..+..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~  292 (322)
T KOG1164|consen  258 TDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE  292 (322)
T ss_pred             cccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence            11 12334567777777777777788887776544

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.87  E-value=1.6e-21  Score=166.98  Aligned_cols=137  Identities=28%  Similarity=0.430  Sum_probs=123.8

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeech----------hhh
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLS----------LVQ  383 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~----------~~~  383 (483)
                      ..+++.+++++++++|..+|+|++|.|++.||..+|+.+|.++++.++.+|+..+|. +++.+....          ...
T Consensus        11 ~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~   89 (160)
T COG5126          11 FTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGD   89 (160)
T ss_pred             cccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCC
Confidence            456899999999999999999999999999999999999999999999999999999 666522222          233


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      ..+++..+|+.||+|+        +|+|+..+|..++..+|.. ++++++.+++.+|.|+||.|+|++|++++....
T Consensus        90 ~~Eel~~aF~~fD~d~--------dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~~  158 (160)
T COG5126          90 KEEELREAFKLFDKDH--------DGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDSP  158 (160)
T ss_pred             cHHHHHHHHHHhCCCC--------CceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhccC
Confidence            4789999999999999        9999999999999999999 999999999999999999999999999886553

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.87  E-value=1e-21  Score=183.18  Aligned_cols=219  Identities=17%  Similarity=0.240  Sum_probs=169.5

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC-----------------------------eEEEecc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG-----------------------------YLKREHC   98 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------------------~lv~E~~   98 (483)
                      .-.|++.++||+|+||+++.|.+--++++||||.-+.......+                             .||+|++
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL  106 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL  106 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence            34799999999999999999999999999999998776644333                             6899988


Q ss_pred             CCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC--CCCcEEEeecccceeccCCcee
Q 048594           99 DGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD--ENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        99 ~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~--~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                       |.+|.+++.-+ .+|+..++.-++.|++.-++|+|++.+|+|||||+|+||+..+  ....|.++|||+|....+..+.
T Consensus       107 -GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tk  185 (449)
T KOG1165|consen  107 -GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTK  185 (449)
T ss_pred             -CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcccc
Confidence             77999998766 5799999999999999999999999999999999999997532  3357999999999887654331


Q ss_pred             --------cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCC---ChHHHHHHHHccccCCCCC-CCC
Q 048594          176 --------EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE---SLYGTLTAIMSREIDFKSD-PWP  243 (483)
Q Consensus       176 --------~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~---~~~~~~~~i~~~~~~~~~~-~~~  243 (483)
                              ....||..||+-....+..-+.+.|.=|||-++++.|-|.+||.|.   +..+-.+.|-...-..+.. ...
T Consensus       186 qHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~  265 (449)
T KOG1165|consen  186 QHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCE  265 (449)
T ss_pred             ccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHHh
Confidence                    2357999999999999988899999999999999999999999774   3444455554332222111 113


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCH
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITV  267 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~  267 (483)
                      ++|.++...+.-.-..+-.+-|..
T Consensus       266 g~P~efa~Yl~yvR~L~F~E~PDY  289 (449)
T KOG1165|consen  266 GFPEEFATYLRYVRRLDFFETPDY  289 (449)
T ss_pred             cCHHHHHHHHHHHHhcCcccCCCH
Confidence            455555555554444444444544

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.87  E-value=1.2e-20  Score=184.81  Aligned_cols=221  Identities=36%  Similarity=0.565  Sum_probs=179.6

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc----------------------------------CeEEEe
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE----------------------------------GYLKRE   96 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------------------------------~~lv~E   96 (483)
                      |.+.+.||.|+||.||++.+.   ..+|+|.+........                                  .+++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            788999999999999999988   7889999876553321                                  189999


Q ss_pred             ccCCCChHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCC-cEEEeecccceeccCC
Q 048594           97 HCDGGTLVDRISDRE---RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA-TLKATDFGLAFFFEEG  172 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~---~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~-~ikl~Dfg~a~~~~~~  172 (483)
                      ++.++++.+++....   .+++..+..++.|++.++.|+|+.+++|||+||+||++   +... .++++|||.+......
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~---~~~~~~~~l~dfg~~~~~~~~  155 (384)
T COG0515          79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL---DRDGRVVKLIDFGLAKLLPDP  155 (384)
T ss_pred             cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee---cCCCCeEEEeccCcceecCCC
Confidence            999999998877665   79999999999999999999999999999999999999   4555 7999999999865433


Q ss_pred             c-------eecccccCCcccCccccCC---CCCCCcCchHHHHHHHHHHhhCCCCCCCCCh----HHHHHHHHccccC-C
Q 048594          173 K-------VYEEVVGTPLYMAPELLGP---CKYGKEIDIWSAGLILYNLLSGAQPFWAESL----YGTLTAIMSREID-F  237 (483)
Q Consensus       173 ~-------~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~~ll~g~~pf~~~~~----~~~~~~i~~~~~~-~  237 (483)
                      .       ......|+..|+|||.+.+   ..+....|+||+|++++++++|..||.....    ......+...... .
T Consensus       156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  235 (384)
T COG0515         156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL  235 (384)
T ss_pred             CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccc
Confidence            2       2356789999999999987   4678899999999999999999999877653    4445554444333 2


Q ss_pred             CCCCCCCC----CHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          238 KSDPWPTI----SSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       238 ~~~~~~~~----~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ........    ...+.+++..++..+|..|.+..+...++|..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~  279 (384)
T COG0515         236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA  279 (384)
T ss_pred             ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhh
Confidence            22111121    25789999999999999999999999887765

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.86  E-value=4.3e-23  Score=207.82  Aligned_cols=208  Identities=29%  Similarity=0.475  Sum_probs=178.7

Q ss_pred             eecccCceeEEEEEE---CCCCCEEEEEEeccCCCCCc---------------------------------CeEEEeccC
Q 048594           56 ELCRGESGRIYLCTE---NSTGLQFACKSISKTSKSDE---------------------------------GYLKREHCD   99 (483)
Q Consensus        56 ~lg~G~~g~V~~~~~---~~~~~~~avK~~~~~~~~~~---------------------------------~~lv~E~~~   99 (483)
                      ++|.|+||.|+++..   ...|..||+|+..+......                                 .|+++++..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            479999999998753   34578899999877542111                                 188999999


Q ss_pred             CCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccc
Q 048594          100 GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV  179 (483)
Q Consensus       100 g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~  179 (483)
                      ||.|...+.....+.+..++.+...++.+++++|+.+++|||+|++||++   +..|.+++.|||.++..-..+..   |
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~~---c  154 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKIA---C  154 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhhc---c
Confidence            99999999988889999999999999999999999999999999999999   78899999999999876554432   9


Q ss_pred             cCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCcc
Q 048594          180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR  259 (483)
Q Consensus       180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  259 (483)
                      ||..|||||++.  .....+|+||+|+++++|++|..||.+    +....|....+.++.    .++..+++++..++..
T Consensus       155 gt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~----~l~~~a~~~~~~l~~r  224 (612)
T KOG0603|consen  155 GTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR----ELSAEARSLFRQLFKR  224 (612)
T ss_pred             cchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch----hhhHHHHHHHHHHHhh
Confidence            999999999998  567889999999999999999999977    777888776666553    6788999999999999


Q ss_pred             CCCCCCCH-----HHHHcCCcCCCC
Q 048594          260 DPNNQITV-----AQILKHPWLNYE  279 (483)
Q Consensus       260 dP~~R~t~-----~e~L~h~~~~~~  279 (483)
                      +|..|...     .++++|+||...
T Consensus       225 ~p~nrLg~~~~~~~eik~h~f~~~i  249 (612)
T KOG0603|consen  225 NPENRLGAGPDGVDEIKQHEFFQSI  249 (612)
T ss_pred             CHHHHhccCcchhHHHhccchheee
Confidence            99999854     799999999843

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.86  E-value=3.7e-22  Score=189.57  Aligned_cols=201  Identities=25%  Similarity=0.376  Sum_probs=138.1

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC--------------------------------------
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------------------   91 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------------------------------------   91 (483)
                      .+...+.||.|+++.||.+.+..||+.+|+|++.........                                      
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            356688899999999999999999999999998665421111                                      


Q ss_pred             ----------------------eEEEeccCCCChHHHHhc---CCC----CCHHHHHHHHHHHHHHHHHHHHCCCeeeCC
Q 048594           92 ----------------------YLKREHCDGGTLVDRISD---RER----YTERAAASVFRSVVNALHACHSNGIMHRDL  142 (483)
Q Consensus        92 ----------------------~lv~E~~~g~~L~~~l~~---~~~----l~~~~~~~i~~qil~~l~~LH~~~ivH~dl  142 (483)
                                            +++|+-+.+ +|.+.+..   ...    +.......+..|++..+++||+.|++|+||
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi  171 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI  171 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred             EcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence                                  567777654 77776542   111    222334456689999999999999999999


Q ss_pred             CCCeEEEeeCCCCCcEEEeecccceeccCCceecccccCCcccCccccCC--------CCCCCcCchHHHHHHHHHHhhC
Q 048594          143 KPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP--------CKYGKEIDIWSAGLILYNLLSG  214 (483)
Q Consensus       143 kp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslGvil~~ll~g  214 (483)
                      +|+|+++   +.+|.+.|+||+.....+  ........+..|.|||....        ..++.+.|.|+||+++|.|++|
T Consensus       172 ~~~nfll---~~~G~v~Lg~F~~~~r~g--~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~  246 (288)
T PF14531_consen  172 KPENFLL---DQDGGVFLGDFSSLVRAG--TRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG  246 (288)
T ss_dssp             SGGGEEE----TTS-EEE--GGGEEETT--EEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred             ceeeEEE---cCCCCEEEcChHHHeecC--ceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence            9999999   788999999999876643  33332445677999997743        2468899999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCC
Q 048594          215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQ  264 (483)
Q Consensus       215 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  264 (483)
                      ..||...........      .|. .. .++|..++.+|..+|+++|.+|
T Consensus       247 ~lPf~~~~~~~~~~~------~f~-~C-~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  247 RLPFGLSSPEADPEW------DFS-RC-RDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             S-STCCCGGGSTSGG------GGT-TS-S---HHHHHHHHHHT-SSGGGS
T ss_pred             cCCCCCCCccccccc------cch-hc-CCcCHHHHHHHHHHccCCcccC
Confidence            999975432211111      111 12 3788999999999999999987

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.84  E-value=2.7e-20  Score=163.02  Aligned_cols=134  Identities=30%  Similarity=0.509  Sum_probs=120.8

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh--------------
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV--------------  382 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~--------------  382 (483)
                      ++..+...++++|+.+|+|++|+|+..||..+++.+|..+++.++..+++.+|.+++|.+....+.              
T Consensus         2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~   81 (151)
T KOG0027|consen    2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE   81 (151)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence            355677899999999999999999999999999999999999999999999999999983222211              


Q ss_pred             hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       383 ~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ...+.++++|+.||++|        +|+||.+||+++|..+|.+ +.++++.+++++|.|+||.|+|+||+.+|...
T Consensus        82 ~~~~el~eaF~~fD~d~--------~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~~  150 (151)
T KOG0027|consen   82 ASSEELKEAFRVFDKDG--------DGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSGK  150 (151)
T ss_pred             ccHHHHHHHHHHHccCC--------CCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhcC
Confidence            12348999999999999        9999999999999999999 99999999999999999999999999999754

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.83  E-value=2.5e-20  Score=184.56  Aligned_cols=149  Identities=23%  Similarity=0.275  Sum_probs=112.8

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECC-CCCEEEEEEeccCCC--------------------------------CCc
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENS-TGLQFACKSISKTSK--------------------------------SDE   90 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~--------------------------------~~~   90 (483)
                      ...+...|.+.+.||+|+||+||+|.++. +++.+|||.+.....                                ...
T Consensus        13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~   92 (365)
T PRK09188         13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGK   92 (365)
T ss_pred             cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCC
Confidence            34667889999999999999999999886 678889998653210                                001


Q ss_pred             CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCC-CCCeEEEeeCCCCCcEEEeecccceec
Q 048594           91 GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDL-KPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dl-kp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      .|+|||||+|++|.. +.   +..   ...++.|++.+|.|||++||+|||| ||+|||+   +.++.++|+|||++..+
T Consensus        93 ~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv---~~~~~ikLiDFGlA~~~  162 (365)
T PRK09188         93 DGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLM---GPDGEAAVIDFQLASVF  162 (365)
T ss_pred             cEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEE---cCCCCEEEEECccceec
Confidence            199999999998863 21   111   1467899999999999999999999 9999999   45678999999999876


Q ss_pred             cCCce---------ecccccCCcccCccccCCCC------CCCcCchH
Q 048594          170 EEGKV---------YEEVVGTPLYMAPELLGPCK------YGKEIDIW  202 (483)
Q Consensus       170 ~~~~~---------~~~~~gt~~y~aPE~~~~~~------~~~~~Diw  202 (483)
                      .....         .....+++.|+|||.+....      .+..+|-|
T Consensus       163 ~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        163 RRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             ccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence            53321         12356788899999986432      23456666

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.82  E-value=9.2e-21  Score=200.06  Aligned_cols=214  Identities=25%  Similarity=0.303  Sum_probs=157.1

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC---------------------------------eEEEe
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG---------------------------------YLKRE   96 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~---------------------------------~lv~E   96 (483)
                      +|...+.||++.|=.|.+|++.+ | .++||++-+....-..                                 |+|.+
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRq  101 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQ  101 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHH
Confidence            67889999999999999999874 4 4999999876532222                                 88999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec--cCCce
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF--EEGKV  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~--~~~~~  174 (483)
                      |... +|.|.|.-+.-+...+...|+-||+.||.-||..||+|||||.+|||++   .-+.+.|+||..-++.  ....+
T Consensus       102 yvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT---SWNW~~LtDFAsFKPtYLPeDNP  177 (1431)
T KOG1240|consen  102 YVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT---SWNWLYLTDFASFKPTYLPEDNP  177 (1431)
T ss_pred             HHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe---eechhhhhcccccCCccCCCCCc
Confidence            9876 8999998887788899999999999999999999999999999999994   5568999999865432  11111


Q ss_pred             --e----cccccCCcccCccccCCC----------C-CCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccC
Q 048594          175 --Y----EEVVGTPLYMAPELLGPC----------K-YGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREID  236 (483)
Q Consensus       175 --~----~~~~gt~~y~aPE~~~~~----------~-~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~  236 (483)
                        +    .+...--.|.|||.+...          + .+++-||||+||+++||++ |++||.-.    ++-+..++.-.
T Consensus       178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS----QL~aYr~~~~~  253 (1431)
T KOG1240|consen  178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS----QLLAYRSGNAD  253 (1431)
T ss_pred             ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH----HHHhHhccCcc
Confidence              1    111122359999987431          1 5678899999999999988 78888321    11111111000


Q ss_pred             CCCCCCC-CCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          237 FKSDPWP-TISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       237 ~~~~~~~-~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .+...+. --+..++.+|..|++.||++|.+|++.|+.
T Consensus       254 ~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  254 DPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             CHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            0000000 012468999999999999999999999985

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=9.4e-20  Score=195.89  Aligned_cols=167  Identities=25%  Similarity=0.345  Sum_probs=148.7

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC------------------------------eEEEec
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------------------YLKREH   97 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~------------------------------~lv~E~   97 (483)
                      .+.|.|.+.||.|+||.||+|.+.. |+.||+|+=......+-.                              +||+||
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey  775 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEY  775 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeec
Confidence            4689999999999999999999987 999999998776533221                              999999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee----CCCCCcEEEeecccceec---c
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT----DDENATLKATDFGLAFFF---E  170 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~----~~~~~~ikl~Dfg~a~~~---~  170 (483)
                      .+-|+|++++...+.+++..+..++.||+..|++||..+|||+||||+|+++..    +..+.-++|+|||.+.-+   .
T Consensus       776 ~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp  855 (974)
T KOG1166|consen  776 SPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFP  855 (974)
T ss_pred             cccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcC
Confidence            999999999998899999999999999999999999999999999999999963    234567999999998654   3


Q ss_pred             CCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCC
Q 048594          171 EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGA  215 (483)
Q Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~  215 (483)
                      ++......++|-.+-.+|...+.++++.+|.|.++.+++-||.|+
T Consensus       856 ~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~  900 (974)
T KOG1166|consen  856 DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK  900 (974)
T ss_pred             CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence            555667788999999999999999999999999999999999986

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.82  E-value=3.1e-21  Score=190.93  Aligned_cols=173  Identities=29%  Similarity=0.503  Sum_probs=135.7

Q ss_pred             eEEEeccCCCChHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           92 YLKREHCDGGTLVDRISDRE---RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~---~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      ||.|++|.-.+|.++|....   ..+......++.|+..++.|   ++.+|+|+||.||++.   .+..+||.|||+...
T Consensus       332 yI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~---~d~q~kIgDFgl~ts  405 (516)
T KOG1033|consen  332 YIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS---DDDQLKIGDFGLVTS  405 (516)
T ss_pred             hhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc---cchhhhhhhhhheee
Confidence            89999999999999997553   46778899999999999999   9999999999999994   455899999999887


Q ss_pred             ccCCc-------eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCC
Q 048594          169 FEEGK-------VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSD  240 (483)
Q Consensus       169 ~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~  240 (483)
                      .....       ......||++||+||.+.+..|+.++||||||+||++|++ =..+|.   ....+.-+..+.++  +.
T Consensus       406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e---r~~t~~d~r~g~ip--~~  480 (516)
T KOG1033|consen  406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE---RIATLTDIRDGIIP--PE  480 (516)
T ss_pred             cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH---HHHhhhhhhcCCCC--hH
Confidence            65444       3345689999999999999999999999999999999997 222321   12233333333332  12


Q ss_pred             CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       241 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      .+.+. ++-..|+.+||.+.|.+||++.+.-.|+|.
T Consensus       481 ~~~d~-p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  481 FLQDY-PEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             HhhcC-cHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence            22232 445699999999999999988888777775

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=2.5e-19  Score=170.79  Aligned_cols=172  Identities=23%  Similarity=0.409  Sum_probs=127.9

Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee-CCCCCcEEEeecccceecc
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT-DDENATLKATDFGLAFFFE  170 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~-~~~~~~ikl~Dfg~a~~~~  170 (483)
                      |+||.-... +|.+++..+ ..+-...+-++.|+++|+.|||++||.|||+|.+|||+.- ++.-..+.++|||++.--.
T Consensus       319 ylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~  396 (598)
T KOG4158|consen  319 YLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADD  396 (598)
T ss_pred             EEehhcchh-hHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeecc
Confidence            899987755 899999876 4566677789999999999999999999999999999975 3455789999999875432


Q ss_pred             CC-------ceecccccCCcccCccccCCCC-----C-CCcCchHHHHHHHHHHhhCCCCCCCCChHHH-HHHHHccccC
Q 048594          171 EG-------KVYEEVVGTPLYMAPELLGPCK-----Y-GKEIDIWSAGLILYNLLSGAQPFWAESLYGT-LTAIMSREID  236 (483)
Q Consensus       171 ~~-------~~~~~~~gt~~y~aPE~~~~~~-----~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~-~~~i~~~~~~  236 (483)
                      .-       ......-|...-||||+....+     . -.++|.|+.|.+.||++....||++...... ........+ 
T Consensus       397 ~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qL-  475 (598)
T KOG4158|consen  397 NHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQL-  475 (598)
T ss_pred             ccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhC-
Confidence            21       1122344677789999985422     1 2479999999999999999999987432211 111111111 


Q ss_pred             CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHH
Q 048594          237 FKSDPWPTISSSAKDLIRRMLIRDPNNQITVA  268 (483)
Q Consensus       237 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  268 (483)
                       + .-...+++.++++|..+|+.||++|+++.
T Consensus       476 -P-alp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  476 -P-ALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             -C-CCcccCChHHHHHHHHHhcCCccccCCcc
Confidence             1 11245789999999999999999999864

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.79  E-value=4.3e-19  Score=161.56  Aligned_cols=112  Identities=17%  Similarity=0.225  Sum_probs=94.3

Q ss_pred             eeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--C------------------------------c-----------
Q 048594           54 AEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--D------------------------------E-----------   90 (483)
Q Consensus        54 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~------------------------------~-----------   90 (483)
                      ...||+|++|.||+|.+. +|+.||||++......  .                              +           
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999999997 8999999999654210  0                              0           


Q ss_pred             -----------CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           91 -----------GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHAC-HSNGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        91 -----------~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~L-H~~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                                 .+||||||+|+++...+....++++..+..++.||+.+|.++ |+.||+||||||+||+++    .+.+
T Consensus        81 v~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~----~~~v  156 (190)
T cd05147          81 IPCPEPILLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH----DGKL  156 (190)
T ss_pred             CCCCcEEEecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE----CCcE
Confidence                       189999999987766655557899999999999999999999 799999999999999994    3579


Q ss_pred             EEeecccceecc
Q 048594          159 KATDFGLAFFFE  170 (483)
Q Consensus       159 kl~Dfg~a~~~~  170 (483)
                      +|+|||+|....
T Consensus       157 ~LiDFG~a~~~~  168 (190)
T cd05147         157 YIIDVSQSVEHD  168 (190)
T ss_pred             EEEEccccccCC
Confidence            999999997643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.78  E-value=1.2e-18  Score=159.06  Aligned_cols=113  Identities=17%  Similarity=0.240  Sum_probs=94.7

Q ss_pred             eeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------------------
Q 048594           54 AEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------------------   88 (483)
Q Consensus        54 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------------------   88 (483)
                      .+.||+|++|.||+|.+. +|+.||||++......                                             
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            568999999999999987 8999999998865210                                             


Q ss_pred             ---------CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           89 ---------DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        89 ---------~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                               ...|+||||++|+++........++++..+..++.|++.++.++|+ .||+||||||+||++.    .+.+
T Consensus        81 i~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~----~~~~  156 (190)
T cd05145          81 VPVPEPILLKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH----DGKP  156 (190)
T ss_pred             CCCceEEEecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE----CCCE
Confidence                     0017999999998665543345678899999999999999999999 9999999999999994    5689


Q ss_pred             EEeecccceeccC
Q 048594          159 KATDFGLAFFFEE  171 (483)
Q Consensus       159 kl~Dfg~a~~~~~  171 (483)
                      +|+|||++..+..
T Consensus       157 ~liDFG~a~~~~~  169 (190)
T cd05145         157 YIIDVSQAVELDH  169 (190)
T ss_pred             EEEEcccceecCC
Confidence            9999999987643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.77  E-value=7.6e-19  Score=162.18  Aligned_cols=142  Identities=17%  Similarity=0.176  Sum_probs=108.1

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------------   88 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------------   88 (483)
                      -+.++|.+.++||.|+||.||++..  ++..+|+|++......                                     
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~  105 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL  105 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence            4578999999999999999999655  4678999999643210                                     


Q ss_pred             ----------CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           89 ----------DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        89 ----------~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                                ...++||||++|.+|.++.    .+++    ....+|+.+|..||..|++|||++|.||++.   ..+ +
T Consensus       106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~---~~g-i  173 (232)
T PRK10359        106 LAERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS---KNG-L  173 (232)
T ss_pred             ecccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe---CCC-E
Confidence                      0127899999999998873    2333    2456999999999999999999999999994   445 9


Q ss_pred             EEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHh
Q 048594          159 KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLL  212 (483)
Q Consensus       159 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll  212 (483)
                      +|+|||............           .++....|+.++|+||||+++..+.
T Consensus       174 ~liDfg~~~~~~e~~a~d-----------~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        174 RIIDLSGKRCTAQRKAKD-----------RIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             EEEECCCcccccchhhHH-----------HHHHHhHhcccccccceeEeehHHH
Confidence            999999887653222111           1333445777899999999987764

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.77  E-value=5.5e-18  Score=140.23  Aligned_cols=142  Identities=24%  Similarity=0.330  Sum_probs=123.6

Q ss_pred             HHHhhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc---eee---chhhh
Q 048594          310 LKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT---TLN---LSLVQ  383 (483)
Q Consensus       310 l~~i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~---~~~---~~~~~  383 (483)
                      -..+...+.+.++++++++|..+|.|+||.|++++|+..|.++|..+++++++.|+++....-+-+   ...   ....+
T Consensus        19 sSnvFamf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea~gPINft~FLTmfGekL~gtd   98 (171)
T KOG0031|consen   19 SSNVFAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEAPGPINFTVFLTMFGEKLNGTD   98 (171)
T ss_pred             cchHHHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhCCCCeeHHHHHHHHHHHhcCCC
Confidence            334456688999999999999999999999999999999999999999999999999976544322   111   12224


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      +++.+..+|+.||.++        +|.|..+.|+.+|...|.+ ++++|++|++.+-.|..|.|+|.+|+.++..|.
T Consensus        99 pe~~I~~AF~~FD~~~--------~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~ithG~  167 (171)
T KOG0031|consen   99 PEEVILNAFKTFDDEG--------SGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIITHGE  167 (171)
T ss_pred             HHHHHHHHHHhcCccC--------CCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHHccc
Confidence            5788999999999999        9999999999999999999 999999999999999999999999999998664

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=99.74  E-value=1.9e-17  Score=138.20  Aligned_cols=135  Identities=27%  Similarity=0.418  Sum_probs=123.4

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh----------hhc
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL----------VQC  384 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~----------~~~  384 (483)
                      ..+..++.+.+++.|..||.+++|+|+..||+.+++++|..+..+++..|+..+|.++.|.+.+..+          .++
T Consensus        25 ~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt  104 (172)
T KOG0028|consen   25 SELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDT  104 (172)
T ss_pred             ccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCc
Confidence            3456778889999999999999999999999999999999999999999999999999998433322          236


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+++..+|+.+|-|+        +|.|+..+|+.+.+.||.. +++++.+|+.++|.++||.|+-+||..+|+.
T Consensus       105 ~eEi~~afrl~D~D~--------~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~  170 (172)
T KOG0028|consen  105 KEEIKKAFRLFDDDK--------TGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK  170 (172)
T ss_pred             HHHHHHHHHcccccC--------CCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence            889999999999999        9999999999999999999 9999999999999999999999999999864

>smart00090 RIO RIO-like kinase

Probab=99.70  E-value=6.1e-17  Score=152.48  Aligned_cols=119  Identities=14%  Similarity=0.209  Sum_probs=99.8

Q ss_pred             ccceEEeeeecccCceeEEEEE-ECCCCCEEEEEEeccCCCC--------------------------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCT-ENSTGLQFACKSISKTSKS--------------------------------------   88 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~~avK~~~~~~~~--------------------------------------   88 (483)
                      ...|.+.+.||.|++|.||+|. +..+|+.||+|++......                                      
T Consensus        27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~  106 (237)
T smart00090       27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR  106 (237)
T ss_pred             CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            3458899999999999999999 7789999999998754210                                      


Q ss_pred             --------------CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeeCCCCCeEEEeeCC
Q 048594           89 --------------DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG-IMHRDLKPENFIFTTDD  153 (483)
Q Consensus        89 --------------~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~-ivH~dlkp~NIll~~~~  153 (483)
                                    ...|+||||+.|.+|.........+....+..++.||+.+|.+||+.| ++|+||||+||++.   
T Consensus       107 L~~~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~---  183 (237)
T smart00090      107 LYEAGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH---  183 (237)
T ss_pred             HHhcCCCCCeeeEecCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE---
Confidence                          011899999999888776655556777788899999999999999999 99999999999994   


Q ss_pred             CCCcEEEeecccceecc
Q 048594          154 ENATLKATDFGLAFFFE  170 (483)
Q Consensus       154 ~~~~ikl~Dfg~a~~~~  170 (483)
                       .+.++|+|||.+....
T Consensus       184 -~~~i~LiDFg~a~~~~  199 (237)
T smart00090      184 -DGKVVIIDVSQSVELD  199 (237)
T ss_pred             -CCCEEEEEChhhhccC
Confidence             5689999999987543

>PTZ00184 calmodulin; Provisional

Probab=99.69  E-value=4.1e-16  Score=136.21  Aligned_cols=135  Identities=30%  Similarity=0.515  Sum_probs=119.7

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------h
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------Q  383 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~  383 (483)
                      +..+++++...+++.|..+|.+++|.|+.+||..++..++..++.+++..++..+|.+++|.+....+.          .
T Consensus         2 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~   81 (149)
T PTZ00184          2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD   81 (149)
T ss_pred             CCccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc
Confidence            455778888999999999999999999999999999999988899999999999999999973222111          2


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+.+..+|+.||.++        +|+|+.+|+..++..+|.. +.+++..++..+|.+++|.|+|+||+.+|.
T Consensus        82 ~~~~~~~~F~~~D~~~--------~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  147 (149)
T PTZ00184         82 SEEEIKEAFKVFDRDG--------NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM  147 (149)
T ss_pred             HHHHHHHHHHhhCCCC--------CCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence            3456889999999999        9999999999999999987 899999999999999999999999999875

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.68  E-value=1.5e-16  Score=143.95  Aligned_cols=160  Identities=21%  Similarity=0.287  Sum_probs=118.4

Q ss_pred             EEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeEEEeccCC
Q 048594           52 TIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYLKREHCDG  100 (483)
Q Consensus        52 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E~~~g  100 (483)
                      .+...|++|+||+|+.+..  .+.+++.+.+......                               ...|++|||+.|
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G   82 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAG   82 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecC
Confidence            4678899999999997765  5777876666544321                               111999999999


Q ss_pred             CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCC-CCCeEEEeeCCCCCcEEEeecccceeccCCcee----
Q 048594          101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDL-KPENFIFTTDDENATLKATDFGLAFFFEEGKVY----  175 (483)
Q Consensus       101 ~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dl-kp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~----  175 (483)
                      .+|...+..      . ...++.|++.+|.++|++||+|||| ||+|||+   +..+.++|+|||++....+....    
T Consensus        83 ~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv---~~~g~i~LIDFG~A~~~~~~~~~~r~L  152 (218)
T PRK12274         83 AAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLV---QEDGSPAVIDFQLAVRGNPRARWMRLL  152 (218)
T ss_pred             ccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEE---cCCCCEEEEECCCceecCCcchHHHHH
Confidence            988654321      1 2357889999999999999999999 7999999   55678999999999865433210    


Q ss_pred             ----------cccccCCcccCccccCCC-CCC-CcCchHHHHHHHHHHhhCCCCCCCCCh
Q 048594          176 ----------EEVVGTPLYMAPELLGPC-KYG-KEIDIWSAGLILYNLLSGAQPFWAESL  223 (483)
Q Consensus       176 ----------~~~~gt~~y~aPE~~~~~-~~~-~~~DiwslGvil~~ll~g~~pf~~~~~  223 (483)
                                .-...++.|++|+.-.-. ..+ ...++++.|.-+|.++|+..|+++..+
T Consensus       153 ~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~  212 (218)
T PRK12274        153 AREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE  212 (218)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence                      012357778888754322 223 567889999999999999999987653

>PTZ00183 centrin; Provisional

Probab=99.68  E-value=7.9e-16  Score=135.97  Aligned_cols=136  Identities=29%  Similarity=0.446  Sum_probs=121.2

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------hc
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------QC  384 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~~  384 (483)
                      ..+++++...++++|..+|.+++|.|+.+||..+++.+|..++..++..++..+|.+++|.+....+.          ..
T Consensus         9 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   88 (158)
T PTZ00183          9 PGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDP   88 (158)
T ss_pred             CCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCc
Confidence            34678888999999999999999999999999999999988899999999999999999973332221          22


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      .+.+..+|+.+|.++        +|+|+.+|+..++..+|.. +++++..+|..+|.|++|.|+|+||+.+|+..
T Consensus        89 ~~~l~~~F~~~D~~~--------~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  155 (158)
T PTZ00183         89 REEILKAFRLFDDDK--------TGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKKT  155 (158)
T ss_pred             HHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence            457889999999999        9999999999999999987 89999999999999999999999999999764

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.65  E-value=9.9e-16  Score=124.84  Aligned_cols=132  Identities=17%  Similarity=0.269  Sum_probs=112.6

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc--eeec------------hhh
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT--TLNL------------SLV  382 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~--~~~~------------~~~  382 (483)
                      ++.++..+++++|..||..+||+|+..++..+|+++|.+|++.++.+.....+.+.-+.  +.+.            ...
T Consensus         5 ~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q   84 (152)
T KOG0030|consen    5 FTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQ   84 (152)
T ss_pred             cCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcccc
Confidence            45677789999999999999999999999999999999999999999999988775332  2121            122


Q ss_pred             hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       383 ~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+.++..+.++.||++|        +|.|...||+++|.++|.+ ++++++.++.-.. |.+|.|+|+.|++.+-.
T Consensus        85 ~t~edfvegLrvFDkeg--------~G~i~~aeLRhvLttlGekl~eeEVe~Llag~e-D~nG~i~YE~fVk~i~~  151 (152)
T KOG0030|consen   85 GTYEDFVEGLRVFDKEG--------NGTIMGAELRHVLTTLGEKLTEEEVEELLAGQE-DSNGCINYEAFVKHIMS  151 (152)
T ss_pred             CcHHHHHHHHHhhcccC--------CcceeHHHHHHHHHHHHhhccHHHHHHHHcccc-ccCCcCcHHHHHHHHhc
Confidence            34677889999999999        9999999999999999999 9999999987543 67899999999997643

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.64  E-value=5.3e-16  Score=141.35  Aligned_cols=210  Identities=18%  Similarity=0.217  Sum_probs=159.4

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------CcCeEEEec
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------DEGYLKREH   97 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------~~~~lv~E~   97 (483)
                      ...++.+|.....|..|+|+..  |.-+++|++......                                ....++..|
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~  268 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQY  268 (448)
T ss_pred             hhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeee
Confidence            4456677888999999999988  456777877654311                                111789999


Q ss_pred             cCCCChHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCC--CeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           98 CDGGTLVDRISDRER--YTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~--l~~~~~~~i~~qil~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ++-|+|...+.+...  ....++.+++..|+.|+.|||+..  |.--.|....++++. +-...+..+|-.++..-    
T Consensus       269 mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmide-dltarismad~kfsfqe----  343 (448)
T KOG0195|consen  269 MPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDE-DLTARISMADTKFSFQE----  343 (448)
T ss_pred             ccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecc-hhhhheecccceeeeec----
Confidence            999999999987643  567789999999999999999975  445568888899843 23345556665555431    


Q ss_pred             eecccccCCcccCccccCCCCC---CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKY---GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~---~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                        ......|.|++||.+...+-   -.++|+||+++++|||.|...||......+.-..|.-..+...  ..|.+++.+.
T Consensus       344 --~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~--ippgis~hm~  419 (448)
T KOG0195|consen  344 --VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVH--IPPGISRHMN  419 (448)
T ss_pred             --cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcccccc--CCCCccHHHH
Confidence              22345789999999976543   2579999999999999999999988887777666654444322  2368999999


Q ss_pred             HHHHHhCccCCCCCCCHHHH
Q 048594          251 DLIRRMLIRDPNNQITVAQI  270 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~  270 (483)
                      .++.-|++.||.+||..+.+
T Consensus       420 klm~icmnedpgkrpkfdmi  439 (448)
T KOG0195|consen  420 KLMNICMNEDPGKRPKFDMI  439 (448)
T ss_pred             HHHHHHhcCCCCcCCCccee
Confidence            99999999999999988654

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.63  E-value=3.6e-17  Score=172.55  Aligned_cols=226  Identities=29%  Similarity=0.520  Sum_probs=178.8

Q ss_pred             ceEEeeeecccCceeEEEEEEC-CCCCEEEEEEeccCCCC---------------------------------CcCeEEE
Q 048594           50 HFTIAEELCRGESGRIYLCTEN-STGLQFACKSISKTSKS---------------------------------DEGYLKR   95 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~---------------------------------~~~~lv~   95 (483)
                      .|.+.+.||+|+++.|-.+... .+...+|+|.+......                                 +..++++
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~  100 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL  100 (601)
T ss_pred             cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence            4777888999999999888763 33455666666554310                                 0118999


Q ss_pred             eccCCCChHHHH-hcCC-CCCHHHHHHHHHHHHHHHHHHH-HCCCeeeCCCCCeEEEeeCCCCC-cEEEeecccceeccC
Q 048594           96 EHCDGGTLVDRI-SDRE-RYTERAAASVFRSVVNALHACH-SNGIMHRDLKPENFIFTTDDENA-TLKATDFGLAFFFEE  171 (483)
Q Consensus        96 E~~~g~~L~~~l-~~~~-~l~~~~~~~i~~qil~~l~~LH-~~~ivH~dlkp~NIll~~~~~~~-~ikl~Dfg~a~~~~~  171 (483)
                      +|..|+++.+.+ .... ..+...+..++.|+..++.|+| ..++.|+|++|+|.++   +.++ .+++.|||+|..+..
T Consensus       101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l---~~s~~~l~~~df~~At~~~~  177 (601)
T KOG0590|consen  101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLL---DESGSALKIADFGLATAYRN  177 (601)
T ss_pred             CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchh---ccCCCcccCCCchhhccccc
Confidence            999999999988 5444 6788889999999999999999 9999999999999999   5556 899999999987655


Q ss_pred             -Cc---eeccccc-CCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHH-HHHHHccccCCCCCCCCC
Q 048594          172 -GK---VYEEVVG-TPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGT-LTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       172 -~~---~~~~~~g-t~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~  244 (483)
                       .+   .....+| ++.|+|||...+..+ .+..|+||+|+++.-+++|..|+........ ..........+...+|..
T Consensus       178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (601)
T KOG0590|consen  178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNS  257 (601)
T ss_pred             cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCcccc
Confidence             22   2344678 999999999988544 7899999999999999999999965543321 122222223334566788


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      ++....+++.++|..+|..|.+.+++..+||+..
T Consensus       258 ~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  258 ISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             CChhhhhcccccccCCchhccccccccccccccc
Confidence            9999999999999999999999999999999985

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.60  E-value=4.5e-15  Score=136.39  Aligned_cols=112  Identities=17%  Similarity=0.217  Sum_probs=91.6

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------------------
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------------------   87 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------------------   87 (483)
                      -|.+.+.||+|++|.||++... +|+.+|||++.....                                          
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   94 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG   94 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence            3888999999999999999875 799999998654210                                          


Q ss_pred             --------CCcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEE
Q 048594           88 --------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLK  159 (483)
Q Consensus        88 --------~~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ik  159 (483)
                              ....++||||++|++|......      ..+..++.+|+.++.++|+.|++|+||+|+||++   +..+.++
T Consensus        95 i~v~~~~~~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill---~~~~~~~  165 (198)
T cd05144          95 FPVPKPIDWNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV---DDDEKIY  165 (198)
T ss_pred             CCCCceeecCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE---cCCCcEE
Confidence                    0112899999999988765421      3456788999999999999999999999999999   5577999


Q ss_pred             EeecccceeccC
Q 048594          160 ATDFGLAFFFEE  171 (483)
Q Consensus       160 l~Dfg~a~~~~~  171 (483)
                      |+|||.+.....
T Consensus       166 liDfg~~~~~~~  177 (198)
T cd05144         166 IIDWPQMVSTDH  177 (198)
T ss_pred             EEECCccccCCC
Confidence            999999876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.56  E-value=3.4e-15  Score=158.32  Aligned_cols=230  Identities=27%  Similarity=0.412  Sum_probs=190.8

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYL   93 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~l   93 (483)
                      -.+.+.+.+.+-+|+++.++.+....+|..+++|+......                                 ....+|
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L  881 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL  881 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence            34567778889999999999999888887777776544320                                 011199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc---
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE---  170 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~---  170 (483)
                      +++|..|++|...+...+..+.+.++..+..+..++++||+..+.|+|++|.|++.   ...+..++.+|+......   
T Consensus       882 ~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~---~~~gh~~l~~~~t~~~vg~~~  958 (1205)
T KOG0606|consen  882 VGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLI---AYDGHRPLTDFGTLSKVGLIP  958 (1205)
T ss_pred             hhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhh---cccCCcccCcccccccccccc
Confidence            99999999999999998889999999999999999999999999999999999999   677889999997332111   


Q ss_pred             ---CC--------------------------ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCC
Q 048594          171 ---EG--------------------------KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE  221 (483)
Q Consensus       171 ---~~--------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~  221 (483)
                         ..                          .......||+.|.+||.+.+....+.+|+|+.|+++++.++|.+||...
T Consensus       959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen  959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred             CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence               00                          0011246899999999999988899999999999999999999999999


Q ss_pred             ChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHH---HHHcCCcCCCCC
Q 048594          222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVA---QILKHPWLNYEN  280 (483)
Q Consensus       222 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~---e~L~h~~~~~~~  280 (483)
                      .....+.+|.+....++.-+ ...++++++++..+|..+|.+|.++.   ++-.|+||+...
T Consensus      1039 tpq~~f~ni~~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1039 TPQQIFENILNRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred             chhhhhhccccCCCCCCCCc-cccChhhhhhhhhhhccCchhccCcccccccccCCccCCCC
Confidence            99999999998887766543 35789999999999999999999887   999999998443

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.55  E-value=2.7e-14  Score=132.52  Aligned_cols=105  Identities=27%  Similarity=0.347  Sum_probs=87.3

Q ss_pred             eeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------------CcCeEEE
Q 048594           54 AEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------------DEGYLKR   95 (483)
Q Consensus        54 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------------~~~~lv~   95 (483)
                      ++.||+|++|.||+|.+  .|..+++|+.......                                      ...++||
T Consensus         1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~   78 (211)
T PRK14879          1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM   78 (211)
T ss_pred             CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence            35799999999999987  5788999986532211                                      1118999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      ||++|++|.+.+.....    ....++.+|+.+|.++|+.+++|+|++|.||++.    .+.++|+|||.+..
T Consensus        79 e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~  143 (211)
T PRK14879         79 EYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEF  143 (211)
T ss_pred             EEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccC
Confidence            99999999999865432    7888999999999999999999999999999994    56799999998865

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.55  E-value=3.3e-14  Score=143.80  Aligned_cols=181  Identities=27%  Similarity=0.353  Sum_probs=137.7

Q ss_pred             CcCeEEEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCC-eeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           89 DEGYLKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGI-MHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        89 ~~~~lv~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~i-vH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                      ...++|.+||.-|+|.+.+.. .-.+++.....+++.|+.||+|||+.-| +|+.+++.|+++   +.+-.+||+|||+.
T Consensus        20 ~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClv---d~~w~lklt~~Gl~   96 (484)
T KOG1023|consen   20 PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLV---DSRWVLKLTDFGLN   96 (484)
T ss_pred             CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccccee---eeeEEEEechhhhc
Confidence            445889999999999999987 4568888999999999999999998766 899999999999   67789999999998


Q ss_pred             eeccCC---ceecccccCCcccCccccCCC-------CCCCcCchHHHHHHHHHHhhCCCCCCCCCh----HHHHHHHHc
Q 048594          167 FFFEEG---KVYEEVVGTPLYMAPELLGPC-------KYGKEIDIWSAGLILYNLLSGAQPFWAESL----YGTLTAIMS  232 (483)
Q Consensus       167 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwslGvil~~ll~g~~pf~~~~~----~~~~~~i~~  232 (483)
                      ......   .......-...|.|||.+.+.       ..++++|+||+|++++|+++...||.....    .+....+.+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~  176 (484)
T KOG1023|consen   97 SLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK  176 (484)
T ss_pred             ccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh
Confidence            776421   111122234569999999763       146789999999999999999999976322    234444444


Q ss_pred             -cccCCCCCCC--CCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          233 -REIDFKSDPW--PTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       233 -~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                       +...+.+..+  ...++++..++..||..+|.+||+++++-.
T Consensus       177 ~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  177 GGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             cCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence             2211111111  145567899999999999999999998765

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.55  E-value=2.1e-14  Score=130.61  Aligned_cols=110  Identities=18%  Similarity=0.308  Sum_probs=86.0

Q ss_pred             eeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------------------
Q 048594           54 AEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------------------   88 (483)
Q Consensus        54 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------------------   88 (483)
                      .+.||+|++|.||+|.+. +|+.||||++......                                             
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~   80 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP   80 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence            467999999999999987 8999999998753210                                             


Q ss_pred             -------CcCeEEEeccCCCChHH-HHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEE
Q 048594           89 -------DEGYLKREHCDGGTLVD-RISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLK  159 (483)
Q Consensus        89 -------~~~~lv~E~~~g~~L~~-~l~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ik  159 (483)
                             ...++||||++|+.+.. .+... ... ..+..++.+++.++.++|. .+|+|+||+|+||++.    .+.++
T Consensus        81 ~~~~~~~~~~~lv~e~~~g~~~~~~~l~~~-~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~----~~~~~  154 (187)
T cd05119          81 VPKPIDLNRHVLVMEFIGGDGIPAPRLKDV-RLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD----DGKVY  154 (187)
T ss_pred             CCceEecCCCEEEEEEeCCCCccChhhhhh-hhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE----CCcEE
Confidence                   11278999999954332 11111 111 6788899999999999999 9999999999999994    67899


Q ss_pred             Eeecccceecc
Q 048594          160 ATDFGLAFFFE  170 (483)
Q Consensus       160 l~Dfg~a~~~~  170 (483)
                      |+|||.+....
T Consensus       155 liDfg~a~~~~  165 (187)
T cd05119         155 IIDVPQAVEID  165 (187)
T ss_pred             EEECccccccc
Confidence            99999997654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK10345 hypothetical protein; Provisional

Probab=99.54  E-value=2.9e-14  Score=131.19  Aligned_cols=109  Identities=17%  Similarity=0.194  Sum_probs=82.5

Q ss_pred             EEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------CcC--------------e---
Q 048594           52 TIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------DEG--------------Y---   92 (483)
Q Consensus        52 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------~~~--------------~---   92 (483)
                      .-.+.||+|++|.||.  |+.++.. +||++......                      ...              +   
T Consensus         5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            3457899999999995  7777665 79998754110                      000              2   


Q ss_pred             EEEec--cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHH-HHHHHCCCeeeCCCCCeEEEeeCC-CCCcEEEeecccc
Q 048594           93 LKREH--CDGGTLVDRISDRERYTERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDD-ENATLKATDFGLA  166 (483)
Q Consensus        93 lv~E~--~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l-~~LH~~~ivH~dlkp~NIll~~~~-~~~~ikl~Dfg~a  166 (483)
                      +|+||  +.+++|.+++.+. .+++.  ..++.+++.++ +|||+++|+||||||+|||+...+ ....++|+|++.+
T Consensus        82 ~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             EEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            78999  5579999999764 56666  35678888887 999999999999999999997533 3458999995444

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.52  E-value=4e-14  Score=130.08  Aligned_cols=101  Identities=28%  Similarity=0.393  Sum_probs=82.7

Q ss_pred             eecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------------------------CCcCeEEEec
Q 048594           56 ELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------------------------SDEGYLKREH   97 (483)
Q Consensus        56 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------------------------~~~~~lv~E~   97 (483)
                      .||+|++|.||+|..  +|..+++|.......                                      ....++||||
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   78 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY   78 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence            489999999999984  578899998543211                                      0111899999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ++|++|.+.+.....       .++.+++.+|.+||+.|++|+|++|.||++.    .+.++++|||.+...
T Consensus        79 ~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~~  139 (199)
T TIGR03724        79 IEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKYS  139 (199)
T ss_pred             ECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcCC
Confidence            999999998765321       7899999999999999999999999999994    578999999988653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.50  E-value=2.6e-14  Score=144.67  Aligned_cols=224  Identities=24%  Similarity=0.283  Sum_probs=177.1

Q ss_pred             ccccccceEEeeeecc--cCceeEEEEEE--CCCCCEEEEEEeccCCC--------------------------------
Q 048594           44 YEDIKLHFTIAEELCR--GESGRIYLCTE--NSTGLQFACKSISKTSK--------------------------------   87 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~--G~~g~V~~~~~--~~~~~~~avK~~~~~~~--------------------------------   87 (483)
                      .+.+.+.+.+...+|.  |.+|.||.+..  ..++..+|+|.-...-.                                
T Consensus       109 ~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e  188 (524)
T KOG0601|consen  109 DSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE  188 (524)
T ss_pred             cchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccc
Confidence            4567788889999999  99999999998  88999999998433211                                


Q ss_pred             -CCcCeEEEeccCCCChHHHHhcCCC-CCHHHHHHHHHHHHH----HHHHHHHCCCeeeCCCCCeEEEeeCCCC-CcEEE
Q 048594           88 -SDEGYLKREHCDGGTLVDRISDRER-YTERAAASVFRSVVN----ALHACHSNGIMHRDLKPENFIFTTDDEN-ATLKA  160 (483)
Q Consensus        88 -~~~~~lv~E~~~g~~L~~~l~~~~~-l~~~~~~~i~~qil~----~l~~LH~~~ivH~dlkp~NIll~~~~~~-~~ikl  160 (483)
                       ....|+-+|+|. .+|.++...... +++..++..+.+...    ||.++|+.+++|-|++|+||+..   .+ ..+++
T Consensus       189 ~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~---~~~~s~~~  264 (524)
T KOG0601|consen  189 GSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTT---SDWTSCKL  264 (524)
T ss_pred             cCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecc---cccceeec
Confidence             111199999996 588888776655 889999999999999    99999999999999999999995   44 78999


Q ss_pred             eecccceeccCCceec------ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCC--ChHHHHHHHHc
Q 048594          161 TDFGLAFFFEEGKVYE------EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE--SLYGTLTAIMS  232 (483)
Q Consensus       161 ~Dfg~a~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~--~~~~~~~~i~~  232 (483)
                      +|||+...+..+....      ...|...|++||...+ .++...|++++|.+..+..++..++...  ..+..+.... 
T Consensus       265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-  342 (524)
T KOG0601|consen  265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-  342 (524)
T ss_pred             CCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc-
Confidence            9999998887654221      1256778999999987 7889999999999999998888776543  2222222211 


Q ss_pred             cccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          233 REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                          .+.+.....+.++...+..|+..+|..|++++.++.|+++.
T Consensus       343 ----ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~  383 (524)
T KOG0601|consen  343 ----IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH  383 (524)
T ss_pred             ----CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc
Confidence                22223335567777799999999999999999999999987

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=99.45  E-value=7.5e-13  Score=117.92  Aligned_cols=134  Identities=28%  Similarity=0.444  Sum_probs=106.3

Q ss_pred             hccchHHHhhHHHHHhhcCCC-CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc-eeechhh----------
Q 048594          315 ENLPAEEIQKHKETFKQMDTN-DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT-TLNLSLV----------  382 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d-~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~-~~~~~~~----------  382 (483)
                      ..++..++..+...|.++|.+ ++|.|+++||..++. +..++   -.+++++.++.+++|. +....+.          
T Consensus        25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~-~~~Np---~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~  100 (187)
T KOG0034|consen   25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPE-LALNP---LADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKA  100 (187)
T ss_pred             cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHH-HhcCc---HHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCc
Confidence            447889999999999999999 999999999999993 33333   2458888888888876 3222222          


Q ss_pred             hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC-CCC-C--hHH----HHHHHHHHcCCCCCcccHHHHHHH
Q 048594          383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY-NMG-D--DAT----IKEIMFEVDRDKDGRISYEEFCAT  454 (483)
Q Consensus       383 ~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~-~~~-~--~~~----~~~~~~~~d~~~~g~i~~~ef~~~  454 (483)
                      ..+++++-+|++||.++        +|+|+.+||.+++..+ |.. +  ++.    ++.+|.++|.|+||.|+|+||+++
T Consensus       101 ~~~~Kl~faF~vYD~~~--------~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~  172 (187)
T KOG0034|consen  101 SKREKLRFAFRVYDLDG--------DGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKV  172 (187)
T ss_pred             cHHHHHHHHHHHhcCCC--------CCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence            22468899999999999        9999999999999986 333 3  444    445678999999999999999999


Q ss_pred             HHcCCC
Q 048594          455 MKTGTH  460 (483)
Q Consensus       455 ~~~~~~  460 (483)
                      +...+.
T Consensus       173 v~~~P~  178 (187)
T KOG0034|consen  173 VEKQPD  178 (187)
T ss_pred             HHcCcc
Confidence            977643

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.41  E-value=8e-13  Score=139.77  Aligned_cols=108  Identities=23%  Similarity=0.271  Sum_probs=84.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCC--------------------------------------CCC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS--------------------------------------KSD   89 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~--------------------------------------~~~   89 (483)
                      ...|...+.||+|+||+||++.....  .+++|......                                      ...
T Consensus       332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~  409 (535)
T PRK09605        332 KRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE  409 (535)
T ss_pred             ccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence            44567789999999999999987533  34444321110                                      011


Q ss_pred             cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           90 EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ..++||||++|++|.+++.        ....++.+|+.+|.+||+.+++||||||+||++.    .+.++|+|||+++..
T Consensus       410 ~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~----~~~~~liDFGla~~~  477 (535)
T PRK09605        410 EKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR----DDRLYLIDFGLGKYS  477 (535)
T ss_pred             CCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE----CCcEEEEeCcccccC
Confidence            2289999999999999875        4567899999999999999999999999999992    457999999998763

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.39  E-value=4.7e-12  Score=112.10  Aligned_cols=127  Identities=19%  Similarity=0.234  Sum_probs=112.2

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhc-CCCCCHHHHHHHHHhccCCCCCceeechhh---hchhHHHHHHhhcC
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL-GSTLTEVDVKQYMQAADIDGNGTTLNLSLV---QCKDTSLKDFNIFT  396 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~-~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~---~~~~~~~~~F~~~d  396 (483)
                      ....+...|...|+|+.|.|+.+||..+|... ...++.+-++-|+..+|.+.+|++...++.   .....++.+|+.||
T Consensus        55 ~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~Wr~vF~~~D  134 (221)
T KOG0037|consen   55 TFPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQWRNVFRTYD  134 (221)
T ss_pred             ccHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhcc
Confidence            34478889999999999999999999999965 567888999999999999999985554433   24577899999999


Q ss_pred             CCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          397 KPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       397 ~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      +|+        +|.|+..||+++|..+|.. +++-.+-+++.+|...+|.|.|++|+..+
T Consensus       135 ~D~--------SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~cc  186 (221)
T KOG0037|consen  135 RDR--------SGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCC  186 (221)
T ss_pred             cCC--------CCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHH
Confidence            999        9999999999999999999 88888999999998889999999998865

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.35  E-value=5.8e-12  Score=118.87  Aligned_cols=106  Identities=16%  Similarity=0.316  Sum_probs=81.3

Q ss_pred             eeeec-ccCceeEEEEEECCCCCEEEEEEeccCCC-----C-C-------------------------------------
Q 048594           54 AEELC-RGESGRIYLCTENSTGLQFACKSISKTSK-----S-D-------------------------------------   89 (483)
Q Consensus        54 ~~~lg-~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~-~-------------------------------------   89 (483)
                      ...|| .|+.|+||.+...  +..+++|.+.....     . .                                     
T Consensus        36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~  113 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV  113 (239)
T ss_pred             CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence            34577 8888889888765  77899988743110     0 0                                     


Q ss_pred             ------cCeEEEeccCC-CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEee
Q 048594           90 ------EGYLKREHCDG-GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD  162 (483)
Q Consensus        90 ------~~~lv~E~~~g-~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~D  162 (483)
                            ..++|+|+++| .+|.+++.. .++++..    +.+|+.+|.+||+.||+|+||||.|||+   +.++.++|+|
T Consensus       114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv---~~~~~v~LID  185 (239)
T PRK01723        114 RHGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILL---DPDGKFWLID  185 (239)
T ss_pred             ecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEE---cCCCCEEEEE
Confidence                  00499999998 688888765 3566543    5789999999999999999999999999   4456899999


Q ss_pred             cccceec
Q 048594          163 FGLAFFF  169 (483)
Q Consensus       163 fg~a~~~  169 (483)
                      ||.+...
T Consensus       186 fg~~~~~  192 (239)
T PRK01723        186 FDRGELR  192 (239)
T ss_pred             CCCcccC
Confidence            9988764

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=99.34  E-value=1e-11  Score=119.25  Aligned_cols=134  Identities=19%  Similarity=0.251  Sum_probs=119.2

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHhccCCCCCce----eechhhhchhHHHHHH
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGST-LTEVDVKQYMQAADIDGNGTT----LNLSLVQCKDTSLKDF  392 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~-~~~~~~~~l~~~~d~~~~g~~----~~~~~~~~~~~~~~~F  392 (483)
                      .++.-.+++.+|+.+|.+++|+++..++.+.+..++.+ +..+-+..++...|.|.+|..    +..+....+.++...|
T Consensus         9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E~~l~~~F   88 (463)
T KOG0036|consen    9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKELELYRIF   88 (463)
T ss_pred             cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhHHHHHHHH
Confidence            44455689999999999999999999999999999877 777778999999999999983    3334445678899999


Q ss_pred             hhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          393 NIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       393 ~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      +..|.+.        ||.|+.+|+.+.|+++|.. +++++..+++.+|.++++.|+++||-+.+.-..
T Consensus        89 ~~iD~~h--------dG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p  148 (463)
T KOG0036|consen   89 QSIDLEH--------DGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLYP  148 (463)
T ss_pred             hhhcccc--------CCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcCC
Confidence            9999999        9999999999999999999 999999999999999999999999999876655

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.24  E-value=9.5e-12  Score=129.15  Aligned_cols=123  Identities=23%  Similarity=0.334  Sum_probs=90.0

Q ss_pred             cccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------C----------
Q 048594           41 GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------D----------   89 (483)
Q Consensus        41 ~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------~----------   89 (483)
                      +.+.+++-..|+. +.||+|++|.||+|+.+.+|+.||||+.++....                     .          
T Consensus       112 G~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v  190 (537)
T PRK04750        112 GGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVV  190 (537)
T ss_pred             CCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHH
Confidence            3444555566777 8899999999999999988999999999764200                     0          


Q ss_pred             -c-------------------------------------------CeEEEeccCCCChHHH--HhcCC----CCCHHHHH
Q 048594           90 -E-------------------------------------------GYLKREHCDGGTLVDR--ISDRE----RYTERAAA  119 (483)
Q Consensus        90 -~-------------------------------------------~~lv~E~~~g~~L~~~--l~~~~----~l~~~~~~  119 (483)
                       +                                           .+||||||.|+.+.+.  +...+    .+.+..+.
T Consensus       191 ~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~  270 (537)
T PRK04750        191 AEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVE  270 (537)
T ss_pred             HHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHH
Confidence             0                                           0599999999999774  33333    24444555


Q ss_pred             HHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC-CCCcEEEeecccceeccC
Q 048594          120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD-ENATLKATDFGLAFFFEE  171 (483)
Q Consensus       120 ~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~-~~~~ikl~Dfg~a~~~~~  171 (483)
                      .++.||+       ..|++|+|++|.||++..++ ..+.++++|||++..+++
T Consensus       271 ~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        271 VFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             HHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            5555554       58999999999999995321 234899999999987643

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.23  E-value=8.9e-11  Score=104.68  Aligned_cols=138  Identities=21%  Similarity=0.310  Sum_probs=111.2

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCC-CCCHHHHHHHHHhccCCCCCceeechhhh---------c
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS-TLTEVDVKQYMQAADIDGNGTTLNLSLVQ---------C  384 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~-~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---------~  384 (483)
                      ..++..++..++.-|..-+  .+|.++.++|+.+++.+.. .-+..-++.+|..+|.|++|.+.+...+.         .
T Consensus        21 t~f~~~ei~~~Yr~Fk~~c--P~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~   98 (193)
T KOG0044|consen   21 TKFSKKEIQQWYRGFKNEC--PSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTL   98 (193)
T ss_pred             cCCCHHHHHHHHHHhcccC--CCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcH
Confidence            4567888888888888755  6889999999999999975 34455578899999999999955544332         3


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC----CC------C--ChHHHHHHHHHHcCCCCCcccHHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY----NM------G--DDATIKEIMFEVDRDKDGRISYEEFC  452 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~----~~------~--~~~~~~~~~~~~d~~~~g~i~~~ef~  452 (483)
                      +++++-+|++||.||        +|+|+.+|+-.+++.+    |.      .  .++-++.+|..+|.|+||.||++||+
T Consensus        99 eekl~w~F~lyD~dg--------dG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~  170 (193)
T KOG0044|consen   99 EEKLKWAFRLYDLDG--------DGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFI  170 (193)
T ss_pred             HHHhhhhheeecCCC--------CceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHH
Confidence            678888999999999        9999999998888765    32      1  34568889999999999999999999


Q ss_pred             HHHHcCCCCC
Q 048594          453 ATMKTGTHLR  462 (483)
Q Consensus       453 ~~~~~~~~~~  462 (483)
                      ..........
T Consensus       171 ~~~~~d~~i~  180 (193)
T KOG0044|consen  171 EGCKADPSIL  180 (193)
T ss_pred             HHhhhCHHHH
Confidence            9887765433

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.23  E-value=2.8e-11  Score=105.08  Aligned_cols=104  Identities=23%  Similarity=0.312  Sum_probs=84.6

Q ss_pred             EeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEEeccCCCC
Q 048594           53 IAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKREHCDGGT  102 (483)
Q Consensus        53 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~E~~~g~~  102 (483)
                      +++.||.|.++.||++....  ..+++|.+......                              ...|+++||+.|..
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~   79 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET   79 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence            46789999999999999864  78999998765310                              01289999999877


Q ss_pred             hHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594          103 LVDRISDRERYTERAAASVFRSVVNALHACHSN---GIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus       103 L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      +...       +......++.+++.++..+|..   +++|+|++|.||++.   ..+.++++|||.+..
T Consensus        80 ~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~---~~~~~~l~Df~~~~~  138 (155)
T cd05120          80 LDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD---DGKILGIIDWEYAGY  138 (155)
T ss_pred             cccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE---CCcEEEEEecccccC
Confidence            7544       5566777899999999999985   699999999999994   467899999998865

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.22  E-value=2.8e-11  Score=124.05  Aligned_cols=110  Identities=20%  Similarity=0.254  Sum_probs=84.5

Q ss_pred             eeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------------------
Q 048594           54 AEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------------------   88 (483)
Q Consensus        54 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------------------   88 (483)
                      .+.||+|++|.||+|+.+ +|+.||||+..+....                                             
T Consensus       122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf  200 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL  200 (437)
T ss_pred             CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence            367999999999999875 7999999998664200                                             


Q ss_pred             ------------------------------CcCeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHH-HHHHHHHCC
Q 048594           89 ------------------------------DEGYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVN-ALHACHSNG  136 (483)
Q Consensus        89 ------------------------------~~~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~-~l~~LH~~~  136 (483)
                                                    ...++||||++|++|.+..... ....   ...++..++. .+..+|..|
T Consensus       201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g  277 (437)
T TIGR01982       201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDG  277 (437)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCC
Confidence                                          0016999999999998876432 1222   2345555655 478899999


Q ss_pred             CeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594          137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus       137 ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      ++|+|++|.||++   ..++.++++|||++..++
T Consensus       278 ~~H~D~hPgNilv---~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       278 FFHADLHPGNIFV---LKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             ceeCCCCcccEEE---CCCCcEEEEeCCCeeECC
Confidence            9999999999999   566789999999987654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.22  E-value=8e-11  Score=106.58  Aligned_cols=113  Identities=12%  Similarity=0.138  Sum_probs=85.5

Q ss_pred             eeecccCceeEEEEEECC------CCCEEEEEEeccCCCC----------C---------c--C----------------
Q 048594           55 EELCRGESGRIYLCTENS------TGLQFACKSISKTSKS----------D---------E--G----------------   91 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~------~~~~~avK~~~~~~~~----------~---------~--~----------------   91 (483)
                      ..||.|--+.||.|....      .+..+|||+.......          +         .  .                
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999998653      3579999998653200          0         0  0                


Q ss_pred             -----------------eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeeeCCCCCeEEEeeCC
Q 048594           92 -----------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHAC-HSNGIMHRDLKPENFIFTTDD  153 (483)
Q Consensus        92 -----------------~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~L-H~~~ivH~dlkp~NIll~~~~  153 (483)
                                       +|||||+.+..+..-......+++..+..++.+++.+|..| |..|+||+||++.||++.   
T Consensus        83 l~~~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~---  159 (197)
T cd05146          83 MQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH---  159 (197)
T ss_pred             HHHcCCCCCeEEEecCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE---
Confidence                             99999998754432222223566677788899999999999 899999999999999994   


Q ss_pred             CCCcEEEeecccceeccC
Q 048594          154 ENATLKATDFGLAFFFEE  171 (483)
Q Consensus       154 ~~~~ikl~Dfg~a~~~~~  171 (483)
                       .+.+.|+|||.+.....
T Consensus       160 -~~~v~iIDF~qav~~~h  176 (197)
T cd05146         160 -DGKVWFIDVSQSVEPTH  176 (197)
T ss_pred             -CCcEEEEECCCceeCCC
Confidence             35799999999877643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.22  E-value=2.8e-11  Score=113.81  Aligned_cols=176  Identities=18%  Similarity=0.176  Sum_probs=131.9

Q ss_pred             eEEEeccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           92 YLKREHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                      .+++||+..|++..+|++    +..+......+|+.||+.||.|||+-.  |+|+++..+.|++   ..++.||+.--..
T Consensus       148 iFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifi---q~ngLIkig~~ap  224 (458)
T KOG1266|consen  148 IFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFI---QHNGLIKIGSVAP  224 (458)
T ss_pred             EEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheee---cCCceEEecccCc
Confidence            789999999999999975    356889999999999999999999875  9999999999999   5777777754322


Q ss_pred             ceeccC-----CceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCC-CCCCChHHHHHHHHccccCCCC
Q 048594          166 AFFFEE-----GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQP-FWAESLYGTLTAIMSREIDFKS  239 (483)
Q Consensus       166 a~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~p-f~~~~~~~~~~~i~~~~~~~~~  239 (483)
                      ......     ........+-++|.+||.-.-...+-++|||++|....+|..+... -.+........++.+.......
T Consensus       225 ~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~len  304 (458)
T KOG1266|consen  225 DSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLEN  304 (458)
T ss_pred             cccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeeccC
Confidence            111100     0001123567889999987766777899999999999999988765 3444444444455444333222


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                             ..-++++.+||+..|..||++.++|.||.+-
T Consensus       305 -------~lqr~~i~kcl~~eP~~rp~ar~llfHpllf  335 (458)
T KOG1266|consen  305 -------GLQRGSITKCLEGEPNGRPDARLLLFHPLLF  335 (458)
T ss_pred             -------ccccCcCcccccCCCCCCcchhhhhcCceee
Confidence                   2235789999999999999999999999764

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=99.19  E-value=4.1e-11  Score=93.79  Aligned_cols=68  Identities=21%  Similarity=0.305  Sum_probs=61.4

Q ss_pred             chhHHHHHHhhcCC-CCccchhccccccccHHHHHHHHhh-CCCC-Ch-HHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          384 CKDTSLKDFNIFTK-PSNILIRIMISIYITADELEAAFKE-YNMG-DD-ATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       384 ~~~~~~~~F~~~d~-~~~~~~~~~~~g~i~~~el~~~~~~-~~~~-~~-~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      ....+..+|+.||+ ++        +|+|+.+||+.++.. +|.. ++ ++++++|+.+|.|+||.|+|+||+.+|..-.
T Consensus         6 ai~~l~~~F~~fd~~~~--------~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~   77 (89)
T cd05022           6 AIETLVSNFHKASVKGG--------KESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA   77 (89)
T ss_pred             HHHHHHHHHHHHhCCCC--------CCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence            34678999999999 99        899999999999999 8865 66 8999999999999999999999999986554

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.13  E-value=3.4e-11  Score=122.26  Aligned_cols=224  Identities=20%  Similarity=0.239  Sum_probs=164.9

Q ss_pred             ccccccceEEeeeecccCceeEEEEEEC-CCCCEEEEEEeccCCCC---------------------------------C
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTEN-STGLQFACKSISKTSKS---------------------------------D   89 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~---------------------------------~   89 (483)
                      ......+|..+..||.|.|+.|+.+..+ .++..|++|.+......                                 +
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r  339 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR  339 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence            3445668889999999999999998866 67899999988664311                                 1


Q ss_pred             cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           90 EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ..|+-.|||+++++...+.-...+.+...+.+..|++.++.++|+..++|+|++|+||++.+++  +..++.|||.+..+
T Consensus       340 ~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~--~~~~~~~~~~~t~~  417 (524)
T KOG0601|consen  340 QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG--FFSKLGDFGCWTRL  417 (524)
T ss_pred             cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch--hhhhcccccccccc
Confidence            1188889999998877664445688888999999999999999999999999999999996433  78899999988653


Q ss_pred             cCCceecccccCCcc-cCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          170 EEGKVYEEVVGTPLY-MAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       170 ~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      .-... .....+..| .+|.......+..++|++|||+.+.+.+++.+.-...   .....|..+.....    +....+
T Consensus       418 ~~~~~-~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~---~~~~~i~~~~~p~~----~~~~~~  489 (524)
T KOG0601|consen  418 AFSSG-VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG---VQSLTIRSGDTPNL----PGLKLQ  489 (524)
T ss_pred             ceecc-cccccccccccchhhccccccccccccccccccccccccCcccCccc---ccceeeecccccCC----CchHHh
Confidence            21111 011123334 3555556666788999999999999999987654322   22223333322211    234477


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +..+.+.++.+++..|+.+.++..|+=|.
T Consensus       490 ~q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  490 LQVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             hhhhhhhhcCCccccchhhhhhcccchhh
Confidence            88889999999999999999998887554

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=99.11  E-value=2e-10  Score=85.45  Aligned_cols=61  Identities=38%  Similarity=0.568  Sum_probs=53.9

Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-Ch----HHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DD----ATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~----~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      +++.+|+.||+++        +|+|+.+||..+++.++.. ++    +.+..++..+|.|+||.|+|+||+.+|
T Consensus         1 ~l~~~F~~~D~d~--------~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    1 RLKEAFKKFDKDG--------DGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHHSTTS--------SSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             CHHHHHHHHcCCc--------cCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            4788999999999        9999999999999999864 33    456666999999999999999999986

...

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=99.06  E-value=4.9e-10  Score=87.90  Aligned_cols=67  Identities=16%  Similarity=0.307  Sum_probs=60.7

Q ss_pred             chhHHHHHHhhcC-CCCccchhccccc-cccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMISI-YITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~g-~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ....+.++|+.|| ++|        +| +|+.+||+.+|+.     +|.. ++++++++++.+|.|+||.|+|+||+.++
T Consensus         6 ~~~~l~~aF~~fD~~dg--------dG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li   77 (88)
T cd05027           6 AMVALIDVFHQYSGREG--------DKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFV   77 (88)
T ss_pred             HHHHHHHHHHHhcccCC--------CcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3467899999998 899        89 5999999999999     8877 88899999999999999999999999998


Q ss_pred             HcC
Q 048594          456 KTG  458 (483)
Q Consensus       456 ~~~  458 (483)
                      ...
T Consensus        78 ~~~   80 (88)
T cd05027          78 AMV   80 (88)
T ss_pred             HHH
Confidence            654

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=99.05  E-value=4.7e-09  Score=102.28  Aligned_cols=210  Identities=15%  Similarity=0.209  Sum_probs=148.4

Q ss_pred             EeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-----------------------------------CeEEEec
Q 048594           53 IAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-----------------------------------GYLKREH   97 (483)
Q Consensus        53 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-----------------------------------~~lv~E~   97 (483)
                      ..+.||+|+-+.+|-.-.-   .--+.|++........                                   .-+.|..
T Consensus        15 ~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~   91 (637)
T COG4248          15 PGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPK   91 (637)
T ss_pred             CCccccCCccceeeecchh---hchhheeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEeccc
Confidence            4677999999999975432   1235677765431100                                   1567777


Q ss_pred             cCCCChHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           98 CDGGTLVDRISD-------RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        98 ~~g~~L~~~l~~-------~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      +.|..--..+.+       .....+....++++.|+.+.+-||..|.+-+|++++|+|+   ++.+.|.|+|-..-....
T Consensus        92 v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lV---sd~~~V~LVdsDsfqi~~  168 (637)
T COG4248          92 VSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLV---SDDSKVVLVDSDSFQINA  168 (637)
T ss_pred             CCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceee---ecCceEEEEcccceeecc
Confidence            776543333322       2457888999999999999999999999999999999999   667789999877655545


Q ss_pred             CCceecccccCCcccCccccC-----CCCCCCcCchHHHHHHHHHHhhC-CCCCCCCC----hHHHHH-HHHccccCC--
Q 048594          171 EGKVYEEVVGTPLYMAPELLG-----PCKYGKEIDIWSAGLILYNLLSG-AQPFWAES----LYGTLT-AIMSREIDF--  237 (483)
Q Consensus       171 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~~ll~g-~~pf~~~~----~~~~~~-~i~~~~~~~--  237 (483)
                      .+......+|.+.|.+||...     +-.-+...|.|.|||++++||.| ++||.|-.    ....++ .|..+.+.+  
T Consensus       169 ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~  248 (637)
T COG4248         169 NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYAS  248 (637)
T ss_pred             CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeech
Confidence            666677788999999999765     22346789999999999999886 99997632    111222 333222111  


Q ss_pred             ----------CCCCCCCCCHHHHHHHHHhCccC--CCCCCCHH
Q 048594          238 ----------KSDPWPTISSSAKDLIRRMLIRD--PNNQITVA  268 (483)
Q Consensus       238 ----------~~~~~~~~~~~~~~li~~~L~~d--P~~R~t~~  268 (483)
                                ...+|.-+++.++.+..+|+...  +.-|||++
T Consensus       249 ~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~  291 (637)
T COG4248         249 DQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK  291 (637)
T ss_pred             hccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence                      12245568899999999998754  56899875

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.04  E-value=9e-10  Score=98.19  Aligned_cols=101  Identities=20%  Similarity=0.320  Sum_probs=78.8

Q ss_pred             eeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------CcCeEEEeccCCCChHH
Q 048594           54 AEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------DEGYLKREHCDGGTLVD  105 (483)
Q Consensus        54 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------~~~~lv~E~~~g~~L~~  105 (483)
                      ++.|+.|..+.||++...  +..|++|+.......                            ...++||||++|.++..
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~   80 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLT   80 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCcccc
Confidence            467899999999999865  788999998655310                            01189999999987764


Q ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----eeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594          106 RISDRERYTERAAASVFRSVVNALHACHSNGI-----MHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus       106 ~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~i-----vH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      .     .   .....++.+++.+|+.||+.++     +|+|++|.||++.    .+.++++||+.+..
T Consensus        81 ~-----~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~~  136 (170)
T cd05151          81 E-----D---FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAGM  136 (170)
T ss_pred             c-----c---ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEecccccC
Confidence            3     1   1123457889999999999985     9999999999994    34799999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PLN02964 phosphatidylserine decarboxylase

Probab=98.97  E-value=3.7e-09  Score=110.86  Aligned_cols=107  Identities=14%  Similarity=0.179  Sum_probs=85.9

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcC-CCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHh
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG-STLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFN  393 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~-~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~  393 (483)
                      ..+..+++.+++++|+.+|+|++|++    |..+++.+| ..+++++.                        ..+..+|+
T Consensus       135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~------------------------~fi~~mf~  186 (644)
T PLN02964        135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETER------------------------SFARRILA  186 (644)
T ss_pred             hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHH------------------------HHHHHHHH
Confidence            34677788999999999999999997    899999998 46666431                        12455677


Q ss_pred             hcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          394 IFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       394 ~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+|.|+        +|.|+.+||..++..++.. +++++.++|+.+|.|++|.|+++||..+|..
T Consensus       187 ~~D~Dg--------dG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~  243 (644)
T PLN02964        187 IVDYDE--------DGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLAL  243 (644)
T ss_pred             HhCCCC--------CCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            777888        7888888888888888765 7778888888888888888888888888866

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.93  E-value=4.7e-10  Score=115.62  Aligned_cols=151  Identities=17%  Similarity=0.291  Sum_probs=111.6

Q ss_pred             HHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecc----------cccCCcccCccccC
Q 048594          123 RSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE----------VVGTPLYMAPELLG  191 (483)
Q Consensus       123 ~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~----------~~gt~~y~aPE~~~  191 (483)
                      .+.+.|+.|+|. .++||++|.|++|.+   +.++..||+.|+++....++..+..          ......|.|||++.
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~---na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVV---NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheee---ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            345589999996 589999999999999   7889999999998766544221111          12345699999999


Q ss_pred             CCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCC-CCCCHHHHHHHHHhCccCCCCCCCHHH
Q 048594          192 PCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPW-PTISSSAKDLIRRMLIRDPNNQITVAQ  269 (483)
Q Consensus       192 ~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~t~~e  269 (483)
                      +...+.++|++|+||++|.+.. |+.-+.+.. ................... .++|+++++=+.++|..++..||++.+
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~-~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~  261 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANG-GLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDL  261 (700)
T ss_pred             cccccccccceeeeeEEEEEecCCcchhhccC-CcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhh
Confidence            8778999999999999999995 444443332 2222222222211111111 478999999999999999999999999


Q ss_pred             HHcCCcCC
Q 048594          270 ILKHPWLN  277 (483)
Q Consensus       270 ~L~h~~~~  277 (483)
                      ++..|||.
T Consensus       262 l~~~~ff~  269 (700)
T KOG2137|consen  262 LLSIPFFS  269 (700)
T ss_pred             hhcccccC
Confidence            99999997

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=98.92  E-value=3.3e-09  Score=84.40  Aligned_cols=65  Identities=22%  Similarity=0.428  Sum_probs=56.1

Q ss_pred             hhHHHHHHhhcC-CCCccchhccccc-cccHHHHHHHHhh-C----CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          385 KDTSLKDFNIFT-KPSNILIRIMISI-YITADELEAAFKE-Y----NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       385 ~~~~~~~F~~~d-~~~~~~~~~~~~g-~i~~~el~~~~~~-~----~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ...+..+|..|| +||        +| +|+.+||+.+++. +    +.. ++.++++++.++|.|+||.|+|+||+.+|.
T Consensus         9 ~~~~~~~F~~~dd~dg--------dg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~   80 (93)
T cd05026           9 MDTLIRIFHNYSGKEG--------DRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVA   80 (93)
T ss_pred             HHHHHHHHHHHHccCC--------CCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            456788999999 789        88 5999999999977 3    223 678999999999999999999999999985


Q ss_pred             c
Q 048594          457 T  457 (483)
Q Consensus       457 ~  457 (483)
                      .
T Consensus        81 ~   81 (93)
T cd05026          81 A   81 (93)
T ss_pred             H
Confidence            4

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=98.91  E-value=4.3e-09  Score=83.77  Aligned_cols=66  Identities=23%  Similarity=0.479  Sum_probs=58.1

Q ss_pred             chhHHHHHHhhcC-CCCccchhcccccc-ccHHHHHHHHhh-CC----CC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMISIY-ITADELEAAFKE-YN----MG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~g~-i~~~el~~~~~~-~~----~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ..+.++++|+.|| ++|        +|+ |+.+||+.+|+. +|    .. ++++++++|..+|.|++|.|+|+||+.++
T Consensus         7 ~~~~l~~~F~~fDd~dg--------~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~   78 (92)
T cd05025           7 AMETLINVFHAHSGKEG--------DKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLV   78 (92)
T ss_pred             HHHHHHHHHHHHhcccC--------CCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence            3577899999997 999        995 999999999986 54    23 78899999999999999999999999988


Q ss_pred             Hc
Q 048594          456 KT  457 (483)
Q Consensus       456 ~~  457 (483)
                      ..
T Consensus        79 ~~   80 (92)
T cd05025          79 AA   80 (92)
T ss_pred             HH
Confidence            64

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=98.90  E-value=5e-09  Score=82.18  Aligned_cols=66  Identities=18%  Similarity=0.374  Sum_probs=58.5

Q ss_pred             hhHHHHHHhhcCC-CCccchhccccccccHHHHHHHHhh---CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTK-PSNILIRIMISIYITADELEAAFKE---YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~-~~~~~~~~~~~g~i~~~el~~~~~~---~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ...+...|..||. +|+       +|+|+.+||+++++.   +|.+ ++++++++|+.+|.|++|.|+|+||+.+|..
T Consensus         9 ~~~~i~~F~~y~~~~~~-------~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~   79 (88)
T cd05029           9 IGLLVAIFHKYSGREGD-------KNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA   79 (88)
T ss_pred             HHHHHHHHHHHHccCCC-------CCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            4567889999998 664       699999999999973   6887 9999999999999999999999999998854

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.89  E-value=1.5e-08  Score=88.53  Aligned_cols=114  Identities=25%  Similarity=0.301  Sum_probs=88.7

Q ss_pred             EeeeecccCceeEEEEEECCCCCEEEEEE-eccCCCCCcC-------------------------------------eEE
Q 048594           53 IAEELCRGESGRIYLCTENSTGLQFACKS-ISKTSKSDEG-------------------------------------YLK   94 (483)
Q Consensus        53 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~-~~~~~~~~~~-------------------------------------~lv   94 (483)
                      .+..+-+|+-+.|+++...  |+..+||- +.+.......                                     .|+
T Consensus        11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~   88 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY   88 (229)
T ss_pred             cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence            5678889999999999876  88877775 3333222211                                     899


Q ss_pred             EeccCC-CChHHHHhcC-C-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           95 REHCDG-GTLVDRISDR-E-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        95 ~E~~~g-~~L~~~l~~~-~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      |||++| .++.+++... . .........++++|-+.+.-||.++|+|+||..+||++..++....+.++|||++..
T Consensus        89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            999988 4688888654 2 223333378999999999999999999999999999998777777789999999865

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=98.87  E-value=5.3e-09  Score=83.56  Aligned_cols=69  Identities=17%  Similarity=0.418  Sum_probs=59.9

Q ss_pred             chhHHHHHHhhcCC-CCccchhccccccccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          384 CKDTSLKDFNIFTK-PSNILIRIMISIYITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       384 ~~~~~~~~F~~~d~-~~~~~~~~~~~g~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ....++.+|..||. +|+       +|+|+.+||+.+|+.     +|.. ++++++.++..+|.|++|.|+|+||+.+|.
T Consensus         6 ~~~~l~~~F~~~D~~dg~-------dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~   78 (94)
T cd05031           6 AMESLILTFHRYAGKDGD-------KNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVA   78 (94)
T ss_pred             HHHHHHHHHHHHhccCCC-------CCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            35678999999997 862       499999999999986     4556 889999999999999999999999999987


Q ss_pred             cCC
Q 048594          457 TGT  459 (483)
Q Consensus       457 ~~~  459 (483)
                      ..+
T Consensus        79 ~~~   81 (94)
T cd05031          79 GLS   81 (94)
T ss_pred             HHH
Confidence            654

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.84  E-value=2.2e-08  Score=88.01  Aligned_cols=101  Identities=29%  Similarity=0.419  Sum_probs=77.7

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEE-eccCCCCCcC-------------------------------------eEEEe
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKS-ISKTSKSDEG-------------------------------------YLKRE   96 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~-~~~~~~~~~~-------------------------------------~lv~E   96 (483)
                      ..+++|+-+.++.+...  |.++++|. +++.-.....                                     .|+||
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me   79 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME   79 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence            35789999999998664  55566665 3332222211                                     69999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      |++|..|.+.+...       ...++..+-.-+.-||..||+|+||.++||++.    ...+.++|||++..
T Consensus        80 ~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg~~  140 (204)
T COG3642          80 YIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLGEF  140 (204)
T ss_pred             EeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCcccc
Confidence            99999899888765       255777888888999999999999999999994    33499999999875

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=98.84  E-value=3.4e-08  Score=95.66  Aligned_cols=128  Identities=23%  Similarity=0.325  Sum_probs=96.8

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhc-CCCCCHHHHHHHHHhccCCCCCcee---------------------e
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL-GSTLTEVDVKQYMQAADIDGNGTTL---------------------N  378 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~-~~~~~~~~~~~l~~~~d~~~~g~~~---------------------~  378 (483)
                      ...++++.|+++|.+++|+|+...+..++... |.+++=.-+..-....+  .+|...                     .
T Consensus       462 ~~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~~s--~d~~v~Y~~~~~~l~~e~~~~ea~~slv  539 (631)
T KOG0377|consen  462 HRSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKLANGS--DDGKVEYKSTLDNLDTEVILEEAGSSLV  539 (631)
T ss_pred             hhhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccCCC--cCcceehHhHHHHhhhhhHHHHHHhHHH
Confidence            34579999999999999999999999999986 77766433333233322  233310                     0


Q ss_pred             chhhhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCC----CC-ChHHHHHHHHHHcCCCCCcccHHHHHH
Q 048594          379 LSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN----MG-DDATIKEIMFEVDRDKDGRISYEEFCA  453 (483)
Q Consensus       379 ~~~~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~----~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~  453 (483)
                      ....-....+..+|+..|.|+        +|.|+.+|++.+.+.++    .. ++.++.++-+.+|.|+||.|++.||++
T Consensus       540 etLYr~ks~LetiF~~iD~D~--------SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLe  611 (631)
T KOG0377|consen  540 ETLYRNKSSLETIFNIIDADN--------SGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLE  611 (631)
T ss_pred             HHHHhchhhHHHHHHHhccCC--------CCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHH
Confidence            111112455778999999999        99999999999988764    33 788999999999999999999999999


Q ss_pred             HHHcC
Q 048594          454 TMKTG  458 (483)
Q Consensus       454 ~~~~~  458 (483)
                      .++-.
T Consensus       612 AFrlv  616 (631)
T KOG0377|consen  612 AFRLV  616 (631)
T ss_pred             HHhhh
Confidence            88643

>smart00027 EH Eps15 homology domain

Probab=98.82  E-value=1.4e-08  Score=81.55  Aligned_cols=65  Identities=18%  Similarity=0.221  Sum_probs=59.2

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ...+..+|+.||+++        +|+|+.+||+.+|+.+|. ++++++.++..+|.+++|.|+|+||+.+|+.-
T Consensus         9 ~~~l~~~F~~~D~d~--------~G~Is~~el~~~l~~~~~-~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~   73 (96)
T smart00027        9 KAKYEQIFRSLDKNQ--------DGTVTGAQAKPILLKSGL-PQTLLAKIWNLADIDNDGELDKDEFALAMHLI   73 (96)
T ss_pred             HHHHHHHHHHhCCCC--------CCeEeHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            457889999999999        999999999999999876 68899999999999999999999999987543

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=98.81  E-value=1.5e-08  Score=75.41  Aligned_cols=60  Identities=23%  Similarity=0.318  Sum_probs=55.6

Q ss_pred             HHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          389 LKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       389 ~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +++|+.+|+++        +|+|+.+|+..+|+.+|. +++++..++..+|.+++|.|+|+||+.++..
T Consensus         2 ~~~F~~~D~~~--------~G~i~~~el~~~l~~~g~-~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~   61 (67)
T cd00052           2 DQIFRSLDPDG--------DGLISGDEARPFLGKSGL-PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL   61 (67)
T ss_pred             hHHHHHhCCCC--------CCcCcHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            56899999999        999999999999999987 7889999999999999999999999998753

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=98.81  E-value=1.1e-08  Score=89.59  Aligned_cols=81  Identities=25%  Similarity=0.397  Sum_probs=69.3

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCCCCc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRG  463 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~  463 (483)
                      ..++..+|+.||+++        +|+|+..||..+++.+|.. +++++..++.++|.|++|.|+++||+.+|........
T Consensus         7 ~~el~~~F~~fD~d~--------~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~   78 (151)
T KOG0027|consen    7 ILELKEAFQLFDKDG--------DGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKT   78 (151)
T ss_pred             HHHHHHHHHHHCCCC--------CCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccc
Confidence            467899999999999        9999999999999999998 9999999999999999999999999999987654322


Q ss_pred             c---ccccccchh
Q 048594          464 T---SYRNLSHIF  473 (483)
Q Consensus       464 ~---~~~~~~~~~  473 (483)
                      .   +.+.++.+|
T Consensus        79 ~~~~~~~el~eaF   91 (151)
T KOG0027|consen   79 DEEASSEELKEAF   91 (151)
T ss_pred             cccccHHHHHHHH
Confidence            2   234555544

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=98.76  E-value=2.5e-08  Score=74.03  Aligned_cols=66  Identities=23%  Similarity=0.398  Sum_probs=55.5

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccch
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILI  403 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~~  403 (483)
                      +++++|+.+|+|++|+|+.+||..++..++...+..+++                       +.+..+|+.+|+++    
T Consensus         1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~D~d~----   53 (66)
T PF13499_consen    1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESD-----------------------EMIDQIFREFDTDG----   53 (66)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHH-----------------------HHHHHHHHHHTTTS----
T ss_pred             CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHH-----------------------HHHHHHHHHhCCCC----
Confidence            478999999999999999999999999998777643333                       35566899999999    


Q ss_pred             hccccccccHHHHHHHH
Q 048594          404 RIMISIYITADELEAAF  420 (483)
Q Consensus       404 ~~~~~g~i~~~el~~~~  420 (483)
                          +|.|+.+|+..++
T Consensus        54 ----dG~i~~~Ef~~~~   66 (66)
T PF13499_consen   54 ----DGRISFDEFLNFM   66 (66)
T ss_dssp             ----SSSEEHHHHHHHH
T ss_pred             ----cCCCcHHHHhccC
Confidence                8999999998764

...

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=98.74  E-value=3.1e-08  Score=77.85  Aligned_cols=66  Identities=17%  Similarity=0.335  Sum_probs=56.8

Q ss_pred             chhHHHHHHhh-cCCCCccchhccccc-cccHHHHHHHHhhC-----CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          384 CKDTSLKDFNI-FTKPSNILIRIMISI-YITADELEAAFKEY-----NMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       384 ~~~~~~~~F~~-~d~~~~~~~~~~~~g-~i~~~el~~~~~~~-----~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ....+..+|+. +|++|        +| +|+.+||+.++...     +.. ++.++++++.++|.|+||.|+|+||+.+|
T Consensus         7 ~i~~l~~~F~~y~~~dg--------~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~   78 (89)
T cd05023           7 CIESLIAVFQKYAGKDG--------DSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLI   78 (89)
T ss_pred             HHHHHHHHHHHHhccCC--------CcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence            34678899999 77888        65 99999999999886     223 67899999999999999999999999988


Q ss_pred             Hc
Q 048594          456 KT  457 (483)
Q Consensus       456 ~~  457 (483)
                      ..
T Consensus        79 ~~   80 (89)
T cd05023          79 GG   80 (89)
T ss_pred             HH
Confidence            54

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.73  E-value=6.4e-08  Score=91.07  Aligned_cols=134  Identities=19%  Similarity=0.250  Sum_probs=105.1

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh--------------h
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV--------------Q  383 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~--------------~  383 (483)
                      ..+....+..+|.++|.+++|+++..||+..+..........++.+-+..+|.|.+|.+.....+              .
T Consensus        72 ~ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d  151 (325)
T KOG4223|consen   72 PEESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPD  151 (325)
T ss_pred             cchhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCcccccc
Confidence            34455688999999999999999999999998887666667778888999999999972221111              0


Q ss_pred             c---------hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC--ChHHHHHHHHHHcCCCCCcccHHHHH
Q 048594          384 C---------KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG--DDATIKEIMFEVDRDKDGRISYEEFC  452 (483)
Q Consensus       384 ~---------~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~--~~~~~~~~~~~~d~~~~g~i~~~ef~  452 (483)
                      .         ...-+.-|+.-|.||        +|.+|.+||-.+|.--..+  .+-.+.+-|..+|.|+||.|+++||+
T Consensus       152 ~e~~~~~~km~~rDe~rFk~AD~d~--------dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfi  223 (325)
T KOG4223|consen  152 EEDNEEYKKMIARDEERFKAADQDG--------DGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFI  223 (325)
T ss_pred             chhcHHHHHHHHHHHHHHhhcccCC--------CCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHH
Confidence            0         111355799999999        9999999999998765433  45567788999999999999999999


Q ss_pred             HHHHcCC
Q 048594          453 ATMKTGT  459 (483)
Q Consensus       453 ~~~~~~~  459 (483)
                      .-|....
T Consensus       224 gd~~~~~  230 (325)
T KOG4223|consen  224 GDLYSHE  230 (325)
T ss_pred             hHHhhcc
Confidence            9776554

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=98.72  E-value=3.2e-08  Score=78.07  Aligned_cols=66  Identities=20%  Similarity=0.354  Sum_probs=58.3

Q ss_pred             hhHHHHHHhhcCC--CCccchhccccccccHHHHHHHHhh-CCCC-----ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          385 KDTSLKDFNIFTK--PSNILIRIMISIYITADELEAAFKE-YNMG-----DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       385 ~~~~~~~F~~~d~--~~~~~~~~~~~g~i~~~el~~~~~~-~~~~-----~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      .+.+..+|..||+  ++        +|+|+.+||..+++. +|..     ++++++.++..+|.+++|.|+|+||+.++.
T Consensus         7 ~~~l~~~F~~~D~~~~~--------~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~   78 (88)
T cd00213           7 IETIIDVFHKYSGKEGD--------KDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIG   78 (88)
T ss_pred             HHHHHHHHHHHhhccCC--------CCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHH
Confidence            4568899999999  79        999999999999986 5532     488999999999999999999999999986


Q ss_pred             cC
Q 048594          457 TG  458 (483)
Q Consensus       457 ~~  458 (483)
                      ..
T Consensus        79 ~~   80 (88)
T cd00213          79 KL   80 (88)
T ss_pred             HH
Confidence            54

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=98.70  E-value=4e-08  Score=69.70  Aligned_cols=49  Identities=29%  Similarity=0.510  Sum_probs=45.7

Q ss_pred             cccccHHHHHHHHhhCCCC--ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          408 SIYITADELEAAFKEYNMG--DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       408 ~g~i~~~el~~~~~~~~~~--~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      +|+|+.++|+.++..+|..  +++++..++..+|.|++|.|+|+||+.+|.
T Consensus         2 ~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~   52 (54)
T PF13833_consen    2 DGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ   52 (54)
T ss_dssp             SSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred             cCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence            6999999999999888765  788999999999999999999999999985

...

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=98.65  E-value=6e-08  Score=83.68  Aligned_cols=79  Identities=22%  Similarity=0.404  Sum_probs=67.8

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCCCCc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRG  463 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~  463 (483)
                      ..+++++|..||+++        +|.|+..||..+++.+|.. +++++.+|+..+|. +.|.|+|.+|+.+|..... +.
T Consensus        19 i~~lkeaF~l~D~d~--------~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~-~~   88 (160)
T COG5126          19 IQELKEAFQLFDRDS--------DGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLK-RG   88 (160)
T ss_pred             HHHHHHHHHHhCcCC--------CCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhc-cC
Confidence            357889999999999        9999999999999999988 89999999999999 8999999999999976654 45


Q ss_pred             cccccccchh
Q 048594          464 TSYRNLSHIF  473 (483)
Q Consensus       464 ~~~~~~~~~~  473 (483)
                      .+.+.|...|
T Consensus        89 ~~~Eel~~aF   98 (160)
T COG5126          89 DKEEELREAF   98 (160)
T ss_pred             CcHHHHHHHH
Confidence            5566666555

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.65  E-value=7.2e-08  Score=87.02  Aligned_cols=73  Identities=21%  Similarity=0.319  Sum_probs=49.6

Q ss_pred             eEEEeccC--CCChHHHHhcCCCCCHHHHHHHHHHHHHHHHH-HHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           92 YLKREHCD--GGTLVDRISDRERYTERAAASVFRSVVNALHA-CHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        92 ~lv~E~~~--g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~-LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      +|||||+.  |..+.. +... .++......++.+++..+.. +|+.||+|+||.+.||++.   .. .+.++|||.+..
T Consensus        82 ~ivME~I~~~G~~~~~-l~~~-~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~---~~-~~~iIDf~qav~  155 (188)
T PF01163_consen   82 VIVMEYIGEDGVPLPR-LKDV-DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD---DG-KVYIIDFGQAVD  155 (188)
T ss_dssp             EEEEE--EETTEEGGC-HHHC-GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE---TT-CEEE--GTTEEE
T ss_pred             EEEEEecCCCccchhh-HHhc-cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee---cc-eEEEEecCccee
Confidence            89999998  644444 3332 12244567788888885554 6799999999999999994   33 899999999877


Q ss_pred             cc
Q 048594          169 FE  170 (483)
Q Consensus       169 ~~  170 (483)
                      ..
T Consensus       156 ~~  157 (188)
T PF01163_consen  156 SS  157 (188)
T ss_dssp             TT
T ss_pred             cC
Confidence            54

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.59  E-value=1.9e-07  Score=87.93  Aligned_cols=125  Identities=24%  Similarity=0.340  Sum_probs=97.4

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHhccCCCCCceeechhhhc--------------hh
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGST-LTEVDVKQYMQAADIDGNGTTLNLSLVQC--------------KD  386 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~-~~~~~~~~l~~~~d~~~~g~~~~~~~~~~--------------~~  386 (483)
                      +..-++.|+.-|.|++|.+|++||..+|.=-..+ +..--|.+-+..+|.|+||.+....++..              ..
T Consensus       162 ~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~  241 (325)
T KOG4223|consen  162 IARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLT  241 (325)
T ss_pred             HHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccc
Confidence            3456789999999999999999999887743222 22233667788999999998444333321              12


Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHH
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCAT  454 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~  454 (483)
                      +-.+.|...|+|+        +|+|+.+||++.+.--+.. ..+++.-++.+.|.|+||++|++|-+.-
T Consensus       242 Ere~F~~~~Dknk--------DG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~~  302 (325)
T KOG4223|consen  242 EREQFFEFRDKNK--------DGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILEH  302 (325)
T ss_pred             cHHHHHHHhhcCC--------CCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhhC
Confidence            2346778899999        9999999999988877776 7889999999999999999999998763

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=98.56  E-value=1.1e-07  Score=80.26  Aligned_cols=81  Identities=20%  Similarity=0.381  Sum_probs=68.5

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCCCCc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRG  463 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~  463 (483)
                      ..+++.+|..||.++        +|+|+.+||+.+++.+|+. ..+++..++.++|.++.|.|+|++|..+|...... +
T Consensus        32 ~q~i~e~f~lfd~~~--------~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e-~  102 (172)
T KOG0028|consen   32 KQEIKEAFELFDPDM--------AGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGE-R  102 (172)
T ss_pred             HhhHHHHHHhhccCC--------CCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhc-c
Confidence            467888999999999        8999999999999999988 88899999999999999999999999998777664 3


Q ss_pred             cccccccchhc
Q 048594          464 TSYRNLSHIFI  474 (483)
Q Consensus       464 ~~~~~~~~~~~  474 (483)
                      .+.+.++..|-
T Consensus       103 dt~eEi~~afr  113 (172)
T KOG0028|consen  103 DTKEEIKKAFR  113 (172)
T ss_pred             CcHHHHHHHHH
Confidence            37777776664

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=98.56  E-value=2.2e-07  Score=67.26  Aligned_cols=60  Identities=42%  Similarity=0.654  Sum_probs=56.3

Q ss_pred             HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          388 SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       388 ~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      +..+|+.+|.++        +|.|+.+|+..+++.++.. +.+.+..++..+|.+++|.|+|+||+.++
T Consensus         2 ~~~~f~~~d~~~--------~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~   62 (63)
T cd00051           2 LREAFRLFDKDG--------DGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM   62 (63)
T ss_pred             HHHHHHHhCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            567899999999        9999999999999999988 88999999999999999999999999876

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.55  E-value=4.6e-07  Score=83.66  Aligned_cols=94  Identities=23%  Similarity=0.317  Sum_probs=74.4

Q ss_pred             CEEEEEEeccCCCCCcCeEEEeccCCC-ChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC
Q 048594           75 LQFACKSISKTSKSDEGYLKREHCDGG-TLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD  153 (483)
Q Consensus        75 ~~~avK~~~~~~~~~~~~lv~E~~~g~-~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~  153 (483)
                      +++|.-....... ...|+|+|+++|. +|.+++......+......++.+++..+.-||..||+|+|++|.|||+..++
T Consensus        77 ~pva~~~~r~~~~-~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~  155 (206)
T PF06293_consen   77 EPVAYGERRKGGG-YRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDD  155 (206)
T ss_pred             cEEEEEEEcCCCc-eeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCC
Confidence            4555543332222 3448999999985 7899888755577888899999999999999999999999999999997554


Q ss_pred             CCCcEEEeecccceec
Q 048594          154 ENATLKATDFGLAFFF  169 (483)
Q Consensus       154 ~~~~ikl~Dfg~a~~~  169 (483)
                      ....+.++||+-+...
T Consensus       156 ~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  156 GQYRFYLIDLDRMRFR  171 (206)
T ss_pred             CceeEEEEcchhceeC
Confidence            4568999999987653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=98.54  E-value=2.3e-07  Score=76.37  Aligned_cols=61  Identities=30%  Similarity=0.402  Sum_probs=54.4

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ....+..+|..+|.|+        ||+|+.+||..+.  ++. .+..+..++..+|.|+||.||++||+..+
T Consensus        46 ~~~~l~w~F~~lD~d~--------DG~Ls~~EL~~~~--l~~-~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl  106 (116)
T cd00252          46 CKDPVGWMFNQLDGNY--------DGKLSHHELAPIR--LDP-NEHCIKPFFESCDLDKDGSISLDEWCYCF  106 (116)
T ss_pred             HHHHHHHHHHHHCCCC--------CCcCCHHHHHHHH--ccc-hHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            4577899999999999        9999999999877  332 57788999999999999999999999988

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.53  E-value=6.8e-07  Score=85.50  Aligned_cols=79  Identities=22%  Similarity=0.300  Sum_probs=65.9

Q ss_pred             cCeEEEeccCCC-ChHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC----CCCCcEEEee
Q 048594           90 EGYLKREHCDGG-TLVDRISD--RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD----DENATLKATD  162 (483)
Q Consensus        90 ~~~lv~E~~~g~-~L~~~l~~--~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~----~~~~~ikl~D  162 (483)
                      ..++|+|++++. +|.+++..  ..+.+......++.+++..+.-||..||+|+|+++.|||+..+    +....+.|+|
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID  188 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVID  188 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence            348999999986 78888753  3456677888999999999999999999999999999999641    2357899999


Q ss_pred             ccccee
Q 048594          163 FGLAFF  168 (483)
Q Consensus       163 fg~a~~  168 (483)
                      |+.+..
T Consensus       189 l~r~~~  194 (268)
T PRK15123        189 LHRAQI  194 (268)
T ss_pred             CCcccc
Confidence            998754

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.52  E-value=5.8e-07  Score=83.56  Aligned_cols=112  Identities=26%  Similarity=0.416  Sum_probs=83.1

Q ss_pred             eeeecccCceeEEEEEECCCCCEEEEEEeccCCC-------------------------------CC-----cCeEEEec
Q 048594           54 AEELCRGESGRIYLCTENSTGLQFACKSISKTSK-------------------------------SD-----EGYLKREH   97 (483)
Q Consensus        54 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------------------------------~~-----~~~lv~E~   97 (483)
                      .+.|+.|..+.||++.... |..+++|.......                               ..     ..++||||
T Consensus         3 ~~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~   81 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER   81 (223)
T ss_pred             ceecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence            3678999999999998753 68899999765321                               00     12799999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------------
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-------------------------------------------  134 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~-------------------------------------------  134 (483)
                      ++|.++.+.+.. ..+++.....++.+++.+|..||+                                           
T Consensus        82 i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (223)
T cd05154          82 VDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL  160 (223)
T ss_pred             eCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence            999888776532 356777777777888888887773                                           


Q ss_pred             -------------CCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594          135 -------------NGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus       135 -------------~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                                   ..++|+|+.|.||+++.+ ..+.+.|+||+.+..
T Consensus       161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~  206 (223)
T cd05154         161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEecccccc
Confidence                         236899999999999421 145689999998765

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.50  E-value=4.8e-07  Score=84.29  Aligned_cols=110  Identities=18%  Similarity=0.269  Sum_probs=87.1

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------------
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------------   88 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------------   88 (483)
                      +.+...||-|--+.||.|.+. .|.++|||.=+....+                                          
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            456788999999999999987 6899999985433210                                          


Q ss_pred             --------CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEE
Q 048594           89 --------DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA  160 (483)
Q Consensus        89 --------~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl  160 (483)
                              +...+|||+++|..|...     +++.+.+..++..|++-+..+-..|+||+|+++-||++   ++++.+.+
T Consensus       172 ~VP~P~~~nRHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV---~~dg~~~v  243 (304)
T COG0478         172 KVPKPIAWNRHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV---TEDGDIVV  243 (304)
T ss_pred             CCCCccccccceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE---ecCCCEEE
Confidence                    001899999999777554     33466777788888888888889999999999999999   56778999


Q ss_pred             eecccceec
Q 048594          161 TDFGLAFFF  169 (483)
Q Consensus       161 ~Dfg~a~~~  169 (483)
                      +||--+...
T Consensus       244 IDwPQ~v~~  252 (304)
T COG0478         244 IDWPQAVPI  252 (304)
T ss_pred             EeCcccccC
Confidence            999876554

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=98.48  E-value=3.3e-07  Score=72.03  Aligned_cols=66  Identities=20%  Similarity=0.341  Sum_probs=56.0

Q ss_pred             hhHHHHHHhhcCCC-CccchhccccccccHHHHHHHHh-hCCCC-C----hHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKP-SNILIRIMISIYITADELEAAFK-EYNMG-D----DATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~-~~~~~~~~~~g~i~~~el~~~~~-~~~~~-~----~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ...+...|..|+.. |+       +|+|+.+||+.+|. .+|.. +    +++++.+|..+|.|++|.|+|+||+.+|..
T Consensus         7 i~~~~~~f~~y~~~~~~-------~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~   79 (88)
T cd05030           7 IETIINVFHQYSVRKGH-------PDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIK   79 (88)
T ss_pred             HHHHHHHHHHHhccCCC-------cccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence            35677899999965 32       79999999999997 45544 5    899999999999999999999999998864

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>PF14658 EF-hand_9: EF-hand domain

Probab=98.47  E-value=4.3e-07  Score=65.61  Aligned_cols=60  Identities=15%  Similarity=0.424  Sum_probs=55.7

Q ss_pred             HHHhhcCCCCccchhccccccccHHHHHHHHhhCCC-C-ChHHHHHHHHHHcCCCC-CcccHHHHHHHHHc
Q 048594          390 KDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM-G-DDATIKEIMFEVDRDKD-GRISYEEFCATMKT  457 (483)
Q Consensus       390 ~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~-~-~~~~~~~~~~~~d~~~~-g~i~~~ef~~~~~~  457 (483)
                      .+|.+||+++        .|.|...+|..+|+.++. . ++.+++.+..++|+++. |.|+|+.|+.+|+.
T Consensus         2 ~~F~~fD~~~--------tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~   64 (66)
T PF14658_consen    2 TAFDAFDTQK--------TGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD   64 (66)
T ss_pred             cchhhcCCcC--------CceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence            3799999999        999999999999999987 5 88999999999999877 99999999999974

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=98.45  E-value=7.2e-07  Score=73.79  Aligned_cols=96  Identities=21%  Similarity=0.390  Sum_probs=75.8

Q ss_pred             hcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccchhcccccc
Q 048594          331 QMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIY  410 (483)
Q Consensus       331 ~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~~~~~~~g~  410 (483)
                      .|-.||.|.+|.++|..+++.+....+                          .+-++.-+|+.||-|+        +++
T Consensus        79 ~FSeDG~GnlsfddFlDmfSV~sE~AP--------------------------rdlK~~YAFkIYDfd~--------D~~  124 (189)
T KOG0038|consen   79 VFSEDGRGNLSFDDFLDMFSVFSEMAP--------------------------RDLKAKYAFKIYDFDG--------DEF  124 (189)
T ss_pred             HhccCCCCcccHHHHHHHHHHHHhhCh--------------------------HHhhhhheeEEeecCC--------CCc
Confidence            345689999999999988886531111                          1235566999999999        999


Q ss_pred             ccHHHHHHHHhhCCCC--ChHHHH----HHHHHHcCCCCCcccHHHHHHHHHcCCC
Q 048594          411 ITADELEAAFKEYNMG--DDATIK----EIMFEVDRDKDGRISYEEFCATMKTGTH  460 (483)
Q Consensus       411 i~~~el~~~~~~~~~~--~~~~~~----~~~~~~d~~~~g~i~~~ef~~~~~~~~~  460 (483)
                      |-..+|.+.+..+-..  +++++.    .++.+.|.|+||+++|.||..++.+..+
T Consensus       125 i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~raPD  180 (189)
T KOG0038|consen  125 IGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILRAPD  180 (189)
T ss_pred             ccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHhCcc
Confidence            9999999999988433  666654    4567899999999999999999987765

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.43  E-value=8.3e-06  Score=82.08  Aligned_cols=182  Identities=19%  Similarity=0.220  Sum_probs=130.8

Q ss_pred             CceeEEEEEECCCCCEEEEEEeccCCCCCc----------------------------------CeEEEeccCC-CChHH
Q 048594           61 ESGRIYLCTENSTGLQFACKSISKTSKSDE----------------------------------GYLKREHCDG-GTLVD  105 (483)
Q Consensus        61 ~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------------------------------~~lv~E~~~g-~~L~~  105 (483)
                      ...+.|+|..+.+|..|++|+++.......                                  .++|++|.++ ++|.+
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d  367 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD  367 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence            456889999999999999999944332111                                  1899999876 35776


Q ss_pred             HHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594          106 RISD---------------RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus       106 ~l~~---------------~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      +...               +...+|..+|.++.||..||.++|+.|+.-+-|.|.+|+++   ...+|+|+--|....+.
T Consensus       368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~---G~~RIriS~C~i~Dvl~  444 (655)
T KOG3741|consen  368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVT---GKMRIRISGCGIMDVLQ  444 (655)
T ss_pred             HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEee---CcceEEEecccceeeec
Confidence            5432               23478899999999999999999999999999999999994   45578888777665543


Q ss_pred             CCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh-HHH-HHHHHccccCCCCCCCCCCCHH
Q 048594          171 EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL-YGT-LTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~-~~~-~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      +..           .  +.+.   --++-|.-.||.+++-|.+|..--+..+. ... +..|.           +.++.+
T Consensus       445 ~d~-----------~--~~le---~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~-----------~~yS~D  497 (655)
T KOG3741|consen  445 EDP-----------T--EPLE---SQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT-----------TTYSTD  497 (655)
T ss_pred             CCC-----------C--cchh---HHhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh-----------hhhhHH
Confidence            322           0  1111   12457999999999999999765332221 111 22222           467889


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ++++|.-+...+++. -++.+++.|
T Consensus       498 ~rn~v~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  498 LRNVVEYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             HHHHHHHHHhcCccc-ccHHHHHHH
Confidence            999999998888876 577777664

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.40  E-value=2.3e-06  Score=88.60  Aligned_cols=116  Identities=16%  Similarity=0.244  Sum_probs=86.4

Q ss_pred             cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           90 EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACH-SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH-~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      ..|||+|-+.  .|..++++.+   ...+..-+.||+.||.||| ..+++|++|..++|++   +..|..||++|..+..
T Consensus        83 ~~ylvTErV~--Pl~~~lk~l~---~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~  154 (690)
T KOG1243|consen   83 TLYLVTERVR--PLETVLKELG---KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSK  154 (690)
T ss_pred             ceEEEeeccc--cHHHHHHHhH---HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEec
Confidence            3499999985  4777776544   6777888999999999998 5689999999999999   7889999999998765


Q ss_pred             ccCCce-ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCC
Q 048594          169 FEEGKV-YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGA  215 (483)
Q Consensus       169 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~  215 (483)
                      ...... .....---.|..|+.+....  -..|.|-||+++++++.|.
T Consensus       155 ~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  155 ASGFNAPAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             cccCCcccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence            432221 11112222366676553322  3469999999999999993

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.38  E-value=1.7e-06  Score=79.01  Aligned_cols=109  Identities=20%  Similarity=0.273  Sum_probs=81.9

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC----------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG----------------------------------   91 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------   91 (483)
                      -+.+.|.+.+++-......|.+..  ..|..+++|.........+.                                  
T Consensus        28 i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl  105 (229)
T PF06176_consen   28 ILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL  105 (229)
T ss_pred             HHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence            346789999999887777776665  44789999998764311100                                  


Q ss_pred             -------------eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           92 -------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        92 -------------~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                                   +++|||++|..|.+..    .+++    .+...|.+++.-||+.|++|+|..|.|+++.    ++.+
T Consensus       106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~----~i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~----~~~i  173 (229)
T PF06176_consen  106 AAEKKIFRYTSSYVLLMEYIEGVELNDIE----DIDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS----NNGI  173 (229)
T ss_pred             eeeeeeccceeEEEEEEEEecCeecccch----hcCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE----CCcE
Confidence                         5899999998887653    2333    2446677889999999999999999999994    3359


Q ss_pred             EEeeccccee
Q 048594          159 KATDFGLAFF  168 (483)
Q Consensus       159 kl~Dfg~a~~  168 (483)
                      +++||+..+.
T Consensus       174 ~iID~~~k~~  183 (229)
T PF06176_consen  174 RIIDTQGKRM  183 (229)
T ss_pred             EEEECccccc
Confidence            9999987654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]

Probab=98.35  E-value=4.1e-06  Score=91.79  Aligned_cols=127  Identities=18%  Similarity=0.351  Sum_probs=104.4

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCC--HH-----HHHHHHHhccCCCCCce----------
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLT--EV-----DVKQYMQAADIDGNGTT----------  376 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~--~~-----~~~~l~~~~d~~~~g~~----------  376 (483)
                      .+..+++.+.++.-+|+.||.+.+|.|+.++|+.+|+.+|++++  ++     ++++++...|++.+|++          
T Consensus      2244 ~~GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi 2323 (2399)
T KOG0040|consen 2244 HNGVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMI 2323 (2399)
T ss_pred             cCCCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHH
Confidence            34578899999999999999999999999999999999999873  33     78999999999999981          


Q ss_pred             -eechhhhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHH----cC----CCCCccc
Q 048594          377 -LNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEV----DR----DKDGRIS  447 (483)
Q Consensus       377 -~~~~~~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~----d~----~~~g~i~  447 (483)
                       ....++.+.+.+..+|+.+|. |        .-||+..++.+.|      ++++++-+|..+    |+    ...+.+.
T Consensus      2324 ~~ETeNI~s~~eIE~AfraL~a-~--------~~yvtke~~~~~l------treqaefc~s~m~~~~e~~~~~s~q~~l~ 2388 (2399)
T KOG0040|consen 2324 SKETENILSSEEIEDAFRALDA-G--------KPYVTKEELYQNL------TREQAEFCMSKMKPYAETSSGRSDQVALD 2388 (2399)
T ss_pred             hcccccccchHHHHHHHHHhhc-C--------CccccHHHHHhcC------CHHHHHHHHHHhhhhcccccCCCcccccc
Confidence             222455667899999999999 6        5899999998765      677777777654    33    2346799


Q ss_pred             HHHHHHHH
Q 048594          448 YEEFCATM  455 (483)
Q Consensus       448 ~~ef~~~~  455 (483)
                      |.+|++-+
T Consensus      2389 y~dfv~sl 2396 (2399)
T KOG0040|consen 2389 YKDFVNSL 2396 (2399)
T ss_pred             HHHHHHHH
Confidence            99999865

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.33  E-value=1.8e-06  Score=76.98  Aligned_cols=79  Identities=22%  Similarity=0.312  Sum_probs=68.0

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhch---hHHHHHHhhcCC
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCK---DTSLKDFNIFTK  397 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~---~~~~~~F~~~d~  397 (483)
                      -++.++.+|..+|+|++|+|+..||..+|..+|..++.+-.+-|+..+|..++|.+..-.++.+-   ..+-++|+.+|+
T Consensus       122 ~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~lt~~Fr~~D~  201 (221)
T KOG0037|consen  122 YINQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQRLTEAFRRRDT  201 (221)
T ss_pred             HHHHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHHHHHHHHHHhcc
Confidence            45678999999999999999999999999999999999999999999998877776555555543   345678999999


Q ss_pred             CC
Q 048594          398 PS  399 (483)
Q Consensus       398 ~~  399 (483)
                      +.
T Consensus       202 ~q  203 (221)
T KOG0037|consen  202 AQ  203 (221)
T ss_pred             cc
Confidence            88

>PTZ00183 centrin; Provisional

Probab=98.33  E-value=1.3e-06  Score=76.86  Aligned_cols=92  Identities=20%  Similarity=0.149  Sum_probs=63.3

Q ss_pred             HHHHHHHHhccCCCCCceeechhhhchh---------HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC-CCC-C
Q 048594          359 VDVKQYMQAADIDGNGTTLNLSLVQCKD---------TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY-NMG-D  427 (483)
Q Consensus       359 ~~~~~l~~~~d~~~~g~~~~~~~~~~~~---------~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~-~~~-~  427 (483)
                      .++..+|..+|.+++|.+........-.         .+..+|..+|.++        +|.|+.+|+..++... ... .
T Consensus        17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~--------~g~i~~~eF~~~~~~~~~~~~~   88 (158)
T PTZ00183         17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDG--------SGKIDFEEFLDIMTKKLGERDP   88 (158)
T ss_pred             HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC--------CCcEeHHHHHHHHHHHhcCCCc
Confidence            3466678888888888744433322211         1466788888888        7888888888776653 222 5


Q ss_pred             hHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          428 DATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       428 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      .+.++.+|..+|.+++|.|+.+||..++...
T Consensus        89 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~  119 (158)
T PTZ00183         89 REEILKAFRLFDDDKTGKISLKNLKRVAKEL  119 (158)
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence            6677788888888888888888888887653

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=98.32  E-value=1.5e-06  Score=68.08  Aligned_cols=56  Identities=20%  Similarity=0.348  Sum_probs=45.6

Q ss_pred             HHHhhHHHHHhhcCC-CCCCCcCHHHHHHHHHh-cCCCCCH-HHHHHHHHhccCCCCCc
Q 048594          320 EEIQKHKETFKQMDT-NDSGTLTYDEFKAGLSK-LGSTLTE-VDVKQYMQAADIDGNGT  375 (483)
Q Consensus       320 ~~~~~l~~~F~~~D~-d~~G~l~~~el~~~l~~-~~~~~~~-~~~~~l~~~~d~~~~g~  375 (483)
                      .-+..+.++|+.||. +++|+|+..||+.+++. +|..++. +++++|++.+|.|+||.
T Consensus         5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~   63 (89)
T cd05022           5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSK   63 (89)
T ss_pred             HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCC
Confidence            446689999999999 99999999999999999 8877776 66777766666555554

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=98.29  E-value=3.2e-06  Score=66.28  Aligned_cols=57  Identities=21%  Similarity=0.308  Sum_probs=48.9

Q ss_pred             HHHhhHHHHHhhcC-CCCCC-CcCHHHHHHHHHh-----cCCCCCHHHHHHHHHhccCCCCCce
Q 048594          320 EEIQKHKETFKQMD-TNDSG-TLTYDEFKAGLSK-----LGSTLTEVDVKQYMQAADIDGNGTT  376 (483)
Q Consensus       320 ~~~~~l~~~F~~~D-~d~~G-~l~~~el~~~l~~-----~~~~~~~~~~~~l~~~~d~~~~g~~  376 (483)
                      .-+..+.++|+.+| .|++| +|+.+||+.+|+.     +|..+++++++++++.+|.|++|.+
T Consensus         5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v   68 (88)
T cd05027           5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGEC   68 (88)
T ss_pred             HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcC
Confidence            34568999999998 89999 5999999999999     8888888888888888887777663

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]

Probab=98.24  E-value=2.4e-06  Score=74.74  Aligned_cols=67  Identities=21%  Similarity=0.365  Sum_probs=61.6

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      .......|+.||.+.        ||||+..||+..+.++|.+ +---++.+|.++|.|.||+|||.||+=+++...
T Consensus        98 Ik~~~~~Fk~yDe~r--------DgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaa  165 (244)
T KOG0041|consen   98 IKDAESMFKQYDEDR--------DGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAA  165 (244)
T ss_pred             HHHHHHHHHHhcccc--------cccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHh
Confidence            345677999999999        9999999999999999999 888999999999999999999999999987665

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.19  E-value=4.3e-06  Score=86.74  Aligned_cols=110  Identities=18%  Similarity=0.248  Sum_probs=81.2

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------c---C--------------------
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------E---G--------------------   91 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------~---~--------------------   91 (483)
                      ..|+.++.|.||+|+-+. |+.||||+.++.-...                    .   .                    
T Consensus       131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            679999999999999874 9999999987753110                    0   0                    


Q ss_pred             --------------------------------eEEEeccCCCChHHH--HhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 048594           92 --------------------------------YLKREHCDGGTLVDR--ISDRERYTERAAASVFRSVVNALHACHSNGI  137 (483)
Q Consensus        92 --------------------------------~lv~E~~~g~~L~~~--l~~~~~l~~~~~~~i~~qil~~l~~LH~~~i  137 (483)
                                                      .++|||++|-.+.+.  +.. ..++...+.....++  .+..+-..|+
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~--f~~q~~~dgf  286 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRA--FLRQLLRDGF  286 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHH--HHHHHHhcCc
Confidence                                            899999999988887  444 345533333322222  1334445899


Q ss_pred             eeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594          138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus       138 vH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      .|.|.+|.||++   ...+.+.+.|||+...+++
T Consensus       287 fHaDpHpGNi~v---~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         287 FHADPHPGNILV---RSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             cccCCCccceEE---ecCCcEEEEcCcceecCCH
Confidence            999999999999   5678999999999887654

>smart00027 EH Eps15 homology domain

Probab=98.16  E-value=7.6e-06  Score=65.56  Aligned_cols=52  Identities=31%  Similarity=0.413  Sum_probs=41.8

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccC
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADI  370 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~  370 (483)
                      ++.+++..++++|..+|.|++|.|+.+||+.+++.+|  ++++++++++..+|.
T Consensus         4 ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~   55 (96)
T smart00027        4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADI   55 (96)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcC
Confidence            5678889999999999999999999999999999865  455555555544443

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.15  E-value=8.6e-06  Score=89.15  Aligned_cols=172  Identities=18%  Similarity=0.230  Sum_probs=124.7

Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEe--ecccceecc
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKAT--DFGLAFFFE  170 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~--Dfg~a~~~~  170 (483)
                      +..++|...++...++..+..+...++.+..++++||.|+|+..+.|.-+......-...+..+.+..+  ||+.+..+.
T Consensus       263 v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~  342 (1351)
T KOG1035|consen  263 VLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLP  342 (1351)
T ss_pred             HHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCC
Confidence            444788888899999888999999999999999999999999976666555443322222344455555  888888776


Q ss_pred             CCceecccccCCcccCccccCCCCCCC--cCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH-
Q 048594          171 EGKVYEEVVGTPLYMAPELLGPCKYGK--EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS-  247 (483)
Q Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~--~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-  247 (483)
                      ..........+..+.+||......+..  ..|+|.+|..+..+..|..+-..   ......++           +..+. 
T Consensus       343 d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~---~~~~~~~l-----------~~~~~~  408 (1351)
T KOG1035|consen  343 DNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEK---SAVPVSLL-----------DVLSTS  408 (1351)
T ss_pred             CcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCccccc---ccchhhhh-----------ccccch
Confidence            555444455566788888887655544  46999999999999988765311   11111111           11222 


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      +..+++.+|+.-++++|+++.+++.|+|.+.
T Consensus       409 ~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~  439 (1351)
T KOG1035|consen  409 ELLDALPKCLDEDSEERLSALELLTHPFLRF  439 (1351)
T ss_pred             hhhhhhhhhcchhhhhccchhhhhhchhccc
Confidence            6788999999999999999999999999874

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.14  E-value=1.6e-05  Score=73.54  Aligned_cols=118  Identities=19%  Similarity=0.240  Sum_probs=83.0

Q ss_pred             cccceEEee---eecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC--------------------------------
Q 048594           47 IKLHFTIAE---ELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------------   91 (483)
Q Consensus        47 i~~~y~~~~---~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------------------------------   91 (483)
                      +..+..+..   .|.+|--+.||+|.. ..+..+|+|++......-..                                
T Consensus        43 L~~rg~i~~~~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~N  121 (268)
T COG1718          43 LLSRGVITELVGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRN  121 (268)
T ss_pred             HhcCCceeeeEeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHH
Confidence            344444544   455677779999886 36889999998764311000                                


Q ss_pred             --------------------eEEEeccCCC-ChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEE
Q 048594           92 --------------------YLKREHCDGG-TLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIF  149 (483)
Q Consensus        92 --------------------~lv~E~~~g~-~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll  149 (483)
                                          .|||||+... ...-.|+.. +++...+..+..++++.+.-|-. .++||+||+.-|||+
T Consensus       122 L~R~~eAGVrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv-~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~  200 (268)
T COG1718         122 LKRAYEAGVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDV-PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILV  200 (268)
T ss_pred             HHHHHHcCCCCCCceeecCCeEEEEeccCCCCCCCCcccC-CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEE
Confidence                                8999998653 111122222 23334788889999999998887 899999999999999


Q ss_pred             eeCCCCCcEEEeecccceecc
Q 048594          150 TTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus       150 ~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      .    .+.+.++|+|.|....
T Consensus       201 ~----~~~p~iID~~QaV~~~  217 (268)
T COG1718         201 H----DGEPYIIDVSQAVTID  217 (268)
T ss_pred             E----CCeEEEEECccccccC
Confidence            3    5689999999887654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	483
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		3e-49
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-47
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-47
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-47
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		3e-46
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-45
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		7e-45
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		4e-43
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-42
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-40
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		6e-40
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		7e-40
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		7e-40
3soa_A	444	Full-Length Human Camkii Length = 444		2e-39
2jam_B	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-39
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-39
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		3e-39
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-39
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		4e-39
3kk8_A	284	Camkii Substrate Complex A Length = 284		5e-39
3kk9_A	282	Camkii Substrate Complex B Length = 282		5e-39
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-38
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-38
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-38
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		4e-38
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-37
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		3e-37
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		3e-37
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		4e-37
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		5e-37
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		6e-37
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		1e-36
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-36
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		3e-36
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		3e-36
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		4e-36
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		4e-36
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		4e-36
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		5e-36
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		9e-36
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		1e-35
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		1e-35
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		1e-35
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-35
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		1e-35
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		1e-35
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-35
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-35
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-35
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		3e-35
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		6e-35
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		8e-35
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		8e-35
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		1e-34
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		2e-34
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		2e-34
2oza_A	356	Structure Of P38alpha Complex Length = 356		2e-34
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		2e-34
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		3e-34
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		3e-34
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		3e-34
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		3e-34
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		3e-34
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		3e-34
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		5e-34
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		6e-34
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		9e-34
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		9e-34
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		1e-33
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		1e-33
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-33
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		4e-33
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-32
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-32
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-32
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-32
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		1e-32
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		3e-32
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		3e-32
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		4e-32
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		4e-32
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		5e-32
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		1e-31
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		1e-31
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		5e-31
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-29
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-29
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		3e-29
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		5e-29
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-28
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		2e-28
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-28
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-28
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-28
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-28
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		3e-28
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		6e-28
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		8e-28
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-27
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		1e-27
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-27
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-27
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		3e-27
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		6e-27
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		8e-27
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		1e-26
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		1e-26
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		2e-26
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-26
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		3e-26
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		4e-26
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		5e-26
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		6e-26
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		6e-26
2aao_A	166	Regulatory Apparatus Of Calcium Dependent Protein K		6e-26
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		6e-26
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		8e-26
4fie_A	423	Full-Length Human Pak4 Length = 423		9e-26
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		9e-26
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		3e-25
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		4e-25
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		8e-25
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		3e-24
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		5e-24
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		8e-24
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		1e-23
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		1e-23
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-23
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-23
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-23
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-23
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-23
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		3e-23
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		3e-23
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		3e-23
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		3e-23
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		4e-23
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		4e-23
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		4e-23
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		4e-23
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-23
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-23
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		5e-23
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		6e-23
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		6e-23
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		6e-23
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		6e-23
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		7e-23
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		7e-23
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		7e-23
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		7e-23
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		7e-23
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		7e-23
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		7e-23
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		7e-23
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		7e-23
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		8e-23
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		8e-23
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		8e-23
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		8e-23
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		8e-23
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		8e-23
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		8e-23
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		8e-23
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		8e-23
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		9e-23
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		9e-23
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		9e-23
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		9e-23
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		9e-23
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		9e-23
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		9e-23
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		1e-22
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		1e-22
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		1e-22
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		1e-22
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-22
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		1e-22
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-22
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		1e-22
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-22
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-22
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-22
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-22
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-22
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		2e-22
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		2e-22
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		4e-22
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		4e-22
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		5e-22
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		6e-22
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-21
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-21
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-21
1s6i_A	188	Ca2+-Regulatory Region (Cld) From Soybean Calcium-D		3e-21
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		3e-21
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		4e-21
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		5e-21
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		5e-21
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		8e-21
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-20
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-20
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		2e-20
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		2e-20
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		3e-20
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		3e-20
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		3e-20
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		3e-20
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		3e-20
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		3e-20
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		3e-20
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		4e-20
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		4e-20
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		4e-20
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		4e-20
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		4e-20
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		7e-20
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		9e-20
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		1e-19
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-19
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-19
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-19
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		3e-19
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-19
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		4e-19
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		4e-19
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		4e-19
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		4e-19
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		5e-19
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		5e-19
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		6e-19
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		6e-19
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		7e-19
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		7e-19
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		7e-19
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		7e-19
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		8e-19
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		8e-19
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		8e-19
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		8e-19
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		8e-19
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		8e-19
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		8e-19
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		8e-19
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		8e-19
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		8e-19
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		8e-19
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		9e-19
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		9e-19
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		9e-19
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		9e-19
4ae6_A	343	Structure And Function Of The Human Sperm-specific		9e-19
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		9e-19
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		9e-19
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		9e-19
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		9e-19
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		1e-18
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		1e-18
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		1e-18
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-18
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-18
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		1e-18
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		1e-18
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		1e-18
3g51_A	325	Structural Diversity Of The Active Conformation Of		1e-18
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-18
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		1e-18
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		1e-18
4ae9_A	343	Structure And Function Of The Human Sperm-specific		1e-18
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-18
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		1e-18
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-18
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		1e-18
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-18
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		1e-18
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		1e-18
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-18
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		2e-18
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-18
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		2e-18
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-18
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		2e-18
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-18
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		2e-18
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		2e-18
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-18
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-18
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-18
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		3e-18
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		3e-18
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		4e-18
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		4e-18
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		4e-18
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		4e-18
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		4e-18
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		4e-18
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		4e-18
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		4e-18
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		4e-18
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		4e-18
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		4e-18
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		5e-18
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		5e-18
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		5e-18
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		5e-18
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		5e-18
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		5e-18
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		7e-18
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		7e-18
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		7e-18
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		9e-18
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-17
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		1e-17
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		1e-17
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-17
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		1e-17
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-17
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-17
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		1e-17
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		1e-17
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-17
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		1e-17
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		1e-17
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		1e-17
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-17
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		2e-17
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-17
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-17
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-17
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-17
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		2e-17
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		2e-17
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-17
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		2e-17
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-17
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-17
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-17
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-17
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-17
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		2e-17
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		2e-17
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-17
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		2e-17
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		3e-17
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		3e-17
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		4e-17
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		5e-17
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		5e-17
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		5e-17
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		1e-16
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-16
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		1e-16
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-16
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-16
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-16
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		2e-16
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-16
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		3e-16
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-16
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		3e-16
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-16
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		5e-16
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-16
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		7e-16
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		7e-16
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		7e-16
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		8e-16
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		9e-16
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		9e-16
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-15
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		1e-15
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		1e-15
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		1e-15
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		1e-15
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		1e-15
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		3e-15
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		3e-15
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		3e-15
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-15
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		3e-15
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		3e-15
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		3e-15
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		3e-15
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		3e-15
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		3e-15
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		3e-15
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		3e-15
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		3e-15
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		3e-15
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		3e-15
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-15
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		3e-15
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		3e-15
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		3e-15
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		3e-15
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		3e-15
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-15
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		4e-15
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		4e-15
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		4e-15
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-15
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		4e-15
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		6e-15
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-15
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		6e-15
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		7e-15
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		8e-15
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		9e-15
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-14
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		1e-14
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		1e-14
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-14
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-14
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		1e-14
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		1e-14
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		1e-14
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		2e-14
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-14
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		2e-14
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		2e-14
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-14
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		2e-14
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		2e-14
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		2e-14
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		2e-14
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-14
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		2e-14
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		2e-14
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		2e-14
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		2e-14
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		2e-14
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		2e-14
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		2e-14
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		2e-14
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-14
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		2e-14
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		2e-14
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		3e-14
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		3e-14
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-14
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		3e-14
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		4e-14
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		4e-14
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		4e-14
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		6e-14
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		7e-14
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		8e-14
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		9e-14
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		9e-14
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		9e-14
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-13
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-13
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-13
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-13
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-13
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-13
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-13
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		1e-13
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-13
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-13
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		1e-13
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-13
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-13
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		1e-13
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-13
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-13
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		1e-13
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-13
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-13
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		2e-13
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		2e-13
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-13
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		2e-13
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-13
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		2e-13
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		2e-13
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		2e-13
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		2e-13
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		2e-13
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-13
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-13
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		2e-13
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-13
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		2e-13
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-13
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-13
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		2e-13
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		2e-13
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		2e-13
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		2e-13
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		2e-13
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		2e-13
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		2e-13
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-13
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-13
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-13
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-13
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-13
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-13
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		2e-13
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-13
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		2e-13
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-13
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-13
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-13
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-13
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		2e-13
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-13
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-13
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-13
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		2e-13
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-13
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-13
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-13
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-13
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-13
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		3e-13
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		3e-13
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		3e-13
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		3e-13
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-13
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		3e-13
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		3e-13
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		3e-13
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		3e-13
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		3e-13
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-13
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		3e-13
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-13
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		3e-13
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		3e-13
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		3e-13
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		3e-13
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-13
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		3e-13
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		4e-13
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		4e-13
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		4e-13
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		5e-13
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		5e-13
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		5e-13
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		5e-13
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		5e-13
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		6e-13
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		7e-13
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		8e-13
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		8e-13
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		8e-13
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		8e-13
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		9e-13
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		9e-13
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		9e-13
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		9e-13
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		9e-13
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		9e-13
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		9e-13
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		1e-12
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		1e-12
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		1e-12
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		1e-12
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-12
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		1e-12
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		1e-12
4exu_A	371	Mapk13, Inactive Form Length = 371		1e-12
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-12
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-12
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-12
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-12
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-12
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		5e-12
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		5e-12
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		5e-12
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		5e-12
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		6e-12
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		6e-12
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		8e-12
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		9e-12
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		9e-12
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		9e-12
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		1e-11
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		1e-11
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-11
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		1e-11
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		1e-11
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		1e-11
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		1e-11
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		1e-11
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		1e-11
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		1e-11
1s6j_A	87	N-Terminal Region Of The Ca2+-Saturated Calcium Reg		2e-11
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-11
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		2e-11
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-11
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-11
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-11
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-11
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-11
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-11
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-11
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-11
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-11
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-11
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-11
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-11
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-11
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-11
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-11
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-11
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-11
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-11
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-11
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-11
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-11
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-11
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-11
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-11
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-11
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-11
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-11
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-11
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-11
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		2e-11
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-11
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		3e-11
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		3e-11
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-11
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		3e-11
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		3e-11
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		3e-11
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		3e-11
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		3e-11
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		3e-11
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		3e-11
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		3e-11
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		3e-11
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		3e-11
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-11
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		3e-11
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		3e-11
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		3e-11
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		4e-11
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		4e-11
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		5e-11
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		5e-11
1vrk_A	148	The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20		5e-11
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-11
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-11
1qtx_A	148	The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept		5e-11
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		5e-11
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		6e-11
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		8e-11
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		8e-11
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		8e-11
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		9e-11
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-10
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		1e-10
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		1e-10
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		1e-10
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-10
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-10
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		1e-10
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		1e-10
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		2e-10
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-10
3sg6_A	450	Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L		2e-10
3ek8_A	449	Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L		2e-10
3evu_A	449	Crystal Structure Of Calcium Bound Dimeric Gcamp2,		2e-10
3o77_A	415	The Structure Of Ca2+ Sensor (Case-16) Length = 415		2e-10
3o78_A	415	The Structure Of Ca2+ Sensor (Case-12) Length = 415		2e-10
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		2e-10
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		2e-10
3evr_A	411	Crystal Structure Of Calcium Bound Monomeric Gcamp2		2e-10
1qs7_A	145	The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti		2e-10
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		2e-10
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-10
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-10
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-10
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-10
2f2o_A	179	Structure Of Calmodulin Bound To A Calcineurin Pept		3e-10
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		3e-10
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-10
3ekh_A	449	Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER		3e-10
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		4e-10
2be6_A	150	2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC		5e-10
4djc_A	152	1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA		5e-10
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		5e-10
2wel_D	150	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		5e-10
1ooj_A	149	Structural Genomics Of Caenorhabditis Elegans : Cal		5e-10
1iq5_A	149	CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE		5e-10
2ygg_B	150	Complex Of Cambr And Cam Length = 150		5e-10
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		6e-10
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		6e-10
3sg7_A	448	Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4		7e-10
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		7e-10
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		8e-10
1prw_A	149	Crystal Structure Of Bovine Brain Ca++ Calmodulin I		8e-10
1up5_B	148	Chicken Calmodulin Length = 148		8e-10
1cdl_A	147	Target Enzyme Recognition By Calmodulin: 2.4 Angstr		8e-10
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		8e-10
3u0k_A	440	Crystal Structure Of The Genetically Encoded Calciu		8e-10
3ewt_A	154	Crystal Structure Of Calmodulin Complexed With A Pe		8e-10
1cm1_A	148	Motions Of Calmodulin-Single-Conformer Refinement L		8e-10
2vay_A	146	Calmodulin Complexed With Cav1.1 Iq Peptide Length		9e-10
2ix7_A	145	Structure Of Apo-Calmodulin Bound To Unconventional		9e-10
1cdm_A	144	Modulation Of Calmodulin Plasticity In Molecular Re		9e-10
4gow_D	144	Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX		9e-10
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		1e-09
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-09
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-09
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-09
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-09
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-09
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		1e-09
1xfu_O	149	Crystal Structure Of Anthrax Edema Factor (ef) Trun		1e-09
2bkh_B	149	Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc		1e-09
4aqr_A	149	Crystal Structure Of A Calmodulin In Complex With T		1e-09
3sg2_A	449	Crystal Structure Of Gcamp2-T116v,D381y Length = 44		2e-09
1y0v_H	146	Crystal Structure Of Anthrax Edema Factor (Ef) In C		2e-09
1k93_D	144	Crystal Structure Of The Adenylyl Cyclase Domain Of		2e-09
2bbm_A	148	Solution Structure Of A Calmodulin-Target Peptide C		2e-09
2lv6_A	148	The Complex Between Ca-calmodulin And Skeletal Musc		2e-09
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		2e-09
2vb6_B	149	Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo		3e-09
1rfj_A	149	Crystal Structure Of Potato Calmodulin Pcm6 Length		3e-09
1dmo_A	148	Calmodulin, Nmr, 30 Structures Length = 148		3e-09
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		3e-09
2k0j_A	148	Solution Structure Of Cam Complexed To Drp1p Length		3e-09
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		3e-09
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		3e-09
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		3e-09
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		4e-09
4h58_A	275	Braf In Complex With Compound 3 Length = 275		4e-09
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		4e-09
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		4e-09
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		4e-09
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		4e-09
3pm8_A	197	Cad Domain Of Pff0520w, Calcium Dependent Protein K		5e-09
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		5e-09
1deg_A	142	The Linker Of Des-Glu84 Calmodulin Is Bent As Seen		5e-09
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		6e-09
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		6e-09
1ahr_A	146	Calmodulin Mutant With A Two Residue Deletion In Th		6e-09
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		7e-09
3sg5_A	448	Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke		7e-09
3sg4_A	448	Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len		8e-09
3sg3_A	449	Crystal Structure Of Gcamp3-D380y Length = 449		8e-09
2l1w_A	149	The Solution Structure Of Soybean Calmodulin Isofor		8e-09
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		9e-09
1exr_A	148	The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca		9e-09
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-08
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		2e-08
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		2e-08
1clm_A	148	Structure Of Paramecium Tetraurelia Calmodulin At 1		2e-08
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-08
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		3e-08
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		3e-08
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		3e-08
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		4e-08
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		5e-08
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		6e-08
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		6e-08
1niw_A	148	Crystal Structure Of Endothelial Nitric Oxide Synth		6e-08
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		6e-08
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		7e-08
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		7e-08
1ggz_A	148	Crystal Structure Of The Calmodulin-Like Protein (H		8e-08
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		8e-08
1xfx_O	149	Crystal Structure Of Anthrax Edema Factor (Ef) In C		1e-07
1y6w_A	148	Trapped Intermediate Of Calmodulin Length = 148		2e-07
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		2e-07
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		2e-07
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		2e-07
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		2e-07
3khe_A	191	Crystal Structure Of The Calcium-Loaded Calmodulin-		2e-07
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-07
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		3e-07
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		3e-07
3ekj_A	449	Calcium-Free Gcamp2 (Calcium Binding Deficient Muta		3e-07
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		4e-07
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-07
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		5e-07
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		5e-07
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		5e-07
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		6e-07
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-07
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		6e-07
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		6e-07
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		6e-07
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		7e-07
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		8e-07
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		9e-07
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-06
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		1e-06
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		1e-06
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		2e-06
4ds7_A	147	Crystal Structure Of Yeast Calmodulin Bound To The		2e-06
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-06
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		2e-06
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-06
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		2e-06
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-06
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-06
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		3e-06
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-06
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		3e-06
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		3e-06
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-06
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		4e-06
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		4e-06
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		4e-06
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		5e-06
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		5e-06
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		6e-06
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		6e-06
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		7e-06
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		7e-06
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		7e-06
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		7e-06
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		7e-06
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		8e-06
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		8e-06
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		8e-06
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		8e-06
3b2t_A	311	Structure Of Phosphotransferase Length = 311		9e-06
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		9e-06
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		9e-06
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		9e-06
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-06
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-06
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-06
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		9e-06
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
3l19_A	214	Crystal Structure Of Calcium Binding Domain Of Cpcd		1e-05
2lhi_A	176	Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L		1e-05
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-05
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		1e-05
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-05
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-05
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-05
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-05
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-05
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-05
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-05
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		1e-05
3kf9_A	149	Crystal Structure Of The SdcenSKMLCK COMPLEX Length		2e-05
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-05
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		2e-05
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		2e-05
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-05
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		2e-05
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		2e-05
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-05
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		2e-05
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-05
2p6b_B	156	Crystal Structure Of Human Calcineurin In Complex W		3e-05
3qrx_A	169	Chlamydomonas Reinhardtii Centrin Bound To Melittin		3e-05
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		3e-05
3ll8_B	155	Crystal Structure Of Calcineurin In Complex With Ak		3e-05
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		3e-05
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		4e-05
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-05
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		4e-05
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		4e-05
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		4e-05
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		4e-05
3o4y_A	196	Crystal Structure Of Cad Domain Of The Plasmodium V		4e-05
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		4e-05
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		5e-05
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		5e-05
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		5e-05
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		6e-05
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-05
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		6e-05
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		6e-05
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		7e-05
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		7e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		7e-05
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		7e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		7e-05
2jnx_A	134	Nmr Derived Solution Structure Of An Ef-Hand Calciu		7e-05
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		7e-05
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		7e-05
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		7e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		8e-05
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		8e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		8e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		8e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		9e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		9e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		9e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		9e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		9e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		9e-05
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		9e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		9e-05
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-04
1lkj_A	146	Nmr Structure Of Apo Calmodulin From Yeast Saccharo		1e-04
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		1e-04
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-04
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		1e-04
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		1e-04
1tco_B	169	Ternary Complex Of A Calcineurin A Fragment, Calcin		1e-04
1mf8_B	170	Crystal Structure Of Human Calcineurin Complexed Wi		1e-04
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-04
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-04
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-04
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-04
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		1e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-04
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		1e-04
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		2e-04
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-04
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-04
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		2e-04
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-04
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		2e-04
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		2e-04
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		2e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-04
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		2e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		2e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		2e-04
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		2e-04
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		2e-04
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-04
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		2e-04
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		2e-04
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		2e-04
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		2e-04
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		2e-04
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		2e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		2e-04
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		2e-04
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		2e-04
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-04
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		2e-04
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		2e-04
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		3e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		3e-04
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		3e-04
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-04
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		3e-04
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		3e-04
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		3e-04
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		3e-04
3k21_A	191	Crystal Structure Of Carboxy-Terminus Of Pfc0420w L		4e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-04
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		4e-04
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		4e-04
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		4e-04
1jfj_A	134	Nmr Solution Structure Of An Ef-Hand Calcium Bindin		4e-04
2nxq_A	134	Crystal Structure Of Calcium Binding Protein 1 From		4e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		4e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-04
2lmt_A	148	Nmr Structure Of Androcam Length = 148		5e-04
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		5e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		5e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		5e-04
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		5e-04
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		6e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		6e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		6e-04
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		7e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		7e-04
1c7v_A	81	Nmr Solution Structure Of The Calcium-Bound C-Termi		8e-04
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		8e-04
3ox6_A	153	Crystal Structure Of The Calcium Sensor Calcium-Bin		9e-04
3ox5_A	153	Crystal Structure Of The Calcium Sensor Calcium-Bin		9e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		9e-04

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score =  192 bits (489), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 226/471 (47%), Gaps = 77/471 (16%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
            + I   L +G  G +  C +  T  ++A K I+K S  ++                   
Sbjct: 23  RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         Y+  E   GG L D I  R+R++E  AA + + V + +   H + I
Sbjct: 83  IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRDLKPEN +  + +++  +K  DFGL+  F++    ++ +GT  Y+APE+L    Y +
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDE 201
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           + D+WSAG+ILY LLSG  PF+ ++ Y  L  + + +  F    W TIS  AKDLIR+ML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 258 IRDPNNQITVAQILKHPWLNYENGEA---WDRPIDTAIISRVKQFRAMSKLKKLALKVIV 314
              P+ +IT  Q L+HPW+   + E     D P   + ++ ++QF+A  KL + AL  + 
Sbjct: 262 TFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMA 321
Query: 315 ENLPA-EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL---------------GSTLTE 358
             L   +E ++  E F+++DTN+ G L  DE   G  +                GST+ E
Sbjct: 322 SKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTI-E 380
Query: 359 VDVKQYMQAADIDGNG---------TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISI 409
             +   M   D+DG+G         + ++ +++  ++   + F +F K          S 
Sbjct: 381 DQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDG--------SG 432
Query: 410 YITADELEAAFKEYNMGDDAT----IKEIMFEVDRDKDGRISYEEFCATMK 456
            I+  EL   FK ++  D +     ++ I+ +VD +KDG + + EF   ++
Sbjct: 433 KISTKEL---FKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score =  187 bits (474), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 216/452 (47%), Gaps = 68/452 (15%)
Query: 57  LCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKRE--------HCD------ 99
           L +G  G + LC +  TG + A K ISK     K+D+  L RE        H +      
Sbjct: 58  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 100 ----------------GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
                           GG L D I  R+R++E  AA + R V++ +   H N I+HRDLK
Sbjct: 118 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLK 177
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWS 203
           PEN +  +  ++A ++  DFGL+  FE  K  ++ +GT  Y+APE+L    Y ++ D+WS
Sbjct: 178 PENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWS 236
Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
            G+ILY LLSG  PF   + Y  L  +   +  F+   W  +S SAKDLIR+ML   P+ 
Sbjct: 237 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 296
Query: 264 QITVAQILKHPWLNYENGE--AWDRP-IDTAIISRVKQFRAMSKLKKLALKVIVENLPAE 320
           +I+    L H W+     E  + D P +D AI++ ++QF+   KL + AL  +   L ++
Sbjct: 297 RISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYMGSKLTSQ 355
Query: 321 -EIQKHKETFKQMDTNDSGTLTYDEFKAGL-----------SKLGSTLTEVDVKQYMQAA 368
            E ++    F +MD N  G L   E   G            S L ++  E +V Q + A 
Sbjct: 356 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 415
Query: 369 DIDGNG---------TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAA 419
           D D NG           ++   +  ++   + F +F   +        S  I++ EL   
Sbjct: 416 DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDN--------SGKISSTELATI 467
Query: 420 FKEYNMGDDATIKEIMFEVDRDKDGRISYEEF 451
           F   ++ D  T K ++ EVD++ DG + ++EF
Sbjct: 468 FGVSDV-DSETWKSVLSEVDKNNDGEVDFDEF 498

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score =  187 bits (474), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 216/452 (47%), Gaps = 68/452 (15%)
Query: 57  LCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKRE--------HCD------ 99
           L +G  G + LC +  TG + A K ISK     K+D+  L RE        H +      
Sbjct: 57  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 100 ----------------GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
                           GG L D I  R+R++E  AA + R V++ +   H N I+HRDLK
Sbjct: 117 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLK 176
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWS 203
           PEN +  +  ++A ++  DFGL+  FE  K  ++ +GT  Y+APE+L    Y ++ D+WS
Sbjct: 177 PENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWS 235
Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
            G+ILY LLSG  PF   + Y  L  +   +  F+   W  +S SAKDLIR+ML   P+ 
Sbjct: 236 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 295
Query: 264 QITVAQILKHPWLNYENGE--AWDRP-IDTAIISRVKQFRAMSKLKKLALKVIVENLPAE 320
           +I+    L H W+     E  + D P +D AI++ ++QF+   KL + AL  +   L ++
Sbjct: 296 RISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYMGSKLTSQ 354
Query: 321 -EIQKHKETFKQMDTNDSGTLTYDEFKAGL-----------SKLGSTLTEVDVKQYMQAA 368
            E ++    F +MD N  G L   E   G            S L ++  E +V Q + A 
Sbjct: 355 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 414
Query: 369 DIDGNG---------TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAA 419
           D D NG           ++   +  ++   + F +F   +        S  I++ EL   
Sbjct: 415 DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDN--------SGKISSTELATI 466
Query: 420 FKEYNMGDDATIKEIMFEVDRDKDGRISYEEF 451
           F   ++ D  T K ++ EVD++ DG + ++EF
Sbjct: 467 FGVSDV-DSETWKSVLSEVDKNNDGEVDFDEF 497

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score =  186 bits (473), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 216/452 (47%), Gaps = 68/452 (15%)
Query: 57  LCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKRE--------HCD------ 99
           L +G  G + LC +  TG + A K ISK     K+D+  L RE        H +      
Sbjct: 34  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 100 ----------------GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
                           GG L D I  R+R++E  AA + R V++ +   H N I+HRDLK
Sbjct: 94  FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLK 153
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWS 203
           PEN +  +  ++A ++  DFGL+  FE  K  ++ +GT  Y+APE+L    Y ++ D+WS
Sbjct: 154 PENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWS 212
Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
            G+ILY LLSG  PF   + Y  L  +   +  F+   W  +S SAKDLIR+ML   P+ 
Sbjct: 213 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 272
Query: 264 QITVAQILKHPWLNYENGE--AWDRP-IDTAIISRVKQFRAMSKLKKLALKVIVENLPAE 320
           +I+    L H W+     E  + D P +D AI++ ++QF+   KL + AL  +   L ++
Sbjct: 273 RISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYMGSKLTSQ 331
Query: 321 -EIQKHKETFKQMDTNDSGTLTYDEFKAGL-----------SKLGSTLTEVDVKQYMQAA 368
            E ++    F +MD N  G L   E   G            S L ++  E +V Q + A 
Sbjct: 332 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 391
Query: 369 DIDGNG---------TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAA 419
           D D NG           ++   +  ++   + F +F   +        S  I++ EL   
Sbjct: 392 DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDN--------SGKISSTELATI 443
Query: 420 FKEYNMGDDATIKEIMFEVDRDKDGRISYEEF 451
           F   ++ D  T K ++ EVD++ DG + ++EF
Sbjct: 444 FGVSDV-DSETWKSVLSEVDKNNDGEVDFDEF 474

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score =  182 bits (462), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 211/456 (46%), Gaps = 63/456 (13%)
Query: 54  AEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG---------------------- 91
            ++L  G  G + LC +  T ++ A K I KTS S                         
Sbjct: 42  VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 92  ----------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRD 141
                     YL  E   GG L D I  R ++ E  AA + + V++ +   H + I+HRD
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRD 161
Query: 142 LKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDI 201
           LKPEN +  + +++A +K  DFGL+  FE  K  +E +GT  Y+APE+L   KY ++ D+
Sbjct: 162 LKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDV 220
Query: 202 WSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP 261
           WS G+IL+ LL+G  PF  ++    L  +   +  F S  W  +S  AKDLI++ML  D 
Sbjct: 221 WSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDS 280
Query: 262 NNQITVAQILKHPWLN---YENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLP 318
             +I+  Q L+HPW+     +     + P     I  +++F+   KL + AL  +   L 
Sbjct: 281 QRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLT 340
Query: 319 A-EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL-GSTLTEVDVKQ-------YMQAAD 369
           + EE ++  + F+ +D N  G L   E   G SKL G  +   D+ Q        + AAD
Sbjct: 341 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD 400
Query: 370 IDGNG---------TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAF 420
            D NG           ++   +  KD     F  F +  N          I+ DEL + F
Sbjct: 401 FDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGN--------GKISVDELASVF 452
Query: 421 KEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
              ++ +  T KE++  +D + DG + +EEFC  ++
Sbjct: 453 GLDHL-ESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 487

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score =  179 bits (455), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 214/461 (46%), Gaps = 69/461 (14%)
Query: 54  AEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEG------------------- 91
            ++L  G  G + LC +  TG + A K I K   T+ S+ G                   
Sbjct: 9   VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 92  -----------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHR 140
                      YL  E   GG L D I  R++++E  AA + + V++     H + I+HR
Sbjct: 69  LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 128
Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEID 200
           DLKPEN +  +   +A +K  DFGL+  FE G   +E +GT  Y+APE+L   KY ++ D
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK-KYDEKCD 187
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +WS G+ILY LL G  PF  ++    L  +   +  F    W  +S  AK L++ ML  +
Sbjct: 188 VWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYE 247
Query: 261 PNNQITVAQILKHPWL----NYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVEN 316
           P+ +I+  + L HPW+    + ++ +     + T  +  +K+F++  KL + A+  +   
Sbjct: 248 PSKRISAEEALNHPWIVKFCSQKHTDVGKHAL-TGALGNMKKFQSSQKLAQAAMLFMGSK 306
Query: 317 LPA-EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL----GSTLTEVD-------VKQY 364
           L   EE ++  + F+Q+D N  G L   E   G  KL    G T++++D       V   
Sbjct: 307 LTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHI 366
Query: 365 MQAADIDGNG---------TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADE 415
           +Q+ D D NG           ++  L+  ++  L  F  F            S  IT +E
Sbjct: 367 LQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDG--------SGKITNEE 418
Query: 416 LEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           L   F    + DD T  +++ E D++ DG + +EEF   M+
Sbjct: 419 LGRLFGVTEV-DDETWHQVLQECDKNNDGEVDFEEFVEMMQ 458

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score =  178 bits (451), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 211/452 (46%), Gaps = 68/452 (15%)
Query: 57  LCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKRE--------HCD------ 99
           L +G  G + LC +  TG + A K ISK     K+D+  L RE        H +      
Sbjct: 34  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 100 ----------------GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
                           GG L D I  R+R++E  AA + R V++ +   H N I+HRDLK
Sbjct: 94  FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLK 153
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWS 203
           PEN +  +  ++A ++  DFGL+  FE  K  ++ +GT  Y+APE+L    Y ++ D+WS
Sbjct: 154 PENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWS 212
Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
            G+ILY LLSG  PF   + Y  L  +   +  F+   W  +S SAKDLIR+ L   P+ 
Sbjct: 213 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSX 272
Query: 264 QITVAQILKHPWLNYENGE--AWDRP-IDTAIISRVKQFRAMSKLKKLALKVIVENLPAE 320
           +I+    L H W+     E  + D P +D AI++ ++QF+   KL + AL      L ++
Sbjct: 273 RISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYXGSKLTSQ 331
Query: 321 -EIQKHKETFKQMDTNDSGTLTYDEFKAGL-----------SKLGSTLTEVDVKQYMQAA 368
            E ++    F + D N  G L   E   G            S L ++  E +V Q + A 
Sbjct: 332 DETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAV 391
Query: 369 DIDGNG---------TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAA 419
           D D NG            +   +  ++   + F  F   +        S  I++ EL   
Sbjct: 392 DFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDN--------SGKISSTELATI 443
Query: 420 FKEYNMGDDATIKEIMFEVDRDKDGRISYEEF 451
           F   ++ D  T K ++ EVD++ DG + ++EF
Sbjct: 444 FGVSDV-DSETWKSVLSEVDKNNDGEVDFDEF 474

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score =  172 bits (436), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 158/296 (53%), Gaps = 35/296 (11%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS-----KSDEGYLKR---------- 95
           F +  EL RG +  +Y C +  T   +A K + KT      +++ G L R          
Sbjct: 55  FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLK 114
Query: 96  -------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDL 142
                        E   GG L DRI ++  Y+ER AA   + ++ A+   H NGI+HRDL
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDL 174
Query: 143 KPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIW 202
           KPEN ++ T   +A LK  DFGL+   E   + + V GTP Y APE+L  C YG E+D+W
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMW 234
Query: 203 SAGLILYNLLSGAQPFWAE-SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP 261
           S G+I Y LL G +PF+ E         I++ E  F S  W  +S +AKDL+R++++ DP
Sbjct: 235 SVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDP 294
Query: 262 NNQITVAQILKHPWLNYENGEAWD-RPIDTAIISRVKQFRAMSKLKKLALKVIVEN 316
             ++T  Q L+HPW+    G+A +   +DTA   ++++F A  KLK  A+K +V +
Sbjct: 295 KKRLTTFQALQHPWV---TGKAANFVHMDTA-QKKLQEFNARRKLKA-AVKAVVAS 345

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score =  171 bits (432), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 151/297 (50%), Gaps = 33/297 (11%)
Query: 42  KAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS-KSDEG--------- 91
           K  EDIK  F   E L  G    + L  E +TG  FA K I K + K  E          
Sbjct: 15  KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 92  ---------------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALH 130
                                YL  +   GG L DRI ++  YTE+ A+++ R V++A++
Sbjct: 75  RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVY 134
Query: 131 ACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL 190
             H  GI+HRDLKPEN ++ + DE + +  +DFGL+    +G V     GTP Y+APE+L
Sbjct: 135 YLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVL 194
Query: 191 GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK 250
               Y K +D WS G+I Y LL G  PF+ E+       I+  E +F S  W  IS SAK
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAK 254
Query: 251 DLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKK 307
           D IR ++ +DPN + T  Q  +HPW+  +   A ++ I  ++ +++++  A SK ++
Sbjct: 255 DFIRNLMEKDPNKRYTCEQAARHPWIAGDT--ALNKNIHESVSAQIRKNFAKSKWRQ 309

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 157/335 (46%), Gaps = 51/335 (15%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSIS--KTSKSDEGYLKREH---------- 97
           ++ + EEL +G    +  C   +TGL+FA K I+  K S  D   L+RE           
Sbjct: 30  NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 89
Query: 98  --------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                                 GG L + I  RE Y+E  A+   + ++ ++  CHSNGI
Sbjct: 90  IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 149
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HR+LKPEN +  +  + A +K  DFGLA    + + +    GTP Y++PE+L    Y K
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 209
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
            +DIW+ G+ILY LL G  PFW E  +     I +   D+ S  W T++  AK LI  ML
Sbjct: 210 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 269
Query: 258 IRDPNNQITVAQILKHPWL-NYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIV-- 314
             +P  +IT  Q LK PW+ N E   +     DT  +  +K+F A  KLK   L  ++  
Sbjct: 270 TVNPKKRITADQALKVPWICNRERVASAIHRQDT--VDCLKKFNARRKLKGAILTTMIAT 327
Query: 315 --------------ENLPAEEIQKHKETFKQMDTN 335
                         E  P   I++  E+ + +D N
Sbjct: 328 RNLSNLGRNLLNKKEQGPPSTIKESSESSQTIDDN 362

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score =  161 bits (408), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 125/216 (57%), Gaps = 2/216 (0%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  +   GG L DRI ++  YTER A+ +   V++A+   H  GI+HRDLKPEN ++ +
Sbjct: 92  YLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            DE++ +  +DFGL+   + G V     GTP Y+APE+L    Y K +D WS G+I Y L
Sbjct: 152 LDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 211
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           L G  PF+ E+       I+  E +F S  W  IS SAKD IR ++ +DP  + T  Q L
Sbjct: 212 LCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL 271
Query: 272 KHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKK 307
           +HPW+  +   A D+ I  ++  ++K+  A SK K+
Sbjct: 272 QHPWIAGDT--ALDKNIHQSVSEQIKKNFAKSKWKQ 305

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score =  161 bits (408), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 125/216 (57%), Gaps = 2/216 (0%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  +   GG L DRI ++  YTER A+ +   V++A+   H  GI+HRDLKPEN ++ +
Sbjct: 92  YLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            DE++ +  +DFGL+   + G V     GTP Y+APE+L    Y K +D WS G+I Y L
Sbjct: 152 LDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 211
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           L G  PF+ E+       I+  E +F S  W  IS SAKD IR ++ +DP  + T  Q L
Sbjct: 212 LCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL 271
Query: 272 KHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKK 307
           +HPW+  +   A D+ I  ++  ++K+  A SK K+
Sbjct: 272 QHPWIAGDT--ALDKNIHQSVSEQIKKNFAKSKWKQ 305

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score =  161 bits (408), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 125/216 (57%), Gaps = 2/216 (0%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  +   GG L DRI ++  YTER A+ +   V++A+   H  GI+HRDLKPEN ++ +
Sbjct: 92  YLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            DE++ +  +DFGL+   + G V     GTP Y+APE+L    Y K +D WS G+I Y L
Sbjct: 152 LDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 211
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           L G  PF+ E+       I+  E +F S  W  IS SAKD IR ++ +DP  + T  Q L
Sbjct: 212 LCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL 271
Query: 272 KHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKK 307
           +HPW+  +   A D+ I  ++  ++K+  A SK K+
Sbjct: 272 QHPWIAGDT--ALDKNIHQSVSEQIKKNFAKSKWKQ 305

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score =  159 bits (403), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/232 (38%), Positives = 132/232 (56%), Gaps = 4/232 (1%)
Query: 86  SKSDEG--YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           S S+EG  YL  +   GG L + I  RE Y+E  A+   + ++ A+  CH  G++HR+LK
Sbjct: 78  SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLK 137
Query: 144 PENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIW 202
           PEN +  +  + A +K  DFGLA   E E + +    GTP Y++PE+L    YGK +D+W
Sbjct: 138 PENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLW 197
Query: 203 SAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN 262
           + G+ILY LL G  PFW E  +     I +   DF S  W T++  AKDLI +ML  +P+
Sbjct: 198 ACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPS 257
Query: 263 NQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIV 314
            +IT A+ LKHPW+++ +  A         +  +K+F A  KLK   L V++
Sbjct: 258 KRITAAEALKHPWISHRSTVA-SCMHRQETVDCLKKFNARRKLKGAILTVML 308

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 149/303 (49%), Gaps = 46/303 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSIS--KTSKSDEGYLKREH----------- 97
           + + EEL +G    +  C +  TG ++A K I+  K S  D   L+RE            
Sbjct: 6   YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 98  -------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIM 138
                                GG L + I  RE Y+E  A+   + ++ +++ CH NGI+
Sbjct: 66  VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIV 125
Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGK 197
           HRDLKPEN +  +  + A +K  DFGLA   + + + +    GTP Y++PE+L    YGK
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
            +D+W+ G+ILY LL G  PFW E  +     I +   DF S  W T++  AKDLI +ML
Sbjct: 186 PVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKML 245
Query: 258 IRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISR------VKQFRAMSKLKKLALK 311
             +P  +IT ++ LKHPW+         R    +++ R      +K+F A  KLK   L 
Sbjct: 246 TINPAKRITASEALKHPWIC-------QRSTVASMMHRQETVDCLKKFNARRKLKGAILT 298
Query: 312 VIV 314
            ++
Sbjct: 299 TML 301

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 88/224 (39%), Positives = 128/224 (57%), Gaps = 4/224 (1%)
Query: 86  SKSDEG--YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           S S+EG  YL  +   GG L + I  RE Y+E  A+   + ++ A+  CH  G++HRDLK
Sbjct: 89  SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLK 148
Query: 144 PENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIW 202
           PEN +  +  + A +K  DFGLA   E E + +    GTP Y++PE+L    YGK +D+W
Sbjct: 149 PENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLW 208
Query: 203 SAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN 262
           + G+ILY LL G  PFW E  +     I +   DF S  W T++  AKDLI +ML  +P+
Sbjct: 209 ACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPS 268
Query: 263 NQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLK 306
            +IT A+ LKHPW+++ +  A         +  +K+F A  KLK
Sbjct: 269 KRITAAEALKHPWISHRSTVA-SCMHRQETVDCLKKFNARRKLK 311

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score =  159 bits (402), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 149/303 (49%), Gaps = 46/303 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSIS--KTSKSDEGYLKREH----------- 97
           + + EEL +G    +  C +  TG ++A K I+  K S  D   L+RE            
Sbjct: 6   YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 98  -------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIM 138
                                GG L + I  RE Y+E  A+   + ++ +++ CH NGI+
Sbjct: 66  VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIV 125
Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGK 197
           HRDLKPEN +  +  + A +K  DFGLA   + + + +    GTP Y++PE+L    YGK
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
            +D+W+ G+ILY LL G  PFW E  +     I +   DF S  W T++  AKDLI +ML
Sbjct: 186 PVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKML 245
Query: 258 IRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISR------VKQFRAMSKLKKLALK 311
             +P  +IT ++ LKHPW+         R    +++ R      +K+F A  KLK   L 
Sbjct: 246 TINPAKRITASEALKHPWIC-------QRSTVASMMHRQETVDCLKKFNARRKLKGAILT 298
Query: 312 VIV 314
            ++
Sbjct: 299 TML 301

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score =  159 bits (401), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 129/259 (49%), Gaps = 32/259 (12%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSIS--KTSKSDEGYLKREH---------- 97
           ++ + EEL +G    +  C   +TGL+FA K I+  K S  D   L+RE           
Sbjct: 7   NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 98  --------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                                 GG L + I  RE Y+E  A+   + ++ ++  CHSNGI
Sbjct: 67  IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HR+LKPEN +  +  + A +K  DFGLA    + + +    GTP Y++PE+L    Y K
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
            +DIW+ G+ILY LL G  PFW E  +     I +   D+ S  W T++  AK LI  ML
Sbjct: 187 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 246
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P  +IT  Q LK PW+
Sbjct: 247 TVNPKKRITADQALKVPWI 265

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score =  159 bits (401), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 129/259 (49%), Gaps = 32/259 (12%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSIS--KTSKSDEGYLKREH---------- 97
           ++ + EEL +G    +  C   +TGL+FA K I+  K S  D   L+RE           
Sbjct: 7   NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 98  --------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                                 GG L + I  RE Y+E  A+   + ++ ++  CHSNGI
Sbjct: 67  IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HR+LKPEN +  +  + A +K  DFGLA    + + +    GTP Y++PE+L    Y K
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
            +DIW+ G+ILY LL G  PFW E  +     I +   D+ S  W T++  AK LI  ML
Sbjct: 187 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 246
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P  +IT  Q LK PW+
Sbjct: 247 TVNPKKRITADQALKVPWI 265

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score =  158 bits (400), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 129/259 (49%), Gaps = 32/259 (12%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSIS--KTSKSDEGYLKREH---------- 97
           ++ + EEL +G    +  C   +TGL+FA K I+  K S  D   L+RE           
Sbjct: 6   NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 65
Query: 98  --------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                                 GG L + I  RE Y+E  A+   + ++ ++  CHSNGI
Sbjct: 66  IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 125
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HR+LKPEN +  +  + A +K  DFGLA    + + +    GTP Y++PE+L    Y K
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 185
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
            +DIW+ G+ILY LL G  PFW E  +     I +   D+ S  W T++  AK LI  ML
Sbjct: 186 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 245
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P  +IT  Q LK PW+
Sbjct: 246 TVNPKKRITADQALKVPWI 264

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score =  157 bits (396), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 129/266 (48%), Gaps = 31/266 (11%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------- 89
           G    DI  ++T+   + RG  G + +  +  T ++ A K I K    D           
Sbjct: 18  GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM 77
Query: 90  -------------------EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALH 130
                              + YL  E C GG L +R+  +  + E  AA + + V++A+ 
Sbjct: 78  KSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVA 137
Query: 131 ACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL 190
            CH   + HRDLKPENF+F TD  ++ LK  DFGLA  F+ GK+    VGTP Y++P++L
Sbjct: 138 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL 197
Query: 191 GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK 250
               YG E D WSAG+++Y LL G  PF A +    +  I      F    W  +S  A+
Sbjct: 198 EGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAE 256
Query: 251 DLIRRMLIRDPNNQITVAQILKHPWL 276
            LIRR+L + P  +IT  Q L+H W 
Sbjct: 257 SLIRRLLTKSPKQRITSLQALEHEWF 282

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score =  156 bits (395), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 129/266 (48%), Gaps = 31/266 (11%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------- 89
           G    DI  ++T+   + RG  G + +  +  T ++ A K I K    D           
Sbjct: 1   GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM 60
Query: 90  -------------------EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALH 130
                              + YL  E C GG L +R+  +  + E  AA + + V++A+ 
Sbjct: 61  KSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVA 120
Query: 131 ACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL 190
            CH   + HRDLKPENF+F TD  ++ LK  DFGLA  F+ GK+    VGTP Y++P++L
Sbjct: 121 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL 180
Query: 191 GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK 250
               YG E D WSAG+++Y LL G  PF A +    +  I      F    W  +S  A+
Sbjct: 181 EGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAE 239
Query: 251 DLIRRMLIRDPNNQITVAQILKHPWL 276
            LIRR+L + P  +IT  Q L+H W 
Sbjct: 240 SLIRRLLTKSPKQRITSLQALEHEWF 265

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score =  156 bits (394), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 109/185 (58%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  +   GG L DRI ++  YTER A+ +   V++A+   H  GI+HRDLKPEN ++ +
Sbjct: 92  YLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            DE++ +  +DFGL+   + G V     GTP Y+APE+L    Y K +D WS G+I Y L
Sbjct: 152 LDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 211
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           L G  PF+ E+       I+  E +F S  W  IS SAKD IR ++ +DP  + T  Q L
Sbjct: 212 LCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL 271
Query: 272 KHPWL 276
           +HPW+
Sbjct: 272 QHPWI 276

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score =  155 bits (393), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 185/386 (47%), Gaps = 34/386 (8%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E  +GG L ++I +R ++ E  AA++ + +++ +   H + I+HRD+KPEN +   
Sbjct: 122 YLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLEN 181
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            +    +K  DFGL+ FF +     + +GT  Y+APE+L   KY ++ D+WS G+I+Y L
Sbjct: 182 KNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYIL 240
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           L G  PF  ++    +  +   +  F  + W  IS  AK+LI+ ML  D N + T  + L
Sbjct: 241 LCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEAL 300
Query: 272 KHPWL-NYENG-EAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPA-EEIQKHKET 328
              W+  Y N     D+      +S +++F    KL + A+  I   L   EE ++  + 
Sbjct: 301 NSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDI 360
Query: 329 FKQMDTNDSGTLTYDE----------FKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLN 378
           FK++D N  G L   E          FK  L +L +   EVD    ++  D D NG    
Sbjct: 361 FKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVD--NILKEVDFDKNGYIEY 418
Query: 379 LSLVQ-CKDTSL--------KDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDA 429
              +  C D  +        + FN+F            S  IT +EL   F   ++  + 
Sbjct: 419 SEFISVCMDKQILFSEERLRRAFNLFDTDK--------SGKITKEELANLFGLTSIS-EK 469
Query: 430 TIKEIMFEVDRDKDGRISYEEFCATM 455
           T  +++ E D++KD  I ++EF + M
Sbjct: 470 TWNDVLGEADQNKDNMIDFDEFVSMM 495

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score =  152 bits (385), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 135/264 (51%), Gaps = 33/264 (12%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           + I   L +G  G +  C +  T  ++A K I+K S  ++                    
Sbjct: 24  YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 92  -------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIM 138
                        Y+  E   GG L D I  R+R++E  AA + + V + +   H + I+
Sbjct: 84  MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIV 143
Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           HRDLKPEN +  + +++  +K  DFGL+  F++    ++ +GT  Y+APE+L    Y ++
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEK 202
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
            D+WSAG+ILY LLSG  PF+ ++ Y  L  + + +  F    W TIS  AKDLIR+ML 
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262
Query: 259 RDPNNQITVAQILKHPWLNYENGE 282
             P+ +IT  Q L+HPW+   + E
Sbjct: 263 FHPSLRITATQCLEHPWIQKYSSE 286

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score =  152 bits (385), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 135/264 (51%), Gaps = 33/264 (12%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           + I   L +G  G +  C +  T  ++A K I+K S  ++                    
Sbjct: 24  YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 92  -------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIM 138
                        Y+  E   GG L D I  R+R++E  AA + + V + +   H + I+
Sbjct: 84  MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIV 143
Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           HRDLKPEN +  + +++  +K  DFGL+  F++    ++ +GT  Y+APE+L    Y ++
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEK 202
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
            D+WSAG+ILY LLSG  PF+ ++ Y  L  + + +  F    W TIS  AKDLIR+ML 
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262
Query: 259 RDPNNQITVAQILKHPWLNYENGE 282
             P+ +IT  Q L+HPW+   + E
Sbjct: 263 FHPSLRITATQCLEHPWIQKYSSE 286

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score =  152 bits (385), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 133/269 (49%), Gaps = 37/269 (13%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--SKSDEGYLKRE------ 96
           ED++ H+ + EEL  G+   +  C +  TG ++A K I K   S S  G  + E      
Sbjct: 8   EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 97  -------------H---------------CDGGTLVDRISDRERYTERAAASVFRSVVNA 128
                        H                 GG L D ++++E  TE  A    + +++ 
Sbjct: 68  ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 127
Query: 129 LHACHSNGIMHRDLKPENFIFTTDD-ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
           +H  HS  I H DLKPEN +    +  N  +K  DFG+A   E G  ++ + GTP ++AP
Sbjct: 128 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 187
Query: 188 ELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS 247
           E++     G E D+WS G+I Y LLSGA PF  E+   TLT I +   DF  + +   S 
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 247
Query: 248 SAKDLIRRMLIRDPNNQITVAQILKHPWL 276
            AKD IRR+L++DP  ++ +AQ L+H W+
Sbjct: 248 LAKDFIRRLLVKDPKRRMXIAQSLEHSWI 276

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score =  152 bits (384), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/231 (38%), Positives = 126/231 (54%), Gaps = 15/231 (6%)
Query: 92  YLKREHCDGGTLVDRISDRER----YTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           Y+  E  DG  L   I  R      Y+E  A+   R ++ AL  CH N I+HRD+KPEN 
Sbjct: 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENV 161
Query: 148 IFTTDDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGL 206
           +  + + +A +K  DFG+A    E G V    VGTP +MAPE++    YGK +D+W  G+
Sbjct: 162 LLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGV 221
Query: 207 ILYNLLSGAQPFWAESLYGTLTAIMSREI--DFKSDP--WPTISSSAKDLIRRMLIRDPN 262
           IL+ LLSG  PF     YGT   +    I   +K +P  W  IS SAKDL+RRML+ DP 
Sbjct: 222 ILFILLSGCLPF-----YGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPA 276
Query: 263 NQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVI 313
            +ITV + L HPWL   +  A+   +    + ++++F A  KLK   L  +
Sbjct: 277 ERITVYEALNHPWLKERDRYAYKIHLPET-VEQLRKFNARRKLKGAVLAAV 326

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score =  152 bits (383), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 86/230 (37%), Positives = 126/230 (54%), Gaps = 16/230 (6%)
Query: 86  SKSDEG--YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           S S+EG  YL  +   GG L + I  RE Y+E  A+   + ++ A+  CH  G++HRDLK
Sbjct: 71  SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLK 130
Query: 144 PENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIW 202
           PEN +  +  + A +K  DFGLA   + + + +    GTP Y++PE+L    YGK +DIW
Sbjct: 131 PENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIW 190
Query: 203 SAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN 262
           + G+ILY LL G  PFW E  +     I +   DF S  W T++  AK+LI +ML  +P 
Sbjct: 191 ACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPA 250
Query: 263 NQITVAQILKHPWLNYENGEAWDRPIDTAIISR------VKQFRAMSKLK 306
            +IT  + LKHPW+         R    +++ R      +K+F A  KLK
Sbjct: 251 KRITAHEALKHPWVC-------QRSTVASMMHRQETVECLKKFNARRKLK 293

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score =  152 bits (383), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 148/307 (48%), Gaps = 51/307 (16%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G+   +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDT-AIISRVKQFRAMSK 304
           S+ AKD IRR+L++DP  ++T+   L+HPW+         +P DT   +SR      M K
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI---------KPKDTQQALSRKASAVNMEK 295
Query: 305 LKKLALK 311
            KK A +
Sbjct: 296 FKKFAAR 302

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 130/264 (49%), Gaps = 37/264 (14%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--SKSDEGYLKRE----------- 96
           H+ + EEL  G+   +  C +  TG ++A K I K   S S  G  + E           
Sbjct: 6   HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 97  --------H---------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACH 133
                   H                 GG L D ++++E  TE  A    + +++ +H  H
Sbjct: 66  RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 125
Query: 134 SNGIMHRDLKPENFIFTTDD-ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           S  I H DLKPEN +    +  N  +K  DFG+A   E G  ++ + GTP ++APE++  
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 185
Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
              G E D+WS G+I Y LLSGA PF  E+   TLT I +   DF  + +   S  AKD 
Sbjct: 186 EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDF 245
Query: 253 IRRMLIRDPNNQITVAQILKHPWL 276
           IRR+L++DP  ++T+AQ L+H W+
Sbjct: 246 IRRLLVKDPKRRMTIAQSLEHSWI 269

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 130/254 (51%), Gaps = 34/254 (13%)
Query: 57  LCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKRE--------HCD------ 99
           L +G  G + LC +  TG + A K ISK     K+D+  L RE        H +      
Sbjct: 40  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 100 ----------------GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
                           GG L D I  R+R++E  AA + R V++ +   H N I+HRDLK
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLK 159
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWS 203
           PEN +  +  ++A ++  DFGL+  FE  K  ++ +GT  Y+APE+L    Y ++ D+WS
Sbjct: 160 PENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWS 218
Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
            G+ILY LLSG  PF   + Y  L  +   +  F+   W  +S SAKDLIR+ML   P+ 
Sbjct: 219 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 278
Query: 264 QITVAQILKHPWLN 277
           +I+    L H W+ 
Sbjct: 279 RISARDALDHEWIQ 292

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score =  149 bits (376), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 141/287 (49%), Gaps = 46/287 (16%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G+   +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGE-----AWDRP 287
           S+ AKD IRR+L++DP  ++T+   L+HPW+  ++ +     AW  P
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score =  149 bits (376), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 141/287 (49%), Gaps = 46/287 (16%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G+   +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGE-----AWDRP 287
           S+ AKD IRR+L++DP  ++T+   L+HPW+  ++ +     AW  P
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score =  149 bits (376), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 141/287 (49%), Gaps = 46/287 (16%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G+   +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 183
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGE-----AWDRP 287
           S+ AKD IRR+L++DP  ++T+   L+HPW+  ++ +     AW  P
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 290

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score =  149 bits (376), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 141/287 (49%), Gaps = 46/287 (16%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G+   +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 183
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGE-----AWDRP 287
           S+ AKD IRR+L++DP  ++T+   L+HPW+  ++ +     AW  P
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 290

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score =  149 bits (375), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 141/287 (49%), Gaps = 46/287 (16%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G+   +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 7   ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGE-----AWDRP 287
           S+ AKD IRR+L++DP  ++T+   L+HPW+  ++ +     AW  P
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score =  149 bits (375), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 112/194 (57%), Gaps = 3/194 (1%)
Query: 86  SKSDEG--YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           S S+EG  YL  +   GG L + I  RE Y+E  A+     ++ +++  H + I+HRDLK
Sbjct: 98  SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLK 157
Query: 144 PENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIW 202
           PEN +  +  + A +K  DFGLA   + E + +    GTP Y++PE+L    YGK +DIW
Sbjct: 158 PENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIW 217
Query: 203 SAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN 262
           + G+ILY LL G  PFW E  +     I +   DF S  W T++  AK+LI +ML  +P 
Sbjct: 218 ACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPA 277
Query: 263 NQITVAQILKHPWL 276
            +IT  Q LKHPW+
Sbjct: 278 KRITADQALKHPWV 291

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score =  147 bits (372), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 41/271 (15%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G+   +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFV 184
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S+ AKD IRR+L++DP  ++T+   L+HPW+
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score =  147 bits (372), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 41/271 (15%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G+   +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S+ AKD IRR+L++DP  ++T+   L+HPW+
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score =  147 bits (372), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 140/287 (48%), Gaps = 46/287 (16%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G    +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 7   ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGE-----AWDRP 287
           S+ AKD IRR+L++DP  ++T+   L+HPW+  ++ +     AW  P
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 41/271 (15%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G+   +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S+ AKD IRR+L++DP  ++T+   L+HPW+
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 41/271 (15%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G+   +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S+ AKD IRR+L++DP  ++T+   L+HPW+
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 128/264 (48%), Gaps = 37/264 (14%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS-KSDEGYLKREHCD--------- 99
           H+ + EEL  G+   +  C +  TG ++A K I K    S    + RE  +         
Sbjct: 27  HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 100 --------------------------GGTLVDRISDRERYTERAAASVFRSVVNALHACH 133
                                     GG L D ++++E  TE  A    + +++ +H  H
Sbjct: 87  RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 146
Query: 134 SNGIMHRDLKPENFIFTTDD-ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           S  I H DLKPEN +    +  N  +K  DFG+A   E G  ++ + GTP ++APE++  
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 206
Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
              G E D+WS G+I Y LLSGA PF  E+   TLT I +   DF  + +   S  AKD 
Sbjct: 207 EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDF 266
Query: 253 IRRMLIRDPNNQITVAQILKHPWL 276
           IRR+L++DP  ++ +AQ L+H W+
Sbjct: 267 IRRLLVKDPKRRMXIAQSLEHSWI 290

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 41/271 (15%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G+   +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S+ AKD IRR+L++DP  ++T+   L+HPW+
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 41/271 (15%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G+   +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S+ AKD IRR+L++DP  ++T+   L+HPW+
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 41/271 (15%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKREHCD---- 99
           E++  ++   EEL  G+   +  C E STGLQ+A K I K  +KS    + RE  +    
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 100 -------------------------------GGTLVDRISDRERYTERAAASVFRSVVNA 128
                                          GG L D ++++E  TE  A    + ++N 
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENAT---LKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++  HS  I H DLKPEN +    D N     +K  DFGLA   + G  ++ + GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           APE++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S+ AKD IRR+L++DP  ++T+   L+HPW+
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score =  146 bits (369), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 109/185 (58%), Gaps = 7/185 (3%)
Query: 99  DGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           +GG L  RI +R  + +TER AA + R +  A+   HS+ I HRD+KPEN ++T+ +++A
Sbjct: 90  EGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDA 149
Query: 157 TLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQ 216
            LK TDFG A    +  + +    TP Y+APE+LGP KY K  D+WS G+I+Y LL G  
Sbjct: 150 VLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFP 208
Query: 217 PFWAESLYGTLTAIMSR----EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
           PF++ +       +  R    +  F +  W  +S  AK LIR +L  DP  ++T+ Q + 
Sbjct: 209 PFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 268
Query: 273 HPWLN 277
           HPW+N
Sbjct: 269 HPWIN 273

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score =  146 bits (368), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 109/185 (58%), Gaps = 7/185 (3%)
Query: 99  DGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           +GG L  RI +R  + +TER AA + R +  A+   HS+ I HRD+KPEN ++T+ +++A
Sbjct: 109 EGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDA 168
Query: 157 TLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQ 216
            LK TDFG A    +  + +    TP Y+APE+LGP KY K  D+WS G+I+Y LL G  
Sbjct: 169 VLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFP 227
Query: 217 PFWAESLYGTLTAIMSR----EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
           PF++ +       +  R    +  F +  W  +S  AK LIR +L  DP  ++T+ Q + 
Sbjct: 228 PFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287
Query: 273 HPWLN 277
           HPW+N
Sbjct: 288 HPWIN 292

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score =  145 bits (365), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 105/187 (56%), Gaps = 6/187 (3%)
Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+  
Sbjct: 93  ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 152
Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            NA LK TDFG A          E   TP Y+APE+LGP KY K  D+WS G+I+Y LL 
Sbjct: 153 PNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 212
Query: 214 GAQPFWAESLY----GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           G  PF++        G  T I   + +F +  W  +S   K LIR +L  +P  ++T+ +
Sbjct: 213 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 272
Query: 270 ILKHPWL 276
            + HPW+
Sbjct: 273 FMNHPWI 279

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score =  144 bits (364), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/266 (35%), Positives = 133/266 (50%), Gaps = 27/266 (10%)
Query: 92  YLKREHCDGGTLVDRISDRER----YTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           Y+  E  DG  L   I  R      Y+E  A+   R ++ AL  CH N I+HRD+KP   
Sbjct: 104 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCV 163
Query: 148 IFTTDDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGL 206
           +  + + +A +K   FG+A    E G V    VGTP +MAPE++    YGK +D+W  G+
Sbjct: 164 LLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGV 223
Query: 207 ILYNLLSGAQPFWAESLYGTLTAIMSREI--DFKSDP--WPTISSSAKDLIRRMLIRDPN 262
           IL+ LLSG  PF     YGT   +    I   +K +P  W  IS SAKDL+RRML+ DP 
Sbjct: 224 ILFILLSGCLPF-----YGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPA 278
Query: 263 NQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENL----- 317
            +ITV + L HPWL   +  A+   +    + ++++F A  KLK   L  +  +      
Sbjct: 279 ERITVYEALNHPWLKERDRYAYKIHLPET-VEQLRKFNARRKLKGAVLAAVSSHKFNSFY 337
Query: 318 --PAEEIQKHKETFKQMDTNDSGTLT 341
             P EE+    E     D   SG L 
Sbjct: 338 GDPPEELPDFSE-----DPTSSGLLA 358

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score =  144 bits (364), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA 160
           G L D ++++   +E+   S+ RS++ A+   H+N I+HRDLKPEN +    D+N  ++ 
Sbjct: 185 GELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQIRL 241
Query: 161 TDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK-------YGKEIDIWSAGLILYNLLS 213
           +DFG +   E G+   E+ GTP Y+APE+L  C        YGKE+D+W+ G+IL+ LL+
Sbjct: 242 SDFGFSCHLEPGEKLRELCGTPGYLAPEILK-CSMDETHPGYGKEVDLWACGVILFTLLA 300
Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
           G+ PFW       L  IM  +  F S  W   SS+ KDLI R+L  DP  ++T  Q L+H
Sbjct: 301 GSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360
Query: 274 PWL 276
           P+ 
Sbjct: 361 PFF 363

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score =  144 bits (363), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/231 (37%), Positives = 123/231 (53%), Gaps = 15/231 (6%)
Query: 92  YLKREHCDGGTLVDRISDRER----YTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           Y+  E  DG  L   I  R      Y+E  A+   R ++ AL  CH N I+HRD+KP   
Sbjct: 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCV 161
Query: 148 IFTTDDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGL 206
           +  + + +A +K   FG+A    E G V    VGTP +MAPE++    YGK +D+W  G+
Sbjct: 162 LLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGV 221
Query: 207 ILYNLLSGAQPFWAESLYGTLTAIMSREI--DFKSDP--WPTISSSAKDLIRRMLIRDPN 262
           IL+ LLSG  PF     YGT   +    I   +K +P  W  IS SAKDL+RRML+ DP 
Sbjct: 222 ILFILLSGCLPF-----YGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPA 276
Query: 263 NQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVI 313
            +ITV + L HPWL   +  A+   +    + ++++F A  KLK   L  +
Sbjct: 277 ERITVYEALNHPWLKERDRYAYKIHLPET-VEQLRKFNARRKLKGAVLAAV 326

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+  
Sbjct: 139 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 198
Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            NA LK TDFG A              TP Y+APE+LGP KY K  D+WS G+I+Y LL 
Sbjct: 199 PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 258
Query: 214 GAQPFWAESLY----GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           G  PF++        G  T I   + +F +  W  +S   K LIR +L  +P  ++T+ +
Sbjct: 259 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 318
Query: 270 ILKHPWL 276
            + HPW+
Sbjct: 319 FMNHPWI 325

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+  
Sbjct: 145 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 204
Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            NA LK TDFG A              TP Y+APE+LGP KY K  D+WS G+I+Y LL 
Sbjct: 205 PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 264
Query: 214 GAQPFWAESLY----GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           G  PF++        G  T I   + +F +  W  +S   K LIR +L  +P  ++T+ +
Sbjct: 265 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 324
Query: 270 ILKHPWL 276
            + HPW+
Sbjct: 325 FMNHPWI 331

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+  
Sbjct: 95  ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 154
Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            NA LK TDFG A              TP Y+APE+LGP KY K  D+WS G+I+Y LL 
Sbjct: 155 PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 214
Query: 214 GAQPFWAESLY----GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           G  PF++        G  T I   + +F +  W  +S   K LIR +L  +P  ++T+ +
Sbjct: 215 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 274
Query: 270 ILKHPWL 276
            + HPW+
Sbjct: 275 FMNHPWI 281

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+  
Sbjct: 95  ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 154
Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            NA LK TDFG A              TP Y+APE+LGP KY K  D+WS G+I+Y LL 
Sbjct: 155 PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 214
Query: 214 GAQPFWAESLY----GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           G  PF++        G  T I   + +F +  W  +S   K LIR +L  +P  ++T+ +
Sbjct: 215 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 274
Query: 270 ILKHPWL 276
            + HPW+
Sbjct: 275 FMNHPWI 281

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+  
Sbjct: 93  ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 152
Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            NA LK TDFG A              TP Y+APE+LGP KY K  D+WS G+I+Y LL 
Sbjct: 153 PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 212
Query: 214 GAQPFWAESLY----GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           G  PF++        G  T I   + +F +  W  +S   K LIR +L  +P  ++T+ +
Sbjct: 213 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 272
Query: 270 ILKHPWL 276
            + HPW+
Sbjct: 273 FMNHPWI 279

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+  
Sbjct: 94  ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 153
Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            NA LK TDFG A              TP Y+APE+LGP KY K  D+WS G+I+Y LL 
Sbjct: 154 PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 213
Query: 214 GAQPFWAESLY----GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           G  PF++        G  T I   + +F +  W  +S   K LIR +L  +P  ++T+ +
Sbjct: 214 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 273
Query: 270 ILKHPWL 276
            + HPW+
Sbjct: 274 FMNHPWI 280

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+  
Sbjct: 109 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 168
Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            NA LK TDFG A              TP Y+APE+LGP KY K  D+WS G+I+Y LL 
Sbjct: 169 PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 228
Query: 214 GAQPFWAESLY----GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           G  PF++        G  T I   + +F +  W  +S   K LIR +L  +P  ++T+ +
Sbjct: 229 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 288
Query: 270 ILKHPWL 276
            + HPW+
Sbjct: 289 FMNHPWI 295

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+  
Sbjct: 100 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 159
Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            NA LK TDFG A              TP Y+APE+LGP KY K  D+WS G+I+Y LL 
Sbjct: 160 PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 219
Query: 214 GAQPFWAESLY----GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           G  PF++        G  T I   + +F +  W  +S   K LIR +L  +P  ++T+ +
Sbjct: 220 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 279
Query: 270 ILKHPWL 276
            + HPW+
Sbjct: 280 FMNHPWI 286

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+  
Sbjct: 99  ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 158
Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            NA LK TDFG A              TP Y+APE+LGP KY K  D+WS G+I+Y LL 
Sbjct: 159 PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 218
Query: 214 GAQPFWAESLY----GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           G  PF++        G  T I   + +F +  W  +S   K LIR +L  +P  ++T+ +
Sbjct: 219 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 278
Query: 270 ILKHPWL 276
            + HPW+
Sbjct: 279 FMNHPWI 285

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+  
Sbjct: 101 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 160
Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            NA LK TDFG A              TP Y+APE+LGP KY K  D+WS G+I+Y LL 
Sbjct: 161 PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 220
Query: 214 GAQPFWAESLY----GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           G  PF++        G  T I   + +F +  W  +S   K LIR +L  +P  ++T+ +
Sbjct: 221 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 280
Query: 270 ILKHPWL 276
            + HPW+
Sbjct: 281 FMNHPWI 287

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score =  142 bits (357), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 137/276 (49%), Gaps = 42/276 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISK-TSKSDEGYLKREHCD---------- 99
           + I EEL  G+   +  C E STGL++A K I K  S++    + RE  +          
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 100 -------------------------GGTLVDRISDRERYTERAAASVFRSVVNALHACHS 134
                                    GG L D ++ +E  +E  A S  + +++ ++  H+
Sbjct: 74  HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 135 NGIMHRDLKPENFIFTTDDENATL---KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLG 191
             I H DLKPEN +    D+N  +   K  DFGLA   E+G  ++ + GTP ++APE++ 
Sbjct: 134 KKIAHFDLKPENIMLL--DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD 251
               G E D+WS G+I Y LLSGA PF  ++   TL  I S   DF  + +   S  AKD
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 252 LIRRMLIRDPNNQITVAQILKHPWLN-YENGEAWDR 286
            IR++L+++   ++T+ + L+HPW+   +N +A  R
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR 287

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  142 bits (357), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 137/276 (49%), Gaps = 42/276 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISK-TSKSDEGYLKREHCD---------- 99
           + I EEL  G+   +  C E STGL++A K I K  S++    + RE  +          
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 100 -------------------------GGTLVDRISDRERYTERAAASVFRSVVNALHACHS 134
                                    GG L D ++ +E  +E  A S  + +++ ++  H+
Sbjct: 74  HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 135 NGIMHRDLKPENFIFTTDDENATL---KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLG 191
             I H DLKPEN +    D+N  +   K  DFGLA   E+G  ++ + GTP ++APE++ 
Sbjct: 134 KKIAHFDLKPENIMLL--DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD 251
               G E D+WS G+I Y LLSGA PF  ++   TL  I S   DF  + +   S  AKD
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 252 LIRRMLIRDPNNQITVAQILKHPWLN-YENGEAWDR 286
            IR++L+++   ++T+ + L+HPW+   +N +A  R
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR 287

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score =  141 bits (355), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 137/276 (49%), Gaps = 42/276 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISK-TSKSDEGYLKREHCD---------- 99
           + I EEL  G+   +  C E STGL++A K I K  S++    + RE  +          
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 100 -------------------------GGTLVDRISDRERYTERAAASVFRSVVNALHACHS 134
                                    GG L D ++ +E  +E  A S  + +++ ++  H+
Sbjct: 74  HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 135 NGIMHRDLKPENFIFTTDDENATL---KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLG 191
             I H DLKPEN +    D+N  +   K  DFGLA   E+G  ++ + GTP ++APE++ 
Sbjct: 134 KKIAHFDLKPENIMLL--DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD 251
               G E D+WS G+I Y LLSGA PF  ++   TL  I S   DF  + +   S  AKD
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 252 LIRRMLIRDPNNQITVAQILKHPWLN-YENGEAWDR 286
            IR++L+++   ++T+ + L+HPW+   +N +A  R
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR 287

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  141 bits (355), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 137/276 (49%), Gaps = 42/276 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISK-TSKSDEGYLKREHCD---------- 99
           + I EEL  G+   +  C E STGL++A K I K  S++    + RE  +          
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 100 -------------------------GGTLVDRISDRERYTERAAASVFRSVVNALHACHS 134
                                    GG L D ++ +E  +E  A S  + +++ ++  H+
Sbjct: 74  HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 135 NGIMHRDLKPENFIFTTDDENATL---KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLG 191
             I H DLKPEN +    D+N  +   K  DFGLA   E+G  ++ + GTP ++APE++ 
Sbjct: 134 KKIAHFDLKPENIMLL--DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD 251
               G E D+WS G+I Y LLSGA PF  ++   TL  I +   DF  + +   S  AKD
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 252 LIRRMLIRDPNNQITVAQILKHPWLN-YENGEAWDR 286
            IR++L+++   ++T+ + L+HPW+   +N +A  R
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR 287

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score =  140 bits (354), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 126/256 (49%), Gaps = 34/256 (13%)
Query: 54  AEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEG------------------- 91
            ++L  G  G + LC +  TG + A K I K   T+ S+ G                   
Sbjct: 26  VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 92  -----------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHR 140
                      YL  E   GG L D I  R++++E  AA + + V++     H + I+HR
Sbjct: 86  LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 145
Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEID 200
           DLKPEN +  +   +A +K  DFGL+  FE G   +E +GT  Y+APE+L   KY ++ D
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK-KYDEKCD 204
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +WS G+ILY LL G  PF  ++    L  +   +  F    W  +S  AK L++ ML  +
Sbjct: 205 VWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYE 264
Query: 261 PNNQITVAQILKHPWL 276
           P+ +I+  + L HPW+
Sbjct: 265 PSKRISAEEALNHPWI 280

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 137/276 (49%), Gaps = 42/276 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISK-TSKSDEGYLKREHCD---------- 99
           + I EEL  G+   +  C E STGL++A K I K  S++    + RE  +          
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 100 -------------------------GGTLVDRISDRERYTERAAASVFRSVVNALHACHS 134
                                    GG L D ++ +E  +E  A S  + +++ ++  H+
Sbjct: 74  HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 135 NGIMHRDLKPENFIFTTDDENATL---KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLG 191
             I H DLKPEN +    D+N  +   K  DFGLA   E+G  ++ + GTP ++APE++ 
Sbjct: 134 KKIAHFDLKPENIMLL--DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD 251
               G E D+WS G+I Y LLSGA PF  ++   TL  I +   DF  + +   S  AKD
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 252 LIRRMLIRDPNNQITVAQILKHPWLN-YENGEAWDR 286
            IR++L+++   ++T+ + L+HPW+   +N +A  R
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR 287

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score =  139 bits (351), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 140/286 (48%), Gaps = 52/286 (18%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISK-TSKSDEGYLKREHCD---------- 99
           + I EEL  G+   +  C E STGL++A K I K  S++    + RE  +          
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 100 -------------------------GGTLVDRISDRERYTERAAASVFRSVVNALHACHS 134
                                    GG L D ++ +E  +E  A S  + +++ ++  H+
Sbjct: 74  HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 135 NGIMHRDLKPENFIFTTDDENATL---KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLG 191
             I H DLKPEN +    D+N  +   K  DFGLA   E+G  ++ + GTP ++APE++ 
Sbjct: 134 KKIAHFDLKPENIMLL--DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD 251
               G E D+WS G+I Y LLSGA PF  ++   TL  I +   DF  + +   S  AKD
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 252 LIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDT--AIISR 295
            IR++L+++   ++T+ + L+HPW+          P+DT  A++ R
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWIT---------PVDTQQAMVRR 288

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score =  139 bits (350), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 100/187 (53%), Gaps = 6/187 (3%)
Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+  
Sbjct: 139 ECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 198
Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            NA LK TDFG A              TP Y+APE+LGP KY K  D WS G+I Y LL 
Sbjct: 199 PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLC 258
Query: 214 GAQPFWAESLY----GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           G  PF++        G  T I   + +F +  W  +S   K LIR +L  +P  + T+ +
Sbjct: 259 GYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITE 318
Query: 270 ILKHPWL 276
              HPW+
Sbjct: 319 FXNHPWI 325

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +++ Y+  E  +GG L D++   +R  E      F  ++ A+   H NGI+HRDLKPEN 
Sbjct: 86  AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 145
Query: 148 IFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSA 204
           + ++ +E+  +K TDFG +    E  +   + GTP Y+APE+L   G   Y + +D WS 
Sbjct: 146 LLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205
Query: 205 GLILYNLLSGAQPFWAESLYGTLT-AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
           G+IL+  LSG  PF       +L   I S + +F  + W  +S  A DL++++L+ DP  
Sbjct: 206 GVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKA 265
Query: 264 QITVAQILKHPWLNYEN 280
           + T  + L+HPWL  E+
Sbjct: 266 RFTTEEALRHPWLQDED 282

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +++ Y+  E  +GG L D++   +R  E      F  ++ A+   H NGI+HRDLKPEN 
Sbjct: 86  AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 145
Query: 148 IFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSA 204
           + ++ +E+  +K TDFG +    E  +   + GTP Y+APE+L   G   Y + +D WS 
Sbjct: 146 LLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205
Query: 205 GLILYNLLSGAQPFWAESLYGTLT-AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
           G+IL+  LSG  PF       +L   I S + +F  + W  +S  A DL++++L+ DP  
Sbjct: 206 GVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKA 265
Query: 264 QITVAQILKHPWLNYEN 280
           + T  + L+HPWL  E+
Sbjct: 266 RFTTEEALRHPWLQDED 282

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +++ Y+  E  +GG L D++   +R  E      F  ++ A+   H NGI+HRDLKPEN 
Sbjct: 85  AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 144
Query: 148 IFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSA 204
           + ++ +E+  +K TDFG +    E  +   + GTP Y+APE+L   G   Y + +D WS 
Sbjct: 145 LLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 204
Query: 205 GLILYNLLSGAQPFWAESLYGTLT-AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
           G+IL+  LSG  PF       +L   I S + +F  + W  +S  A DL++++L+ DP  
Sbjct: 205 GVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKA 264
Query: 264 QITVAQILKHPWLNYEN 280
           + T  + L+HPWL  E+
Sbjct: 265 RFTTEEALRHPWLQDED 281

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +++ Y+  E  +GG L D++   +R  E      F  ++ A+   H NGI+HRDLKPEN 
Sbjct: 86  AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 145
Query: 148 IFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSA 204
           + ++ +E+  +K TDFG +    E  +   + GTP Y+APE+L   G   Y + +D WS 
Sbjct: 146 LLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205
Query: 205 GLILYNLLSGAQPFWAESLYGTLT-AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
           G+IL+  LSG  PF       +L   I S + +F  + W  +S  A DL++++L+ DP  
Sbjct: 206 GVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKA 265
Query: 264 QITVAQILKHPWLNYEN 280
           + T  + L+HPWL  E+
Sbjct: 266 RFTTEEALRHPWLQDED 282

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +++ Y+  E  +GG L D++   +R  E      F  ++ A+   H NGI+HRDLKPEN 
Sbjct: 92  AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 151
Query: 148 IFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSA 204
           + ++ +E+  +K TDFG +    E  +   + GTP Y+APE+L   G   Y + +D WS 
Sbjct: 152 LLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 211
Query: 205 GLILYNLLSGAQPFWAESLYGTLT-AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
           G+IL+  LSG  PF       +L   I S + +F  + W  +S  A DL++++L+ DP  
Sbjct: 212 GVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKA 271
Query: 264 QITVAQILKHPWLNYEN 280
           + T  + L+HPWL  E+
Sbjct: 272 RFTTEEALRHPWLQDED 288

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +++ Y+  E  +GG L D++   +R  E      F  ++ A+   H NGI+HRDLKPEN 
Sbjct: 225 AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 284
Query: 148 IFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSA 204
           + ++ +E+  +K TDFG +    E  +   + GTP Y+APE+L   G   Y + +D WS 
Sbjct: 285 LLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 344
Query: 205 GLILYNLLSGAQPFWAESLYGTLT-AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
           G+IL+  LSG  PF       +L   I S + +F  + W  +S  A DL++++L+ DP  
Sbjct: 345 GVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKA 404
Query: 264 QITVAQILKHPWLNYEN 280
           + T  + L+HPWL  E+
Sbjct: 405 RFTTEEALRHPWLQDED 421

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 155/329 (47%), Gaps = 61/329 (18%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--SKSDE--------GYLK---REH 97
           + I E L  G  G++ L T   T  + A K IS+    KSD          YLK     H
Sbjct: 11  YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 98  C-------------------DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIM 138
                                GG L D I +++R TE      F+ ++ A+  CH + I+
Sbjct: 71  IIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIV 130
Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL-GPCKYGK 197
           HRDLKPEN +    D+N  +K  DFGL+    +G   +   G+P Y APE++ G    G 
Sbjct: 131 HRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 198 EIDIWSAGLILYNLLSGAQPF---WAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR 254
           E+D+WS G++LY +L G  PF   +  +L+  + + +    DF       +S  A+ LIR
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQSLIR 240
Query: 255 RMLIRDPNNQITVAQILKHPWLNYENGEAWDRPI--------DTAIISRVKQFRAMSKLK 306
           RM++ DP  +IT+ +I + PW N  N   + RP+        D+ I+S++ +    S+  
Sbjct: 241 RMIVADPMQRITIQEIRRDPWFNV-NLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSE-- 297
Query: 307 KLALKVIVENLPAEEIQKHKETFKQMDTN 335
                 IVE L ++E  + KE +  +  N
Sbjct: 298 ----DYIVEALRSDENNEVKEAYNLLHEN 322

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 130/279 (46%), Gaps = 32/279 (11%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE------------- 96
           H+ I EEL  G  G ++  TE +TG  FA K +    +SD+  +++E             
Sbjct: 52  HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 111
Query: 97  -----------------HCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIM 138
                               GG L ++++D   + +E  A    R V   L   H N  +
Sbjct: 112 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 171
Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           H DLKPEN +FTT   N  LK  DFGL    +  +  +   GT  + APE+      G  
Sbjct: 172 HLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 230
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
            D+WS G++ Y LLSG  PF  E+   TL  + S + +     +  IS   KD IR++L+
Sbjct: 231 TDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLL 290
Query: 259 RDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVK 297
            DPN ++T+ Q L+HPWL   N    D  I ++  ++++
Sbjct: 291 ADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIR 329

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +++ Y+  E  +GG L D++   +R  E      F  ++ A+   H NGI+HRDLKPEN 
Sbjct: 211 AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 270
Query: 148 IFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSA 204
           + ++ +E+  +K TDFG +    E  +   + GTP Y+APE+L   G   Y + +D WS 
Sbjct: 271 LLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 330
Query: 205 GLILYNLLSGAQPFWAESLYGTLT-AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
           G+IL+  LSG  PF       +L   I S + +F  + W  +S  A DL++++L+ DP  
Sbjct: 331 GVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKA 390
Query: 264 QITVAQILKHPWLNYEN 280
           + T  + L+HPWL  E+
Sbjct: 391 RFTTEEALRHPWLQDED 407

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score =  135 bits (340), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 130/279 (46%), Gaps = 32/279 (11%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE------------- 96
           H+ I EEL  G  G ++  TE +TG  FA K +    +SD+  +++E             
Sbjct: 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 217
Query: 97  -----------------HCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIM 138
                               GG L ++++D   + +E  A    R V   L   H N  +
Sbjct: 218 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 277
Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           H DLKPEN +FTT   N  LK  DFGL    +  +  +   GT  + APE+      G  
Sbjct: 278 HLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 336
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
            D+WS G++ Y LLSG  PF  E+   TL  + S + +     +  IS   KD IR++L+
Sbjct: 337 TDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLL 396
Query: 259 RDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVK 297
            DPN ++T+ Q L+HPWL   N    D  I ++  ++++
Sbjct: 397 ADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIR 435

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 11/184 (5%)
Query: 101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA 160
           G L D ++++   +E+    + R+++  + A H   I+HRDLKPEN +    D++  +K 
Sbjct: 96  GELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKL 152
Query: 161 TDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK-------YGKEIDIWSAGLILYNLLS 213
           TDFG +   + G+   EV GTP Y+APE++  C        YGKE+D+WS G+I+Y LL+
Sbjct: 153 TDFGFSCQLDPGEKLREVCGTPSYLAPEII-ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
           G+ PFW       L  IMS    F S  W   S + KDL+ R L+  P  + T  + L H
Sbjct: 212 GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 271
Query: 274 PWLN 277
           P+  
Sbjct: 272 PFFQ 275

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 11/184 (5%)
Query: 101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA 160
           G L D ++++   +E+    + R+++  + A H   I+HRDLKPEN +    D++  +K 
Sbjct: 109 GELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKL 165
Query: 161 TDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK-------YGKEIDIWSAGLILYNLLS 213
           TDFG +   + G+   EV GTP Y+APE++  C        YGKE+D+WS G+I+Y LL+
Sbjct: 166 TDFGFSCQLDPGEKLREVCGTPSYLAPEII-ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
           G+ PFW       L  IMS    F S  W   S + KDL+ R L+  P  + T  + L H
Sbjct: 225 GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284
Query: 274 PWLN 277
           P+  
Sbjct: 285 PFFQ 288

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score =  132 bits (332), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 100/184 (54%), Gaps = 11/184 (5%)
Query: 101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA 160
           G L D ++++   +E+    + R+++  + A H   I+HRDLKPEN +    D++  +K 
Sbjct: 109 GELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKL 165
Query: 161 TDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK-------YGKEIDIWSAGLILYNLLS 213
           TDFG +   + G+    V GTP Y+APE++  C        YGKE+D+WS G+I+Y LL+
Sbjct: 166 TDFGFSCQLDPGEKLRSVCGTPSYLAPEII-ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
           G+ PFW       L  IMS    F S  W   S + KDL+ R L+  P  + T  + L H
Sbjct: 225 GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284
Query: 274 PWLN 277
           P+  
Sbjct: 285 PFFQ 288

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 130/261 (49%), Gaps = 38/261 (14%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------- 88
           + + E +  G       C   +T +++A K I K+ +                       
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 89  --DEG---YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
             D+G   YL  E   GG L+D+I  ++ ++ER A+ V  ++   +   HS G++HRDLK
Sbjct: 89  VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLK 148
Query: 144 PENFIFTTDDENA-TLKATDFGLAFFFEEGKVYEEVVGTPLY----MAPELLGPCKYGKE 198
           P N ++  +  N   L+  DFG   F ++ +    ++ TP Y    +APE+L    Y + 
Sbjct: 149 PSNILYVDESGNPECLRICDFG---FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEG 205
Query: 199 IDIWSAGLILYNLLSGAQPFW---AESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR 255
            DIWS G++LY +L+G  PF    +++    LT I S +       W T+S +AKDL+ +
Sbjct: 206 CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSK 265
Query: 256 MLIRDPNNQITVAQILKHPWL 276
           ML  DP+ ++T  Q+L+HPW+
Sbjct: 266 MLHVDPHQRLTAKQVLQHPWV 286

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 132/265 (49%), Gaps = 38/265 (14%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------- 88
           + + E +  G       C   +T +++A K I K+ +                       
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 89  --DEG---YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
             D+G   YL  E   GG L+D+I  ++ ++ER A+ V  ++   +   HS G++HRDLK
Sbjct: 89  VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLK 148
Query: 144 PENFIFTTDDENA-TLKATDFGLAFFFEEGKVYEEVVGTPLY----MAPELLGPCKYGKE 198
           P N ++  +  N   L+  DFG   F ++ +    ++ TP Y    +APE+L    Y + 
Sbjct: 149 PSNILYVDESGNPECLRICDFG---FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEG 205
Query: 199 IDIWSAGLILYNLLSGAQPFW---AESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR 255
            DIWS G++LY +L+G  PF    +++    LT I S +       W T+S +AKDL+ +
Sbjct: 206 CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSK 265
Query: 256 MLIRDPNNQITVAQILKHPWLNYEN 280
           ML  DP+ ++T  Q+L+HPW+  ++
Sbjct: 266 MLHVDPHQRLTAKQVLQHPWVTQKD 290

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 109/193 (56%), Gaps = 8/193 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           +L  E  +GG L +RI  ++ ++E  A+ + R +V+A+   H  G++HRDLKPEN +FT 
Sbjct: 82  FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTD 141
Query: 152 DDENATLKATDFGLAFF-FEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
           +++N  +K  DFG A     + +  +    T  Y APELL    Y +  D+WS G+ILY 
Sbjct: 142 ENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYT 201
Query: 211 LLSGAQPFWAESLYGTLTA---IMSR----EIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
           +LSG  PF +     T T+   IM +    +  F+ + W  +S  AKDLI+ +L  DPN 
Sbjct: 202 MLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNK 261
Query: 264 QITVAQILKHPWL 276
           ++ ++ +  + WL
Sbjct: 262 RLKMSGLRYNEWL 274

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score =  125 bits (314), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 37/261 (14%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------- 88
           F    +L  G  G ++L  E S+GL+   K+I+K                          
Sbjct: 24  FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 89  ---------DEGYLKREHCDGGTLVDRI-SDRER---YTERAAASVFRSVVNALHACHSN 135
                       Y+  E C+GG L++RI S + R    +E   A + + ++NAL   HS 
Sbjct: 84  KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY 195
            ++H+DLKPEN +F     ++ +K  DFGLA  F+  +      GT LYMAPE+      
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVT 203
Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR 255
            K  DIWSAG+++Y LL+G  PF   SL         +E ++  +  P ++  A DL+++
Sbjct: 204 FK-CDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLLKQ 261
Query: 256 MLIRDPNNQITVAQILKHPWL 276
           ML +DP  + + AQ+L H W 
Sbjct: 262 MLTKDPERRPSAAQVLHHEWF 282

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 42/272 (15%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--SKSD-EGYLKRE---------- 96
           ++ I + L  G  G++ L    +TG + A K I+K   +KSD +G ++RE          
Sbjct: 9   NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 97  -------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                                 G  L D I  R++ +E+ A   F+ +++A+  CH + I
Sbjct: 69  HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL-GPCKYG 196
           +HRDLKPEN +    DE+  +K  DFGL+    +G   +   G+P Y APE++ G    G
Sbjct: 129 VHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 185
Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRR 255
            E+D+WS G+ILY +L    PF  ES+      ++ + I       P  +S  A  LI+R
Sbjct: 186 PEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFKNISNGVYTLPKFLSPGAAGLIKR 240
Query: 256 MLIRDPNNQITVAQILKHPWLNYENGEAWDRP 287
           MLI +P N+I++ +I++  W   +  E    P
Sbjct: 241 MLIVNPLNRISIHEIMQDDWFKVDLPEYLLPP 272

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 130/261 (49%), Gaps = 42/261 (16%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--SKSD-EGYLKRE---------- 96
           ++ I + L  G  G++ L    +TG + A K I+K   +KSD +G ++RE          
Sbjct: 14  NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 97  -------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                                 G  L D I  R++ +E+ A   F+ +++A+  CH + I
Sbjct: 74  HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL-GPCKYG 196
           +HRDLKPEN +    DE+  +K  DFGL+    +G   +   G+P Y APE++ G    G
Sbjct: 134 VHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 190
Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRR 255
            E+D+WS G+ILY +L    PF  ES+      ++ + I       P  +S  A  LI+R
Sbjct: 191 PEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFKNISNGVYTLPKFLSPGAAGLIKR 245
Query: 256 MLIRDPNNQITVAQILKHPWL 276
           MLI +P N+I++ +I++  W 
Sbjct: 246 MLIVNPLNRISIHEIMQDDWF 266

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 42/272 (15%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--SKSD-EGYLKRE---------- 96
           ++ I + L  G  G++ L    +TG + A K I+K   +KSD +G ++RE          
Sbjct: 5   NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 97  -------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                                 G  L D I  R++ +E+ A   F+ +++A+  CH + I
Sbjct: 65  HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL-GPCKYG 196
           +HRDLKPEN +    DE+  +K  DFGL+    +G   +   G+P Y APE++ G    G
Sbjct: 125 VHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 181
Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRR 255
            E+D+WS G+ILY +L    PF  ES+      ++ + I       P  +S  A  LI+R
Sbjct: 182 PEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFKNISNGVYTLPKFLSPGAAGLIKR 236
Query: 256 MLIRDPNNQITVAQILKHPWLNYENGEAWDRP 287
           MLI +P N+I++ +I++  W   +  E    P
Sbjct: 237 MLIVNPLNRISIHEIMQDDWFKVDLPEYLLPP 268

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 130/261 (49%), Gaps = 42/261 (16%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--SKSD-EGYLKRE---------- 96
           ++ I + L  G  G++ L    +TG + A K I+K   +KSD +G ++RE          
Sbjct: 15  NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 97  -------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                                 G  L D I  R++ +E+ A   F+ +++A+  CH + I
Sbjct: 75  HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL-GPCKYG 196
           +HRDLKPEN +    DE+  +K  DFGL+    +G   +   G+P Y APE++ G    G
Sbjct: 135 VHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 191
Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRR 255
            E+D+WS G+ILY +L    PF  ES+      ++ + I       P  +S  A  LI+R
Sbjct: 192 PEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFKNISNGVYTLPKFLSPGAAGLIKR 246
Query: 256 MLIRDPNNQITVAQILKHPWL 276
           MLI +P N+I++ +I++  W 
Sbjct: 247 MLIVNPLNRISIHEIMQDDWF 267

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 8/187 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG + D +    R  E+ A + FR +V+A+  CH   I+HRDLK EN +   
Sbjct: 89  YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL-- 146
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYN 210
            D +  +K  DFG +  F  G   +E  G+P Y APEL    KY G E+D+WS G+ILY 
Sbjct: 147 -DADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           L+SG+ PF  ++    L  +  R +  K      +S+  ++L+++ LI +P+ + T+ QI
Sbjct: 206 LVSGSLPFDGQN----LKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
Query: 271 LKHPWLN 277
           +K  W+N
Sbjct: 262 MKDRWMN 268

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 135/272 (49%), Gaps = 45/272 (16%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------- 88
           + + E++  G       C   +T ++FA K I K+ +                       
Sbjct: 24  YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKD 83
Query: 89  --DEG---YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
             D+G   Y+  E   GG L+D+I  ++ ++ER A++V  ++   +   H+ G++HRDLK
Sbjct: 84  VYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLK 143
Query: 144 PENFIFTTDDENA-TLKATDFGLAFFFEEGKVYEEVVGTPLY----MAPELLGPCKYGKE 198
           P N ++  +  N  +++  DFG   F ++ +    ++ TP Y    +APE+L    Y   
Sbjct: 144 PSNILYVDESGNPESIRICDFG---FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAA 200
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR----EIDFKSDPWPTISSSAKDLIR 254
            DIWS G++LY +L+G  PF A     T   I++R    +       W ++S +AKDL+ 
Sbjct: 201 CDIWSLGVLLYTMLTGYTPF-ANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVS 259
Query: 255 RMLIRDPNNQITVAQILKHPWLNYENGEAWDR 286
           +ML  DP+ ++T A +L+HPW+ +     WD+
Sbjct: 260 KMLHVDPHQRLTAALVLRHPWIVH-----WDQ 286

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score =  122 bits (305), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 8/197 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG + D +    R  E+ A S FR +V+A+  CH   I+HRDLK EN +   
Sbjct: 87  YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL-- 144
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYN 210
            D +  +K  DFG +  F  G   +   G+P Y APEL    KY G E+D+WS G+ILY 
Sbjct: 145 -DADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 203
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           L+SG+ PF  ++    L  +  R +  K      +S+  ++L++R L+ +P  + T+ QI
Sbjct: 204 LVSGSLPFDGQN----LKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQI 259
Query: 271 LKHPWLNYENGEAWDRP 287
           +K  W+N  + E   +P
Sbjct: 260 MKDRWINAGHEEDELKP 276

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score =  121 bits (304), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 106/197 (53%), Gaps = 8/197 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG + D +    R  E+ A S FR +V+A+  CH   I+HRDLK EN +   
Sbjct: 90  YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL-- 147
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYN 210
            D +  +K  DFG +  F  G   +   G P Y APEL    KY G E+D+WS G+ILY 
Sbjct: 148 -DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 206
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           L+SG+ PF  ++    L  +  R +  K      +S+  ++L++R L+ +P  + T+ QI
Sbjct: 207 LVSGSLPFDGQN----LKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQI 262
Query: 271 LKHPWLNYENGEAWDRP 287
           +K  W+N  + E   +P
Sbjct: 263 MKDRWINAGHEEDELKP 279

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG + D +    R  E+ A + FR +V+A+  CH   I+HRDLK EN +   
Sbjct: 89  YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL-- 146
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYN 210
            D +  +K  DFG +  F  G   +   G+P Y APEL    KY G E+D+WS G+ILY 
Sbjct: 147 -DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           L+SG+ PF  ++    L  +  R +  K      +S+  ++L+++ LI +P+ + T+ QI
Sbjct: 206 LVSGSLPFDGQN----LKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
Query: 271 LKHPWLN 277
           +K  W+N
Sbjct: 262 MKDRWMN 268

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG + D +    R  E+ A + FR +V+A+  CH   I+HRDLK EN +   
Sbjct: 89  YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL-- 146
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYN 210
            D +  +K  DFG +  F  G   +   G+P Y APEL    KY G E+D+WS G+ILY 
Sbjct: 147 -DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           L+SG+ PF  ++    L  +  R +  K      +S+  ++L+++ LI +P+ + T+ QI
Sbjct: 206 LVSGSLPFDGQN----LKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
Query: 271 LKHPWLN 277
           +K  W+N
Sbjct: 262 MKDRWMN 268

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG + D +    R  E+ A + FR +V+A+  CH   I+HRDLK EN +   
Sbjct: 89  YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL-- 146
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYN 210
            D +  +K  DFG +  F  G   +   G+P Y APEL    KY G E+D+WS G+ILY 
Sbjct: 147 -DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           L+SG+ PF  ++    L  +  R +  K      +S+  ++L+++ LI +P+ + T+ QI
Sbjct: 206 LVSGSLPFDGQN----LKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
Query: 271 LKHPWLN 277
           +K  W+N
Sbjct: 262 MKDRWMN 268

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 8/187 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG + D +    R  E+ A + FR +V+A+  CH   I+HRDLK EN +   
Sbjct: 89  YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL-- 146
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYN 210
            D +  +K  DFG +  F  G   +   G P Y APEL    KY G E+D+WS G+ILY 
Sbjct: 147 -DADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           L+SG+ PF  ++    L  +  R +  K      +S+  ++L+++ LI +P+ + T+ QI
Sbjct: 206 LVSGSLPFDGQN----LKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
Query: 271 LKHPWLN 277
           +K  W+N
Sbjct: 262 MKDRWMN 268

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 96/187 (51%), Gaps = 27/187 (14%)
Query: 96  EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
           E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+  
Sbjct: 95  ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 154
Query: 154 ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            NA LK TDFG A         +E  G             KY K  D+WS G+I+Y LL 
Sbjct: 155 PNAILKLTDFGFA---------KETTGE------------KYDKSCDMWSLGVIMYILLC 193
Query: 214 GAQPFWAESLY----GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           G  PF++        G  T I   + +F +  W  +S   K LIR +L  +P  ++T+ +
Sbjct: 194 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 253
Query: 270 ILKHPWL 276
            + HPW+
Sbjct: 254 FMNHPWI 260

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 136/295 (46%), Gaps = 38/295 (12%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE-------------- 96
           + IAE+L RGE G ++ C E S+   +  K + K   +D+  +K+E              
Sbjct: 7   YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIARHRNILH 65
Query: 97  ----------------HCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMH 139
                              G  + +RI+       ER   S    V  AL   HS+ I H
Sbjct: 66  LHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGH 125
Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEI 199
            D++PEN I+ T   ++T+K  +FG A   + G  +  +   P Y APE+          
Sbjct: 126 FDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTAT 184
Query: 200 DIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR 259
           D+WS G ++Y LLSG  PF AE+    +  IM+ E  F  + +  IS  A D + R+L++
Sbjct: 185 DMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVK 244
Query: 260 DPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIV 314
           +  +++T ++ L+HPWL     +  +R + T +I  +K  R    L K  L ++V
Sbjct: 245 ERKSRMTASEALQHPWLK----QKIER-VSTKVIRTLKHRRYYHTLIKKDLNMVV 294

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score =  118 bits (295), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 122/255 (47%), Gaps = 34/255 (13%)
Query: 55  EELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE------------------ 96
           E L  G  G+++ C E +TGL+ A K I      D+  +K E                  
Sbjct: 95  EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 97  ------------HCDGGTLVDRISDRERY--TERAAASVFRSVVNALHACHSNGIMHRDL 142
                       + DGG L DRI D E Y  TE       + +   +   H   I+H DL
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMYILHLDL 213
Query: 143 KPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIW 202
           KPEN I   + +   +K  DFGLA  ++  +  +   GTP ++APE++         D+W
Sbjct: 214 KPEN-ILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMW 272
Query: 203 SAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN 262
           S G+I Y LLSG  PF  ++   TL  I++   D + + +  IS  AK+ I ++LI++ +
Sbjct: 273 SVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKS 332
Query: 263 NQITVAQILKHPWLN 277
            +I+ ++ LKHPWL+
Sbjct: 333 WRISASEALKHPWLS 347

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 45/272 (16%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------- 88
           + + E++  G       C   +T  +FA K I K+ +                       
Sbjct: 24  YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKD 83
Query: 89  --DEG---YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
             D+G   Y+  E   GG L+D+I  ++ ++ER A++V  ++   +   H+ G++HRDLK
Sbjct: 84  VYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLK 143
Query: 144 PENFIFTTDDENA-TLKATDFGLAFFFEEGKVYEEVVGTPLY----MAPELLGPCKYGKE 198
           P N ++  +  N  +++  DFG   F ++ +    ++ TP Y    +APE+L    Y   
Sbjct: 144 PSNILYVDESGNPESIRICDFG---FAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAA 200
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR----EIDFKSDPWPTISSSAKDLIR 254
            DIWS G++LY  L+G  PF A     T   I++R    +       W ++S +AKDL+ 
Sbjct: 201 CDIWSLGVLLYTXLTGYTPF-ANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVS 259
Query: 255 RMLIRDPNNQITVAQILKHPWLNYENGEAWDR 286
           + L  DP+ ++T A +L+HPW+ +     WD+
Sbjct: 260 KXLHVDPHQRLTAALVLRHPWIVH-----WDQ 286

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 8/187 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG + D +       E+ A + FR +V+A+  CH   I+HRDLK EN +   
Sbjct: 82  YLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL-- 139
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYN 210
            D +  +K  DFG +  F  G   +   G+P Y APEL    KY G E+D+WS G+ILY 
Sbjct: 140 -DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 198
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           L+SG+ PF  ++    L  +  R +  K      +S+  ++L+++ LI +P+ + T+ QI
Sbjct: 199 LVSGSLPFDGQN----LKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 254
Query: 271 LKHPWLN 277
           +K  W+N
Sbjct: 255 MKDRWMN 261

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 28/219 (12%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E   GG+++  I  ++ + ER A+ V R V  AL   H+ GI HRDLKPEN +  +
Sbjct: 87  YLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCES 146
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEV--------VGTPLYMAPELL-----GPCKYGKE 198
            ++ + +K  DF L    +       +         G+  YMAPE++         Y K 
Sbjct: 147 PEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKR 206
Query: 199 IDIWSAGLILYNLLSGAQPF---------WAESLYGTLT------AIMSREIDFKSDPWP 243
            D+WS G++LY +LSG  PF         W       +       +I   + +F    W 
Sbjct: 207 CDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWA 266
Query: 244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGE 282
            ISS AKDLI ++L+RD   +++ AQ+L+HPW+  +  E
Sbjct: 267 HISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAPE 305

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 8/187 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG + D +    R  E+ A + FR +V+A+  CH   I+HRDLK EN +   
Sbjct: 89  YLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL-- 146
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYN 210
            D +  +K  DFG +  F  G   +   G P Y APEL    KY G E+D+WS G+ILY 
Sbjct: 147 -DADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           L+SG+ PF  ++    L  +  R +  K       S+  ++L+++ LI +P+ + T+ QI
Sbjct: 206 LVSGSLPFDGQN----LKELRERVLRGKYRIPFYXSTDCENLLKKFLILNPSKRGTLEQI 261
Query: 271 LKHPWLN 277
            K  W N
Sbjct: 262 XKDRWXN 268

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 132/246 (53%), Gaps = 13/246 (5%)
Query: 40  LGKAYEDIKLHFTIAEELCRGES--GRIYLCTENSTGLQFACKSISKTSKSDEGYLKREH 97
           L + YED + +  +  ELC G     ++ +  ++STG       + KT          E 
Sbjct: 93  LYEVYED-EQYICLVMELCHGGHLLDKLNVFIDDSTGK--CAMDVVKTQICPCPECNEEA 149
Query: 98  CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENAT 157
            +G     R S      E+  +++ R + +ALH  H+ GI HRD+KPENF+F+T+ ++  
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN-KSFE 208
Query: 158 LKATDFGLA---FFFEEGKVYEEV--VGTPLYMAPELLGPCK--YGKEIDIWSAGLILYN 210
           +K  DFGL+   +    G+ Y      GTP ++APE+L      YG + D WSAG++L+ 
Sbjct: 209 IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           LL GA PF   +   T++ ++++++ F++  +  +S  A+DL+  +L R+ + +    + 
Sbjct: 269 LLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRA 328
Query: 271 LKHPWL 276
           L+HPW+
Sbjct: 329 LQHPWI 334

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 106/217 (48%), Gaps = 28/217 (12%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D  YL  E   GG+++  I  R  + E  A+ V + V +AL   H+ GI HRDLKPEN +
Sbjct: 84  DRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Query: 149 FTTDDENATLKATDFGLAFFFEEGKVYEEV--------VGTPLYMAPELLGPCK-----Y 195
               ++ + +K  DFGL    +       +         G+  YMAPE++         Y
Sbjct: 144 CEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 196 GKEIDIWSAGLILYNLLSGAQPF---------W--AESLYGT----LTAIMSREIDFKSD 240
            K  D+WS G+ILY LLSG  PF         W   E+          +I   + +F   
Sbjct: 204 DKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK 263
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
            W  IS +AKDLI ++L+RD   +++ AQ+L+HPW+ 
Sbjct: 264 DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 6/189 (3%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           DE ++  E  +GG L D I    R  E   A+V  +V+ AL   H+ G++HRD+K ++ +
Sbjct: 99  DELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 157
Query: 149 FTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            T D     +K +DFG  A   +E    + +VGTP +MAPEL+    YG E+DIWS G++
Sbjct: 158 LTHD---GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 214
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           +  ++ G  P++ E     +  I    +  +      +S S K  + R+L+RDP  + T 
Sbjct: 215 VIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 273
Query: 268 AQILKHPWL 276
           A++LKHP+L
Sbjct: 274 AELLKHPFL 282

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score =  115 bits (288), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 6/189 (3%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           DE ++  E  +GG L D I    R  E   A+V  +V+ AL   H+ G++HRD+K ++ +
Sbjct: 90  DELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 148
Query: 149 FTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            T D     +K +DFG  A   +E    + +VGTP +MAPEL+    YG E+DIWS G++
Sbjct: 149 LTHD---GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 205
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           +  ++ G  P++ E     +  I    +  +      +S S K  + R+L+RDP  + T 
Sbjct: 206 VIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 264
Query: 268 AQILKHPWL 276
           A++LKHP+L
Sbjct: 265 AELLKHPFL 273

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score =  115 bits (288), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 6/189 (3%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           DE ++  E  +GG L D I    R  E   A+V  +V+ AL   H+ G++HRD+K ++ +
Sbjct: 94  DELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 152
Query: 149 FTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            T D     +K +DFG  A   +E    + +VGTP +MAPEL+    YG E+DIWS G++
Sbjct: 153 LTHD---GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 209
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           +  ++ G  P++ E     +  I    +  +      +S S K  + R+L+RDP  + T 
Sbjct: 210 VIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 268
Query: 268 AQILKHPWL 276
           A++LKHP+L
Sbjct: 269 AELLKHPFL 277

>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166

Iteration: 1
 Score =  115 bits (288), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 100/172 (58%), Gaps = 18/172 (10%)
Query: 297 KQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTL 356
           KQF A +K KK AL+VI E+L  EEI   KE F  +D + SG +T++E KAGL ++G+ L
Sbjct: 1   KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 357 TEVDVKQYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMI 407
            E ++    QAAD+D +GT         TL+L+ ++ +D     F  F K          
Sbjct: 61  KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDG-------- 112
Query: 408 SIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
           S YIT DEL+ A +E+ + +D  I+E+  +VD+D DGRI Y EF A  + G+
Sbjct: 113 SGYITPDELQQACEEFGV-EDVRIEELXRDVDQDNDGRIDYNEFVAXXQKGS 163

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score =  115 bits (288), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 6/189 (3%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           DE ++  E  +GG L D I    R  E   A+V  +V+ AL   H+ G++HRD+K ++ +
Sbjct: 101 DELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 159
Query: 149 FTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            T D     +K +DFG  A   +E    + +VGTP +MAPEL+    YG E+DIWS G++
Sbjct: 160 LTHD---GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 216
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           +  ++ G  P++ E     +  I    +  +      +S S K  + R+L+RDP  + T 
Sbjct: 217 VIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 275
Query: 268 AQILKHPWL 276
           A++LKHP+L
Sbjct: 276 AELLKHPFL 284

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score =  114 bits (286), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 6/189 (3%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           DE ++  E  +GG L D I    R  E   A+V  +V+ AL   H+ G++HRD+K ++ +
Sbjct: 144 DELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 202
Query: 149 FTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            T D     +K +DFG  A   +E    + +VGTP +MAPEL+    YG E+DIWS G++
Sbjct: 203 LTHD---GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 259
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           +  ++ G  P++ E     +  I    +  +      +S S K  + R+L+RDP  + T 
Sbjct: 260 VIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 318
Query: 268 AQILKHPWL 276
           A++LKHP+L
Sbjct: 319 AELLKHPFL 327

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score =  114 bits (286), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 6/189 (3%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           DE ++  E  +GG L D I    R  E   A+V  +V+ AL   H+ G++HRD+K ++ +
Sbjct: 221 DELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 279
Query: 149 FTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            T D     +K +DFG  A   +E    + +VGTP +MAPEL+    YG E+DIWS G++
Sbjct: 280 LTHD---GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 336
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           +  ++ G  P++ E     +  I    +  +      +S S K  + R+L+RDP  + T 
Sbjct: 337 VIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 395
Query: 268 AQILKHPWL 276
           A++LKHP+L
Sbjct: 396 AELLKHPFL 404

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score =  114 bits (286), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR-------------- 95
           ++ I EEL  G  G ++ C E +TG  F  K I+     D+  +K               
Sbjct: 52  YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLI 111
Query: 96  ----------------EHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIM 138
                           E   GG L DRI+  + + +E    +  R     L   H + I+
Sbjct: 112 NLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV 171
Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           H D+KPEN +  T  + +++K  DFGLA      ++ +    T  + APE++     G  
Sbjct: 172 HLDIKPENIMCET-KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY 230
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
            D+W+ G++ Y LLSG  PF  E    TL  +   + +F  D + ++S  AKD I+ +L 
Sbjct: 231 TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQ 290
Query: 259 RDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQ 298
           ++P  ++TV   L+HPWL  ++     R I ++  ++++Q
Sbjct: 291 KEPRKRLTVHDALEHPWLKGDHSNLTSR-IPSSRYNKIRQ 329

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 107/217 (49%), Gaps = 28/217 (12%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D  YL  E   GG+++  I  R  + E  A+ V + V +AL   H+ GI HRDLKPEN +
Sbjct: 84  DRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Query: 149 FTTDDENATLKATDF----GLAFFFEEGKVYEEVVGTPL----YMAPELLGPCK-----Y 195
               ++ + +K  DF    G+    +   +    + TP     YMAPE++         Y
Sbjct: 144 CEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 196 GKEIDIWSAGLILYNLLSGAQPF---------W--AESLYGT----LTAIMSREIDFKSD 240
            K  D+WS G+ILY LLSG  PF         W   E+          +I   + +F   
Sbjct: 204 DKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK 263
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
            W  IS +AKDLI ++L+RD   +++ AQ+L+HPW+ 
Sbjct: 264 DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score =  112 bits (281), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 116/260 (44%), Gaps = 41/260 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + KT     G                   
Sbjct: 14  FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    R+ E+  A+    + NAL  CHS  +
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +   N  LK  DFG +      +  + + GT  Y+ PE++    + +
Sbjct: 134 IHRDIKPENLLLGS---NGELKIADFGWSVHAPSSR-RDTLCGTLDYLPPEMIEGRMHDE 189
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPD----FVTEGARDLISRLL 245
Query: 258 IRDPNNQITVAQILKHPWLN 277
             + + ++T+A++L+HPW+ 
Sbjct: 246 KHNASQRLTLAEVLEHPWIK 265

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score =  111 bits (278), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 41/260 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + KT     G                   
Sbjct: 14  FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    R+ E+  A+    + NAL  CHS  +
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +   N  LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 134 IHRDIKPENLLLGS---NGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDE 189
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPD----FVTEGARDLISRLL 245
Query: 258 IRDPNNQITVAQILKHPWLN 277
             + + ++T+A++L+HPW+ 
Sbjct: 246 KHNASQRLTLAEVLEHPWIK 265

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 18/195 (9%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           +E ++  E   GG L D +S + R  E   A+V  +V+ AL   H+ G++HRD+K ++ +
Sbjct: 115 EELWVLMEFLQGGALTDIVS-QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSIL 173
Query: 149 FTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            T D     +K +DFG  A   ++    + +VGTP +MAPE++    Y  E+DIWS G++
Sbjct: 174 LTLD---GRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIM 230
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK------DLIRRMLIRDP 261
           +  ++ G  P++++S    +  +       +  P P + +S K      D + RML+RDP
Sbjct: 231 VIEMVDGEPPYFSDSPVQAMKRL-------RDSPPPKLKNSHKVSPVLRDFLERMLVRDP 283
Query: 262 NNQITVAQILKHPWL 276
             + T  ++L HP+L
Sbjct: 284 QERATAQELLDHPFL 298

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 115/264 (43%), Gaps = 47/264 (17%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKT------------------------- 85
           F I   L  G  GR++L      G  +A K + K                          
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 86  --------SKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                     + + ++  ++ +GG L   +   +R+    A      V  AL   HS  I
Sbjct: 68  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           ++RDLKPEN +    D+N  +K TDFG A +  +  V   + GTP Y+APE++    Y K
Sbjct: 128 IYRDLKPENILL---DKNGHIKITDFGFAKYVPD--VTYXLCGTPDYIAPEVVSTKPYNK 182
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
            ID WS G+++Y +L+G  PF+  +   T   I++ E+ F     P  +   KDL+ R++
Sbjct: 183 SIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSRLI 238
Query: 258 IRDPNNQITVAQ-----ILKHPWL 276
            RD + ++   Q     +  HPW 
Sbjct: 239 TRDLSQRLGNLQNGTEDVKNHPWF 262

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score =  108 bits (269), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 43/272 (15%)
Query: 60  GESGRIYLCTENSTGLQFACKSI------------------------------SKTSKSD 89
           G +G + + TE  TG Q A K +                              S     D
Sbjct: 56  GSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGD 115
Query: 90  EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF 149
           E ++  E  +GG L D I    R  E   A+V  SV+ AL   H+ G++HRD+K ++ + 
Sbjct: 116 ELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL 174
Query: 150 TTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
           T+D     +K +DFG  A   +E    + +VGTP +MAPE++    YG E+DIWS G+++
Sbjct: 175 TSD---GRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMV 231
Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVA 268
             ++ G  P++ E     +  I    +  +      +SS  +  +  ML+R+P+ + T  
Sbjct: 232 IEMIDGEPPYFNEPPLQAMRRIRD-SLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQ 290
Query: 269 QILKHPWLNYENGEAWDRPIDTAIISRVKQFR 300
           ++L HP+L             + I+  ++Q+R
Sbjct: 291 ELLGHPFLKLAGPP-------SCIVPLMRQYR 315

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 102/179 (56%), Gaps = 9/179 (5%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           +L  ++ +GG L   +S RER+TE         +V AL   H  GI++RD+K EN +   
Sbjct: 135 HLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL-- 192
Query: 152 DDENATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELL--GPCKYGKEIDIWSAGLI 207
            D N  +  TDFGL+  F  +E +   +  GT  YMAP+++  G   + K +D WS G++
Sbjct: 193 -DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVL 251
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPNNQI 265
           +Y LL+GA PF  +    +  A +SR I     P+P  +S+ AKDLI+R+L++DP  ++
Sbjct: 252 MYELLTGASPFTVDGEKNS-QAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRL 309

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 46/275 (16%)
Query: 38  TILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR-- 95
           T +G+  ED    F +   L +G    +Y      TGL+ A K I K +    G ++R  
Sbjct: 4   TCIGEKIED----FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQ 59
Query: 96  -------------------------------EHCDGGTLVDRISDRER-YTERAAASVFR 123
                                          E C  G +   + +R + ++E  A     
Sbjct: 60  NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH 119
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTP 182
            ++  +   HS+GI+HRDL   N + T    N  +K  DFGLA   +   + +  + GTP
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLLT---RNMNIKIADFGLATQLKMPHEKHYTLCGTP 176
Query: 183 LYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
            Y++PE+     +G E D+WS G + Y LL G  PF  +++  TL  ++  + +  S   
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS--- 233
Query: 243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
             +S  AKDLI ++L R+P ++++++ +L HP+++
Sbjct: 234 -FLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMS 267

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 113/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +   E+ GT  Y+ PE++    + +
Sbjct: 130 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTELCGTLDYLPPEMIEGRMHDE 185
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 241
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 108/197 (54%), Gaps = 8/197 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG + D +    R  E+ A + FR +V+A+  CH   I+HRDLK EN +   
Sbjct: 90  YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLL-- 147
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYN 210
            D +  +K  DFG +  F  G   +   G+P Y APEL    KY G E+D+WS G+ILY 
Sbjct: 148 -DGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 206
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           L+SG+ PF  ++    L  +  R +  K      +S+  ++L++++L+ +P  + ++ QI
Sbjct: 207 LVSGSLPFDGQN----LKELRERVLRGKYRIPFYMSTDCENLLKKLLVLNPIKRGSLEQI 262
Query: 271 LKHPWLNYENGEAWDRP 287
           +K  W+N  + E   +P
Sbjct: 263 MKDRWMNVGHEEEELKP 279

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 8/186 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           ++  E+  GG L D I    R  E  A  +F+ +++A+  CH + ++HRDLKPEN +   
Sbjct: 87  FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL-- 144
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYN 210
            D +   K  DFGL+    +G+   +  G+P Y APE++ G    G E+DIWS G+ILY 
Sbjct: 145 -DAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYA 203
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           LL G  PF  E +  TL   +   + +  +    ++ S   L+  ML  DP  + T+  I
Sbjct: 204 LLCGTLPFDDEHV-PTLFKKIRGGVFYIPE---YLNRSVATLLMHMLQVDPLKRATIKDI 259
Query: 271 LKHPWL 276
            +H W 
Sbjct: 260 REHEWF 265

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 36  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 96  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 155
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +  +++ GT  Y+ PE++    + +
Sbjct: 156 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRMHDE 211
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 267
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 268 KHNPSQRPMLREVLEHPWI 286

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +  +++ GT  Y+ PE++    + +
Sbjct: 133 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRMHDE 188
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 244
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 245 KHNPSQRPMLREVLEHPWI 263

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 41/260 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E       A K + K+    EG                   
Sbjct: 17  FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E    G L   +    R+ E+ +A+    + +ALH CH   +
Sbjct: 77  ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 136
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +     E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 137 IHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHDE 192
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+W AG++ Y  L G  PF + S   T   I++ ++ F     P +S  +KDLI ++L
Sbjct: 193 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLL 248
Query: 258 IRDPNNQITVAQILKHPWLN 277
              P  ++ +  +++HPW+ 
Sbjct: 249 RYHPPQRLPLKGVMEHPWVK 268

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 41/260 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E       A K + K+    EG                   
Sbjct: 16  FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E    G L   +    R+ E+ +A+    + +ALH CH   +
Sbjct: 76  ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +     E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 136 IHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHDE 191
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+W AG++ Y  L G  PF + S   T   I++ ++ F     P +S  +KDLI ++L
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLL 247
Query: 258 IRDPNNQITVAQILKHPWLN 277
              P  ++ +  +++HPW+ 
Sbjct: 248 RYHPPQRLPLKGVMEHPWVK 267

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E ++    A K + K      G                   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 70  ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKV 129
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 130 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHDE 185
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPD----FVTEGARDLISRLL 241
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +  + + GT  Y+ PE++    + +
Sbjct: 131 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RDTLCGTLDYLPPEMIEGRMHDE 186
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 242
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 243 KHNPSQRPMLREVLEHPWI 261

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +   ++ GT  Y+ PE++    + +
Sbjct: 131 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDE 186
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 242
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 243 KHNPSQRPMLREVLEHPWI 261

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           ++  E+  GG L D I    R  E  A  +F+ +++A+  CH + ++HRDLKPEN +   
Sbjct: 87  FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL-- 144
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYN 210
            D +   K  DFGL+    +G+      G+P Y APE++ G    G E+DIWS G+ILY 
Sbjct: 145 -DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYA 203
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           LL G  PF  E +  TL   +   + +  +    ++ S   L+  ML  DP  + T+  I
Sbjct: 204 LLCGTLPFDDEHV-PTLFKKIRGGVFYIPE---YLNRSVATLLMHMLQVDPLKRATIKDI 259
Query: 271 LKHPWL 276
            +H W 
Sbjct: 260 REHEWF 265

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +   ++ GT  Y+ PE++    + +
Sbjct: 130 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDE 185
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 241
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +   ++ GT  Y+ PE++    + +
Sbjct: 130 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDE 185
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 241
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +   ++ GT  Y+ PE++    + +
Sbjct: 135 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDE 190
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 246
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 247 KHNPSQRPMLREVLEHPWI 265

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 8/186 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           ++  E+  GG L D I    R  E+ +  +F+ +++ +  CH + ++HRDLKPEN +   
Sbjct: 92  FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL-- 149
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYN 210
            D +   K  DFGL+    +G+      G+P Y APE++ G    G E+DIWS+G+ILY 
Sbjct: 150 -DAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYA 208
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           LL G  PF  + +  TL   +   I +       ++ S   L++ ML  DP  + T+  I
Sbjct: 209 LLCGTLPFDDDHV-PTLFKKICDGIFYTPQ---YLNPSVISLLKHMLQVDPMKRATIKDI 264
Query: 271 LKHPWL 276
            +H W 
Sbjct: 265 REHEWF 270

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 133 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHDE 188
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 244
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 245 KHNPSQRPMLREVLEHPWI 263

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 12  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 72  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 132 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHDE 187
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 243
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 244 KHNPSQRPMLREVLEHPWI 262

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 130 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHDE 185
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 241
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 133 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDE 188
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 244
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 245 KHNPSQRPMLREVLEHPWI 263

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 130 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHDE 185
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 241
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 21/212 (9%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG LV+ +S+ +   E+ A      VV AL A HS G++HRD+KP+N +   
Sbjct: 151 YMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL-- 207
Query: 152 DDENATLKATDFGLAFFFEE-GKVY-EEVVGTPLYMAPELL----GPCKYGKEIDIWSAG 205
            D++  LK  DFG     +E G V+ +  VGTP Y++PE+L    G   YG+E D WS G
Sbjct: 208 -DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 266
Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSRE--IDFKSDPWPTISSSAKDLIRRML----IR 259
           + L+ +L G  PF+A+SL GT + IM  +  + F  D    IS  AK+LI   L    +R
Sbjct: 267 VFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED--AEISKHAKNLICAFLTDREVR 324
Query: 260 DPNNQITVAQILKHPWLNYENGEAWDRPIDTA 291
              N   V +I +HP+   +    WD   +TA
Sbjct: 325 LGRN--GVEEIKQHPFFKNDQWN-WDNIRETA 353

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 133 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDE 188
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 244
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 245 KHNPSQRPMLREVLEHPWI 263

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 130 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTXLCGTLDYLPPEMIEGRMHDE 185
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 241
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 133 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHDE 188
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 244
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 245 KHNPSQRPMLREVLEHPWI 263

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 135 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDE 190
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 246
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 247 KHNPSQRPMLREVLEHPWI 265

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 14  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 133
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 134 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDE 189
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 190 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 245
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 246 KHNPSQRPMLREVLEHPWI 264

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 9   FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 69  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 128
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 129 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDE 184
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 185 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 240
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 241 KHNPSQRPMLREVLEHPWI 259

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 137
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 138 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 197 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 256 PDIKKDRWYNKPLKKGAKRP 275

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 27  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 87  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 146
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 147 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDE 202
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 258
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 259 KHNPSQRPMLREVLEHPWI 277

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 130 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDE 185
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 241
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 137
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 138 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 197 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 256 PDIKKDRWYNKPLKKGAKRP 275

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 138
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 139 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 197
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 198 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 257 PDIKKDRWYNKPLKKGAKRP 276

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 79  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 136
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 137 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 195
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 196 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 254
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 255 PDIKKDRWYNKPLKKGAKRP 274

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 138
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 139 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 197
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 198 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 257 PDIKKDRWYNKPLKKGAKRP 276

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 138
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 139 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 197
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 198 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 257 PDIKKDRWYNKPLKKGAKRP 276

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 138
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 139 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 197
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 198 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 257 PDIKKDRWYNKPLKKGAKRP 276

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  104 bits (260), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 137
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 138 -DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 197 LTAMLAGELP-WDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 256 PDIKKDRWYNKPLKKGAKRP 275

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 137
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 138 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 197 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 256 PDIKKDRWYNKPLKKGAKRP 275

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 138
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 139 -DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIV 197
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 198 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 257 PDIKKDRWYNKPLKKGAKRP 276

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 137
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 138 -DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 197 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 256 PDIKKDRWYNKPLKKGAKRP 275

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 36  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 96  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 155
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 156 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDE 211
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 267
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 268 KHNPSQRPMLREVLEHPWI 286

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 138
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 139 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 197
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 198 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 257 PDIKKDRWYNKPLKKGAKRP 276

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 137
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 138 -DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 197 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 256 PDIKKDRWYNKPLKKGAKRP 275

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 137
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 138 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 197 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
Query: 268 AQILKHPWLNYENGEAWDRP 287
             I K  W N    +   RP
Sbjct: 256 PDIKKDRWYNKPLKKGAKRP 275

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 137
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 138 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 197 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
Query: 268 AQILKHPWLN 277
             I K  W N
Sbjct: 256 PDIKKDRWYN 265

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 138
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 139 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 197
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 198 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
Query: 268 AQILKHPWLN 277
             I K  W N
Sbjct: 257 PDIKKDRWYN 266

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 137
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 138 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 197 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
Query: 268 AQILKHPWLN 277
             I K  W N
Sbjct: 256 PDIKKDRWYN 265

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 137
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 138 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 197 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
Query: 268 AQILKHPWLN 277
             I K  W N
Sbjct: 256 PDIKKDRWYN 265

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   G +   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 135 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLXGTLDYLPPEMIEGRMHDE 190
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 246
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 247 KHNPSQRPMLREVLEHPWI 265

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 137
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 138 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 197 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
Query: 268 AQILKHPWLN 277
             I K  W N
Sbjct: 256 PDIKKDRWYN 265

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 138
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 139 -DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 197
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 198 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
Query: 268 AQILKHPWLN 277
             I K  W N
Sbjct: 257 PDIKKDRWYN 266

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+C GG L DRI       E  A   F  ++  +   H  GI HRD+KPEN +   
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-- 137
Query: 152 DDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKE-IDIWSAGLI 207
            DE   LK +DFGLA  F      ++  ++ GT  Y+APELL   ++  E +D+WS G++
Sbjct: 138 -DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           L  +L+G  P W +           +E     +PW  I S+   L+ ++L+ +P+ +IT+
Sbjct: 197 LTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
Query: 268 AQILKHPWLN 277
             I K  W N
Sbjct: 256 PDIKKDRWYN 265

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 108/212 (50%), Gaps = 26/212 (12%)
Query: 92  YLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           YL  ++  GG L+  +S  E R  E  A      +V A+ + H    +HRD+KP+N +  
Sbjct: 150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM- 208
Query: 151 TDDENATLKATDFGLAF-FFEEGKVYEEV-VGTPLYMAPELL-----GPCKYGKEIDIWS 203
             D N  ++  DFG      E+G V   V VGTP Y++PE+L     G  +YG E D WS
Sbjct: 209 --DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWS 266
Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT----ISSSAKDLIRRMLIR 259
            G+ +Y +L G  PF+AESL  T   IM+ +  F+   +PT    +S +AKDLIRR++  
Sbjct: 267 LGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPTQVTDVSENAKDLIRRLICS 323
Query: 260 DPN--NQITVAQILKHP------WLNYENGEA 283
             +   Q  +    KHP      W N  N EA
Sbjct: 324 REHRLGQNGIEDFKKHPFFSGIDWDNIRNCEA 355

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E       A K + K      G                   
Sbjct: 7   FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 67  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 126
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 127 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDE 182
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 183 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 238
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 239 KHNPSQRPMLREVLEHPWI 257

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 131 IHRDIKPENLLLGSAGE---LKIADFGWSCHAPSSR-RTTLSGTLDYLPPEMIEGRMHDE 186
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 242
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 243 KHNPSQRPMLREVLEHPWI 261

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE +    + +
Sbjct: 135 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEXIEGRXHDE 190
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 246
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 247 KHNPSQRPXLREVLEHPWI 265

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   G +   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 135 IHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDE 190
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 246
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 247 KHNPSQRPMLREVLEHPWI 265

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  +FG +      +    + GT  Y+ PE++    + +
Sbjct: 133 IHRDIKPENLLLGSAGE---LKIANFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDE 188
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 244
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 245 KHNPSQRPMLREVLEHPWI 263

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 12  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 72  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +  +  E   LK  +FG +      +    + GT  Y+ PE++    + +
Sbjct: 132 IHRDIKPENLLLGSAGE---LKIANFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDE 187
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+L
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLL 243
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ +  + ++L+HPW+
Sbjct: 244 KHNPSQRPMLREVLEHPWI 262

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score =  102 bits (255), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 116/213 (54%), Gaps = 23/213 (10%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG LV+ +S+ +   E+ A      VV AL A HS G +HRD+KP+N +   
Sbjct: 150 YMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL-- 206
Query: 152 DDENATLKATDFGLAF-FFEEGKVY-EEVVGTPLYMAPELL----GPCKYGKEIDIWSAG 205
            D++  LK  DFG      +EG V  +  VGTP Y++PE+L    G   YG+E D WS G
Sbjct: 207 -DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 265
Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSRE--IDFKSDPWPTISSSAKDLIRRML----IR 259
           + LY +L G  PF+A+SL GT + IM+ +  + F  D    IS  AK+LI   L    +R
Sbjct: 266 VFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLICAFLTDREVR 323
Query: 260 DPNNQITVAQILKHPWLNYENGE-AWDRPIDTA 291
              N   V +I +H  L ++N + AW+   DT 
Sbjct: 324 LGRN--GVEEIKRH--LFFKNDQWAWETLRDTV 352

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 97/170 (57%), Gaps = 14/170 (8%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG LV+ +S+ +   E+ A      VV AL A HS G +HRD+KP+N +   
Sbjct: 150 YMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL-- 206
Query: 152 DDENATLKATDFGLAF-FFEEGKVY-EEVVGTPLYMAPELL----GPCKYGKEIDIWSAG 205
            D++  LK  DFG      +EG V  +  VGTP Y++PE+L    G   YG+E D WS G
Sbjct: 207 -DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 265
Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSRE--IDFKSDPWPTISSSAKDLI 253
           + LY +L G  PF+A+SL GT + IM+ +  + F  D    IS  AK+LI
Sbjct: 266 VFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLI 313

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score =  102 bits (254), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 97/170 (57%), Gaps = 14/170 (8%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG LV+ +S+ +   E+ A      VV AL A HS G +HRD+KP+N +   
Sbjct: 145 YMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL-- 201
Query: 152 DDENATLKATDFGLAF-FFEEGKVY-EEVVGTPLYMAPELL----GPCKYGKEIDIWSAG 205
            D++  LK  DFG      +EG V  +  VGTP Y++PE+L    G   YG+E D WS G
Sbjct: 202 -DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 260
Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSRE--IDFKSDPWPTISSSAKDLI 253
           + LY +L G  PF+A+SL GT + IM+ +  + F  D    IS  AK+LI
Sbjct: 261 VFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLI 308

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 35/289 (12%)
Query: 54  AEELCRGESGRIYLCTENSTGLQFACKSISKTSK-------------------------- 87
           ++EL RG+   +  C   STG ++A K + K  +                          
Sbjct: 34  SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 88  -------SDEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIM 138
                  + E  L  E+  GG +         E  +E     + + ++  ++  H N I+
Sbjct: 94  LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153
Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           H DLKP+N + ++      +K  DFG++          E++GTP Y+APE+L        
Sbjct: 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTA 213
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
            D+W+ G+I Y LL+   PF  E    T   I    +D+  + + ++S  A D I+ +L+
Sbjct: 214 TDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLV 273
Query: 259 RDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKK 307
           ++P  + T    L H WL   + E    P +T+  S+ +     S   K
Sbjct: 274 KNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHSVRSSEDK 322

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 10/192 (5%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D  Y+  E  + G +++ +   +  +E  A   F+ ++  +   H   I+HRD+KP N +
Sbjct: 111 DHLYMVFELVNQGPVME-VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLL 169
Query: 149 FTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCK---YGKEIDIWSA 204
                E+  +K  DFG++  F+    +    VGTP +MAPE L   +    GK +D+W+ 
Sbjct: 170 VG---EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAM 226
Query: 205 GLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQ 264
           G+ LY  + G  PF  E +    + I S+ ++F   P   I+   KDLI RML ++P ++
Sbjct: 227 GVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESR 284
Query: 265 ITVAQILKHPWL 276
           I V +I  HPW+
Sbjct: 285 IVVPEIKLHPWV 296

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E C   +L++    R+  TE  A    R  +  +   H+N ++HRDLK  N +F  
Sbjct: 118 YVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLN 176
Query: 152 DDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGK--EIDIWSAGLIL 208
           DD +  +K  DFGLA   E +G+  +++ GTP Y+APE+L  CK G   E+DIWS G IL
Sbjct: 177 DDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL--CKKGHSFEVDIWSLGCIL 232
Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVA 268
           Y LL G  PF    L  T   I   E          I+  A  LIRRML  DP  + +VA
Sbjct: 233 YTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----INPVASALIRRMLHADPTLRPSVA 288
Query: 269 QIL 271
           ++L
Sbjct: 289 ELL 291

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E C   +L++    R+  TE  A    R  +  +   H+N ++HRDLK  N +F  
Sbjct: 102 YVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLN 160
Query: 152 DDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGK--EIDIWSAGLIL 208
           DD +  +K  DFGLA   E +G+  +++ GTP Y+APE+L  CK G   E+DIWS G IL
Sbjct: 161 DDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL--CKKGHSFEVDIWSLGCIL 216
Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVA 268
           Y LL G  PF    L  T   I   E          I+  A  LIRRML  DP  + +VA
Sbjct: 217 YTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----INPVASALIRRMLHADPTLRPSVA 272
Query: 269 QIL 271
           ++L
Sbjct: 273 ELL 275

>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 91/152 (59%), Gaps = 18/152 (11%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            E L  EEI   KE FK +DT++SGT+T+DE K GL ++GS L E ++K  M AADID +
Sbjct: 1   AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 374 GT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           GT         T++L+ ++ ++  +  F+ F K          S YIT DE++ A K++ 
Sbjct: 61  GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDG--------SGYITLDEIQQACKDFG 112
Query: 425 MGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           + DD  I +++ E+D+D DG+I Y EF A M+
Sbjct: 113 L-DDIHIDDMIKEIDQDNDGQIDYGEFAAMMR 143

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+  GG L +RI +  R++E  A   F+ +++ +  CH+  + HRDLK EN +       
Sbjct: 94  EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA- 152
Query: 156 ATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSG 214
             LK  DFG +         +  VGTP Y+APE+L   +Y GK  D+WS G+ LY +L G
Sbjct: 153 PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
Query: 215 AQPF----WAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           A PF      ++   T+  I++  + +    +  IS   + LI R+ + DP  +I++ +I
Sbjct: 213 AYPFEDPEEPKNFRKTIHRILN--VQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 270
Query: 271 LKHPWL 276
             H W 
Sbjct: 271 RNHEWF 276

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 95/183 (51%), Gaps = 12/183 (6%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E C   +L++    R+  TE  A    R  +  +   H+N ++HRDLK  N +F  
Sbjct: 118 YVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLN 176
Query: 152 DDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGK--EIDIWSAGLIL 208
           DD +  +K  DFGLA   E +G+  + + GTP Y+APE+L  CK G   E+DIWS G IL
Sbjct: 177 DDMD--VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVL--CKKGHSFEVDIWSLGCIL 232
Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVA 268
           Y LL G  PF    L  T   I   E          I+  A  LIRRML  DP  + +VA
Sbjct: 233 YTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----INPVASALIRRMLHADPTLRPSVA 288
Query: 269 QIL 271
           ++L
Sbjct: 289 ELL 291

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+  GG L +RI +  R++E  A   F+ +++ +  CH+  + HRDLK EN +       
Sbjct: 95  EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA- 153
Query: 156 ATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSG 214
             LK  DFG +         +  VGTP Y+APE+L   +Y GK  D+WS G+ LY +L G
Sbjct: 154 PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Query: 215 AQPF----WAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           A PF      ++   T+  I++  + +    +  IS   + LI R+ + DP  +I++ +I
Sbjct: 214 AYPFEDPEEPKNFRKTIHRILN--VQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
Query: 271 LKHPWL 276
             H W 
Sbjct: 272 RNHEWF 277

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 95/183 (51%), Gaps = 12/183 (6%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E C   +L++    R+  TE  A    R  +  +   H+N ++HRDLK  N +F  
Sbjct: 118 YVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLN 176
Query: 152 DDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGK--EIDIWSAGLIL 208
           DD +  +K  DFGLA   E +G+  + + GTP Y+APE+L  CK G   E+DIWS G IL
Sbjct: 177 DDMD--VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVL--CKKGHSFEVDIWSLGCIL 232
Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVA 268
           Y LL G  PF    L  T   I   E          I+  A  LIRRML  DP  + +VA
Sbjct: 233 YTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----INPVASALIRRMLHADPTLRPSVA 288
Query: 269 QIL 271
           ++L
Sbjct: 289 ELL 291

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 98.2 bits (243), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 36/262 (13%)
Query: 46  DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------ 87
           D K  +T  E++ +G SG +Y   + +TG + A + ++   +                  
Sbjct: 17  DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 76
Query: 88  ------------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN 135
                        DE ++  E+  GG+L D +++     E   A+V R  + AL   HSN
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN 135
Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
            ++HRD+K +N +   D    ++K TDFG  A    E     E+VGTP +MAPE++    
Sbjct: 136 QVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKA 192
Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR 254
           YG ++DIWS G++   ++ G  P+  E+    L  I +       +P   +S+  +D + 
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLN 251
Query: 255 RMLIRDPNNQITVAQILKHPWL 276
           R L  D   + +  ++L+H +L
Sbjct: 252 RCLDMDVEKRGSAKELLQHQFL 273

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 13/197 (6%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG L  ++     + E  A      +  AL   H  GI++RDLKPEN +   
Sbjct: 97  YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML-- 154
Query: 152 DDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
            +    +K TDFGL      +G V     GT  YMAPE+L    + + +D WS G ++Y+
Sbjct: 155 -NHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYD 213
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT---- 266
           +L+GA PF  E+   T+  I+  +++      P ++  A+DL++++L R+  +++     
Sbjct: 214 MLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPG 269
Query: 267 -VAQILKHPWLNYENGE 282
              ++  HP+  + N E
Sbjct: 270 DAGEVQAHPFFRHINWE 286

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 13/197 (6%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+  GG L  ++     + E  A      +  AL   H  GI++RDLKPEN +   
Sbjct: 97  YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML-- 154
Query: 152 DDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
            +    +K TDFGL      +G V     GT  YMAPE+L    + + +D WS G ++Y+
Sbjct: 155 -NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYD 213
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT---- 266
           +L+GA PF  E+   T+  I+  +++      P ++  A+DL++++L R+  +++     
Sbjct: 214 MLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPG 269
Query: 267 -VAQILKHPWLNYENGE 282
              ++  HP+  + N E
Sbjct: 270 DAGEVQAHPFFRHINWE 286

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 94/187 (50%), Gaps = 10/187 (5%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+  GG L +RI +  R++E  A   F+ +++ +  CHS  I HRDLK EN +   D   
Sbjct: 96  EYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLL--DGSP 153
Query: 156 AT-LKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLS 213
           A  LK  DFG +         +  VGTP Y+APE+L   +Y GK  D+WS G+ LY +L 
Sbjct: 154 APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLV 213
Query: 214 GAQPF----WAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           GA PF           T+  I+S +     D    IS     LI R+ + DP  +I++ +
Sbjct: 214 GAYPFEDPEEPRDYRKTIQRILSVKYSIPDD--IRISPECCHLISRIFVADPATRISIPE 271
Query: 270 ILKHPWL 276
           I  H W 
Sbjct: 272 IKTHSWF 278

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L   +S    +TE  A      +V+AL   HS  +++RD+K EN +    D++
Sbjct: 85  EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKD 141
Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TDFGL      +G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ G
Sbjct: 142 GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
             PF+ +        I+  EI F      T+S  AK L+  +L +DP  ++
Sbjct: 202 RLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+  GG L +RI +  R++E  A   F+ +++ +  CH+  + HRDLK EN +       
Sbjct: 95  EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA- 153
Query: 156 ATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSG 214
             LK   FG +         ++ VGTP Y+APE+L   +Y GK  D+WS G+ LY +L G
Sbjct: 154 PRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Query: 215 AQPF----WAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           A PF      ++   T+  I++  + +    +  IS   + LI R+ + DP  +I++ +I
Sbjct: 214 AYPFEDPEEPKNFRKTIHRILN--VQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
Query: 271 LKHPWL 276
             H W 
Sbjct: 272 RNHEWF 277

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L   +S    +TE  A      +V+AL   HS  +++RD+K EN +    D++
Sbjct: 90  EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKD 146
Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TDFGL      +G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ G
Sbjct: 147 GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
             PF+ +        I+  EI F      T+S  AK L+  +L +DP  ++
Sbjct: 207 RLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 253

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L   +S    +TE  A      +V+AL   HS  +++RD+K EN +    D++
Sbjct: 85  EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKD 141
Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TDFGL      +G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ G
Sbjct: 142 GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
             PF+ +        I+  EI F      T+S  AK L+  +L +DP  ++
Sbjct: 202 RLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L   +S    +TE  A      +V+AL   HS  +++RD+K EN +    D++
Sbjct: 85  EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKD 141
Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TDFGL      +G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ G
Sbjct: 142 GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
             PF+ +        I+  EI F      T+S  AK L+  +L +DP  ++
Sbjct: 202 RLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L   +S    +TE  A      +V+AL   HS  +++RD+K EN +    D++
Sbjct: 85  EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKD 141
Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TDFGL      +G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ G
Sbjct: 142 GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
             PF+ +        I+  EI F      T+S  AK L+  +L +DP  ++
Sbjct: 202 RLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L   +S    +TE  A      +V+AL   HS  +++RD+K EN +    D++
Sbjct: 88  EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKD 144
Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TDFGL      +G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ G
Sbjct: 145 GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 204
Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
             PF+ +        I+  EI F      T+S  AK L+  +L +DP  ++
Sbjct: 205 RLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 251

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L   +S    +TE  A      +V+AL   HS  +++RD+K EN +    D++
Sbjct: 85  EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKD 141
Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TDFGL      +G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ G
Sbjct: 142 GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
             PF+ +        I+  EI F      T+S  AK L+  +L +DP  ++
Sbjct: 202 RLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 8/186 (4%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+  GG L +RI +  R++E  A   F+ +++ +  CH+  + HRDLK EN +       
Sbjct: 95  EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA- 153
Query: 156 ATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSG 214
             LK   FG +         +  VGTP Y+APE+L   +Y GK  D+WS G+ LY +L G
Sbjct: 154 PRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Query: 215 AQPF----WAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           A PF      ++   T+  I++  + +    +  IS   + LI R+ + DP  +I++ +I
Sbjct: 214 AYPFEDPEEPKNFRKTIHRILN--VQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
Query: 271 LKHPWL 276
             H W 
Sbjct: 272 RNHEWF 277

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 8/186 (4%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+  GG L +RI +  R++E  A   F+ +++ +   H+  + HRDLK EN +       
Sbjct: 95  EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPA- 153
Query: 156 ATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSG 214
             LK  DFG +         +  VGTP Y+APE+L   +Y GK  D+WS G+ LY +L G
Sbjct: 154 PRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Query: 215 AQPF----WAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           A PF      ++   T+  I++  + +    +  IS   + LI R+ + DP  +I++ +I
Sbjct: 214 AYPFEDPEEPKNFRKTIHRILN--VQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
Query: 271 LKHPWL 276
             H W 
Sbjct: 272 RNHEWF 277

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 36/262 (13%)
Query: 46  DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------ 87
           D K  +T  E++ +G SG +Y   + +TG + A + ++   +                  
Sbjct: 17  DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 76
Query: 88  ------------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN 135
                        DE ++  E+  GG+L D +++     E   A+V R  + AL   HSN
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN 135
Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
            ++HRD+K +N +   D    ++K TDFG  A    E      +VGTP +MAPE++    
Sbjct: 136 QVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA 192
Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR 254
           YG ++DIWS G++   ++ G  P+  E+    L  I +       +P   +S+  +D + 
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLN 251
Query: 255 RMLIRDPNNQITVAQILKHPWL 276
           R L  D   + +  ++L+H +L
Sbjct: 252 RCLEMDVEKRGSAKELLQHQFL 273

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 36/262 (13%)
Query: 46  DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------ 87
           D K  +T  E++ +G SG +Y   + +TG + A + ++   +                  
Sbjct: 17  DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 76
Query: 88  ------------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN 135
                        DE ++  E+  GG+L D +++     E   A+V R  + AL   HSN
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN 135
Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
            ++HRD+K +N +   D    ++K TDFG  A    E      +VGTP +MAPE++    
Sbjct: 136 QVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192
Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR 254
           YG ++DIWS G++   ++ G  P+  E+    L  I +       +P   +S+  +D + 
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLN 251
Query: 255 RMLIRDPNNQITVAQILKHPWL 276
           R L  D   + +  ++L+H +L
Sbjct: 252 RCLDMDVEKRGSAKELLQHQFL 273

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 41/259 (15%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGY---LKRE--------HCD 99
           F I   L +G+ G +YL  E  +    A K + K+    EG    L+RE        H +
Sbjct: 25  FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 100 GGTLVDRISDRER----------------------YTERAAASVFRSVVNALHACHSNGI 137
              L +   DR R                      + E+  A++   + +AL  CH   +
Sbjct: 85  ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKV 144
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN           LK  DFG +      +  + + GT  Y+ PE++    + +
Sbjct: 145 IHRDIKPEN---LLLGLKGELKIADFGWSVHAPSLR-RKTMCGTLDYLPPEMIEGRMHNE 200
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+W  G++ Y LL G  PF + S   T   I+  ++ F +    ++ + A+DLI ++L
Sbjct: 201 KVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA----SVPTGAQDLISKLL 256
Query: 258 IRDPNNQITVAQILKHPWL 276
             +P+ ++ +AQ+  HPW+
Sbjct: 257 RHNPSERLPLAQVSAHPWV 275

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 36/262 (13%)
Query: 46  DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------ 87
           D K  +T  E++ +G SG +Y   + +TG + A + ++   +                  
Sbjct: 18  DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 77
Query: 88  ------------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN 135
                        DE ++  E+  GG+L D +++     E   A+V R  + AL   HSN
Sbjct: 78  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN 136
Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
            ++HRD+K +N +   D    ++K TDFG  A    E      +VGTP +MAPE++    
Sbjct: 137 QVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA 193
Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR 254
           YG ++DIWS G++   ++ G  P+  E+    L  I +       +P   +S+  +D + 
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLN 252
Query: 255 RMLIRDPNNQITVAQILKHPWL 276
           R L  D   + +  ++++H +L
Sbjct: 253 RCLEMDVEKRGSAKELIQHQFL 274

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 92  YLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           YL  ++  GG L+  +S  E +  E  A      +V A+ + H    +HRD+KP+N +  
Sbjct: 166 YLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL- 224
Query: 151 TDDENATLKATDFGLAF-FFEEGKVYEEV-VGTPLYMAPELL-----GPCKYGKEIDIWS 203
             D N  ++  DFG      ++G V   V VGTP Y++PE+L     G  KYG E D WS
Sbjct: 225 --DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWS 282
Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPN 262
            G+ +Y +L G  PF+AESL  T   IM+ E  F+     T +S  AKDLI+R++     
Sbjct: 283 LGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRER 342
Query: 263 --NQITVAQILKHPW---LNYENGEAWDRP 287
              Q  +    KH +   LN+EN    + P
Sbjct: 343 RLGQNGIEDFKKHAFFEGLNWENIRNLEAP 372

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 92  YLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           YL  ++  GG L+  +S  E +  E  A      +V A+ + H    +HRD+KP+N +  
Sbjct: 150 YLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL- 208
Query: 151 TDDENATLKATDFGLAF-FFEEGKVYEEV-VGTPLYMAPELL-----GPCKYGKEIDIWS 203
             D N  ++  DFG      ++G V   V VGTP Y++PE+L     G  KYG E D WS
Sbjct: 209 --DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWS 266
Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPN 262
            G+ +Y +L G  PF+AESL  T   IM+ E  F+     T +S  AKDLI+R++     
Sbjct: 267 LGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRER 326
Query: 263 --NQITVAQILKHPW---LNYENGEAWDRP 287
              Q  +    KH +   LN+EN    + P
Sbjct: 327 RLGQNGIEDFKKHAFFEGLNWENIRNLEAP 356

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   +K TDFGLA   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIKVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 21/231 (9%)
Query: 73  TGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHAC 132
           T L+F+ K  S        Y+  E+  GG +   +    R++E  A      +V      
Sbjct: 105 TKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           HS  +++RDLKPEN +    D+   +K TDFG A   + G+ +  + GTP Y+APE++  
Sbjct: 159 HSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILS 213
Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
             Y K +D W+ G+++Y + +G  PF+A+        I+S ++ F S      SS  KDL
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDL 269
Query: 253 IRRMLIRD-----PNNQITVAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           +R +L  D      N +  V  I  H W    +  A + R ++   I + K
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 21/231 (9%)
Query: 73  TGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHAC 132
           T L+F+ K  S        Y+  E+  GG +   +    R++E  A      +V      
Sbjct: 105 TKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           HS  +++RDLKPEN +    D+   +K TDFG A   + G+ +  + GTP Y+APE++  
Sbjct: 159 HSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILS 213
Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
             Y K +D W+ G+++Y + +G  PF+A+        I+S ++ F S      SS  KDL
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDL 269
Query: 253 IRRMLIRD-----PNNQITVAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           +R +L  D      N +  V  I  H W    +  A + R ++   I + K
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 121/262 (46%), Gaps = 36/262 (13%)
Query: 46  DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------ 87
           D K  +T  E++ +G SG +Y   + +TG + A + ++   +                  
Sbjct: 18  DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 77
Query: 88  ------------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN 135
                        DE ++  E+  GG+L D +++     E   A+V R  + AL   HSN
Sbjct: 78  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN 136
Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
            ++HR++K +N +   D    ++K TDFG  A    E      +VGTP +MAPE++    
Sbjct: 137 QVIHRNIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 193
Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR 254
           YG ++DIWS G++   ++ G  P+  E+    L  I +       +P   +S+  +D + 
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLN 252
Query: 255 RMLIRDPNNQITVAQILKHPWL 276
           R L  D   + +  ++++H +L
Sbjct: 253 RCLEMDVEKRGSAKELIQHQFL 274

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 21/231 (9%)
Query: 73  TGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHAC 132
           T L+F+ K  S        Y+  E+  GG +   +    R+ E  A      +V      
Sbjct: 105 TKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 158
Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           HS  +++RDLKPEN +    D+   +K TDFG A   + G+ +  + GTP Y+APE++  
Sbjct: 159 HSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILS 213
Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
             Y K +D W+ G+++Y + +G  PF+A+        I+S ++ F S      SS  KDL
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDL 269
Query: 253 IRRMLIRD-----PNNQITVAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           +R +L  D      N +  V  I  H W    +  A + R ++   I + K
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 118 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI-- 175
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   +K TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 176 -DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 233 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 288
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 289 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFGLA   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   +K TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 104 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 161
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            DE   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 162 -DEQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 218
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 219 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 274
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 275 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 306

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN I   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLII-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 175
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 176 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 233 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 288
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 289 VNDIXNHKWFATTDWIAIYQRKVEAPFIPKFK 320

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +D  ++  E C   +L++    R+  TE  A    R +V      H N ++HRDLK  N 
Sbjct: 89  NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 148
Query: 148 IFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGL 206
               D E   +K  DFGLA   E +G+  + + GTP Y+APE+L    +  E+D+WS G 
Sbjct: 149 FLNEDLE---VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 205
Query: 207 ILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT 266
           I+Y LL G  PF    L  T   I   E          I+  A  LI++ML  DP  + T
Sbjct: 206 IMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPT 261
Query: 267 VAQIL 271
           + ++L
Sbjct: 262 INELL 266

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +D  ++  E C   +L++    R+  TE  A    R +V      H N ++HRDLK  N 
Sbjct: 89  NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 148
Query: 148 IFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGL 206
               D E   +K  DFGLA   E +G+  + + GTP Y+APE+L    +  E+D+WS G 
Sbjct: 149 FLNEDLE---VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 205
Query: 207 ILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT 266
           I+Y LL G  PF    L  T   I   E          I+  A  LI++ML  DP  + T
Sbjct: 206 IMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPT 261
Query: 267 VAQIL 271
           + ++L
Sbjct: 262 INELL 266

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R+ E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   +K TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 175
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 176 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 233 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 288
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 289 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 175
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 176 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 233 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 288
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 289 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +D  ++  E C   +L++    R+  TE  A    R +V      H N ++HRDLK  N 
Sbjct: 93  NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 152
Query: 148 IFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGL 206
               D E   +K  DFGLA   E +G+  + + GTP Y+APE+L    +  E+D+WS G 
Sbjct: 153 FLNEDLE---VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 209
Query: 207 ILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT 266
           I+Y LL G  PF    L  T   I   E          I+  A  LI++ML  DP  + T
Sbjct: 210 IMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPT 265
Query: 267 VAQIL 271
           + ++L
Sbjct: 266 INELL 270

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 138 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 195
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 196 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 253 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 308
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 309 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 340

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKDG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 175
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 176 -DQQGYIQVTDFGFAKRVK-GRTWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 233 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 288
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 289 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 118 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 175
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 176 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 233 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 288
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 289 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 175
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 176 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 233 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 288
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 289 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 92  YLKREHCDGGTLVDRIS----DRERYTERAAASVFRSVVNALHACH--SNG---IMHRDL 142
           Y+  E+C+GG L   I+    +R+   E     V   +  AL  CH  S+G   ++HRDL
Sbjct: 83  YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 143 KPENFIFTTDDENATLKATDFGLAFFFEEGKVY-EEVVGTPLYMAPELLGPCKYGKEIDI 201
           KP N      D    +K  DFGLA      + + +E VGTP YM+PE +    Y ++ DI
Sbjct: 143 KPANVFL---DGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDI 199
Query: 202 WSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP 261
           WS G +LY L +   PF A S       I  RE  F+  P+   S    ++I RML    
Sbjct: 200 WSLGCLLYELCALMPPFTAFSQKELAGKI--REGKFRRIPY-RYSDELNEIITRMLNLKD 256
Query: 262 NNQITVAQILKHPWL 276
            ++ +V +IL++P +
Sbjct: 257 YHRPSVEEILENPLI 271

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKAFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 91.7 bits (226), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 110 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 167
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 168 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 225 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 280
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 281 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 312

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKDG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKDG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 91.7 bits (226), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +D  ++  E C   +L++    R+  TE  A    R +V      H N ++HRDLK  N 
Sbjct: 87  NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 146
Query: 148 IFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGL 206
               D E   +K  DFGLA   E +G+  + + GTP Y+APE+L    +  E+D+WS G 
Sbjct: 147 FLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 203
Query: 207 ILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT 266
           I+Y LL G  PF    L  T   I   E          I+  A  LI++ML  DP  + T
Sbjct: 204 IMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPT 259
Query: 267 VAQIL 271
           + ++L
Sbjct: 260 INELL 264

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 91.7 bits (226), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +D  ++  E C   +L++    R+  TE  A    R +V      H N ++HRDLK  N 
Sbjct: 111 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 170
Query: 148 IFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGL 206
               D E   +K  DFGLA   E +G+  + + GTP Y+APE+L    +  E+D+WS G 
Sbjct: 171 FLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 227
Query: 207 ILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT 266
           I+Y LL G  PF    L  T   I   E          I+  A  LI++ML  DP  + T
Sbjct: 228 IMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPT 283
Query: 267 VAQIL 271
           + ++L
Sbjct: 284 INELL 288

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD--------PNN 263
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D        PN 
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLPNG 287
Query: 264 QITVAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
              V  I  H W    +  A + R ++   I + K
Sbjct: 288 ---VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADEPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 103 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 160
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 161 -DQQGYIQVTDFGFAKRVK-GRTWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 217
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 218 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKDG 273
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 274 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 305

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 15/193 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  +   GG L  R+S    +TE         +  AL   HS GI++RDLKPEN +   
Sbjct: 102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL-- 159
Query: 152 DDENATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILY 209
            DE   +K TDFGL+      E K Y    GT  YMAPE++    + +  D WS G++++
Sbjct: 160 -DEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 217
Query: 210 NLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI---- 265
            +L+G  PF  +    T+T I+  ++         +S  A+ L+R +  R+P N++    
Sbjct: 218 EMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRMLFKRNPANRLGAGP 273
Query: 266 -TVAQILKHPWLN 277
             V +I +H + +
Sbjct: 274 DGVEEIKRHSFFS 286

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 15/193 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  +   GG L  R+S    +TE         +  AL   HS GI++RDLKPEN +   
Sbjct: 103 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL-- 160
Query: 152 DDENATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILY 209
            DE   +K TDFGL+      E K Y    GT  YMAPE++    + +  D WS G++++
Sbjct: 161 -DEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 218
Query: 210 NLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI---- 265
            +L+G  PF  +    T+T I+  ++         +S  A+ L+R +  R+P N++    
Sbjct: 219 EMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRMLFKRNPANRLGAGP 274
Query: 266 -TVAQILKHPWLN 277
             V +I +H + +
Sbjct: 275 DGVEEIKRHSFFS 287

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKDG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
           +D  ++  E C   +L++    R+  TE  A    R +V      H N ++HRDLK  N 
Sbjct: 113 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 172
Query: 148 IFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGL 206
               D E   +K  DFGLA   E +G+  + + GTP Y+APE+L    +  E+D+WS G 
Sbjct: 173 FLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 229
Query: 207 ILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT 266
           I+Y LL G  PF    L  T   I   E          I+  A  LI++ML  DP  + T
Sbjct: 230 IMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPT 285
Query: 267 VAQIL 271
           + ++L
Sbjct: 286 INELL 290

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 15/193 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  +   GG L  R+S    +TE         +  AL   HS GI++RDLKPEN +   
Sbjct: 102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL-- 159
Query: 152 DDENATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILY 209
            DE   +K TDFGL+      E K Y    GT  YMAPE++    + +  D WS G++++
Sbjct: 160 -DEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 217
Query: 210 NLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI---- 265
            +L+G  PF  +    T+T I+  ++         +S  A+ L+R +  R+P N++    
Sbjct: 218 EMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRMLFKRNPANRLGAGP 273
Query: 266 -TVAQILKHPWLN 277
             V +I +H + +
Sbjct: 274 DGVEEIKRHSFFS 286

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   +K  DFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R+ E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R+ E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R+ E  A      +V      HS  +++RDLKPEN +   
Sbjct: 110 YMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 167
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 168 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 225 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 280
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 281 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 312

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R+ E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R+ E  A      +V      HS  +++RDLKPEN +   
Sbjct: 112 YMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 169
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 170 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 226
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 227 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 282
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 283 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 314

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R+ E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 112/253 (44%), Gaps = 45/253 (17%)
Query: 50  HFTIAEELCRGESGRIYLC---TENSTGLQFACKSISKTSK------------------- 87
           HF + + L +G  G+++L    T   +G  +A K + K +                    
Sbjct: 29  HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 88  -----------SDEG--YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS 134
                        EG  YL  +   GG L  R+S    +TE         +   L   HS
Sbjct: 89  HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS 148
Query: 135 NGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELLGP 192
            GI++RDLKPEN +    DE   +K TDFGL+      E K Y    GT  YMAPE++  
Sbjct: 149 LGIIYRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVEYMAPEVVNR 204
Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
             +    D WS G++++ +L+G+ PF  +    T+T I+  ++         +S+ A+ L
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQSL 260
Query: 253 IRRMLIRDPNNQI 265
           +R +  R+P N++
Sbjct: 261 LRALFKRNPANRL 273

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R+ E  A      +V      HS  +++RDLKPEN +   
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 175
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 176 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 233 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 288
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 289 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 56/294 (19%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK-------------------- 84
           ED +LH    + L +G  G+++L     T   FA K++ K                    
Sbjct: 18  EDFELH----KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 85  -------------TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALH 130
                        T ++ E  +   E+ +GG L+  I    ++    A      ++  L 
Sbjct: 74  LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 131 ACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE----EVVGTPLYMA 186
             HS GI++RDLK +N +    D++  +K  DFG+    +E  + +    E  GTP Y+A
Sbjct: 134 FLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMC---KENMLGDAKTNEFCGTPDYIA 187
Query: 187 PELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-I 245
           PE+L   KY   +D WS G++LY +L G  PF     +G     +   I   +  +P  +
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-----HGQDEEELFHSIRMDNPFYPRWL 242
Query: 246 SSSAKDLIRRMLIRDPNNQITV-AQILKHPWLNYENGEAWDRP-IDTAIISRVK 297
              AKDL+ ++ +R+P  ++ V   I +HP     N E  +R  ID     +VK
Sbjct: 243 EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVK 296

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 118 YMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 175
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   +K  DFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 176 -DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 233 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 288
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 289 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R+ E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R+ E  A      +V      HS  +++RDLKPEN +   
Sbjct: 138 YMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 195
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 196 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 253 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 308
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 309 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 340

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   +K  DFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R+ E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   +K  DFG A   + G+ +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 9/172 (5%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDE 154
           E+ +GG L   +S    ++E  A      +V+AL   HS   +++RDLK EN +    D+
Sbjct: 90  EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DK 146
Query: 155 NATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
           +  +K TDFGL     ++G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ 
Sbjct: 147 DGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 206
Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           G  PF+ +        I+  EI F      T+   AK L+  +L +DP  ++
Sbjct: 207 GRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRL 254

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 9/172 (5%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDE 154
           E+ +GG L   +S    ++E  A      +V+AL   HS   +++RDLK EN +    D+
Sbjct: 89  EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DK 145
Query: 155 NATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
           +  +K TDFGL     ++G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ 
Sbjct: 146 DGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 205
Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           G  PF+ +        I+  EI F      T+   AK L+  +L +DP  ++
Sbjct: 206 GRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRL 253

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 9/172 (5%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDE 154
           E+ +GG L   +S    ++E  A      +V+AL   HS   +++RDLK EN +    D+
Sbjct: 88  EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DK 144
Query: 155 NATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
           +  +K TDFGL     ++G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ 
Sbjct: 145 DGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 204
Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           G  PF+ +        I+  EI F      T+   AK L+  +L +DP  ++
Sbjct: 205 GRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRL 252

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 9/172 (5%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDE 154
           E+ +GG L   +S    ++E  A      +V+AL   HS   +++RDLK EN +    D+
Sbjct: 228 EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DK 284
Query: 155 NATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
           +  +K TDFGL     ++G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ 
Sbjct: 285 DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 344
Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           G  PF+ +        I+  EI F      T+   AK L+  +L +DP  ++
Sbjct: 345 GRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRL 392

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 9/172 (5%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDE 154
           E+ +GG L   +S    ++E  A      +V+AL   HS   +++RDLK EN +    D+
Sbjct: 231 EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DK 287
Query: 155 NATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
           +  +K TDFGL     ++G   +   GTP Y+APE+L    YG+ +D W  G+++Y ++ 
Sbjct: 288 DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 347
Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           G  PF+ +        I+  EI F      T+   AK L+  +L +DP  ++
Sbjct: 348 GRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRL 395

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 138 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 195
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G  +  + GTP Y+APE++    Y K +D W+ G+++Y +
Sbjct: 196 -DQQGYIQVTDFGFAKRVK-GATWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 253 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 308
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 309 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 340

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 29  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 89  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 205
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQ- 258
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 259 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 28  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 88  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 204
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQ- 257
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 258 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 17/225 (7%)
Query: 92  YLKREHCDGGT--LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E+C  G   ++D + ++ R+    A   F  +++ L   HS GI+H+D+KP N + 
Sbjct: 84  YMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL 142
Query: 150 TTDDENATLKATDFGLA---FFFEEGKVYEEVVGTPLYMAPELLGPCK--YGKEIDIWSA 204
           TT     TLK +  G+A     F          G+P +  PE+        G ++DIWSA
Sbjct: 143 TT---GGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSA 199
Query: 205 GLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQ 264
           G+ LYN+ +G  PF  +++Y     I         D  P +S    DL++ ML  +P  +
Sbjct: 200 GVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS----DLLKGMLEYEPAKR 255
Query: 265 ITVAQILKHPWLNYENGEAWDRPIDTAIISRVK-QFRAMSKLKKL 308
            ++ QI +H W   ++  A + P+        K ++R+M+ +  L
Sbjct: 256 FSIRQIRQHSWFRKKHPPA-EAPVPIPPSPDTKDRWRSMTVVPYL 299

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 29  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 89  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 205
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQ- 258
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 259 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 92  YLKREHCDGGTLVDRIS----DRERYTERAAASVFRSVVNALHACH--SNG---IMHRDL 142
           Y+  E+C+GG L   I+    +R+   E     V   +  AL  CH  S+G   ++HRDL
Sbjct: 83  YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 143 KPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-VGTPLYMAPELLGPCKYGKEIDI 201
           KP N      D    +K  DFGLA        + +  VGTP YM+PE +    Y ++ DI
Sbjct: 143 KPANVFL---DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDI 199
Query: 202 WSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP 261
           WS G +LY L +   PF A S       I  RE  F+  P+   S    ++I RML    
Sbjct: 200 WSLGCLLYELCALMPPFTAFSQKELAGKI--REGKFRRIPY-RYSDELNEIITRMLNLKD 256
Query: 262 NNQITVAQILKHPWL 276
            ++ +V +IL++P +
Sbjct: 257 YHRPSVEEILENPLI 271

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 28  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 88  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 204
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQ- 257
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 258 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 92  YLKREHCDGGTLVDRIS----DRERYTERAAASVFRSVVNALHACH--SNG---IMHRDL 142
           Y+  E+C+GG L   I+    +R+   E     V   +  AL  CH  S+G   ++HRDL
Sbjct: 83  YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 143 KPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-VGTPLYMAPELLGPCKYGKEIDI 201
           KP N      D    +K  DFGLA        + +  VGTP YM+PE +    Y ++ DI
Sbjct: 143 KPANVFL---DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDI 199
Query: 202 WSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP 261
           WS G +LY L +   PF A S       I  RE  F+  P+   S    ++I RML    
Sbjct: 200 WSLGCLLYELCALMPPFTAFSQKELAGKI--REGKFRRIPY-RYSDELNEIITRMLNLKD 256
Query: 262 NNQITVAQILKHPWL 276
            ++ +V +IL++P +
Sbjct: 257 YHRPSVEEILENPLI 271

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 16  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 76  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 192
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQ- 245
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 246 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 15  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 75  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 191
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 192 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQ- 244
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 245 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 35  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 95  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 211
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 212 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQ- 264
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 265 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 43  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 219
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQ- 272
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 273 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 28  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 88  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 204
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQ- 257
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 258 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
           L D I++R    E  A S F  V+ A+  CH+ G++HRD+K EN +   D     LK  D
Sbjct: 97  LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLID 154
Query: 163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAE 221
           FG     ++  VY +  GT +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +
Sbjct: 155 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
Query: 222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                   I+  ++ F+      +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 214 E------EIIGGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP Y+AP ++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
           L D I++R    E  A S F  V+ A+  CH+ G++HRD+K EN +   D     LK  D
Sbjct: 101 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLID 158
Query: 163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAE 221
           FG     ++  VY +  GT +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +
Sbjct: 159 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
Query: 222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                   I+  ++ F+      +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 218 E------EIIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
           L D I++R    E  A S F  V+ A+  CH+ G++HRD+K EN +   D     LK  D
Sbjct: 100 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLID 157
Query: 163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAE 221
           FG     ++  VY +  GT +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +
Sbjct: 158 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 216
Query: 222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                   I+  ++ F+      +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 217 E------EIIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 262

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
           L D I++R    E  A S F  V+ A+  CH+ G++HRD+K EN +   D     LK  D
Sbjct: 101 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLID 158
Query: 163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAE 221
           FG     ++  VY +  GT +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +
Sbjct: 159 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
Query: 222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                   I+  ++ F+      +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 218 E------EIIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
           L D I++R    E  A S F  V+ A+  CH+ G++HRD+K EN +   D     LK  D
Sbjct: 102 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLID 159
Query: 163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAE 221
           FG     ++  VY +  GT +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +
Sbjct: 160 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
Query: 222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                   I+  ++ F+      +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 219 E------EIIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
           L D I++R    E  A S F  V+ A+  CH+ G++HRD+K EN +   D     LK  D
Sbjct: 102 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLID 159
Query: 163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAE 221
           FG     ++  VY +  GT +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +
Sbjct: 160 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
Query: 222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                   I+  ++ F+      +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 219 E------EIIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
           L D I++R    E  A S F  V+ A+  CH+ G++HRD+K EN +   D     LK  D
Sbjct: 97  LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLID 154
Query: 163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAE 221
           FG     ++  VY +  GT +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +
Sbjct: 155 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
Query: 222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                   I+  ++ F+      +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 214 E------EIIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
           L D I++R    E  A S F  V+ A+  CH+ G++HRD+K EN +   D     LK  D
Sbjct: 102 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLID 159
Query: 163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAE 221
           FG     ++  VY +  GT +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +
Sbjct: 160 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
Query: 222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                   I+  ++ F+      +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 219 E------EIIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
           L D I++R    E  A S F  V+ A+  CH+ G++HRD+K EN +   D     LK  D
Sbjct: 144 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLID 201
Query: 163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAE 221
           FG     ++  VY +  GT +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +
Sbjct: 202 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
Query: 222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                   I+  ++ F+      +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 261 E------EIIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 36/219 (16%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           +L  E+CD   L +    +    E    S+    + A++ CH +  +HRD+KPEN + T 
Sbjct: 78  HLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT- 136
Query: 152 DDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILY 209
             +++ +K  DFG A         Y++ V T  Y +PELL G  +YG  +D+W+ G +  
Sbjct: 137 --KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFA 194
Query: 210 NLLSGAQPFW-----AESLY---GTLTAIMSREIDFKS-----------DP--------- 241
            LLSG  P W      + LY    TL  ++ R     S           DP         
Sbjct: 195 ELLSGV-PLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELK 253
Query: 242 WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYEN 280
           +P IS  A  L++  L  DP  ++T  Q+L HP+  +EN
Sbjct: 254 FPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY--FEN 290

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 88.2 bits (217), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 100 TFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 159
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 160 PENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSD 216
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 272
Query: 261 PNNQI 265
              ++
Sbjct: 273 ATKRL 277

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 20/222 (9%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 97  TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 156
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 157 PENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSD 213
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 214 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 269
Query: 261 PNNQITVAQI-----LK-HPW---LNYENGEAWDRPIDTAII 293
              ++   ++     LK HP+   + +EN      P  TA +
Sbjct: 270 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLTAYL 311

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 28  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 88  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 204
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQ- 257
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +S   + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 258 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+  GG +   +    R++E  A      +V      HS  +++RDLKPEN +   
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-- 174
Query: 152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL 211
            D+   ++ TDFG A   + G+ +  + GTP  +APE++    Y K +D W+ G+++Y +
Sbjct: 175 -DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD-----PNNQIT 266
            +G  PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNG 287
Query: 267 VAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           V  I  H W    +  A + R ++   I + K
Sbjct: 288 VNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 29  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 89  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 205
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQ- 258
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +S   + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 259 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 52/288 (18%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISK-------------------------- 84
           F + + L +G  G+++L     T   FA K++ K                          
Sbjct: 19  FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 85  -------TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                  T ++ E  +   E+ +GG L+  I    ++    A      ++  L   HS G
Sbjct: 79  FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138
Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE----EVVGTPLYMAPELLGP 192
           I++RDLK +N +    D++  +K  DFG+    +E  + +       GTP Y+APE+L  
Sbjct: 139 IVYRDLKLDNILL---DKDGHIKIADFGMC---KENMLGDAKTNXFCGTPDYIAPEILLG 192
Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKD 251
            KY   +D WS G++LY +L G  PF     +G     +   I   +  +P  +   AKD
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSPF-----HGQDEEELFHSIRMDNPFYPRWLEKEAKD 247
Query: 252 LIRRMLIRDPNNQITV-AQILKHPWLNYENGEAWDRP-IDTAIISRVK 297
           L+ ++ +R+P  ++ V   I +HP     N E  +R  ID     +VK
Sbjct: 248 LLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVK 295

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 20/222 (9%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 97  TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 156
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 157 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 213
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 214 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 269
Query: 261 PNNQITVAQI-----LK-HPW---LNYENGEAWDRPIDTAII 293
              ++   ++     LK HP+   + +EN      P  TA +
Sbjct: 270 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLTAYL 311

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 29  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 89  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 205
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQ- 258
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +S   + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 259 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 16  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 76  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 192
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQ- 245
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +S   + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 246 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 48  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 107
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 108 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 224
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 225 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQ- 277
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +S   + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 278 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 311

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 15  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 75  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 191
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 192 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQ- 244
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +S   + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 245 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 14/176 (7%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
           L D I++R    E  A S F  V+ A+  CH+ G++HRD+K EN +   D     LK  D
Sbjct: 97  LFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENIL--IDLNRGELKLID 154
Query: 163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAE 221
           FG     ++  VY +  GT +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +
Sbjct: 155 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
Query: 222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                   I+  ++ F+      +S   + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 214 E------EIIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 14/189 (7%)
Query: 73  TGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHAC 132
            GL F+ ++      +D+ Y   ++ +GG L   +     + E  A      + +AL   
Sbjct: 102 VGLHFSFQT------ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYL 155
Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLG 191
           HS  I++RDLKPEN +    D    +  TDFGL     E         GTP Y+APE+L 
Sbjct: 156 HSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD 251
              Y + +D W  G +LY +L G  PF++ +       I+++ +  K    P I++SA+ 
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARH 268
Query: 252 LIRRMLIRD 260
           L+  +L +D
Sbjct: 269 LLEGLLQKD 277

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 43  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 219
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQ- 272
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +S   + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 273 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 82  TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 141
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 142 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 198
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 199 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 254
Query: 261 PNNQI 265
              ++
Sbjct: 255 ATKRL 259

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 159
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 160 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 272
Query: 261 PNNQI 265
              ++
Sbjct: 273 ATKRL 277

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 75  TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 134
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 135 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 191
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 192 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 247
Query: 261 PNNQI 265
              ++
Sbjct: 248 ATKRL 252

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 98  TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 157
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 158 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 214
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 215 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 270
Query: 261 PNNQI 265
              ++
Sbjct: 271 ATKRL 275

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 76  TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 135
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 136 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 192
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 193 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 248
Query: 261 PNNQI 265
              ++
Sbjct: 249 ATKRL 253

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 98  TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 157
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 158 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 214
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 215 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 270
Query: 261 PNNQI 265
              ++
Sbjct: 271 ATKRL 275

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 159
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 160 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 272
Query: 261 PNNQI 265
              ++
Sbjct: 273 ATKRL 277

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 103 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 162
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 163 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 219
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF +  +P     A+DL+ ++L+ D
Sbjct: 220 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFP----KARDLVEKLLVLD 275
Query: 261 PNNQI 265
              ++
Sbjct: 276 ATKRL 280

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 98  TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 157
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 158 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 214
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 215 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 270
Query: 261 PNNQI 265
              ++
Sbjct: 271 ATKRL 275

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 98  TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 157
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYEE--VVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 158 PENILL---NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSD 214
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 215 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 270
Query: 261 PNNQI 265
              ++
Sbjct: 271 ATKRL 275

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 77  TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 136
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 137 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 193
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 194 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 249
Query: 261 PNNQI 265
              ++
Sbjct: 250 ATKRL 254

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 14/176 (7%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
           L D I++R    E  A S F  V+ A+  CH+ G++HRD+K EN +   D     LK  D
Sbjct: 124 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLID 181
Query: 163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAE 221
           FG     ++  VY +  GT +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +
Sbjct: 182 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 240
Query: 222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                   I+  ++ F+      +S   + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 241 E------EIIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 286

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 160
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 161 PENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSD 217
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 218 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 273
Query: 261 PNNQI 265
              ++
Sbjct: 274 ATKRL 278

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 78  TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 137
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 138 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 194
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 195 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 250
Query: 261 PNNQI 265
              ++
Sbjct: 251 ATKRL 255

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 113/277 (40%), Gaps = 53/277 (19%)
Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR----- 95
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G L       
Sbjct: 16  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 96  -----------------------EHCDGGTLV-----------DRISDRERYTERAAASV 121
                                  E  D   L+           D I++R    E  A S 
Sbjct: 76  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++  VY +  GT
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGT 192
Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQ- 245
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +S   + LIR  L   P ++ T  +I  HPW+ 
Sbjct: 246 ---RVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQ 279

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 160
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 161 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 217
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 218 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 273
Query: 261 PNNQI 265
              ++
Sbjct: 274 ATKRL 278

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 159
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 160 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLD 272
Query: 261 PNNQI 265
              ++
Sbjct: 273 ATKRL 277

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y    +   G L+  I     + E         +V+AL   H  GI+HRDLKPEN +   
Sbjct: 113 YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL-- 170
Query: 152 DDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
            +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D+W+ G I+
Sbjct: 171 -NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 229
Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVA 268
           Y L++G  PF A + Y     I+  E DF    +P     A+DL+ ++L+ D   ++   
Sbjct: 230 YQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCE 285
Query: 269 QI 270
           ++
Sbjct: 286 EM 287

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 82  ISKTSKSDEGYLKREHCDGGTLVDRISDRER---YTERAAASVFRSVVNALHACHSNGIM 138
           + K + +D   L  E+C+GG L   ++  E      E    ++   + +AL   H N I+
Sbjct: 84  LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRII 143
Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           HRDLKPEN +     +    K  D G A   ++G++  E VGT  Y+APELL   KY   
Sbjct: 144 HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT 203
Query: 199 IDIWSAGLILYNLLSGAQPF 218
           +D WS G + +  ++G +PF
Sbjct: 204 VDYWSFGTLAFECITGFRPF 223

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 82  ISKTSKSDEGYLKREHCDGGTLVDRISDRER---YTERAAASVFRSVVNALHACHSNGIM 138
           + K + +D   L  E+C+GG L   ++  E      E    ++   + +AL   H N I+
Sbjct: 85  LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRII 144
Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           HRDLKPEN +     +    K  D G A   ++G++  E VGT  Y+APELL   KY   
Sbjct: 145 HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT 204
Query: 199 IDIWSAGLILYNLLSGAQPF 218
           +D WS G + +  ++G +PF
Sbjct: 205 VDYWSFGTLAFECITGFRPF 224

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 114/287 (39%), Gaps = 67/287 (23%)
Query: 55  EELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGY----------LKR-EHCDGGTL 103
           E++  G  G +Y   +N+ G  FA K I +  K DEG           LK  +H +   L
Sbjct: 8   EKIGEGTYGVVY-KAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 104 VDRISDRERYT----------------------ERAAASVFRSVVNALHACHSNGIMHRD 141
            D I  ++R                           A S    ++N +  CH   ++HRD
Sbjct: 66  YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 142 LKPENFIFTTDDENATLKATDFGL--AFFFEEGKVYEEVVGTPLYMAPE-LLGPCKYGKE 198
           LKP+N +   + E   LK  DFGL  AF     K   EVV T  Y AP+ L+G  KY   
Sbjct: 126 LKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTT 181
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK-------- 250
           IDIWS G I   +++GA  F   S    L  I        S  WP ++   K        
Sbjct: 182 IDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY 241
Query: 251 -----------------DLIRRMLIRDPNNQITVAQILKHPWLNYEN 280
                            DL+ +ML  DPN +IT  Q L+H +    N
Sbjct: 242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 86.3 bits (212), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 20/199 (10%)
Query: 88  SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF 147
            D  +   E  +GG L+  I    R+ E  A      +++AL   H  GI++RDLK +N 
Sbjct: 96  PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNV 155
Query: 148 IFTTDDENATLKATDFGLAFFFEEG----KVYEEVVGTPLYMAPELLGPCKYGKEIDIWS 203
           +    D     K  DFG+    +EG           GTP Y+APE+L    YG  +D W+
Sbjct: 156 LL---DHEGHCKLADFGMC---KEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWA 209
Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
            G++LY +L G  PF AE+      AI++ E+ + +  W  +   A  +++  + ++P  
Sbjct: 210 MGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LHEDATGILKSFMTKNPTM 265
Query: 264 QI-TVAQ-----ILKHPWL 276
           ++ ++ Q     IL+HP+ 
Sbjct: 266 RLGSLTQGGEHAILRHPFF 284

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 46/267 (17%)
Query: 51  FTIAEELCRGESGRIYLCTENSTG-------------LQFACKSISKTSKSDEGYLKR-- 95
           F + E+L  G  G +Y      TG             LQ   K IS   + D  ++ +  
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 96  -------------EHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRD 141
                        E+C  G++ D I  R +  TE   A++ +S +  L   H    +HRD
Sbjct: 91  GSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRD 150
Query: 142 LKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE-VVGTPLYMAPELLGPCKYGKEID 200
           +K  N +  T+      K  DFG+A    +       V+GTP +MAPE++    Y    D
Sbjct: 151 IKAGNILLNTE---GHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVAD 207
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI------SSSAKDLIR 254
           IWS G+    +  G  P+    ++      M       ++P PT       S +  D ++
Sbjct: 208 IWSLGITAIEMAEGKPPY--ADIHPMRAIFM-----IPTNPPPTFRKPELWSDNFTDFVK 260
Query: 255 RMLIRDPNNQITVAQILKHPWLNYENG 281
           + L++ P  + T  Q+L+HP++    G
Sbjct: 261 QCLVKSPEQRATATQLLQHPFVRSAKG 287

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 32/265 (12%)
Query: 46  DIKLHFTIAEELCRGESGR---IYLC----TENSTGLQF-ACKSISKTSKSDEG-----Y 92
           D++LH  +A ++ R +  R    YL      +N+  L   A  ++  T +++       Y
Sbjct: 33  DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPY 92
Query: 93  LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD 152
           +  E+ DG TL D +      T + A  V      AL+  H NGI+HRD+KP N + +  
Sbjct: 93  IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 153 DENATLKATDFGLA-FFFEEGKVYEE---VVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
           +    +K  DFG+A    + G    +   V+GT  Y++PE           D++S G +L
Sbjct: 153 N---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT------ISSSAKDLIRRMLIRDPN 262
           Y +L+G  PF  +S      ++  + +  + DP P       +S+    ++ + L ++P 
Sbjct: 210 YEVLTGEPPFTGDS----PVSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNPE 263
Query: 263 NQITVAQILKHPWLNYENGEAWDRP 287
           N+   A  ++   +   NGE  + P
Sbjct: 264 NRYQTAAEMRADLVRVHNGEPPEAP 288

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 32/265 (12%)
Query: 46  DIKLHFTIAEELCRGESGR---IYLC----TENSTGLQF-ACKSISKTSKSDEG-----Y 92
           D++LH  +A ++ R +  R    YL      +N+  L   A  ++  T +++       Y
Sbjct: 33  DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92
Query: 93  LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD 152
           +  E+ DG TL D +      T + A  V      AL+  H NGI+HRD+KP N + +  
Sbjct: 93  IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 153 DENATLKATDFGLA-FFFEEGKVYEE---VVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
           +    +K  DFG+A    + G    +   V+GT  Y++PE           D++S G +L
Sbjct: 153 N---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT------ISSSAKDLIRRMLIRDPN 262
           Y +L+G  PF  +S      ++  + +  + DP P       +S+    ++ + L ++P 
Sbjct: 210 YEVLTGEPPFTGDS----PVSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNPE 263
Query: 263 NQITVAQILKHPWLNYENGEAWDRP 287
           N+   A  ++   +   NGE  + P
Sbjct: 264 NRYQTAAEMRADLVRVHNGEPPEAP 288

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 113/287 (39%), Gaps = 67/287 (23%)
Query: 55  EELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGY----------LKR-EHCDGGTL 103
           E++  G  G +Y   +N+ G  FA K I +  K DEG           LK  +H +   L
Sbjct: 8   EKIGEGTYGVVY-KAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 104 VDRISDRERYT----------------------ERAAASVFRSVVNALHACHSNGIMHRD 141
            D I  ++R                           A S    ++N +  CH   ++HRD
Sbjct: 66  YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 142 LKPENFIFTTDDENATLKATDFGL--AFFFEEGKVYEEVVGTPLYMAPE-LLGPCKYGKE 198
           LKP+N +   + E   LK  DFGL  AF     K   EVV T  Y AP+ L+G  KY   
Sbjct: 126 LKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTT 181
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK-------- 250
           IDIWS G I   +++G   F   S    L  I        S  WP ++   K        
Sbjct: 182 IDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY 241
Query: 251 -----------------DLIRRMLIRDPNNQITVAQILKHPWLNYEN 280
                            DL+ +ML  DPN +IT  Q L+H +    N
Sbjct: 242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 38/217 (17%)
Query: 89  DEGYLKREHCDGGTLVDRI----SDRERYT----ERAAASVFRSVVNALHACHSNGIMHR 140
           DE +L  +   GG+++D I    +  E  +    E   A++ R V+  L   H NG +HR
Sbjct: 86  DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHR 145
Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEEG------KVYEEVVGTPLYMAPELLGPCK 194
           D+K  N +     E+ +++  DFG++ F   G      KV +  VGTP +MAPE++   +
Sbjct: 146 DVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 202
Query: 195 -YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD-- 251
            Y  + DIWS G+    L +GA P+     Y  +  +M   +  ++DP P++ +  +D  
Sbjct: 203 GYDFKADIWSFGITAIELATGAAPYHK---YPPMKVLM---LTLQNDP-PSLETGVQDKE 255
Query: 252 -----------LIRRMLIRDPNNQITVAQILKHPWLN 277
                      +I   L +DP  + T A++L+H +  
Sbjct: 256 MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D  Y   E+ +GG L+  I    ++ E  A      +   L   H  GI++RDLK +N +
Sbjct: 93  DRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVM 152
Query: 149 FTTDDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
               D    +K  DFG+      +G    E  GTP Y+APE++    YGK +D W+ G++
Sbjct: 153 L---DSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVL 209
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           LY +L+G  PF  E       +IM   + +      ++S  A  + + ++ + P  ++
Sbjct: 210 LYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHPAKRL 263

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 113/287 (39%), Gaps = 67/287 (23%)
Query: 55  EELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGY----------LKR-EHCDGGTL 103
           E++  G  G +Y   +N+ G  FA K I +  K DEG           LK  +H +   L
Sbjct: 8   EKIGEGTYGVVY-KAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 104 VDRISDRERYT----------------------ERAAASVFRSVVNALHACHSNGIMHRD 141
            D I  ++R                           A S    ++N +  CH   ++HRD
Sbjct: 66  YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 142 LKPENFIFTTDDENATLKATDFGL--AFFFEEGKVYEEVVGTPLYMAPE-LLGPCKYGKE 198
           LKP+N +   + E   LK  DFGL  AF     K   E+V T  Y AP+ L+G  KY   
Sbjct: 126 LKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTT 181
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK-------- 250
           IDIWS G I   +++G   F   S    L  I        S  WP ++   K        
Sbjct: 182 IDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY 241
Query: 251 -----------------DLIRRMLIRDPNNQITVAQILKHPWLNYEN 280
                            DL+ +ML  DPN +IT  Q L+H +    N
Sbjct: 242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 34/186 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTP 182
            ++N +  CHS+ I+HRD+KPEN + +   ++  +K  DFG A      G+VY++ V T 
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFARTLAAPGEVYDDEVATR 188
Query: 183 LYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM---------S 232
            Y APELL G  KYGK +D+W+ G ++  +  G   F  +S    L  IM          
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH 248
Query: 233 REIDFKSDP-------------------WPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
           +E+ F  +P                   +P +S    DL ++ L  DP+ +   A++L H
Sbjct: 249 QEL-FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307
Query: 274 PWLNYE 279
            +   +
Sbjct: 308 DFFQMD 313

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 38/213 (17%)
Query: 89  DEGYLKREHCDGGTLVDRI----SDRERYT----ERAAASVFRSVVNALHACHSNGIMHR 140
           DE +L  +   GG+++D I    +  E  +    E   A++ R V+  L   H NG +HR
Sbjct: 81  DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHR 140
Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEEG------KVYEEVVGTPLYMAPELLGPCK 194
           D+K  N +     E+ +++  DFG++ F   G      KV +  VGTP +MAPE++   +
Sbjct: 141 DVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 197
Query: 195 -YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD-- 251
            Y  + DIWS G+    L +GA P+     Y  +  +M   +  ++DP P++ +  +D  
Sbjct: 198 GYDFKADIWSFGITAIELATGAAPYHK---YPPMKVLM---LTLQNDP-PSLETGVQDKE 250
Query: 252 -----------LIRRMLIRDPNNQITVAQILKH 273
                      +I   L +DP  + T A++L+H
Sbjct: 251 MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 283

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 88/185 (47%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 159
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 160 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSD 216
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A +       I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARDLVEKLLVLD 272
Query: 261 PNNQI 265
              ++
Sbjct: 273 ATKRL 277

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D  Y   E+ +GG L+  I    R+ E  A      +   L    S GI++RDLK +N +
Sbjct: 94  DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM 153
Query: 149 FTTDDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
               D    +K  DFG+      +G   +   GTP Y+APE++    YGK +D W+ G++
Sbjct: 154 L---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 210
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           LY +L+G  PF  E       +IM   + +      ++S  A  + + ++ + P  ++  
Sbjct: 211 LYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGC 266
Query: 268 A-----QILKHPWLNYENGEAWDR 286
                  I +H +  Y + E  +R
Sbjct: 267 GPEGERDIKEHAFFRYIDWEKLER 290

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 88/185 (47%), Gaps = 11/185 (5%)
Query: 85  TSKSDEG-YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
           T + DE  Y    +   G L+  I     + E         +V+AL   H  GI+HRDLK
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 159
Query: 144 PENFIFTTDDENATLKATDFGLA-FFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEID 200
           PEN +    +E+  ++ TDFG A     E K       VGT  Y++PELL      K  D
Sbjct: 160 PENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G I+Y L++G  PF A +       I+  E DF    +P     A+DL+ ++L+ D
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARDLVEKLLVLD 272
Query: 261 PNNQI 265
              ++
Sbjct: 273 ATKRL 277

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+ DG TL D +      T + A  V      AL+  H NGI+HRD+KP N + + 
Sbjct: 92  YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 152 DDENATLKATDFGLA-FFFEEGKVYEE---VVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            +    +K  DFG+A    + G    +   V+GT  Y++PE           D++S G +
Sbjct: 152 TN---AVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT------ISSSAKDLIRRMLIRDP 261
           LY +L+G  PF  +S      ++  + +  + DP P       +S+    ++ + L ++P
Sbjct: 209 LYEVLTGEPPFTGDS----PVSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNP 262
Query: 262 NNQITVAQILKHPWLNYENGEAWDRP 287
            N+   A  ++   +   NGE  + P
Sbjct: 263 ENRYQTAAEMRADLVRVHNGEPPEAP 288

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 89  DEGYLK---REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPE 145
           ++G+ +    +H  G  L   I    R  E  A+ +FR +V+A+       I+HRD+K E
Sbjct: 100 NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDE 159
Query: 146 NFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSA 204
           N +     E+ T+K  DFG A + E GK++    GT  Y APE+L    Y G E+++WS 
Sbjct: 160 NIVIA---EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSL 216
Query: 205 GLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQ 264
           G+ LY L+    PF            +   ++    P   +S     L+  +L   P  +
Sbjct: 217 GVTLYTLVFEENPFCE----------LEETVEAAIHPPYLVSKELMSLVSGLLQPVPERR 266
Query: 265 ITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRA 301
            T+ +++  PW+         +P++ A  +  + FR 
Sbjct: 267 TTLEKLVTDPWVT--------QPVNLADYTWEEVFRV 295

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           D  Y   E+ +GG L+  I    R+ E  A      +   L    S GI++RDLK +N +
Sbjct: 415 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM 474
Query: 149 FTTDDENATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
               D    +K  DFG+      +G   +   GTP Y+APE++    YGK +D W+ G++
Sbjct: 475 L---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 531
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           LY +L+G  PF  E       +IM   + +      ++S  A  + + ++ + P  ++  
Sbjct: 532 LYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGC 587
Query: 268 A-----QILKHPWLNYENGEAWDR 286
                  I +H +  Y + E  +R
Sbjct: 588 GPEGERDIKEHAFFRYIDWEKLER 611

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 32/265 (12%)
Query: 46  DIKLHFTIAEELCRGESGR---IYLC----TENSTGLQF-ACKSISKTSKSDEG-----Y 92
           D++ H  +A ++ R +  R    YL      +N+  L   A  ++  T +++       Y
Sbjct: 33  DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92
Query: 93  LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD 152
           +  E+ DG TL D +      T + A  V      AL+  H NGI+HRD+KP N + +  
Sbjct: 93  IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 153 DENATLKATDFGLA-FFFEEGKVYEE---VVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
           +    +K  DFG+A    + G    +   V+GT  Y++PE           D++S G +L
Sbjct: 153 N---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT------ISSSAKDLIRRMLIRDPN 262
           Y +L+G  PF  +S      ++  + +  + DP P       +S+    ++ + L ++P 
Sbjct: 210 YEVLTGEPPFTGDS----PVSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNPE 263
Query: 263 NQITVAQILKHPWLNYENGEAWDRP 287
           N+   A  ++   +   NGE  + P
Sbjct: 264 NRYQTAAEMRADLVRVHNGEPPEAP 288

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 79  CKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAA-SVFRSVVNALHACHSNGI 137
            K ++   K    +++ E+C+ GTL D I       +R     +FR ++ AL   HS GI
Sbjct: 78  VKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGI 137
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEE---------------GKVYEEVVGTP 182
           +HRDLKP N      DE+  +K  DFGLA                           +GT 
Sbjct: 138 IHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA 194
Query: 183 LYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPF-WAESLYGTLTAIMSREIDFKSD 240
           +Y+A E+L G   Y ++ID++S G+I + ++    PF         L  + S  I+F  D
Sbjct: 195 MYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKLRSVSIEFPPD 251
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                    K +IR ++  DPN +     +L   WL
Sbjct: 252 FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---VYE 176
           S +++++ A+H  H +GI+H DLKP NF+      +  LK  DFG+A   +      V +
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 214
Query: 177 EVVGTPLYMAPELLGPCKYGKE-----------IDIWSAGLILYNLLSGAQPFWA-ESLY 224
             VGT  YM PE +      +E            D+WS G ILY +  G  PF    +  
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 225 GTLTAIM--SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE 279
             L AI+  + EI+F   P        +D+++  L RDP  +I++ ++L HP++  +
Sbjct: 275 SKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 327

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 32/259 (12%)
Query: 46  DIKLHFTIAEELCRGESGR---IYLC----TENSTGLQF-ACKSISKTSKSDEG-----Y 92
           D++LH  +A ++ R +  R    YL      +N+  L   A  ++  T +++       Y
Sbjct: 50  DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 109
Query: 93  LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD 152
           +  E+ DG TL D +      T + A  V      AL+  H NGI+HRD+KP N + +  
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 169
Query: 153 DENATLKATDFGLA-FFFEEGKVYEE---VVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
           +    +K  DFG+A    + G    +   V+GT  Y++PE           D++S G +L
Sbjct: 170 N---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 226
Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT------ISSSAKDLIRRMLIRDPN 262
           Y +L+G  PF  +S      ++  + +  + DP P       +S+    ++ + L ++P 
Sbjct: 227 YEVLTGEPPFTGDS----PVSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNPE 280
Query: 263 NQITVAQILKHPWLNYENG 281
           N+   A  ++   +   NG
Sbjct: 281 NRYQTAAEMRADLVRVHNG 299

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---VYE 176
           S +++++ A+H  H +GI+H DLKP NF+      +  LK  DFG+A   +      V +
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 214
Query: 177 EVVGTPLYMAPELLGPCKYGKE-----------IDIWSAGLILYNLLSGAQPFWA-ESLY 224
             VGT  YM PE +      +E            D+WS G ILY +  G  PF    +  
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 225 GTLTAIM--SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE 279
             L AI+  + EI+F   P        +D+++  L RDP  +I++ ++L HP++  +
Sbjct: 275 SKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 327

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+ DG TL D +      T + A  V      AL+  H NGI+HRD+KP N + + 
Sbjct: 92  YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 152 DDENATLKATDFGLA-FFFEEGKVYEE---VVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            +    +K  DFG+A    + G    +   V+GT  Y++PE           D++S G +
Sbjct: 152 TN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT------ISSSAKDLIRRMLIRDP 261
           LY +L+G  PF  +S      ++  + +  + DP P       +S+    ++ + L ++P
Sbjct: 209 LYEVLTGEPPFTGDS----PDSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNP 262
Query: 262 NNQITVAQILKHPWLNYENGEAWDRP 287
            N+   A  ++   +   NGE  + P
Sbjct: 263 ENRYQTAAEMRADLVRVHNGEPPEAP 288

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 81.6 bits (200), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE---GKVYE 176
           S +++++ A+H  H +GI+H DLKP NF+      +  LK  DFG+A   +      V +
Sbjct: 112 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 167
Query: 177 EVVGTPLYMAPELLGPCKYGKE-----------IDIWSAGLILYNLLSGAQPFWA-ESLY 224
             VGT  YM PE +      +E            D+WS G ILY +  G  PF    +  
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 227
Query: 225 GTLTAIM--SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
             L AI+  + EI+F   P        +D+++  L RDP  +I++ ++L HP++
Sbjct: 228 SKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 81.6 bits (200), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---VYE 176
           S +++++ A+H  H +GI+H DLKP NF+      +  LK  DFG+A   +      V +
Sbjct: 131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 186
Query: 177 EVVGTPLYMAPELLGPCKYGKE-----------IDIWSAGLILYNLLSGAQPFWA-ESLY 224
             VGT  YM PE +      +E            D+WS G ILY +  G  PF    +  
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 225 GTLTAIM--SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE 279
             L AI+  + EI+F   P        +D+++  L RDP  +I++ ++L HP++  +
Sbjct: 247 SKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 299

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---VYE 176
           S +++++ A+H  H +GI+H DLKP NF+      +  LK  DFG+A   +      V +
Sbjct: 131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKD 186
Query: 177 EVVGTPLYMAPELLGPCKYGKE-----------IDIWSAGLILYNLLSGAQPFWA-ESLY 224
             VGT  YM PE +      +E            D+WS G ILY +  G  PF    +  
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 225 GTLTAIM--SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
             L AI+  + EI+F   P        +D+++  L RDP  +I++ ++L HP++
Sbjct: 247 SKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE---GKVYE 176
           S +++++ A+H  H +GI+H DLKP NF+      +  LK  DFG+A   +      V +
Sbjct: 111 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 166
Query: 177 EVVGTPLYMAPELLGPCKYGKE-----------IDIWSAGLILYNLLSGAQPFWA-ESLY 224
             VGT  YM PE +      +E            D+WS G ILY +  G  PF    +  
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 226
Query: 225 GTLTAIM--SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE 279
             L AI+  + EI+F   P        +D+++  L RDP  +I++ ++L HP++  +
Sbjct: 227 SKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 279

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE---GKVYE 176
           S +++++ A+H  H +GI+H DLKP NF+      +  LK  DFG+A   +      V +
Sbjct: 115 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 170
Query: 177 EVVGTPLYMAPELLGPCKYGKE-----------IDIWSAGLILYNLLSGAQPFWA-ESLY 224
             VGT  YM PE +      +E            D+WS G ILY +  G  PF    +  
Sbjct: 171 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 230
Query: 225 GTLTAIM--SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE 279
             L AI+  + EI+F   P        +D+++  L RDP  +I++ ++L HP++  +
Sbjct: 231 SKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 283

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 31/186 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEV 178
           S    ++  L  CHS  ++HRDLKP+N +    + N  LK  DFGLA  F    + Y   
Sbjct: 105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVRCYSAE 161
Query: 179 VGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAES-----------LYGT 226
           V T  Y  P++L G   Y   ID+WSAG I   L + A+P +  +           L GT
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGT 221
Query: 227 LT----AIMSREIDFKSDPW-----------PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
            T      M++  D+K  P            P ++++ +DL++ +L  +P  +I+  + L
Sbjct: 222 PTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281
Query: 272 KHPWLN 277
           +HP+ +
Sbjct: 282 QHPYFS 287

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 17/196 (8%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDDE 154
           EH DGG+L   +    R  E+    V  +V+  L +    + IMHRD+KP N +  +  E
Sbjct: 87  EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 146
Query: 155 NATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
              +K  DFG++    + ++  E VGT  YM+PE L    Y  + DIWS GL L  +  G
Sbjct: 147 ---IKLCDFGVSGQLID-EMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA-----KDLIRRMLIRDPNNQITVAQ 269
             P    +++  L  I+       ++P P + S+      +D + + LI++P  +  + Q
Sbjct: 203 RYPRPPMAIFELLDYIV-------NEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQ 255
Query: 270 ILKHPWLNYENGEAWD 285
           ++ H ++   + E  D
Sbjct: 256 LMVHAFIKRSDAEEVD 271

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 92  YLKREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF 149
           Y+  ++C+GG L  RI+ ++   + E      F  +  AL   H   I+HRD+K +N   
Sbjct: 99  YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL 158
Query: 150 TTDDENATLKATDFGLAFFFEEG-KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
           T D    T++  DFG+A       ++    +GTP Y++PE+     Y  + DIW+ G +L
Sbjct: 159 TKD---GTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVL 215
Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----SSSAKDLIRRMLIRDPNNQ 264
           Y L +    F A S+   +  I+       S  +P +    S   + L+ ++  R+P ++
Sbjct: 216 YELCTLKHAFEAGSMKNLVLKII-------SGSFPPVSLHYSYDLRSLVSQLFKRNPRDR 268
Query: 265 ITVAQILKHPWL 276
            +V  IL+  ++
Sbjct: 269 PSVNSILEKGFI 280

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 109/256 (42%), Gaps = 53/256 (20%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 272 KHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQK--HKETF 329
            HP+L     E +  P D  I     +F            + +++LP E++++   +ET 
Sbjct: 309 AHPYL-----EQYYDPSDEPIAEAPFKF-----------DMELDDLPKEKLKELIFEETA 352
Query: 330 KQMDTNDSGTLTYDEF 345
           +      SG L  DE 
Sbjct: 353 RFQPGYRSGDLGSDEL 368

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 25/177 (14%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---VYE 176
           S +++++ A+H  H +GI+H DLKP NF+      +  LK  DFG+A   +      V +
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 214
Query: 177 EVVGTPLYMAPELLGPCKYGKE-----------IDIWSAGLILYNLLSGAQPFWA-ESLY 224
             VG   YM PE +      +E            D+WS G ILY +  G  PF    +  
Sbjct: 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 225 GTLTAIM--SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE 279
             L AI+  + EI+F   P        +D+++  L RDP  +I++ ++L HP++  +
Sbjct: 275 SKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 327

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 309 AHPYLE-QYYDPSDEPIAEA 327

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 251 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 311 AHPYLE-QYYDPSDEPIAEA 329

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 313 AHPYLE-QYYDPSDEPIAEA 331

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 254 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 314 AHPYLE-QYYDPSDEPIAEA 332

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 138 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 254
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 255 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 314
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 315 AHPYLE-QYYDPSDEPIAEA 333

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 129 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 245
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 246 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 305
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 306 AHPYLE-QYYDPSDEPIAEA 324

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 313 AHPYLE-QYYDPSDEPIAEA 331

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 313 AHPYLE-QYYDPSDEPIAEA 331

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T  +   LK  DFGLA       +      E V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 249 QEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 309 AHPYLE-QYYDPSDEPIAEA 327

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 254 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 314 AHPYLE-QYYDPSDEPIAEA 332

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T  +   LK  DFGLA       +      E V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYV 188
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 309 AHPYLE-QYYDPSDEPIAEA 327

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 140 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 256
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 257 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 316
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 317 AHPYLE-QYYDPSDEPIAEA 335

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T  +   LK  DFGLA       +      E V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYV 192
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 313 AHPYLE-QYYDPSDEPIAEA 331

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T    + LK  DFGLA       +      E V
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNT---TSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 251 QEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 311 AHPYLA-QYYDPSDEPIAEA 329

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T  +   LK  DFGLA       +      E V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYV 188
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 249 QEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 309 AHPYLE-QYYDPSDEPIAEA 327

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 313 AHPYLE-QYYDPSDEPIAEA 331

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Query: 83  SKTSKSDEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHR 140
           S  SK+   +++ E CD GTL   I  R  E+  +  A  +F  +   +   HS  ++HR
Sbjct: 101 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHR 160
Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEID 200
           DLKP N IF  D     +K  DFGL    +         GT  YM+PE +    YGKE+D
Sbjct: 161 DLKPSN-IFLVD--TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVD 217
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGT--LTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
           +++ GLIL  LL      +  S + T     I+S   D K           K L++++L 
Sbjct: 218 LYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKE----------KTLLQKLLS 267
Query: 259 RDPNNQITVAQILK 272
           + P ++   ++IL+
Sbjct: 268 KKPEDRPNTSEILR 281

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 269 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 328
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 329 AHPYLE-QYYDPSDEPIAEA 347

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 246
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 307 AHPYLE-QYYDPSDEPIAEA 325

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T  +   LK  DFGLA       +      E V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYV 192
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 313 AHPYLE-QYYDPSDEPIAEA 331

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +V   H  HS GI+HRDLKP N +  +D   ATLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLVGIKH-LHSAGIIHRDLKPSNIVVKSD---ATLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGA------------------- 215
               V T  Y APE++    Y + +DIWS G+I+  ++ G                    
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 216 ---QPFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T  +   LK  DFGLA       +      E V
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYV 208
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 269 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 328
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 329 AHPYLE-QYYDPSDEPIAEA 347

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +V   H  HS GI+HRDLKP N +  +D   ATLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLVGIKH-LHSAGIIHRDLKPSNIVVKSD---ATLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGA------------------- 215
               V T  Y APE++    Y + +DIWS G+I+  ++ G                    
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 216 ---QPFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 233 RE-----IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 251 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 311 AHPYLA-QYYDPSDEPIAEA 329

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 14/176 (7%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD 162
           L D I+++    E  +   F  VV A+  CHS G++HRD+K EN +   D      K  D
Sbjct: 126 LFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI--DLRRGCAKLID 183
Query: 163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAE 221
           FG      + + Y +  GT +Y  PE +   +Y      +WS G++LY+++ G  PF  +
Sbjct: 184 FGSGALLHD-EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD 242
Query: 222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                   I+  E+ F +     +S     LIRR L   P+++ ++ +IL  PW+ 
Sbjct: 243 Q------EILEAELHFPAH----VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ 288

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLINT---TCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------S 232
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+      S
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 233 RE-----IDFKSDPW----------------PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +E     I+ K+  +                P   S A DL+ RML  +PN +ITV + L
Sbjct: 269 QEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEAL 328
Query: 272 KHPWL 276
            HP+L
Sbjct: 329 AHPYL 333

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 79  CKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAA-SVFRSVVNALHACHSNGI 137
            K ++   K    +++ E+C+  TL D I       +R     +FR ++ AL   HS GI
Sbjct: 78  VKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGI 137
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEE---------------GKVYEEVVGTP 182
           +HRDLKP N      DE+  +K  DFGLA                           +GT 
Sbjct: 138 IHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA 194
Query: 183 LYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPF-WAESLYGTLTAIMSREIDFKSD 240
           +Y+A E+L G   Y ++ID++S G+I + ++    PF         L  + S  I+F  D
Sbjct: 195 MYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKLRSVSIEFPPD 251
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                    K +IR ++  DPN +     +L   WL
Sbjct: 252 FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 124 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTASTNFM 179
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR- 233
               V T  Y APE++    Y + +DIWS G I+  L+ G+  F           ++ + 
Sbjct: 180 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQL 239
Query: 234 ---EIDFKSDPWPTI----------------------------------SSSAKDLIRRM 256
                +F +   PT+                                  +S A+DL+ +M
Sbjct: 240 GTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKM 299
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP+ +I+V + L+HP++   Y+  EA   P
Sbjct: 300 LVIDPDKRISVDEALRHPYITVWYDPAEAEAPP 332

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 87/200 (43%), Gaps = 36/200 (18%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF----FEEGKVYEEVV 179
            ++  L   HS  ++HRDLKP N +  T      LK  DFGLA       +      E V
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 180 GTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM----SRE 234
            T  Y APE++   K Y K IDIWS G IL  +LS    F  +     L  I+    S E
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPE 246
Query: 235 -------IDFKSD------------PW----PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
                  I+ K+             PW    P   S A DL+ +ML  +P+ +I V Q L
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 272 KHPWLNYENGEAWDRPIDTA 291
            HP+L  +  +  D PI  A
Sbjct: 307 AHPYLE-QYYDPSDEPIAEA 325

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDDE 154
           EH DGG+L   +    R  E+    V  +V+  L +    + IMHRD+KP N +  +  E
Sbjct: 103 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 162
Query: 155 NATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
              +K  DFG++     G++ + +    VGT  YM+PE L    Y  + DIWS GL L  
Sbjct: 163 ---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 214
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA-----KDLIRRMLIRDPNNQI 265
           +  G  P  + S  G++ AI        ++P P + S       +D + + LI++P  + 
Sbjct: 215 MAVGRYPIGSGS--GSM-AIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERA 271
Query: 266 TVAQILKHPWLNYENGEAWD 285
            + Q++ H ++   + E  D
Sbjct: 272 DLKQLMVHAFIKRSDAEEVD 291

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +V   H  HS GI+HRDLKP N +  +D   ATLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLVGIKH-LHSAGIIHRDLKPSNIVVKSD---ATLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGA------------------- 215
               V T  Y APE++    Y + +DIWS G I+  ++ G                    
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 216 ---QPFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGK 173
           ER     F  + +AL   HS  +MHRD+KP N   T       +K  D GL  FF  +  
Sbjct: 135 ERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA---TGVVKLGDLGLGRFFSSKTT 191
Query: 174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE--SLYGTLTAIM 231
               +VGTP YM+PE +    Y  + DIWS G +LY + +   PF+ +  +LY     I 
Sbjct: 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI- 250
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
             + D+   P    S   + L+   +  DP  +  V  +
Sbjct: 251 -EQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 31/186 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEV 178
           S    ++  L  CHS  ++HRDLKP+N +    + N  LK  +FGLA  F    + Y   
Sbjct: 105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRCYSAE 161
Query: 179 VGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAES-----------LYGT 226
           V T  Y  P++L G   Y   ID+WSAG I   L +  +P +  +           L GT
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221
Query: 227 LT----AIMSREIDFKSDPW-----------PTISSSAKDLIRRMLIRDPNNQITVAQIL 271
            T      M++  D+K  P            P ++++ +DL++ +L  +P  +I+  + L
Sbjct: 222 PTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281
Query: 272 KHPWLN 277
           +HP+ +
Sbjct: 282 QHPYFS 287

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG 180
           +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G+     + 
Sbjct: 165 LFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXIC 218
Query: 181 TPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS 239
           +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+        
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK------- 271
Query: 240 DPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQ 298
                + +  ++ IR M   +PN  +    QI  HPW           P   A+ SR+ +
Sbjct: 272 ----VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAIALCSRLLE 322
Query: 299 FRAMSKLKKL 308
           +   ++L  L
Sbjct: 323 YTPTARLTPL 332

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTP 182
            ++  +  CH + I+HRDLKP+N +  +D     LK  DFGLA  F    + Y   V T 
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSD---GALKLADFGLARAFGIPVRSYTHEVVTL 183
Query: 183 LYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA-------ESLYGTLTAIMSRE 234
            Y AP+ L+G  KY   +DIWS G I   +++G   F           ++  L     RE
Sbjct: 184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPRE 243
Query: 235 ID---------------FKSDPW----PTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
                            F+  PW    P       DL+  ML  DPN +I+    + HP+
Sbjct: 244 WPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
Query: 276 L 276
Sbjct: 304 F 304

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTP 182
            ++  +  CH + I+HRDLKP+N +  +D     LK  DFGLA  F    + Y   V T 
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSD---GALKLADFGLARAFGIPVRSYTHEVVTL 183
Query: 183 LYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA-------ESLYGTLTAIMSRE 234
            Y AP+ L+G  KY   +DIWS G I   +++G   F           ++  L     RE
Sbjct: 184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPRE 243
Query: 235 ID---------------FKSDPW----PTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
                            F+  PW    P       DL+  ML  DPN +I+    + HP+
Sbjct: 244 WPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
Query: 276 L 276
Sbjct: 304 F 304

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG 180
           +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G+     + 
Sbjct: 159 LFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYIC 212
Query: 181 TPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS 239
           +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+        
Sbjct: 213 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK------- 265
Query: 240 DPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQ 298
                + +  ++ IR M   +PN  +    QI  HPW           P   A+ SR+ +
Sbjct: 266 ----VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAIALCSRLLE 316
Query: 299 FRAMSKLKKL 308
           +   ++L  L
Sbjct: 317 YTPTARLTPL 326

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 124 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 177
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 178 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 237
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 238 K-----------VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAI 281
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 282 ALCSRLLEYTPTARLTPL 299

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 123 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 176
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 237 K-----------VLGTPTREQIREM---NPNYTEFAFPQIKAHPWTKVFRPRT--PPEAI 280
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 281 ALCSRLLEYTPTARLTPL 298

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 142 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 195
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 196 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 255
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 256 K-----------VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAI 299
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 300 ALCSRLLEYTPTARLTPL 317

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 123 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 176
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 237 K-----------VLGTPTREQIREM---NPNYTEFAFPQIKAHPWTKVFRPRT--PPEAI 280
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 281 ALCSRLLEYTPTARLTPL 298

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG 180
           +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G+     + 
Sbjct: 165 LFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYIC 218
Query: 181 TPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS 239
           +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+        
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK------- 271
Query: 240 DPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQ 298
                + +  ++ IR M   +PN  +    QI  HPW           P   A+ SR+ +
Sbjct: 272 ----VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAIALCSRLLE 322
Query: 299 FRAMSKLKKL 308
           +   ++L  L
Sbjct: 323 YTPTARLTPL 332

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 135 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 188
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 189 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 248
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 249 K-----------VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAI 292
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 293 ALCSRLLEYTPTARLTPL 310

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 123 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 176
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 237 K-----------VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAI 280
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 281 ALCSRLLEYTPTARLTPL 298

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG 180
           +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G+     + 
Sbjct: 169 LFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYIC 222
Query: 181 TPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS 239
           +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+        
Sbjct: 223 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK------- 275
Query: 240 DPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQ 298
                + +  ++ IR M   +PN  +    QI  HPW           P   A+ SR+ +
Sbjct: 276 ----VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAIALCSRLLE 326
Query: 299 FRAMSKLKKL 308
           +   ++L  L
Sbjct: 327 YTPTARLTPL 336

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 123 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 176
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 237 K-----------VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAI 280
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 281 ALCSRLLEYTPTARLTPL 298

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 131 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 184
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 185 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 244
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 245 K-----------VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAI 288
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 289 ALCSRLLEYTPTARLTPL 306

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 123 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 176
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 237 K-----------VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAI 280
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 281 ALCSRLLEYTPTARLTPL 298

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 135 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 188
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 189 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 248
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 249 K-----------VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAI 292
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 293 ALCSRLLEYTPTARLTPL 310

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG 180
           +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G+     + 
Sbjct: 167 LFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYIC 220
Query: 181 TPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS 239
           +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+        
Sbjct: 221 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK------- 273
Query: 240 DPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQ 298
                + +  ++ IR M   +PN  +    QI  HPW           P   A+ SR+ +
Sbjct: 274 ----VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAIALCSRLLE 324
Query: 299 FRAMSKLKKL 308
           +   ++L  L
Sbjct: 325 YTPTARLTPL 334

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 127 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 180
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 181 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 240
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 241 K-----------VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAI 284
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 285 ALCSRLLEYTPTARLTPL 302

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG 180
           +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G+     + 
Sbjct: 136 LFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYIC 189
Query: 181 TPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS 239
           +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+        
Sbjct: 190 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK------- 242
Query: 240 DPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQ 298
                + +  ++ IR M   +PN  +    QI  HPW           P   A+ SR+ +
Sbjct: 243 ----VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAIALCSRLLE 293
Query: 299 FRAMSKLKKL 308
           +   ++L  L
Sbjct: 294 YTPTARLTPL 303

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG 180
           +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G+     + 
Sbjct: 210 LFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYIC 263
Query: 181 TPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS 239
           +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+        
Sbjct: 264 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK------- 316
Query: 240 DPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQ 298
                + +  ++ IR M   +PN  +    QI  HPW           P   A+ SR+ +
Sbjct: 317 ----VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAIALCSRLLE 367
Query: 299 FRAMSKLKKL 308
           +   ++L  L
Sbjct: 368 YTPTARLTPL 377

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 136 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 189
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 190 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 249
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 250 K-----------VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAI 293
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 294 ALCSRLLEYTPTARLTPL 311

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 123 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 176
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 237 K-----------VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAI 280
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 281 ALCSRLLEYTPTARLTPL 298

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           Y +     +FRS    L   HS GI HRD+KP+N +   D + A LK  DFG A     G
Sbjct: 123 YVKLYMYQLFRS----LAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRG 176
Query: 173 KVYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           +     + +  Y APEL+ G   Y   ID+WSAG +L  LL G   F  +S    L  I+
Sbjct: 177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPN-NQITVAQILKHPWLNYENGEAWDRPIDT 290
                        + +  ++ IR M   +PN  +    QI  HPW           P   
Sbjct: 237 K-----------VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT--PPEAI 280
Query: 291 AIISRVKQFRAMSKLKKL 308
           A+ SR+ ++   ++L  L
Sbjct: 281 ALCSRLLEYTPTARLTPL 298

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTACTNFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR- 233
               V T  Y APE++    Y   +DIWS G I+  L+ G   F           ++ + 
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQL 241
Query: 234 ---EIDFKSDPWPTI----------------------------------SSSAKDLIRRM 256
                +F +   PT+                                  +S A+DL+ +M
Sbjct: 242 GTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP+ +I+V + L+HP++   Y+  EA   P
Sbjct: 302 LVIDPDKRISVDEALRHPYITVWYDPAEAEAPP 334

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAA---SVFRSVVNALHACHSNGIMHRDLKPENFI 148
           Y++ + C    L D ++ R    ER  +    +F  +  A+   HS G+MHRDLKP N  
Sbjct: 91  YIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIF 150
Query: 149 FTTDDENATLKATDFGLAFFFEEGKVYEEV-------------VGTPLYMAPELLGPCKY 195
           FT DD    +K  DFGL    ++ +  + V             VGT LYM+PE +    Y
Sbjct: 151 FTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSY 207
Query: 196 GKEIDIWSAGLILYNLL 212
             ++DI+S GLIL+ LL
Sbjct: 208 SHKVDIFSLGLILFELL 224

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 96  EHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           E C GG +   + + ER  TE     V +  ++AL+  H N I+HRDLK  N +FT D +
Sbjct: 114 EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD 173
Query: 155 NATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK------YGKEIDIWSAGLI 207
              +K  DFG+ A      +  +  +GTP +MAPE++  C+      Y  + D+WS G+ 
Sbjct: 174 ---IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVM-CETSKDRPYDYKADVWSLGIT 229
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP--WPTISSSAKDLIRRMLIRDPNNQI 265
           L  +     P    +    L  I   E    + P  W   SS+ KD +++ L ++ + + 
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDFLKKCLEKNVDARW 286
Query: 266 TVAQILKHPWLNYENGEAWDRPI 288
           T +Q+L+HP++  ++    ++PI
Sbjct: 287 TTSQLLQHPFVTVDS----NKPI 305

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Query: 83  SKTSKSDEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHR 140
           S  SK+   +++ E CD GTL   I  R  E+  +  A  +F  +   +   HS  +++R
Sbjct: 87  SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINR 146
Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEID 200
           DLKP N IF  D     +K  DFGL    +         GT  YM+PE +    YGKE+D
Sbjct: 147 DLKPSN-IFLVD--TKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVD 203
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGT--LTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
           +++ GLIL  LL      +  S + T     I+S   D K           K L++++L 
Sbjct: 204 LYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKE----------KTLLQKLLS 253
Query: 259 RDPNNQITVAQILK 272
           + P ++   ++IL+
Sbjct: 254 KKPEDRPNTSEILR 267

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 96  EHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           E C GG +   + + ER  TE     V +  ++AL+  H N I+HRDLK  N +FT D +
Sbjct: 114 EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD 173
Query: 155 NATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK------YGKEIDIWSAGLI 207
              +K  DFG+ A      +  +  +GTP +MAPE++  C+      Y  + D+WS G+ 
Sbjct: 174 ---IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVM-CETSKDRPYDYKADVWSLGIT 229
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP--WPTISSSAKDLIRRMLIRDPNNQI 265
           L  +     P    +    L  I   E    + P  W   SS+ KD +++ L ++ + + 
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDFLKKCLEKNVDARW 286
Query: 266 TVAQILKHPWLNYENGEAWDRPI 288
           T +Q+L+HP++  ++    ++PI
Sbjct: 287 TTSQLLQHPFVTVDS----NKPI 305

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 96  EHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           E C GG +   + + ER  TE     V +  ++AL+  H N I+HRDLK  N +FT D +
Sbjct: 114 EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD 173
Query: 155 NATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGPCK------YGKEIDIWSAGLI 207
              +K  DFG+ A      +  +  +GTP +MAPE++  C+      Y  + D+WS G+ 
Sbjct: 174 ---IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVM-CETSKDRPYDYKADVWSLGIT 229
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP--WPTISSSAKDLIRRMLIRDPNNQI 265
           L  +     P    +    L  I   E    + P  W   SS+ KD +++ L ++ + + 
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDFLKKCLEKNVDARW 286
Query: 266 TVAQILKHPWLNYENGEAWDRPI 288
           T +Q+L+HP++  ++    ++PI
Sbjct: 287 TTSQLLQHPFVTVDS----NKPI 305

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D   ATLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---ATLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGA------------------- 215
               V T  Y APE++    Y + +DIWS G I+  ++ G                    
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 216 ---QPFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D   ATLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---ATLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGA------------------- 215
               V T  Y APE++    Y + +DIWS G I+  ++ G                    
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 216 ---QPFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 19/137 (13%)
Query: 92  YLKREHCDGGTLVDRISDRERYTER---AAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
           Y++ + C    L D ++ R    +R       +F  +  A+   HS G+MHRDLKP N  
Sbjct: 137 YIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIF 196
Query: 149 FTTDDENATLKATDFGLAFFFEEGKVYEEV-------------VGTPLYMAPELLGPCKY 195
           FT DD    +K  DFGL    ++ +  + V             VGT LYM+PE +    Y
Sbjct: 197 FTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNY 253
Query: 196 GKEIDIWSAGLILYNLL 212
             ++DI+S GLIL+ LL
Sbjct: 254 SHKVDIFSLGLILFELL 270

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+ +G TL + I      +   A +    +++ +   H   I+HRD+KP+N +   
Sbjct: 87  YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI-- 144
Query: 152 DDENATLKATDFGLAFFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILY 209
            D N TLK  DFG+A    E  + +   V+GT  Y +PE        +  DI+S G++LY
Sbjct: 145 -DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLY 203
Query: 210 NLLSGAQPFWAESLYG-TLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVA 268
            +L G  PF  E+     +  I     +  +D    I  S  ++I R   +D  N+    
Sbjct: 204 EMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTI 263
Query: 269 QILK 272
           Q +K
Sbjct: 264 QEMK 267

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 17/223 (7%)
Query: 89  DEGYLKREHCDGGTLVDRISDRERYT--ERAAASVFRSVVNALHACHSNGIMHRDLKPEN 146
           D+ +L  E C  G++ D I + +  T  E   A + R ++  L   H + ++HRD+K +N
Sbjct: 100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQN 159
Query: 147 FIFTTDDENATLKATDFGLAFFFEE--GKVYEEVVGTPLYMAPELLG-----PCKYGKEI 199
            + T   ENA +K  DFG++   +   G+     +GTP +MAPE++         Y  + 
Sbjct: 160 VLLT---ENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVIACDENPDATYDFKS 215
Query: 200 DIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-FKSDPWPTISSSAKDLIRRMLI 258
           D+WS G+    +  GA P         L  I        KS  W   S   +  I   L+
Sbjct: 216 DLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQSFIESCLV 272
Query: 259 RDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRA 301
           ++ + +    Q++KHP++  +  E   R      I R K+ R 
Sbjct: 273 KNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTKKKRG 315

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 47/262 (17%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACK----------------SISKTSKSDEGYLK 94
           FT  E++ +G  G ++   +N T    A K                 I+  S+ D  Y+ 
Sbjct: 29  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 95  R---------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
           +               E+  GG+ +D + +     E   A++ R ++  L   HS   +H
Sbjct: 89  KYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIH 147
Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-VGTPLYMAPELLGPCKYGKE 198
           RD+K  N + +   E+  +K  DFG+A    + ++     VGTP +MAPE++    Y  +
Sbjct: 148 RDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 204
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----SSSAKDLIR 254
            DIWS G+    L  G  P      +  L  +    +  K++P PT+    S   K+ + 
Sbjct: 205 ADIWSLGITAIELARGEPP------HSELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVE 257
Query: 255 RMLIRDPNNQITVAQILKHPWL 276
             L ++P+ + T  ++LKH ++
Sbjct: 258 ACLNKEPSFRPTAKELLKHKFI 279

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 91/229 (39%), Gaps = 50/229 (21%)
Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV----------- 174
           + A+   H + ++HRDLKP N +  +   N  LK  DFGLA   +E              
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 175 YEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM-- 231
             E V T  Y APE +L   KY + +D+WS G IL  L      F        L  I   
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238
Query: 232 -----------------SREIDFKSDP----------WPTISSSAKDLIRRMLIRDPNNQ 264
                            +RE   KS P          +P ++    DL++RML+ DP  +
Sbjct: 239 IGTPHSDNDLRCIESPRAREY-IKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297
Query: 265 ITVAQILKHPWLNY---ENGEAWDRPIDTAIIS--RVKQFRAMSKLKKL 308
           IT  + L+HP+L      N E    PI  +       K+      LKKL
Sbjct: 298 ITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKL 346

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 91/229 (39%), Gaps = 50/229 (21%)
Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV----------- 174
           + A+   H + ++HRDLKP N +  +   N  LK  DFGLA   +E              
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 175 YEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM-- 231
             E V T  Y APE +L   KY + +D+WS G IL  L      F        L  I   
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238
Query: 232 -----------------SREIDFKSDP----------WPTISSSAKDLIRRMLIRDPNNQ 264
                            +RE   KS P          +P ++    DL++RML+ DP  +
Sbjct: 239 IGTPHSDNDLRCIESPRAREY-IKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297
Query: 265 ITVAQILKHPWLNY---ENGEAWDRPIDTAIIS--RVKQFRAMSKLKKL 308
           IT  + L+HP+L      N E    PI  +       K+      LKKL
Sbjct: 298 ITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKL 346

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 164 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 219
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 279
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 280 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 339
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP  +I+V   L+HP++N  Y+  E    P
Sbjct: 340 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 372

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 47/262 (17%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACK----------------SISKTSKSDEGYLK 94
           FT  E++ +G  G ++   +N T    A K                 I+  S+ D  Y+ 
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 95  R---------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
           +               E+  GG+ +D + +     E   A++ R ++  L   HS   +H
Sbjct: 69  KYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIH 127
Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-VGTPLYMAPELLGPCKYGKE 198
           RD+K  N + +   E+  +K  DFG+A    + ++     VGTP +MAPE++    Y  +
Sbjct: 128 RDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----SSSAKDLIR 254
            DIWS G+    L  G  P      +  L  +    +  K++P PT+    S   K+ + 
Sbjct: 185 ADIWSLGITAIELARGEPP------HSELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVE 237
Query: 255 RMLIRDPNNQITVAQILKHPWL 276
             L ++P+ + T  ++LKH ++
Sbjct: 238 ACLNKEPSFRPTAKELLKHKFI 259

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 47/262 (17%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACK----------------SISKTSKSDEGYLK 94
           FT  E++ +G  G ++   +N T    A K                 I+  S+ D  Y+ 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 95  R---------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
           +               E+  GG+ +D + +     E   A++ R ++  L   HS   +H
Sbjct: 84  KYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIH 142
Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE-VVGTPLYMAPELLGPCKYGKE 198
           RD+K  N + +   E+  +K  DFG+A    + ++     VGTP +MAPE++    Y  +
Sbjct: 143 RDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----SSSAKDLIR 254
            DIWS G+    L  G  P      +  L  +    +  K++P PT+    S   K+ + 
Sbjct: 200 ADIWSLGITAIELARGEPP------HSELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVE 252
Query: 255 RMLIRDPNNQITVAQILKHPWL 276
             L ++P+ + T  ++LKH ++
Sbjct: 253 ACLNKEPSFRPTAKELLKHKFI 274

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKPEN +  T+     +K  DFGLA  F    + Y   
Sbjct: 108 SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHE 164
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 273 HPWLN 277
           HP+  
Sbjct: 285 HPFFQ 289

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 47/262 (17%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACK----------------SISKTSKSDEGYLK 94
           FT  E++ +G  G ++   +N T    A K                 I+  S+ D  Y+ 
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 95  R---------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
           +               E+  GG+ +D + +     E   A++ R ++  L   HS   +H
Sbjct: 69  KYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIH 127
Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE-VVGTPLYMAPELLGPCKYGKE 198
           RD+K  N + +   E+  +K  DFG+A    + ++     VGTP +MAPE++    Y  +
Sbjct: 128 RDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----SSSAKDLIR 254
            DIWS G+    L  G  P      +  L  +    +  K++P PT+    S   K+ + 
Sbjct: 185 ADIWSLGITAIELARGEPP------HSELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVE 237
Query: 255 RMLIRDPNNQITVAQILKHPWL 276
             L ++P+ + T  ++LKH ++
Sbjct: 238 ACLNKEPSFRPTAKELLKHKFI 259

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGA------------------- 215
               V T  Y APE++    Y + +DIWS G I+  ++ G                    
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 216 ---QPFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKPEN +  T+     +K  DFGLA  F    + Y   
Sbjct: 108 SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHE 164
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 273 HPWLN 277
           HP+  
Sbjct: 285 HPFFQ 289

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKPEN +  T+     +K  DFGLA  F    + Y   
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHE 163
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 273 HPWLN 277
           HP+  
Sbjct: 284 HPFFQ 288

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGA------------------- 215
               V T  Y APE++    Y + +DIWS G I+  ++ G                    
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 216 ---QPFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 82/186 (44%), Gaps = 29/186 (15%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ +L   HS GI HRD+KP+N +   D  +  LK  DFG A     G+     + +  Y
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSAKILIAGEPNVSXICSRYY 207
Query: 185 MAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------SRE--- 234
            APEL+ G   Y   IDIWS G ++  L+ G   F  ES    L  I+      SRE   
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK 267
Query: 235 -----------IDFKSDPW-----PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN- 277
                         +  P+     P     A DLI R+L   P+ ++T  + L HP+ + 
Sbjct: 268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327
Query: 278 YENGEA 283
              GEA
Sbjct: 328 LRTGEA 333

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKPEN +  T+     +K  DFGLA  F    + Y   
Sbjct: 109 SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHE 165
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 273 HPWLN 277
           HP+  
Sbjct: 286 HPFFQ 290

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 29/226 (12%)
Query: 77  FACKSISKTSKSDEGYLKREHCDGG--TLVDRISDRERYTERAAASVFRSVVNALHACHS 134
           F   ++S+T +  +  L  EH D    T +D++ +    TE     +F+ ++  L   HS
Sbjct: 80  FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LLRGLDFLHS 138
Query: 135 NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
           + ++HRDLKP+N + T+   +  +K  DFGLA  +        VV T  Y APE+L    
Sbjct: 139 HRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT---------- 244
           Y   +D+WS G I   +      F   S    L  I+        + WP           
Sbjct: 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH 255
Query: 245 -------------ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                        I    KDL+ + L  +P  +I+    L HP+  
Sbjct: 256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 91/229 (39%), Gaps = 50/229 (21%)
Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV----------- 174
           + A+   H + ++HRDLKP N +  +   N  LK  DFGLA   +E              
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 175 YEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM-- 231
             E V T  Y APE +L   KY + +D+WS G IL  L      F        L  I   
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238
Query: 232 -----------------SREIDFKSDP----------WPTISSSAKDLIRRMLIRDPNNQ 264
                            +RE   KS P          +P ++    DL++RML+ DP  +
Sbjct: 239 IGTPHSDNDLRCIESPRAREY-IKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297
Query: 265 ITVAQILKHPWLNY---ENGEAWDRPIDTAIIS--RVKQFRAMSKLKKL 308
           IT  + L+HP+L      N E    PI  +       K+      LKKL
Sbjct: 298 ITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKL 346

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 116/270 (42%), Gaps = 53/270 (19%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------DEGYLKR 95
           + I  EL  G  G++Y      TG   A K I   S+                D  Y+ +
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 96  ---------------EHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMH 139
                          E C GG +   + + +R  TE     V R ++ AL+  HS  I+H
Sbjct: 81  LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 140 RDLKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPEL-----LGPC 193
           RDLK  N + T + +   ++  DFG+ A   +  +  +  +GTP +MAPE+     +   
Sbjct: 141 RDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 194 KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK--- 250
            Y  + DIWS G+ L  +     P    +    L  I       KSDP PT+ + +K   
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA------KSDP-PTLLTPSKWSV 250
Query: 251 ---DLIRRMLIRDPNNQITVAQILKHPWLN 277
              D ++  L ++P  + + AQ+L+HP+++
Sbjct: 251 EFRDFLKIALDKNPETRPSAAQLLEHPFVS 280

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKPEN +  T+     +K  DFGLA  F    + Y   
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHE 166
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 273 HPWLN 277
           HP+  
Sbjct: 287 HPFFQ 291

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 164 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 219
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 279
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 280 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 339
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP  +I+V   L+HP++N  Y+  E    P
Sbjct: 340 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 372

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 29/226 (12%)
Query: 77  FACKSISKTSKSDEGYLKREHCDGG--TLVDRISDRERYTERAAASVFRSVVNALHACHS 134
           F   ++S+T +  +  L  EH D    T +D++ +    TE     +F+ ++  L   HS
Sbjct: 80  FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LLRGLDFLHS 138
Query: 135 NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
           + ++HRDLKP+N + T+   +  +K  DFGLA  +        VV T  Y APE+L    
Sbjct: 139 HRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT---------- 244
           Y   +D+WS G I   +      F   S    L  I+        + WP           
Sbjct: 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH 255
Query: 245 -------------ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                        I    KDL+ + L  +P  +I+    L HP+  
Sbjct: 256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 116/270 (42%), Gaps = 53/270 (19%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------DEGYLKR 95
           + I  EL  G  G++Y      TG   A K I   S+                D  Y+ +
Sbjct: 13  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 96  ---------------EHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMH 139
                          E C GG +   + + +R  TE     V R ++ AL+  HS  I+H
Sbjct: 73  LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 140 RDLKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPEL-----LGPC 193
           RDLK  N + T + +   ++  DFG+ A   +  +  +  +GTP +MAPE+     +   
Sbjct: 133 RDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 194 KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK--- 250
            Y  + DIWS G+ L  +     P    +    L  I       KSDP PT+ + +K   
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA------KSDP-PTLLTPSKWSV 242
Query: 251 ---DLIRRMLIRDPNNQITVAQILKHPWLN 277
              D ++  L ++P  + + AQ+L+HP+++
Sbjct: 243 EFRDFLKIALDKNPETRPSAAQLLEHPFVS 272

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 47/210 (22%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D +   L+  D+GLA F+   + Y   V +  +
Sbjct: 141 LLKALDYCHSKGIMHRDVKPHNVMI--DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 198
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LYG 
Sbjct: 199 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGY 258
Query: 227 LTAIMSREIDFKSDP-------------WPT---------ISSSAKDLIRRMLIRDPNNQ 264
           L       ID   DP             W           +S  A DL+ ++L  D   +
Sbjct: 259 LKKY---HIDL--DPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQR 313
Query: 265 ITVAQILKHPWLNYENGEAWDRPIDTAIIS 294
           +T  + ++HP+      E      D A++S
Sbjct: 314 LTAKEAMEHPYFYPVVKEQSQPSADNAVLS 343

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 29/226 (12%)
Query: 77  FACKSISKTSKSDEGYLKREHCDGG--TLVDRISDRERYTERAAASVFRSVVNALHACHS 134
           F   ++S+T +  +  L  EH D    T +D++ +    TE     +F+ ++  L   HS
Sbjct: 80  FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LLRGLDFLHS 138
Query: 135 NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
           + ++HRDLKP+N + T+   +  +K  DFGLA  +        VV T  Y APE+L    
Sbjct: 139 HRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT---------- 244
           Y   +D+WS G I   +      F   S    L  I+        + WP           
Sbjct: 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH 255
Query: 245 -------------ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                        I    KDL+ + L  +P  +I+    L HP+  
Sbjct: 256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 98/243 (40%), Gaps = 44/243 (18%)
Query: 71  NSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAAS---------V 121
           N   L   C + S+T +  +  L  EH D         D   Y ++A            +
Sbjct: 67  NVVRLMDVCAT-SRTDREIKVTLVFEHVD--------QDLRTYLDKAPPPGLPAETIKDL 117
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
            R  +  L   H+N I+HRDLKPEN + T+     T+K  DFGLA  +      + VV T
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALDPVVVT 174
Query: 182 PLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI-----MSREID 236
             Y APE+L    Y   +D+WS G I   +      F   S    L  I     +  E D
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 237 FKSD------------PWPTIS------SSAKDLIRRMLIRDPNNQITVAQILKHPWLNY 278
           +  D            P P  S       S   L+  ML  +P+ +I+  + L+H +L+ 
Sbjct: 235 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
Query: 279 ENG 281
           + G
Sbjct: 295 DEG 297

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVL--IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 318 AMEHPYF 324

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 318 AMEHPYF 324

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 127 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 182
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQ------------------ 216
               V T  Y APE++    Y + +DIWS G I+  ++ G                    
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 242
Query: 217 ----PFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 243 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 302
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 303 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 335

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQ------------------ 216
               V T  Y APE++    Y + +DIWS G I+  ++ G                    
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 217 ----PFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 127 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 182
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 242
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 243 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 302
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP  +I+V   L+HP++N  Y+  E    P
Sbjct: 303 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 335

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 318 AMEHPYF 324

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 318 AMEHPYF 324

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 50/287 (17%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACK----------------SISKTSKSDEGYLK 94
           FT  E + +G  G ++   +N T    A K                 I+  S+ D  Y+ 
Sbjct: 25  FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 95  R---------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
           +               E+  GG+ +D +     + E   A++ + ++  L   HS   +H
Sbjct: 85  KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP-FDEFQIATMLKEILKGLDYLHSEKKIH 143
Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-VGTPLYMAPELLGPCKYGKE 198
           RD+K  N + +   E   +K  DFG+A    + ++     VGTP +MAPE++    Y  +
Sbjct: 144 RDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 200
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----SSSAKDLIR 254
            DIWS G+    L  G  P         L  I       K++P PT+    + S K+ I 
Sbjct: 201 ADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP------KNNP-PTLVGDFTKSFKEFID 253
Query: 255 RMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRA 301
             L +DP+ + T  ++LKH ++   + +       T +I R K+++A
Sbjct: 254 ACLNKDPSFRPTAKELLKHKFIVKNSKKT---SYLTELIDRFKRWKA 297

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 318 AMEHPYF 324

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 318 AMEHPYF 324

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP  +I+V   L+HP++N  Y+  E    P
Sbjct: 302 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 334

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP  +I+V   L+HP++N  Y+  E    P
Sbjct: 302 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 334

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 318 AMEHPYF 324

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 79  CKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAA-SVFRSVVNALHACHSNGI 137
            K  +   K    +++ E+C+  TL D I       +R     +FR ++ AL   HS GI
Sbjct: 78  VKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGI 137
Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEE---------------GKVYEEVVGTP 182
           +HR+LKP N      DE+  +K  DFGLA                           +GT 
Sbjct: 138 IHRNLKPXNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA 194
Query: 183 LYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPF-WAESLYGTLTAIMSREIDFKSD 240
            Y+A E+L G   Y ++ID +S G+I +  +    PF         L  + S  I+F  D
Sbjct: 195 XYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNILKKLRSVSIEFPPD 251
Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                    K +IR ++  DPN +     +L   WL
Sbjct: 252 FDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 318 AMEHPYF 324

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 127 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 182
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 242
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 243 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 302
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP  +I+V   L+HP++N  Y+  E    P
Sbjct: 303 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 335

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 125 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 180
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 181 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 240
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 241 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 300
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP  +I+V   L+HP++N  Y+  E    P
Sbjct: 301 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 333

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 318 AMEHPYF 324

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 256
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 317 AMEHPYF 323

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 128 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 183
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQ------------------ 216
               V T  Y APE++    Y + +DIWS G I+  ++ G                    
Sbjct: 184 MVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 243
Query: 217 ----PFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 244 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 303
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 304 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 336

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 318 AMEHPYF 324

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 138 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 195
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 196 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 255
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 256 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 315
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 316 AMEHPYF 322

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 256
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 317 AMEHPYF 323

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 42/201 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---XTLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN 277
           L+ DP  +I+V   L+HP++N
Sbjct: 302 LVIDPAKRISVDDALQHPYIN 322

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTP 182
            ++  L  CH   ++HRDLKP+N +    +E   LK  DFGLA       K Y+  V T 
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYDNEVVTL 164
Query: 183 LYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES-----------LYGTLT-- 228
            Y  P+ LLG   Y  +ID+W  G I Y + +G +P +  S           + GT T  
Sbjct: 165 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG-RPLFPGSTVEEQLHFIFRILGTPTEE 223
Query: 229 ---AIMSREIDFKSDPWPT------------ISSSAKDLIRRMLIRDPNNQITVAQILKH 273
               I+S E +FK+  +P             + S   DL+ ++L  +  N+I+    +KH
Sbjct: 224 TWPGILSNE-EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282
Query: 274 PWLNYENGEAWDRPIDTAIISRVKQFR 300
           P+     GE   +  DT  I  +K+ +
Sbjct: 283 PFF-LSLGERIHKLPDTTSIFALKEIQ 308

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 163
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 273 HPWLN 277
           HP+  
Sbjct: 284 HPFFQ 288

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 120 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 175
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 235
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 236 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 295
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP  +I+V   L+HP++N  Y+  E    P
Sbjct: 296 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 328

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 120 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 175
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 235
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 236 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 295
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP  +I+V   L+HP++N  Y+  E    P
Sbjct: 296 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 328

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 119 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 174
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 294
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP  +I+V   L+HP++N  Y+  E    P
Sbjct: 295 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 327

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
            E  V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
Query: 213 SGAQPFWAESLYGTLT---------AIMSREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+          A  S E  F    +P  S       S A+DL+ +M
Sbjct: 242 GTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 318 AMEHPYF 324

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 107 SYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHE 163
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 273 HPWLN 277
           HP+  
Sbjct: 284 HPFFQ 288

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +
Sbjct: 145 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 202
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LY  
Sbjct: 203 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 262
Query: 227 L-----------TAIMSR------EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +             I+ R      E    S+    +S  A D + ++L  D  +++T  +
Sbjct: 263 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 322
Query: 270 ILKHPWL 276
            ++HP+ 
Sbjct: 323 AMEHPYF 329

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 163
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 273 HPWLN 277
           HP+  
Sbjct: 284 HPFFQ 288

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 93/222 (41%), Gaps = 47/222 (21%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAA---------ASVFRSVVNALHACHSNGIMHRDL 142
           YL  EH D         D +++ + +A          S    ++  L  CHS+ ++HRDL
Sbjct: 81  YLVFEHVD--------QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 143 KPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCK-YGKEID 200
           KP+N +  T+     +K  DFGLA  F    + Y   V T  Y APE+L  CK Y   +D
Sbjct: 133 KPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAI--------------MSREIDFKSD--PW-- 242
           IWS G I   +++    F  +S    L  I              ++   D+K     W  
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 243 -------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                  P +    + L+ +ML  DPN +I+    L HP+  
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 109 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 165
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 273 HPWLN 277
           HP+  
Sbjct: 286 HPFFQ 290

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 162
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 273 HPWLN 277
           HP+  
Sbjct: 283 HPFFQ 287

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 42/201 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---XTLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN 277
           L+ DP  +I+V   L+HP++N
Sbjct: 302 LVIDPAKRISVDDALQHPYIN 322

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 162
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 273 HPWLN 277
           HP+  
Sbjct: 283 HPFFQ 287

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 163
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 273 HPWLN 277
           HP+  
Sbjct: 284 HPFFQ 288

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 108 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 164
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 273 HPWLN 277
           HP+  
Sbjct: 285 HPFFQ 289

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLXGIKH-LHSAGIIHRDLKPSNIVVKSD---XTLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP  +I+V   L+HP++N  Y+  E    P
Sbjct: 302 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 334

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHE 162
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 273 HPWLN 277
           HP+  
Sbjct: 283 HPFFQ 287

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHE 162
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 273 HPWLN 277
           HP+  
Sbjct: 283 HPFFQ 287

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 163
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 273 HPWLN 277
           HP+  
Sbjct: 284 HPFFQ 288

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 108 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHE 164
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 273 HPWLN 277
           HP+  
Sbjct: 285 HPFFQ 289

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 109 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 165
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 273 HPWLN 277
           HP+  
Sbjct: 286 HPFFQ 290

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 108 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 164
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 273 HPWLN 277
           HP+  
Sbjct: 285 HPFFQ 289

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHE 163
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 273 HPWLN 277
           HP+  
Sbjct: 284 HPFFQ 288

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHE 162
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 273 HPWLN 277
           HP+  
Sbjct: 283 HPFFQ 287

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHE 163
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 273 HPWLN 277
           HP+  
Sbjct: 284 HPFFQ 288

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHE 163
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 273 HPWLN 277
           HP+  
Sbjct: 284 HPFFQ 288

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHE 162
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 273 HPWLN 277
           HP+  
Sbjct: 283 HPFFQ 287

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 47/192 (24%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D +   L+  D+GLA F+   + Y   V +  +
Sbjct: 146 LLKALDYCHSKGIMHRDVKPHNVM--IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 203
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------------AESLYGT 226
             PELL   + Y   +D+WS G +L +++   +PF+                  E LYG 
Sbjct: 204 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGY 263
Query: 227 LTAIMSREIDFKSDP-------------WPT---------ISSSAKDLIRRMLIRDPNNQ 264
           L       ID   DP             W           +S  A DL+ ++L  D   +
Sbjct: 264 LKKY---HIDL--DPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQR 318
Query: 265 ITVAQILKHPWL 276
           +T  + ++HP+ 
Sbjct: 319 LTAKEAMEHPYF 330

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 166
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 273 HPWLN 277
           HP+  
Sbjct: 287 HPFFQ 291

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 111 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHE 167
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 228 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
Query: 273 HPWLN 277
           HP+  
Sbjct: 288 HPFFQ 292

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 111 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 167
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 228 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
Query: 273 HPWLN 277
           HP+  
Sbjct: 288 HPFFQ 292

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 166
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 273 HPWLN 277
           HP+  
Sbjct: 287 HPFFQ 291

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 109 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 165
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 273 HPWLN 277
           HP+  
Sbjct: 286 HPFFQ 290

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 97/243 (39%), Gaps = 44/243 (18%)
Query: 71  NSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAAS---------V 121
           N   L   C + S+T +  +  L  EH D         D   Y ++A            +
Sbjct: 67  NVVRLMDVCAT-SRTDREIKVTLVFEHVD--------QDLRTYLDKAPPPGLPAETIKDL 117
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
            R  +  L   H+N I+HRDLKPEN + T+     T+K  DFGLA  +        VV T
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALAPVVVT 174
Query: 182 PLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI-----MSREID 236
             Y APE+L    Y   +D+WS G I   +      F   S    L  I     +  E D
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 237 FKSD------------PWPTIS------SSAKDLIRRMLIRDPNNQITVAQILKHPWLNY 278
           +  D            P P  S       S   L+  ML  +P+ +I+  + L+H +L+ 
Sbjct: 235 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
Query: 279 ENG 281
           + G
Sbjct: 295 DEG 297

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 166
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 273 HPWLN 277
           HP+  
Sbjct: 287 HPFFQ 291

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLXGIKH-LHSAGIIHRDLKPSNIVVKSD---XTLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP  +I+V   L+HP++N  Y+  E    P
Sbjct: 302 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 334

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 119 ERMSYLLYQMLXGIKH-LHSAGIIHRDLKPSNIVVKSD---XTLKILDFGLARTAGTSFM 174
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +DIWS G I+  +                      L
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------------SSSAKDLIRRM 256
               P + + L  T+   +     +    +P +                +S A+DL+ +M
Sbjct: 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 294
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ DP  +I+V   L+HP++N  Y+  E    P
Sbjct: 295 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 327

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQ------------------ 216
               V T  Y APE++    Y + +DIWS G I+  ++ G                    
Sbjct: 182 MTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 217 ----PFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHE 166
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 273 HPWLN 277
           HP+  
Sbjct: 287 HPFFQ 291

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 114 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHE 170
Query: 179 VGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE+L  CK Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 171 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 231 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 273 HPWLN 277
           HP+  
Sbjct: 291 HPFFQ 295

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 97/243 (39%), Gaps = 44/243 (18%)
Query: 71  NSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAAS---------V 121
           N   L   C + S+T +  +  L  EH D         D   Y ++A            +
Sbjct: 75  NVVRLMDVCAT-SRTDREIKVTLVFEHVD--------QDLRTYLDKAPPPGLPAETIKDL 125
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
            R  +  L   H+N I+HRDLKPEN + T+     T+K  DFGLA  +        VV T
Sbjct: 126 MRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALTPVVVT 182
Query: 182 PLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI-----MSREID 236
             Y APE+L    Y   +D+WS G I   +      F   S    L  I     +  E D
Sbjct: 183 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242
Query: 237 FKSD------------PWPTIS------SSAKDLIRRMLIRDPNNQITVAQILKHPWLNY 278
           +  D            P P  S       S   L+  ML  +P+ +I+  + L+H +L+ 
Sbjct: 243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302
Query: 279 ENG 281
           + G
Sbjct: 303 DEG 305

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDDE 154
           EH DGG+L   +    R  E+    V  +V+  L +    + IMHRD+KP N +  +  E
Sbjct: 84  EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 155 NATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
              +K  DFG++     G++ + +    VGT  YM+PE L    Y  + DIWS GL L  
Sbjct: 144 ---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 211 LLSGAQPFW---AESLYGTLTAIMSREIDFKSDPWPTISSSA-----KDLIRRMLIRDPN 262
           +  G  P     A+       AI        ++P P + S       +D + + LI++P 
Sbjct: 196 MAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 255
Query: 263 NQITVAQILKHPWLNYENGEAWD 285
            +  + Q++ H ++   + E  D
Sbjct: 256 ERADLKQLMVHAFIKRSDAEEVD 278

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 37/187 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E   L+  D+GLA F+  GK Y   V +  +
Sbjct: 155 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 212
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------AESLYGT--LTAI 230
             PELL   + Y   +D+WS G +   ++   +PF+              + GT  L A 
Sbjct: 213 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAY 272
Query: 231 MSR---EID---------FKSDPW---------PTISSSAKDLIRRMLIRDPNNQITVAQ 269
           +++   E+D             PW           +S  A D + ++L  D   ++T  +
Sbjct: 273 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 332
Query: 270 ILKHPWL 276
            + HP+ 
Sbjct: 333 AMTHPYF 339

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 86  SKSDEGYLK--REHCDGGTLVDRISDR---ERYTERAAASVFRSVVNALHACHSNGIMHR 140
           S S+ G++K   E   GG+L   +  +    +  E+      + ++  L   H N I+HR
Sbjct: 87  SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEE-GKVYEEVVGTPLYMAPELL--GPCKYGK 197
           D+K +N +  T   +  LK +DFG +          E   GT  YMAPE++  GP  YGK
Sbjct: 147 DIKGDNVLINT--YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW--PTISSSAKDLIRR 255
             DIWS G  +  + +G  PF+     G   A M +   FK  P    ++S+ AK  I +
Sbjct: 205 AADIWSLGCTIIEMATGKPPFYE---LGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 261
Query: 256 MLIRDPNNQITVAQILKHPWLNYENGEAWDRP 287
               DP+ +     +L   +L   + +   +P
Sbjct: 262 CFEPDPDKRACANDLLVDEFLKVSSKKKKTQP 293

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 118 AASVFRS--VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY 175
           A +VF +  +   L   H   I++RDLKPEN +    D++  ++ +D GLA    EG+  
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTI 342
Query: 176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI 235
           +  VGT  YMAPE++   +Y    D W+ G +LY +++G  PF           I   E+
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK-----KKIKREEV 397
Query: 236 DFKSDPWP-----TISSSAKDLIRRMLIRDPNNQI-----TVAQILKHP 274
           +      P       S  A+ L  ++L +DP  ++     +  ++ +HP
Sbjct: 398 ERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 108/263 (41%), Gaps = 47/263 (17%)
Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACK----------------SISKTSKSDEGYLK 94
           FT  + + +G  G +Y   +N T    A K                 I+  S+ D  Y+ 
Sbjct: 21  FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 95  R---------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
           R               E+  GG+ +D +       E   A++ R ++  L   HS   +H
Sbjct: 81  RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP-LEETYIATILREILKGLDYLHSERKIH 139
Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE-VVGTPLYMAPELLGPCKYGKE 198
           RD+K  N + +   E   +K  DFG+A    + ++     VGTP +MAPE++    Y  +
Sbjct: 140 RDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----SSSAKDLIR 254
            DIWS G+    L  G  P         L  +    +  K+ P PT+    S   K+ + 
Sbjct: 197 ADIWSLGITAIELAKGEPP------NSDLHPMRVLFLIPKNSP-PTLEGQHSKPFKEFVE 249
Query: 255 RMLIRDPNNQITVAQILKHPWLN 277
             L +DP  + T  ++LKH ++ 
Sbjct: 250 ACLNKDPRFRPTAKELLKHKFIT 272

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 97/243 (39%), Gaps = 44/243 (18%)
Query: 71  NSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAAS---------V 121
           N   L   C + S+T +  +  L  EH D         D   Y ++A            +
Sbjct: 67  NVVRLMDVCAT-SRTDREIKVTLVFEHVD--------QDLRTYLDKAPPPGLPAETIKDL 117
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
            R  +  L   H+N I+HRDLKPEN + T+     T+K  DFGLA  +        VV T
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALFPVVVT 174
Query: 182 PLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI-----MSREID 236
             Y APE+L    Y   +D+WS G I   +      F   S    L  I     +  E D
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 237 FKSD------------PWPTIS------SSAKDLIRRMLIRDPNNQITVAQILKHPWLNY 278
           +  D            P P  S       S   L+  ML  +P+ +I+  + L+H +L+ 
Sbjct: 235 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
Query: 279 ENG 281
           + G
Sbjct: 295 DEG 297

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 118 AASVFRS--VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY 175
           A +VF +  +   L   H   I++RDLKPEN +    D++  ++ +D GLA    EG+  
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTI 342
Query: 176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI 235
           +  VGT  YMAPE++   +Y    D W+ G +LY +++G  PF           I   E+
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK-----KKIKREEV 397
Query: 236 DFKSDPWP-----TISSSAKDLIRRMLIRDPNNQI-----TVAQILKHP 274
           +      P       S  A+ L  ++L +DP  ++     +  ++ +HP
Sbjct: 398 ERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 126 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 181
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
            E  V T  Y APE++    Y + +D+WS G I+  +                      L
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
Query: 213 SGAQPFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 43/190 (22%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E   L+  D+GLA F+  GK Y   V +  +
Sbjct: 136 LLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 193
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------AESLYGT------ 226
             PELL   + Y   +D+WS G +   ++   +PF+              + GT      
Sbjct: 194 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 253
Query: 227 -----------LTAIMSREIDFKSDPW---------PTISSSAKDLIRRMLIRDPNNQIT 266
                      L A++ R       PW           +S  A D + ++L  D   ++T
Sbjct: 254 LNKYRIELDPQLEALVGRH---SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 310
Query: 267 VAQILKHPWL 276
             + + HP+ 
Sbjct: 311 ALEAMTHPYF 320

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 35/194 (18%)
Query: 112 RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE 171
           +++E     +   ++  L   HS G++HRDLKP N      +E+  LK  DFGLA    +
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLA-RHAD 177
Query: 172 GKVYEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI 230
            ++   VV T  Y APE +L    Y + +DIWS G I+  +L+G   F  +     LT I
Sbjct: 178 AEMTGYVV-TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
Query: 231 M----------------------------SREIDFKSDPWPTISSSAKDLIRRMLIRDPN 262
           +                            +   DF +  +P  S  A DL+ +ML  D +
Sbjct: 237 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVD 295
Query: 263 NQITVAQILKHPWL 276
            ++T AQ L HP+ 
Sbjct: 296 KRLTAAQALTHPFF 309

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 43/190 (22%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E   L+  D+GLA F+  GK Y   V +  +
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 192
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------AESLYGT------ 226
             PELL   + Y   +D+WS G +   ++   +PF+              + GT      
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 252
Query: 227 -----------LTAIMSREIDFKSDPW---------PTISSSAKDLIRRMLIRDPNNQIT 266
                      L A++ R       PW           +S  A D + ++L  D   ++T
Sbjct: 253 LNKYRIELDPQLEALVGRH---SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 309
Query: 267 VAQILKHPWL 276
             + + HP+ 
Sbjct: 310 ALEAMTHPYF 319

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 46/279 (16%)
Query: 45  EDIKL-HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR-------- 95
           ED+   HF I   + +G  G++ +  +N T   +A K ++K    +   ++         
Sbjct: 10  EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIM 69
Query: 96  ---EH----------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALH 130
              EH                        GG L   +     + E         +V AL 
Sbjct: 70  QGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD 129
Query: 131 ACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL 190
              +  I+HRD+KP+N +    DE+  +  TDF +A           + GT  YMAPE+ 
Sbjct: 130 YLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMF 186
Query: 191 GPCK---YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP--WPTI 245
              K   Y   +D WS G+  Y LL G +P+   S   +   + + E    + P  W   
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW--- 243
Query: 246 SSSAKDLIRRMLIRDPNNQIT-VAQILKHPWLNYENGEA 283
           S     L++++L  +P+ + + ++ +   P++N  N +A
Sbjct: 244 SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDA 282

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 43/190 (22%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E   L+  D+GLA F+  GK Y   V +  +
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 192
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------AESLYGT------ 226
             PELL   + Y   +D+WS G +   ++   +PF+              + GT      
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 252
Query: 227 -----------LTAIMSREIDFKSDPW---------PTISSSAKDLIRRMLIRDPNNQIT 266
                      L A++ R       PW           +S  A D + ++L  D   ++T
Sbjct: 253 LNKYRIELDPQLEALVGRH---SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 309
Query: 267 VAQILKHPWL 276
             + + HP+ 
Sbjct: 310 ALEAMTHPYF 319

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 43/190 (22%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E   L+  D+GLA F+  GK Y   V +  +
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------AESLYGT------ 226
             PELL   + Y   +D+WS G +   ++   +PF+              + GT      
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 227 -----------LTAIMSREIDFKSDPW---------PTISSSAKDLIRRMLIRDPNNQIT 266
                      L A++ R       PW           +S  A D + ++L  D   ++T
Sbjct: 252 LNKYRIELDPQLEALVGRH---SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 267 VAQILKHPWL 276
             + + HP+ 
Sbjct: 309 ALEAMTHPYF 318

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 43/190 (22%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E   L+  D+GLA F+  GK Y   V +  +
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------AESLYGT------ 226
             PELL   + Y   +D+WS G +   ++   +PF+              + GT      
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 227 -----------LTAIMSREIDFKSDPW---------PTISSSAKDLIRRMLIRDPNNQIT 266
                      L A++ R       PW           +S  A D + ++L  D   ++T
Sbjct: 252 LNKYRIELDPQLEALVGRH---SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 267 VAQILKHPWL 276
             + + HP+ 
Sbjct: 309 ALEAMTHPYF 318

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 86  SKSDEGYLK--REHCDGGTLVDRISDRE---RYTERAAASVFRSVVNALHACHSNGIMHR 140
           S S+ G++K   E   GG+L   +  +    +  E+      + ++  L   H N I+HR
Sbjct: 73  SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEE-GKVYEEVVGTPLYMAPELL--GPCKYGK 197
           D+K +N +  T   +  LK +DFG +          E   GT  YMAPE++  GP  YGK
Sbjct: 133 DIKGDNVLINT--YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGK 190
Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP--WPTISSSAKDLIRR 255
             DIWS G  +  + +G  PF+     G   A M +   FK  P    ++S+ AK  I +
Sbjct: 191 AADIWSLGCTIIEMATGKPPFYE---LGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 247
Query: 256 MLIRDPN-----NQITVAQILK 272
               DP+     N + V + LK
Sbjct: 248 CFEPDPDKRACANDLLVDEFLK 269

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 43/190 (22%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E   L+  D+GLA F+  GK Y   V +  +
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------AESLYGT------ 226
             PELL   + Y   +D+WS G +   ++   +PF+              + GT      
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 227 -----------LTAIMSREIDFKSDPW---------PTISSSAKDLIRRMLIRDPNNQIT 266
                      L A++ R       PW           +S  A D + ++L  D   ++T
Sbjct: 252 LNKYRIELDPQLEALVGRH---SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 267 VAQILKHPWL 276
             + + HP+ 
Sbjct: 309 ALEAMTHPYF 318

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 43/190 (22%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E   L+  D+GLA F+  GK Y   V +  +
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------AESLYGT------ 226
             PELL   + Y   +D+WS G +   ++   +PF+              + GT      
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 227 -----------LTAIMSREIDFKSDPW---------PTISSSAKDLIRRMLIRDPNNQIT 266
                      L A++ R       PW           +S  A D + ++L  D   ++T
Sbjct: 252 LNKYRIELDPQLEALVGRH---SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 267 VAQILKHPWL 276
             + + HP+ 
Sbjct: 309 ALEAMTHPYF 318

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 43/190 (22%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E   L+  D+GLA F+  GK Y   V +  +
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------AESLYGT------ 226
             PELL   + Y   +D+WS G +   ++   +PF+              + GT      
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 227 -----------LTAIMSREIDFKSDPW---------PTISSSAKDLIRRMLIRDPNNQIT 266
                      L A++ R       PW           +S  A D + ++L  D   ++T
Sbjct: 252 LNKYRIELDPQLEALVGRH---SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 267 VAQILKHPWL 276
             + + HP+ 
Sbjct: 309 ALEAMTHPYF 318

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 88/210 (41%), Gaps = 40/210 (19%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-----FFF 169
           E  A      ++  L   HS  ++HRDLKP N    T+D    LK  DFGLA      + 
Sbjct: 119 EEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED--LVLKIGDFGLARIMDPHYS 176
Query: 170 EEGKVYEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA-------- 220
            +G + E +V T  Y +P  LL P  Y K ID+W+AG I   +L+G   F          
Sbjct: 177 HKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ 235
Query: 221 --------------ESLYGTLTAIMSREIDFKSDP----WPTISSSAKDLIRRMLIRDPN 262
                         + L   +   +  ++     P     P IS  A D + ++L   P 
Sbjct: 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPM 295
Query: 263 NQITVAQILKHPWLNYENGEAWDRPIDTAI 292
           +++T  + L HP+++      +  P+D  I
Sbjct: 296 DRLTAEEALSHPYMS-----IYSFPMDEPI 320

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L+  +  + +  E  A      +  AL+  H  GI++RDLK +N +    D  
Sbjct: 101 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSE 157
Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TD+G+       G       GTP Y+APE+L    YG  +D W+ G++++ +++G
Sbjct: 158 GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 217
Query: 215 AQPFWAESLYGT------------LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN 262
             PF    + G+               I+ ++I        ++S  A  +++  L +DP 
Sbjct: 218 RSPF---DIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SMSVKAASVLKSFLNKDPK 270
Query: 263 N------QITVAQILKHPWL 276
                  Q   A I  HP+ 
Sbjct: 271 ERLGCLPQTGFADIQGHPFF 290

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 43/190 (22%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++ AL  CHS GIMHRD+KP N +   D E   L+  D+GLA F+  GK Y   V +  +
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-----------AESLYGT------ 226
             PELL   + Y   +D+WS G +   ++   +PF+              + GT      
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 227 -----------LTAIMSREIDFKSDPW---------PTISSSAKDLIRRMLIRDPNNQIT 266
                      L A++ R       PW           +S  A D + ++L  D   ++T
Sbjct: 252 LNKYRIELDPQLEALVGRH---SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 267 VAQILKHPWL 276
             + + HP+ 
Sbjct: 309 ALEAMTHPYF 318

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 75/182 (41%), Gaps = 29/182 (15%)
Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLY 184
           +  L   H + I+HRDLKP N +    DEN  LK  DFGLA  F    + Y   V T  Y
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWY 178
Query: 185 MAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP 243
            APELL G   YG  +D+W+ G IL  LL        +S    LT I         + WP
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238
Query: 244 TISSSAK------------------------DLIRRMLIRDPNNQITVAQILKHPWLNYE 279
            + S                           DLI+ + + +P  +IT  Q LK  + +  
Sbjct: 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 298
Query: 280 NG 281
            G
Sbjct: 299 PG 300

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L+  +  + +  E  A      +  AL+  H  GI++RDLK +N +    D  
Sbjct: 133 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSE 189
Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TD+G+       G       GTP Y+APE+L    YG  +D W+ G++++ +++G
Sbjct: 190 GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
Query: 215 AQPFWAESLYGT------------LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP- 261
             PF    + G+               I+ ++I        ++S  A  +++  L +DP 
Sbjct: 250 RSPF---DIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPK 302
Query: 262 -----NNQITVAQILKHPWL 276
                + Q   A I  HP+ 
Sbjct: 303 ERLGCHPQTGFADIQGHPFF 322

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L+  +  + +  E  A      +  AL+  H  GI++RDLK +N +    D  
Sbjct: 86  EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSE 142
Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TD+G+       G       GTP Y+APE+L    YG  +D W+ G++++ +++G
Sbjct: 143 GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 202
Query: 215 AQPFWAESLYGT------------LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP- 261
             PF    + G+               I+ ++I        ++S  A  +++  L +DP 
Sbjct: 203 RSPF---DIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPK 255
Query: 262 -----NNQITVAQILKHPWL 276
                + Q   A I  HP+ 
Sbjct: 256 ERLGCHPQTGFADIQGHPFF 275

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN 155
           E+ +GG L+  +  + +  E  A      +  AL+  H  GI++RDLK +N +    D  
Sbjct: 90  EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSE 146
Query: 156 ATLKATDFGLAF-FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
             +K TD+G+       G       GTP Y+APE+L    YG  +D W+ G++++ +++G
Sbjct: 147 GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
Query: 215 AQPFWAESLYGT------------LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP- 261
             PF    + G+               I+ ++I        ++S  A  +++  L +DP 
Sbjct: 207 RSPF---DIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPK 259
Query: 262 -----NNQITVAQILKHPWL 276
                + Q   A I  HP+ 
Sbjct: 260 ERLGCHPQTGFADIQGHPFF 279

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 116 RAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           +    + +SV+N+    H+   I HRD+KP N +    D+N  +K +DFG + +  + K+
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYMVDKKI 207
Query: 175 YEEVVGTPLYMAPELLG--PCKYGKEIDIWSAGLILYNLLSGAQPFWAE-SLYGTLTAIM 231
            +   GT  +M PE         G ++DIWS G+ LY +     PF  + SL      I 
Sbjct: 208 -KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIR 266
Query: 232 SREIDFKSDP----WPT-----------ISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           ++ I++  D     +P            +S+   D ++  L ++P  +IT    LKH WL
Sbjct: 267 TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 35/193 (18%)
Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
           ++E     +   ++  L   HS G++HRDLKP N      +E+  LK  DFGLA    + 
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLA-RHADA 196
Query: 173 KVYEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
           ++   VV T  Y APE +L    Y + +DIWS G I+  +L+G   F  +     LT I+
Sbjct: 197 EMTGYVV-TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 255
Query: 232 ----------------------------SREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
                                       +   DF +  +P  S  A DL+ +ML  D + 
Sbjct: 256 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDK 314
Query: 264 QITVAQILKHPWL 276
           ++T AQ L HP+ 
Sbjct: 315 RLTAAQALTHPFF 327

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHE 163
Query: 179 VGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE LLG   Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 164 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 273 HPWLN 277
           HP+  
Sbjct: 284 HPFFQ 288

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEV 178
           S    ++  L  CHS+ ++HRDLKP+N +  T+     +K  DFGLA  F    + Y   
Sbjct: 114 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHE 170
Query: 179 VGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------- 230
           V T  Y APE LLG   Y   +DIWS G I   +++    F  +S    L  I       
Sbjct: 171 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
Query: 231 -------MSREIDFK-SDP-W---------PTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                  ++   D+K S P W         P +    + L+ +ML  DPN +I+    L 
Sbjct: 231 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 273 HPWLN 277
           HP+  
Sbjct: 291 HPFFQ 295

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 39/186 (20%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL--AFFFEEGKVYEEVVGTP 182
           ++  L  CH N I+HRDLKP+N +    ++   LK  DFGL  AF         EVV T 
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVNTFSSEVV-TL 172
Query: 183 LYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA------------------ESL 223
            Y AP+ L+G   Y   IDIWS G IL  +++G   F                    ESL
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESL 232
Query: 224 YGTLTAIMSREIDFKSDPWP-------------TISSSAKDLIRRMLIRDPNNQITVAQI 270
           + ++T +     + +  P P              +  +  D +  +L  +P+ +++  Q 
Sbjct: 233 WPSVTKLPKYNPNIQQRP-PRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA 291
Query: 271 LKHPWL 276
           L HPW 
Sbjct: 292 LHHPWF 297

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 120 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 175
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +D+WS G I+  +                      L
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 235
Query: 213 SGAQPFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 236 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 295
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 296 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 328

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 44/213 (20%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           ER +  +++ +    H  HS GI+HRDLKP N +  +D    TLK  DFGLA       +
Sbjct: 131 ERMSYLLYQMLCGIKH-LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM 186
Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNL----------------------L 212
               V T  Y APE++    Y + +D+WS G I+  +                      L
Sbjct: 187 MTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 246
Query: 213 SGAQPFWAESLYGTLTAIM---------SREIDFKSDPWPTIS-------SSAKDLIRRM 256
               P + + L  T+   +         S E  F    +P  S       S A+DL+ +M
Sbjct: 247 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 306
Query: 257 LIRDPNNQITVAQILKHPWLN--YENGEAWDRP 287
           L+ D + +I+V + L+HP++N  Y+  EA   P
Sbjct: 307 LVIDASKRISVDEALQHPYINVWYDPSEAEAPP 339

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 101/239 (42%), Gaps = 35/239 (14%)
Query: 66  YLCTENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSV 125
           ++  EN  GL           + ++ YL   H  G  L + I   ++ T+     +   +
Sbjct: 77  HMKHENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKXQKLTDDHVQFLIYQI 134
Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           +  L   HS  I+HRDLKP N     D E   LK  DFGLA   ++       V T  Y 
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLARHTDDEMT--GYVATRWYR 189
Query: 186 APE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSRE 234
           APE +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 235 IDFKS--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           I  +S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 46/260 (17%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-GY---------LK 94
           ED  L F +   L RG  G ++ C   +TG  +ACK ++K       GY         L 
Sbjct: 184 EDWFLDFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 95  REHC-----------------------DGGTLVDRI----SDRERYTERAAASVFRSVVN 127
           + H                        +GG +   I     D   + E  A      +V+
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE-VVGTPLYMA 186
            L   H   I++RDLKPEN +    D++  ++ +D GLA   + G+   +   GTP +MA
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 187 PELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP-TI 245
           PELL   +Y   +D ++ G+ LY +++   PF A         +  R ++ ++  +P   
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE-QAVTYPDKF 416
Query: 246 SSSAKDLIRRMLIRDPNNQI 265
           S ++KD    +L +DP  ++
Sbjct: 417 SPASKDFCEALLQKDPEKRL 436

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 46/260 (17%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSIS----------KTSKSDEGYLK 94
           ED  L F +   L RG  G ++ C   +TG  +ACK ++          + +  ++  L 
Sbjct: 184 EDWFLDFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 95  REHC-----------------------DGGTLVDRI----SDRERYTERAAASVFRSVVN 127
           + H                        +GG +   I     D   + E  A      +V+
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE-VVGTPLYMA 186
            L   H   I++RDLKPEN +    D++  ++ +D GLA   + G+   +   GTP +MA
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 187 PELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP-TI 245
           PELL   +Y   +D ++ G+ LY +++   PF A         +  R ++ ++  +P   
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE-QAVTYPDKF 416
Query: 246 SSSAKDLIRRMLIRDPNNQI 265
           S ++KD    +L +DP  ++
Sbjct: 417 SPASKDFCEALLQKDPEKRL 436

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 46/260 (17%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-GY---------LK 94
           ED  L F +   L RG  G ++ C   +TG  +ACK ++K       GY         L 
Sbjct: 184 EDWFLDFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 95  REHC-----------------------DGGTLVDRI----SDRERYTERAAASVFRSVVN 127
           + H                        +GG +   I     D   + E  A      +V+
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE-VVGTPLYMA 186
            L   H   I++RDLKPEN +    D++  ++ +D GLA   + G+   +   GTP +MA
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 187 PELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP-TI 245
           PELL   +Y   +D ++ G+ LY +++   PF A         +  R ++ ++  +P   
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE-QAVTYPDKF 416
Query: 246 SSSAKDLIRRMLIRDPNNQI 265
           S ++KD    +L +DP  ++
Sbjct: 417 SPASKDFCEALLQKDPEKRL 436

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 46/260 (17%)
Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSIS----------KTSKSDEGYLK 94
           ED  L F +   L RG  G ++ C   +TG  +ACK ++          + +  ++  L 
Sbjct: 184 EDWFLDFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 95  REHC-----------------------DGGTLVDRI----SDRERYTERAAASVFRSVVN 127
           + H                        +GG +   I     D   + E  A      +V+
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE-VVGTPLYMA 186
            L   H   I++RDLKPEN +    D++  ++ +D GLA   + G+   +   GTP +MA
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 187 PELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP-TI 245
           PELL   +Y   +D ++ G+ LY +++   PF A         +  R ++ ++  +P   
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE-QAVTYPDKF 416
Query: 246 SSSAKDLIRRMLIRDPNNQI 265
           S ++KD    +L +DP  ++
Sbjct: 417 SPASKDFCEALLQKDPEKRL 436

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 106/267 (39%), Gaps = 38/267 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL       +   + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 167
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 168 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 222
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM---------------SR 233
           +L    Y   +DIWS G I+  LL+G   F        L  IM               S 
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSH 282
Query: 234 EIDFKSDPWPTISSS------------AKDLIRRMLIRDPNNQITVAQILKHPWLNY--- 278
           E     +  P +               A DL+ +ML+ D + +IT ++ L HP+ +    
Sbjct: 283 EARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHD 342
Query: 279 ENGEAWDRPIDTAIISRVKQFRAMSKL 305
            + E    P D +  SR  +     +L
Sbjct: 343 PDDEPESEPYDQSFESRQLEIEEWKRL 369

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-----EEGKVYEEVV 179
           ++  L   HS  ++HRDLKP N +    +EN  LK  DFG+A        E      E V
Sbjct: 167 LLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYV 223
Query: 180 GTPLYMAPEL-LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------- 231
            T  Y APEL L   +Y + ID+WS G I   +L+  Q F  ++    L  IM       
Sbjct: 224 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS 283
Query: 232 ---------SREIDF-------KSDPWPTISSSAK----DLIRRMLIRDPNNQITVAQIL 271
                     R   +       +  PW T+   A      L+ RML  +P+ +I+ A  L
Sbjct: 284 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAAL 343
Query: 272 KHPWL 276
           +HP+L
Sbjct: 344 RHPFL 348

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 83  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N     D E   LK  DFGLA   ++       V T  Y APE 
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDSE---LKILDFGLARHTDDEMT--GYVATRWYRAPEI 195
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 87  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N     D E   LK  DFGLA   ++       V T  Y APE 
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDSE---LKILDFGLARHTDDEMT--GYVATRWYRAPEI 199
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 92  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N     D E   LK  DFGLA   ++       V T  Y APE 
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLARHTDDEMT--GYVATRWYRAPEI 204
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 264
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 265 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 86  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N     D E   LK  DFGLA   ++       V T  Y APE 
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLARHTDDEMT--GYVATRWYRAPEI 198
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA--TDFGLAFFFEEGK---- 173
           ++ +   + L   HS  I+HRDLKP N + +  + +  +KA  +DFGL      G+    
Sbjct: 122 TLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFS 181
Query: 174 VYEEVVGTPLYMAPELLGP-CKYGK--EIDIWSAGLILYNLLS-GAQPFWAESLYGTLTA 229
               V GT  ++APE+L   CK      +DI+SAG + Y ++S G+ PF  +SL      
Sbjct: 182 RRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF-GKSLQRQANI 240
Query: 230 IMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           ++         P       A++LI +M+  DP  + +   +LKHP+ 
Sbjct: 241 LLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++  L   HS GI+HRDLKP N     D E   L+  DFGLA   +E       V T  Y
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSE---LRILDFGLARQADEEMT--GYVATRWY 194
Query: 185 MAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------SREIDF 237
            APE +L    Y + +DIWS G I+  LL G   F        L  IM      S E+  
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLA 254
Query: 238 KSD------------PWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           K              P P    S         A DL+ RML+ D + +++ A+ L H + 
Sbjct: 255 KISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
Query: 277 N 277
           +
Sbjct: 315 S 315

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 86  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N     D E   LK  DFGLA   ++       V T  Y APE 
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLARHTDDEMT--GYVATRWYRAPEI 198
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 81  SISKTSKSDEGYLKREHCDGG---TLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
           +I + + +    L  E C  G   T+++  S+     E     V R VV  ++    NGI
Sbjct: 74  AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 138 MHRDLKPENFI-FTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPC--- 193
           +HR++KP N +    +D  +  K TDFG A   E+ + +  + GT  Y+ P++       
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLR 193
Query: 194 -----KYGKEIDIWSAGLILYNLLSGAQPF 218
                KYG  +D+WS G+  Y+  +G+ PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++  L   HS GI+HRDLKP N     D E   L+  DFGLA   +E       V T  Y
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSE---LRILDFGLARQADEEMT--GYVATRWY 194
Query: 185 MAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------SREIDF 237
            APE +L    Y + +DIWS G I+  LL G   F        L  IM      S E+  
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLA 254
Query: 238 KSD------------PWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           K              P P    S         A DL+ RML+ D + +++ A+ L H + 
Sbjct: 255 KISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
Query: 277 N 277
           +
Sbjct: 315 S 315

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 107/257 (41%), Gaps = 38/257 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKSQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N     D E   LK  DFGL    ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDSE---LKILDFGLCRHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL---NY 278
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H +    + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 279 ENGEAWDRPIDTAIISR 295
            + E    P D ++ SR
Sbjct: 314 PDDEPVADPYDQSLESR 330

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-----EEGKVYEEVV 179
           ++  L   HS  ++HRDLKP N +    +EN  LK  DFG+A        E      E V
Sbjct: 168 LLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYV 224
Query: 180 GTPLYMAPEL-LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------- 231
            T  Y APEL L   +Y + ID+WS G I   +L+  Q F  ++    L  IM       
Sbjct: 225 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS 284
Query: 232 ---------SREIDF-------KSDPWPTISSSAK----DLIRRMLIRDPNNQITVAQIL 271
                     R   +       +  PW T+   A      L+ RML  +P+ +I+ A  L
Sbjct: 285 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAAL 344
Query: 272 KHPWL 276
           +HP+L
Sbjct: 345 RHPFL 349

>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 311 KVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADI 370
           K + E L  EEI   KE FK +DT++SGT+T+DE K GL ++GS L E ++K  M AADI
Sbjct: 11  KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 371 DGNGT 375
           D +GT
Sbjct: 71  DKSGT 75

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 108/257 (42%), Gaps = 38/257 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL---NY 278
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H +    + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 279 ENGEAWDRPIDTAIISR 295
            + E    P D +  SR
Sbjct: 314 PDDEPVADPFDQSFESR 330

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 81  SISKTSKSDEGYLKREHCDGG---TLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
           +I + + +    L  E C  G   T+++  S+     E     V R VV  ++    NGI
Sbjct: 74  AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 138 MHRDLKPENFI-FTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPC--- 193
           +HR++KP N +    +D  +  K TDFG A   E+ + +  + GT  Y+ P++       
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLR 193
Query: 194 -----KYGKEIDIWSAGLILYNLLSGAQPF 218
                KYG  +D+WS G+  Y+  +G+ PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 162 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 216
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 276
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 277 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GXVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 86  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 144 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 198
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 83  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 141 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 195
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMA--GFVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 93  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 151 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 205
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 92  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 150 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 204
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 264
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 265 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 87  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 145 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 199
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 78  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 136 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 190
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 250
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 251 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 83  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 141 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 195
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 87  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 145 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 199
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 86  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 144 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 198
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMA--GFVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 80  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 137
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 138 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 192
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 252
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 253 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 93  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 151 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 205
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 110/258 (42%), Gaps = 40/258 (15%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 88  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPE 188
              HS  I+HRDLKP N      +E+  LK  DFGLA    +E   Y   V T  Y APE
Sbjct: 146 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTADEMTGY---VATRWYRAPE 199
Query: 189 -LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDF 237
            +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 238 KS--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL---N 277
           +S           P ++ +         A DL+ +ML+ D + +IT AQ L H +    +
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319
Query: 278 YENGEAWDRPIDTAIISR 295
             + E    P D ++ SR
Sbjct: 320 DPDDEPVADPYDQSLESR 337

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 93  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 151 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 205
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 88  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 146 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 200
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 78  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 136 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 190
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 250
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 251 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 94/243 (38%), Gaps = 45/243 (18%)
Query: 70  ENSTGLQFACKSISKTSKSDEG--YLKREHCD---GGTLVDRISDRERYTERAAASVFRS 124
           EN   L   C++ +      +G  YL  + C+    G L + +    ++T      V + 
Sbjct: 77  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQM 133
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-----VYEEVV 179
           ++N L+  H N I+HRD+K  N + T D     LK  DFGLA  F   K      Y   V
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 180 GTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK 238
            T  Y  PE LLG   YG  ID+W AG I+  + + +      +    L  I        
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 239 SDPWPTISS----------------------------SAKDLIRRMLIRDPNNQITVAQI 270
            + WP + +                             A DLI ++L+ DP  +I     
Sbjct: 251 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 310
Query: 271 LKH 273
           L H
Sbjct: 311 LNH 313

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 162 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDE--MXGYVATRWYRAPEI 216
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 276
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 277 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 77  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 135 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 189
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 94/243 (38%), Gaps = 45/243 (18%)
Query: 70  ENSTGLQFACKSISKTSKSDEG--YLKREHCD---GGTLVDRISDRERYTERAAASVFRS 124
           EN   L   C++ +      +G  YL  + C+    G L + +    ++T      V + 
Sbjct: 76  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQM 132
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-----VYEEVV 179
           ++N L+  H N I+HRD+K  N + T D     LK  DFGLA  F   K      Y   V
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 180 GTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK 238
            T  Y  PE LLG   YG  ID+W AG I+  + + +      +    L  I        
Sbjct: 190 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249
Query: 239 SDPWPTISS----------------------------SAKDLIRRMLIRDPNNQITVAQI 270
            + WP + +                             A DLI ++L+ DP  +I     
Sbjct: 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 309
Query: 271 LKH 273
           L H
Sbjct: 310 LNH 312

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 66  YLCTENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSV 125
           ++  EN  GL           + ++ YL   H  G  L + I   ++ T+     +   +
Sbjct: 83  HMKHENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQI 140
Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           +  L   HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y 
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYR 195
Query: 186 APE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSRE 234
           APE +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 255
Query: 235 IDFKS--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           I  +S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 256 ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 158 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 212
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 273 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 159 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 213
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 274 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 79  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 136
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 137 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 191
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 251
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 252 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 77  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 135 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMA--GFVATRWYRAPEI 189
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 91  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 148
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 149 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 203
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 263
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 264 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 83  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 141 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 195
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 94/243 (38%), Gaps = 45/243 (18%)
Query: 70  ENSTGLQFACKSISKTSKSDEG--YLKREHCD---GGTLVDRISDRERYTERAAASVFRS 124
           EN   L   C++ +      +G  YL  + C+    G L + +    ++T      V + 
Sbjct: 77  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQM 133
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-----VYEEVV 179
           ++N L+  H N I+HRD+K  N + T D     LK  DFGLA  F   K      Y   V
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 180 GTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK 238
            T  Y  PE LLG   YG  ID+W AG I+  + + +      +    L  I        
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 239 SDPWPTISS----------------------------SAKDLIRRMLIRDPNNQITVAQI 270
            + WP + +                             A DLI ++L+ DP  +I     
Sbjct: 251 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 310
Query: 271 LKH 273
           L H
Sbjct: 311 LNH 313

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 77  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 135 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 189
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 159 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDE--MXGXVATRWYRAPEI 213
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 159 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 213
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 101/236 (42%), Gaps = 37/236 (15%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 88  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPE 188
              HS  I+HRDLKP N      +E+  LK  DFGLA    +E   Y   V T  Y APE
Sbjct: 146 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTADEMTGY---VATRWYRAPE 199
Query: 189 -LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDF 237
            +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 238 KS--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           +S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 84/223 (37%), Gaps = 71/223 (31%)
Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF----------- 169
           V   ++  +   HS G++HRD+KP N +   +     +K  DFGL+  F           
Sbjct: 114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNAE---CHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 170 -----------EEGKVYEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQP 217
                      ++  +  + V T  Y APE LLG  KY K ID+WS G IL  +L G   
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
Query: 218 FWAESLYGTLTAIMSREIDFKS-------------------------------------- 239
           F   S    L  I+   IDF S                                      
Sbjct: 231 FPGSSTMNQLERIIG-VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWK 289
Query: 240 ------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                 +P    +  A DL+ ++L  +PN +I+    LKHP++
Sbjct: 290 NLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFV 332

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 76/196 (38%), Gaps = 37/196 (18%)
Query: 112 RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE 171
           ++T      V + ++N L+  H N I+HRD+K  N + T D     LK  DFGLA  F  
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAFSL 177
Query: 172 GK-----VYEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG 225
            K      Y   V T  Y  PE LLG   YG  ID+W AG I+  + + +      +   
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 237
Query: 226 TLTAIMSREIDFKSDPWPTISS----------------------------SAKDLIRRML 257
            L  I         + WP + +                             A DLI ++L
Sbjct: 238 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL 297
Query: 258 IRDPNNQITVAQILKH 273
           + DP  +I     L H
Sbjct: 298 VLDPAQRIDSDDALNH 313

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++  L   HS GI+HRDLKP N     D E   L+  DFGLA   +E       V T  Y
Sbjct: 132 LLRGLKYIHSAGIIHRDLKPSNVAVNEDCE---LRILDFGLARQADEEMT--GYVATRWY 186
Query: 185 MAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------SREIDF 237
            APE +L    Y + +DIWS G I+  LL G   F        L  IM      S E+  
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLA 246
Query: 238 KSD------------PWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           K              P P    S         A DL+ RML+ D + +++ A+ L H + 
Sbjct: 247 KISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 306
Query: 277 N 277
           +
Sbjct: 307 S 307

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 158 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 212
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 273 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 22/181 (12%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFR----SVVNALHACHSNGIMHRDLKPENF 147
           YL  E+  GG L+  +S   ++ ER  A + R     +V A+ + H  G +HRD+KP+N 
Sbjct: 137 YLVMEYYVGGDLLTLLS---KFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNI 193
Query: 148 IFTTDDENATLKATDFGLAFFFE-EGKVYEEV-VGTPLYMAPELLGPCKYG-------KE 198
           +    D    ++  DFG       +G V   V VGTP Y++PE+L     G        E
Sbjct: 194 LL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPE 250
Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW--PTISSSAKDLIRRM 256
            D W+ G+  Y +  G  PF+A+S   T   I+  + +  S P     +   A+D I+R+
Sbjct: 251 CDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK-EHLSLPLVDEGVPEEARDFIQRL 309
Query: 257 L 257
           L
Sbjct: 310 L 310

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 101/236 (42%), Gaps = 37/236 (15%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 88  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPE 188
              HS  I+HRDLKP N      +E+  LK  DFGLA    +E   Y   V T  Y APE
Sbjct: 146 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTADEMTGY---VATRWYRAPE 199
Query: 189 -LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDF 237
            +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 238 KS--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           +S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFI------FTTDD----ENATLKATDFG 164
           E    S+ R + + +   HS  I+HRDLKP+N +      FT D     EN  +  +DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 165 LAFFFEEGKV-----YEEVVGTPLYMAPELLGPC---KYGKEIDIWSAGLILYNLLS-GA 215
           L    + G+           GT  + APELL      +  + IDI+S G + Y +LS G 
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 216 QPFW----AESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
            PF      ES    +  I S + + K     ++ + A DLI +M+  DP  + T  ++L
Sbjct: 252 HPFGDKYSRES--NIIRGIFSLD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 308
Query: 272 KHP 274
           +HP
Sbjct: 309 RHP 311

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 28/184 (15%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFI------FTTDD----ENATLKATDFG 164
           E    S+ R + + +   HS  I+HRDLKP+N +      FT D     EN  +  +DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 165 LAFFFEEGKV-----YEEVVGTPLYMAPELLGPC---KYGKEIDIWSAGLILYNLLS-GA 215
           L    + G+           GT  + APELL      +  + IDI+S G + Y +LS G 
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 216 QPFWAESLYGTLTAIMSREIDFKSDPWP-----TISSSAKDLIRRMLIRDPNNQITVAQI 270
            PF  +  Y   + I+ R I F  D        ++ + A DLI +M+  DP  + T  ++
Sbjct: 252 HPFGDK--YSRESNII-RGI-FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
Query: 271 LKHP 274
           L+HP
Sbjct: 308 LRHP 311

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL 183
           S++  L A H N I+H DLKPEN +      +  +K  DFG +  +E  +VY  +  +  
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFG-SSCYEHQRVYTXIQ-SRF 264
Query: 184 YMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP 243
           Y APE++   +YG  ID+WS G IL  LL+G  P       G   A M   +   S    
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGY-PLLPGEDEGDQLACMIELLGMPSQKLL 323
Query: 244 TISSSAKDLI 253
             S  AK+ +
Sbjct: 324 DASKRAKNFV 333

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL 183
           S++  L A H N I+H DLKPEN +      +  +K  DFG +  +E  +VY  +  +  
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFG-SSCYEHQRVYTXIQ-SRF 264
Query: 184 YMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP 243
           Y APE++   +YG  ID+WS G IL  LL+G  P       G   A M   +   S    
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGY-PLLPGEDEGDQLACMIELLGMPSQKLL 323
Query: 244 TISSSAKDLI 253
             S  AK+ +
Sbjct: 324 DASKRAKNFV 333

>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 2   DQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      LNL   + KDT  ++     F +F K  N         +I+A EL       N
Sbjct: 62  TIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGN--------GFISAAELRHVMT--N 111
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 112 LGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDDE 154
           EH DGG+L   + + +R  E     V  +V+  L +    + IMHRD+KP N +  +  E
Sbjct: 94  EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE 153
Query: 155 NATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
              +K  DFG++     G++ + +    VGT  YMAPE L    Y  + DIWS GL L  
Sbjct: 154 ---IKLCDFGVS-----GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVE 205
Query: 211 LLSGAQPFWAESLYGTLTAIMSREI 235
           L  G  P         L AI  R +
Sbjct: 206 LAVGRYPIPPPDAK-ELEAIFGRPV 229

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  D+GLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDYGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 2   DQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      LNL   + KDT  ++     F +F K  N         +I+A EL       N
Sbjct: 62  TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGN--------GFISAAELRHVMT--N 111
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 112 LGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 115 ERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           E     +  + V AL+    N  I+HRD+KP N +    D +  +K  DFG++    +  
Sbjct: 124 EEILGKITLATVKALNHLKENLKIIHRDIKPSNILL---DRSGNIKLCDFGISGQLVDSI 180
Query: 174 VYEEVVGTPLYMAPELLGPCK----YGKEIDIWSAGLILYNLLSGAQPF--WAESLYGTL 227
                 G   YMAPE + P      Y    D+WS G+ LY L +G  P+  W  S++  L
Sbjct: 181 AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW-NSVFDQL 239
Query: 228 TAIMSREIDFKSDPWPTISSSAK--------DLIRRMLIRDPNNQITVAQILKHPW-LNY 278
           T ++      K DP P +S+S +        + +   L +D + +    ++LKHP+ L Y
Sbjct: 240 TQVV------KGDP-PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292
Query: 279 E 279
           E
Sbjct: 293 E 293

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I    + T+     +   ++  L
Sbjct: 77  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCAKLTDDHVQFLIYQILRGL 134
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DFGLA   ++       V T  Y APE 
Sbjct: 135 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 189
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL 183
           S++  L A H N I+H DLKPEN +      +  +K  DFG +  +E  +VY  +  +  
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFG-SSCYEHQRVYXXIQ-SRF 264
Query: 184 YMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
           Y APE++   +YG  ID+WS G IL  LL+G
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTG 295

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 53/235 (22%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDDE 154
           EH DGG+L   +    R  E+    V  +V+  L +    + IMHRD+KP N +  +  E
Sbjct: 146 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 205
Query: 155 NATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
              +K  DFG++     G++ + +    VGT  YM+PE L    Y  + DIWS GL L  
Sbjct: 206 ---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 257
Query: 211 LLSGAQPFWA------ESLYG----------------TLTAIMSREIDFK---------- 238
           +  G  P         E ++G                    + S  +D +          
Sbjct: 258 MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLD 317
Query: 239 ---SDPWPTISSSA-----KDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWD 285
              ++P P + S+      +D + + LI++P  +  + Q++ H ++   + E  D
Sbjct: 318 YIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 372

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 28/177 (15%)
Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
           A+   HS GI HRD+KP+N +  + D   TLK  DFG A      +     + +  Y AP
Sbjct: 153 AVGFIHSLGICHRDIKPQNLLVNSKDN--TLKLCDFGSAKKLIPSEPSVAXICSRFYRAP 210
Query: 188 EL-LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------SREIDFKSD 240
           EL LG  +Y   ID+WS G +   L+ G   F  E+    L  I+      ++E   + +
Sbjct: 211 ELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMN 270
Query: 241 P------WPTI-------------SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY 278
           P      +PT+              S A DL+ ++L  +P+ +I   + + HP+ ++
Sbjct: 271 PHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 79/196 (40%), Gaps = 32/196 (16%)
Query: 116 RAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD--ENATLKATDFGL--AFFFEE 171
           R   S    ++N ++ CHS   +HRDLKP+N + +  D  E   LK  DFGL  AF    
Sbjct: 132 RVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI 191
Query: 172 GKVYEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI 230
            +   E++ T  Y  PE LLG   Y   +DIWS   I   +L     F  +S    L  I
Sbjct: 192 RQFTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKI 250
Query: 231 MSREIDFKSDPWPTISS-----------SAKDLIR---------------RMLIRDPNNQ 264
                      WP +++             K L R                ML  DP  +
Sbjct: 251 FEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKR 310
Query: 265 ITVAQILKHPWLNYEN 280
           I+    L+HP+ ++ +
Sbjct: 311 ISAKNALEHPYFSHND 326

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 53/235 (22%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDDE 154
           EH DGG+L   +    R  E+    V  +V+  L +    + IMHRD+KP N +  +  E
Sbjct: 111 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 170
Query: 155 NATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
              +K  DFG++     G++ + +    VGT  YM+PE L    Y  + DIWS GL L  
Sbjct: 171 ---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 222
Query: 211 LLSGAQPFWA------ESLYGTLT---------------------AIMSRE-------ID 236
           +  G  P         E ++G                         + SR        +D
Sbjct: 223 MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLD 282
Query: 237 F-KSDPWPTISSSA-----KDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWD 285
           +  ++P P + S       +D + + LI++P  +  + Q++ H ++   + E  D
Sbjct: 283 YIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 337

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 30/187 (16%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFI------FTTDD----ENATLKATDFG 164
           E    S+ R + + +   HS  I+HRDLKP+N +      FT D     EN  +  +DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 165 LAFFFEEGKV-----YEEVVGTPLYMAPELLGPC-------KYGKEIDIWSAGLILYNLL 212
           L    + G+           GT  + APELL          +  + IDI+S G + Y +L
Sbjct: 174 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 213 S-GAQPFW----AESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           S G  PF      ES    +  I S + + K     ++ + A DLI +M+  DP  + T 
Sbjct: 234 SKGKHPFGDKYSRES--NIIRGIFSLD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Query: 268 AQILKHP 274
            ++L+HP
Sbjct: 291 MKVLRHP 297

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 53/235 (22%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDDE 154
           EH DGG+L   +    R  E+    V  +V+  L +    + IMHRD+KP N +  +  E
Sbjct: 84  EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 155 NATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
              +K  DFG++     G++ + +    VGT  YM+PE L    Y  + DIWS GL L  
Sbjct: 144 ---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 211 LLSGAQPFWA------ESLYG----------------TLTAIMSREIDFK---------- 238
           +  G  P         E ++G                    + S  +D +          
Sbjct: 196 MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLD 255
Query: 239 ---SDPWPTISSSA-----KDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWD 285
              ++P P + S       +D + + LI++P  +  + Q++ H ++   + E  D
Sbjct: 256 YIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 310

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 53/235 (22%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDDE 154
           EH DGG+L   +    R  E+    V  +V+  L +    + IMHRD+KP N +  +  E
Sbjct: 84  EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 155 NATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
              +K  DFG++     G++ + +    VGT  YM+PE L    Y  + DIWS GL L  
Sbjct: 144 ---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 211 LLSGAQPFWA------ESLYG----------------TLTAIMSREIDFK---------- 238
           +  G  P         E ++G                    + S  +D +          
Sbjct: 196 MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLD 255
Query: 239 ---SDPWPTISSSA-----KDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWD 285
              ++P P + S       +D + + LI++P  +  + Q++ H ++   + E  D
Sbjct: 256 YIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 310

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 84/205 (40%), Gaps = 35/205 (17%)
Query: 101 GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA 160
           GT + ++   E+  E     +   ++  L   H+ GI+HRDLKP N      +E+  LK 
Sbjct: 113 GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKI 169
Query: 161 TDFGLAFFFEEGKVYEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFW 219
            DFGLA   +        V T  Y APE +L   +Y + +DIWS G I+  +++G   F 
Sbjct: 170 LDFGLA--RQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK 227
Query: 220 AESLYGTLTAIMS----------------------------REIDFKSDPWPTISSSAKD 251
                  L  IM                              + DF S      S  A +
Sbjct: 228 GSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASI-LTNASPLAVN 286
Query: 252 LIRRMLIRDPNNQITVAQILKHPWL 276
           L+ +ML+ D   ++T  + L HP+ 
Sbjct: 287 LLEKMLVLDAEQRVTAGEALAHPYF 311

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 53/235 (22%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDDE 154
           EH DGG+L   +    R  E+    V  +V+  L +    + IMHRD+KP N +  +  E
Sbjct: 84  EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 155 NATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
              +K  DFG++     G++ + +    VGT  YM+PE L    Y  + DIWS GL L  
Sbjct: 144 ---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 211 LLSGAQPFWA------ESLYG----------------TLTAIMSREIDFK---------- 238
           +  G  P         E ++G                    + S  +D +          
Sbjct: 196 MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLD 255
Query: 239 ---SDPWPTISSSA-----KDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWD 285
              ++P P + S       +D + + LI++P  +  + Q++ H ++   + E  D
Sbjct: 256 YIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 310

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 30/187 (16%)
Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFI------FTTDD----ENATLKATDFG 164
           E    S+ R + + +   HS  I+HRDLKP+N +      FT D     EN  +  +DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 165 LAFFFEEGKV-----YEEVVGTPLYMAPELLGPC-------KYGKEIDIWSAGLILYNLL 212
           L    + G+           GT  + APELL          +  + IDI+S G + Y +L
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 213 S-GAQPFW----AESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           S G  PF      ES    +  I S + + K     ++ + A DLI +M+  DP  + T 
Sbjct: 234 SKGKHPFGDKYSRES--NIIRGIFSLD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Query: 268 AQILKHP 274
            ++L+HP
Sbjct: 291 MKVLRHP 297

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK   FGLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILGFGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 22/196 (11%)
Query: 99  DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL 158
           +GG+L   + ++    E  A       +  L   HS  I+H D+K +N + ++D  +A L
Sbjct: 149 EGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAAL 208
Query: 159 KATDFGLAFFFEEGKVYEEVV------GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLL 212
              DFG A   +   + ++++      GT  +MAPE++       ++D+WS+  ++ ++L
Sbjct: 209 --CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 266
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI-- 270
           +G  P W +   G L   ++ E     +  P+ +      I+  L ++P ++++ A++  
Sbjct: 267 NGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGG 325
Query: 271 -----------LKHPW 275
                      LK PW
Sbjct: 326 KVNRALQQVGGLKSPW 341

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 53/235 (22%)
Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDDE 154
           EH DGG+L   +    R  E+    V  +V+  L +    + IMHRD+KP N +  +  E
Sbjct: 84  EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 155 NATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
              +K  DFG++     G++ + +    VGT  YM+PE L    Y  + DIWS GL L  
Sbjct: 144 ---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 211 LLSGAQPFWA------ESLYG----------------TLTAIMSREIDFK---------- 238
           +  G  P         E ++G                    + S  +D +          
Sbjct: 196 MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLD 255
Query: 239 ---SDPWPTISSSA-----KDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWD 285
              ++P P + S       +D + + LI++P  +  + Q++ H ++   + E  D
Sbjct: 256 YIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 310

>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + KDT  ++     F +F K  N         YI+A EL       N
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--N 413
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 414 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 447

>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + KDT  ++     F +F K  N         YI+A EL       N
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--N 412
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 413 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446

>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + KDT  ++     F +F K  N         YI+A EL       N
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--N 412
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 413 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446

>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + KDT  ++     F +F K  N         YI+A EL       N
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--N 378
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 379 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 412

>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + KDT  ++     F +F K  N         YI+A EL       N
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--N 378
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 379 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 412

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++  LH  H  G++HRDL P N +     +N  +   DF LA            V    Y
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTHYVTHRWY 199
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS-------REID 236
            APEL+   K + K +D+WSAG ++  + +    F   + Y  L  I+         ++ 
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVV 259
Query: 237 FKSDP-----------------W----PTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
             S P                 W    PT    A DLI +ML  +P  +I+  Q L+HP+
Sbjct: 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319
Query: 276 L 276
Sbjct: 320 F 320

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++  LH  H  G++HRDL P N +     +N  +   DF LA            V    Y
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTHYVTHRWY 199
Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS-------REID 236
            APEL+   K + K +D+WSAG ++  + +    F   + Y  L  I+         ++ 
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVV 259
Query: 237 FKSDP-----------------W----PTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
             S P                 W    PT    A DLI +ML  +P  +I+  Q L+HP+
Sbjct: 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319
Query: 276 L 276
Sbjct: 320 F 320

>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + KDT  ++     F +F K  N         YI+A EL       N
Sbjct: 326 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--N 375
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 376 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 409

>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 23/152 (15%)
Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT 376
           L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNGT 
Sbjct: 1   LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 377 -----LNLSLVQCKDTS----LKD-FNIFTKPSNILIRIMISIYITADELEAAFKEYNMG 426
                LNL   + KDT     LK+ F +F K  N         +I+A EL       N+G
Sbjct: 61  DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGN--------GFISAAELRHVM--TNLG 110
Query: 427 D---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +   D  + E++ E D D DG+++YEEF   M
Sbjct: 111 EKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 142

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 22/196 (11%)
Query: 99  DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL 158
           +GG+L   + ++    E  A       +  L   HS  I+H D+K +N + ++D  +A L
Sbjct: 168 EGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAAL 227
Query: 159 KATDFGLAFFFEEGKVYEEVV------GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLL 212
              DFG A   +   + + ++      GT  +MAPE++       ++D+WS+  ++ ++L
Sbjct: 228 --CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 285
Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI-- 270
           +G  P W +   G L   ++ E     +  P+ +      I+  L ++P ++++ A++  
Sbjct: 286 NGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGG 344
Query: 271 -----------LKHPW 275
                      LK PW
Sbjct: 345 KVNRALQQVGGLKSPW 360

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  DF LA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDFYLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 14/193 (7%)
Query: 101 GTLVDRISDRER--YTERAAASVFRSVVNALHAC-HSNGIMHRDLKPENFIFTTDDENAT 157
           GT  +++  R +    ER    +  ++V AL+     +G++HRD+KP N +    DE   
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQ 163
Query: 158 LKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP-----CKYGKEIDIWSAGLILYNLL 212
           +K  DFG++    + K  +   G   YMAPE + P       Y    D+WS G+ L  L 
Sbjct: 164 IKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA 223
Query: 213 SGAQPFW-AESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           +G  P+   ++ +  LT ++  E           S   +  ++  L +D   +    ++L
Sbjct: 224 TGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM-GFSGDFQSFVKDCLTKDHRKRPKYNKLL 282
Query: 272 KHPWLN-YENGEA 283
           +H ++  YE  E 
Sbjct: 283 EHSFIKRYETLEV 295

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  D GLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDAGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  D GLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDRGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           NGT      L +   + KDT  ++     F +F K  N         YI+A EL      
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVM-- 110
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
            N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 111 TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 98  CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           C+G +L   +   E ++  +    + R     +   H+  I+HRDLK  N     D+   
Sbjct: 89  CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDN--- 145
Query: 157 TLKATDFGLAFF---FEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYN 210
           T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++LY 
Sbjct: 146 TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 205
Query: 211 LLSGAQPF 218
           L++G  P+
Sbjct: 206 LMTGQLPY 213

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 70  ENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
           EN  GL           + ++ YL   H  G  L + I   ++ T+     +   ++  L
Sbjct: 81  ENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE- 188
              HS  I+HRDLKP N      +E+  LK  D GLA   ++       V T  Y APE 
Sbjct: 139 KYIHSADIIHRDLKPSNLAV---NEDCELKILDGGLARHTDDEMT--GYVATRWYRAPEI 193
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGTLTAIMSREIDFK 238
           +L    Y + +DIWS G I+  LL+G   F              L GT  A + ++I  +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 239 S--------DPWPTISSS---------AKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S           P ++ +         A DL+ +ML+ D + +IT AQ L H + 
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +     KDT  ++     F +F K  N         YI+A EL       N
Sbjct: 363 TIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--N 412
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 413 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 83/210 (39%), Gaps = 58/210 (27%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDE----------------NATLKATDFGLAF 167
            +  +++  HSN + H DLKPEN +F   D                 N  +K  DFG A 
Sbjct: 126 QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185
Query: 168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPF--------- 218
           + +E   +  +V T  Y APE++    + +  D+WS G IL     G   F         
Sbjct: 186 YDDEH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 219 -WAESLYGTLTAIMSREID----FKSD--PWPTISSSAK--------------------- 250
              E + G L   M ++      F  D   W   SS+ +                     
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 251 ---DLIRRMLIRDPNNQITVAQILKHPWLN 277
              DLI++ML  DP  +IT+ + LKHP+ +
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPFFD 333

>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           NGT      L +   + KDT  ++     F +F K  N         YI+A EL      
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT- 111
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
            N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 112 -NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146

>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 312 VIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADID 371
            + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D D
Sbjct: 3   AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 372 GNGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFK 421
           GNGT      L +   + KDT  ++     F +F K  N         YI+A EL     
Sbjct: 63  GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT 114
Query: 422 EYNMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
             N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 115 --NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 149

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 98  CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           C+G +L   +   E ++  +    + R     +   H+  I+HRDLK  N     D+   
Sbjct: 101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDN--- 157
Query: 157 TLKATDFGLAF---FFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYN 210
           T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++LY 
Sbjct: 158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 217
Query: 211 LLSGAQPF 218
           L++G  P+
Sbjct: 218 LMTGQLPY 225

>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG
Sbjct: 2   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           NGT      L +   + KDT  ++     F +F K  N         YI+A EL      
Sbjct: 62  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT- 112
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
            N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 113 -NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 147

>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 23/158 (14%)
Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           NGT      L +   + KDT  ++     F +F K  N         +I+A EL      
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GFISAAELRHVM-- 110
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATMKT 457
            N+G+   D  + E++ E D D DG+++YEEF   M T
Sbjct: 111 TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTT 148

>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           NGT      L +   + KDT  ++     F +F K  N         YI+A EL      
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT- 111
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
            N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 112 -NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146

>pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           NGT      L +   + KDT  ++     F +F K  N         YI+A EL      
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT- 111
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
            N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 112 -NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 82/209 (39%), Gaps = 58/209 (27%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDD----------------ENATLKATDFGLAF 167
            + +AL   H N + H DLKPEN +F   +                +N +++  DFG A 
Sbjct: 163 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 222
Query: 168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPF--------- 218
           F  E   +  +V T  Y  PE++    + +  D+WS G IL+    G   F         
Sbjct: 223 FDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
Query: 219 -WAESLYGTLTAIM-----SREIDFKSD-PWPTISSSAK--------------------- 250
              E + G + + M      ++  +K    W   SS  +                     
Sbjct: 281 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 340
Query: 251 ---DLIRRMLIRDPNNQITVAQILKHPWL 276
              DL+RRML  DP  +IT+A+ L HP+ 
Sbjct: 341 QLFDLMRRMLEFDPAQRITLAEALLHPFF 369

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 98  CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           C+G +L   +   E ++  +    + R     +   H+  I+HRDLK  N     D+   
Sbjct: 101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDN--- 157
Query: 157 TLKATDFGLAF---FFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYN 210
           T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++LY 
Sbjct: 158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 217
Query: 211 LLSGAQPF 218
           L++G  P+
Sbjct: 218 LMTGQLPY 225

>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG+G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + KDT  ++     F +F K  N         YI+A EL       N
Sbjct: 362 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--N 411
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 412 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 82/209 (39%), Gaps = 58/209 (27%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDD----------------ENATLKATDFGLAF 167
            + +AL   H N + H DLKPEN +F   +                +N +++  DFG A 
Sbjct: 140 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 199
Query: 168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPF--------- 218
           F  E   +  +V T  Y  PE++    + +  D+WS G IL+    G   F         
Sbjct: 200 FDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
Query: 219 -WAESLYGTLTAIM-----SREIDFKSD-PWPTISSSAK--------------------- 250
              E + G + + M      ++  +K    W   SS  +                     
Sbjct: 258 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 317
Query: 251 ---DLIRRMLIRDPNNQITVAQILKHPWL 276
              DL+RRML  DP  +IT+A+ L HP+ 
Sbjct: 318 QLFDLMRRMLEFDPAQRITLAEALLHPFF 346

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTD-DENATLKATDFGLAFFFEEG----KV 174
           S+   +++ +H  H+N ++HRDLKP N +   +  E   +K  D G A  F         
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 175 YEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPF 218
            + VV T  Y APE LLG   Y K IDIW+ G I   LL+    F
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236

>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGN
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 374 GTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           GT      L +   + KDT  ++     F +F K  N         YI+A EL       
Sbjct: 62  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT-- 111
Query: 424 NMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 112 NLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146

>pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 374 GTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           GT      L +   + KDT  ++     F +F K  N         YI+A EL       
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT-- 110
Query: 424 NMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 111 NLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145

>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 374 GTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           GT      L +   + KDT  ++     F +F K  N         YI+A EL       
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT-- 110
Query: 424 NMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 111 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 82/209 (39%), Gaps = 58/209 (27%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDD----------------ENATLKATDFGLAF 167
            + +AL   H N + H DLKPEN +F   +                +N +++  DFG A 
Sbjct: 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 190
Query: 168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPF--------- 218
           F  E   +  +V T  Y  PE++    + +  D+WS G IL+    G   F         
Sbjct: 191 FDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
Query: 219 -WAESLYGTLTAIM-----SREIDFKSD-PWPTISSSAK--------------------- 250
              E + G + + M      ++  +K    W   SS  +                     
Sbjct: 249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 308
Query: 251 ---DLIRRMLIRDPNNQITVAQILKHPWL 276
              DL+RRML  DP  +IT+A+ L HP+ 
Sbjct: 309 QLFDLMRRMLEFDPAQRITLAEALLHPFF 337

>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG+G
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 353
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + KDT  ++     F +F K  N         YI+A EL       N
Sbjct: 354 TIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--N 403
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 404 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 437

>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGN
Sbjct: 7   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 374 GTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           GT      L +   + KDT  ++     F +F K  N         YI+A EL       
Sbjct: 67  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT-- 116
Query: 424 NMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 117 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 151

>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 374 GTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           GT      L +   + KDT  ++     F +F K  N         YI+A EL       
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT-- 110
Query: 424 NMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 111 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145

>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 23/152 (15%)
Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT 376
           L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNGT 
Sbjct: 2   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 377 -----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMG 426
                L +   + KDT  ++     F +F K  N         YI+A EL       N+G
Sbjct: 62  DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--NLG 111
Query: 427 D---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +   D  + E++ E D D DG+++YEEF   M
Sbjct: 112 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143

>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 1   DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + KDT  ++     F +F K  N         YI+A EL       N
Sbjct: 61  TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--N 110
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 111 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 144

>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 23/152 (15%)
Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT 376
           L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNGT 
Sbjct: 1   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 377 -----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMG 426
                L +   + KDT  ++     F +F K  N         YI+A EL       N+G
Sbjct: 61  DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--NLG 110
Query: 427 D---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +   D  + E++ E D D DG+++YEEF   M
Sbjct: 111 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 142

>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 23/152 (15%)
Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT 376
           L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNGT 
Sbjct: 2   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 377 -----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMG 426
                L +   + KDT  ++     F +F K  N         YI+A EL       N+G
Sbjct: 62  DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--NLG 111
Query: 427 D---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +   D  + E++ E D D DG+++YEEF   M
Sbjct: 112 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 32/129 (24%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA----------FFFEEGK 173
           ++  AL   H  GI+HRD+KP NF++    +   L   DFGLA            F + +
Sbjct: 125 NLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQSE 182
Query: 174 VYEEV-------------------VGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLS 213
             +E                     GTP + APE+L  C      ID+WSAG+I  +LLS
Sbjct: 183 AQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242
Query: 214 GAQPFWAES 222
           G  PF+  S
Sbjct: 243 GRYPFYKAS 251

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 93  LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNA------LHACHSNGIMHRDLKPEN 146
           L  E+ +GG+L + +   E      AA      +        LH+     ++HRDLKP N
Sbjct: 76  LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135
Query: 147 FIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGL 206
            +         LK  DFG A   +      +  G+  +MAPE+     Y ++ D++S G+
Sbjct: 136 LLLVAG--GTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYSEKCDVFSWGI 191
Query: 207 ILYNLLSGAQPFWAESLYGTLTAIM------SREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           IL+ +++  +PF  + + G    IM      +R    K+ P P      + L+ R   +D
Sbjct: 192 ILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRPPLIKNLPKPI-----ESLMTRCWSKD 244
Query: 261 PNNQITVAQILK 272
           P+ + ++ +I+K
Sbjct: 245 PSQRPSMEEIVK 256

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 93  LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNA------LHACHSNGIMHRDLKPEN 146
           L  E+ +GG+L + +   E      AA      +        LH+     ++HRDLKP N
Sbjct: 77  LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 136
Query: 147 FIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGL 206
            +         LK  DFG A   +      +  G+  +MAPE+     Y ++ D++S G+
Sbjct: 137 LLLVAG--GTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYSEKCDVFSWGI 192
Query: 207 ILYNLLSGAQPFWAESLYGTLTAIM------SREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           IL+ +++  +PF  + + G    IM      +R    K+ P P      + L+ R   +D
Sbjct: 193 ILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRPPLIKNLPKPI-----ESLMTRCWSKD 245
Query: 261 PNNQITVAQILK 272
           P+ + ++ +I+K
Sbjct: 246 PSQRPSMEEIVK 257

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 99  DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL 158
           +GG L   +S    ++E         ++  L   H+  +++RDLKP N +    DE+  +
Sbjct: 275 NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHV 331
Query: 159 KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQP 217
           + +D GLA  F + K +   VGT  YMAPE+L     Y    D +S G +L+ LL G  P
Sbjct: 332 RISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
Query: 218 FWAESL-----YGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           F             +T  M+ E+        + S   + L+  +L RD N ++
Sbjct: 391 FRQHKTKDKHEIDRMTLTMAVELP------DSFSPELRSLLEGLLQRDVNRRL 437

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 99  DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL 158
           +GG L   +S    ++E         ++  L   H+  +++RDLKP N +    DE+  +
Sbjct: 275 NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHV 331
Query: 159 KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQP 217
           + +D GLA  F + K +   VGT  YMAPE+L     Y    D +S G +L+ LL G  P
Sbjct: 332 RISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
Query: 218 FWAESL-----YGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           F             +T  M+ E+        + S   + L+  +L RD N ++
Sbjct: 391 FRQHKTKDKHEIDRMTLTMAVELP------DSFSPELRSLLEGLLQRDVNRRL 437

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 99  DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL 158
           +GG L   +S    ++E         ++  L   H+  +++RDLKP N +    DE+  +
Sbjct: 275 NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHV 331
Query: 159 KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQP 217
           + +D GLA  F + K +   VGT  YMAPE+L     Y    D +S G +L+ LL G  P
Sbjct: 332 RISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
Query: 218 FWAESL-----YGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           F             +T  M+ E+        + S   + L+  +L RD N ++
Sbjct: 391 FRQHKTKDKHEIDRMTLTMAVELP------DSFSPELRSLLEGLLQRDVNRRL 437

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 99  DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL 158
           +GG L   +S    ++E         ++  L   H+  +++RDLKP N +    DE+  +
Sbjct: 274 NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHV 330
Query: 159 KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQP 217
           + +D GLA  F + K +   VGT  YMAPE+L     Y    D +S G +L+ LL G  P
Sbjct: 331 RISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
Query: 218 FWAESL-----YGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           F             +T  M+ E+        + S   + L+  +L RD N ++
Sbjct: 390 FRQHKTKDKHEIDRMTLTMAVELP------DSFSPELRSLLEGLLQRDVNRRL 436

>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           NGT      L +   + KDT  ++     F +F K  N         YI+A EL      
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT- 111
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
            N+G+   D  + +++ E D D DG+++YEEF   M
Sbjct: 112 -NLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMM 146

>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           NGT      L +   + KDT  ++     F +F K  N         +I+A EL      
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GFISAAELRHVM-- 110
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
            N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 111 TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146

>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  ++I + KE F   D +  G +T  E    +  LG   TE +++  +   D DG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 373 NGTT-----LNLSLVQCKDTS----LKD-FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           NGT      LNL   + KDT     LK+ F +F K  N         +I+A EL      
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN--------GFISAAELRHVM-- 110
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
            N+G+   D  + E++ E D D DG+I+YEEF   M
Sbjct: 111 TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146

>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + K T  ++     F +F K  N         YI+A EL       N
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--N 412
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 413 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446

>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT--- 376
           E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNGT    
Sbjct: 5   EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 377 --LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMGD-- 427
             L +   + KDT  ++     F +F K  N         YI+A EL       N+G+  
Sbjct: 65  EFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--NLGEKL 114
Query: 428 -DATIKEIMFEVDRDKDGRISYEEFCATM 455
            D  + E++ E D D DG+++YEEF   M
Sbjct: 115 TDEEVDEMIREADIDGDGQVNYEEFVQMM 143

>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT--- 376
           E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNGT    
Sbjct: 3   EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 377 --LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMGD-- 427
             L +   + KDT  ++     F +F K  N         YI+A EL       N+G+  
Sbjct: 63  EFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--NLGEKL 112
Query: 428 -DATIKEIMFEVDRDKDGRISYEEFCATM 455
            D  + E++ E D D DG+++YEEF   M
Sbjct: 113 TDEEVDEMIREADIDGDGQVNYEEFVQMM 141

>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 374 GTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           GT      L +   + KDT  ++     F +F K  N         +I+A EL       
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GFISAAELRHVM--T 110
Query: 424 NMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 111 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 145

>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 374 GTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           GT      L +   + KDT  ++     F +F K  N         +I+A EL       
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GFISAAELRHVM--T 110
Query: 424 NMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 111 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 145

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 82/210 (39%), Gaps = 58/210 (27%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDE----------------NATLKATDFGLAF 167
            +  +++  HSN + H DLKPEN +F   D                 N  +K  DFG A 
Sbjct: 126 QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185
Query: 168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPF--------- 218
           + +E   +  +V    Y APE++    + +  D+WS G IL     G   F         
Sbjct: 186 YDDEH--HSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 219 -WAESLYGTLTAIMSREID----FKSD--PWPTISSSAK--------------------- 250
              E + G L   M ++      F  D   W   SS+ +                     
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 251 ---DLIRRMLIRDPNNQITVAQILKHPWLN 277
              DLI++ML  DP  +IT+ + LKHP+ +
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPFFD 333

>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           NGT      L +   + KDT  ++     F +F K  N         +I+A EL      
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GFISAAELRHVM-- 110
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
            N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 111 TNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTMM 146

>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  ++I + KE F   D +  G +T  E    +  LG   TE +++  +   D DG
Sbjct: 1   MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 373 NGTT-----LNLSLVQCKDTS----LKD-FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           NGT      LNL   + KDT     LK+ F +F K  N         +I+A EL      
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN--------GFISAAELRHVM-- 110
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
            N+G+   D  + E++ E D D DG+I+Y+EF   M
Sbjct: 111 TNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVM 146

>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 374 GTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           GT      L +   + KDT  ++     F +F K  N         YI+A EL       
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT-- 110
Query: 424 NMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           N+G+   D  + E++ E + D DG+++YEEF   M
Sbjct: 111 NLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMM 145

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 98  CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           C+G +L   +   E ++       + R     +   H+  I+HRDLK  N       E+ 
Sbjct: 87  CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDL 143
Query: 157 TLKATDFGLAFF---FEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYN 210
           T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++LY 
Sbjct: 144 TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 203
Query: 211 LLSGAQPF 218
           L++G  P+
Sbjct: 204 LMTGQLPY 211

>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG+
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 374 GTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           GT      L +   + KDT  ++     F +F K  N         YI+A EL       
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT-- 110
Query: 424 NMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 111 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 98  CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           C+G +L   +   E ++       + R     +   H+  I+HRDLK  N       E+ 
Sbjct: 90  CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDL 146
Query: 157 TLKATDFGLAFF---FEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYN 210
           T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++LY 
Sbjct: 147 TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 206
Query: 211 LLSGAQPF 218
           L++G  P+
Sbjct: 207 LMTGQLPY 214

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 106 RISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL 165
           R++D + +T      + R + + +        +HRDL   N +  +   N   K +DFGL
Sbjct: 107 RLNDGQ-FTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNS---NLVCKVSDFGL 162
Query: 166 AFFFEEGK---VYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           + F EE      Y   +G  +   + APE +   K+    D WS G++++ ++S G +P+
Sbjct: 163 SRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY 222
Query: 219 WAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           W  S    + AI   E D++  P P   +S   L+     +D N +    Q++
Sbjct: 223 WDMSNQDVINAI---EQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVV 272

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 98  CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           C+G +L   +   E ++       + R     +   H+  I+HRDLK  N       E+ 
Sbjct: 90  CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDL 146
Query: 157 TLKATDFGLAFF---FEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYN 210
           T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++LY 
Sbjct: 147 TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 206
Query: 211 LLSGAQPF 218
           L++G  P+
Sbjct: 207 LMTGQLPY 214

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 98  CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           C+G +L   +   E ++       + R     +   H+  I+HRDLK  N       E+ 
Sbjct: 112 CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDL 168
Query: 157 TLKATDFGLAFF---FEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYN 210
           T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++LY 
Sbjct: 169 TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 228
Query: 211 LLSGAQPF 218
           L++G  P+
Sbjct: 229 LMTGQLPY 236

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 96  EHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           + C+G +L   +   E ++       + R     +   H+  I+HRDLK  N       E
Sbjct: 83  QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HE 139
Query: 155 NATLKATDFGLAFF---FEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLIL 208
           + T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++L
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 209 YNLLSGAQPF 218
           Y L++G  P+
Sbjct: 200 YELMTGQLPY 209

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 96  EHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           + C+G +L   +   E ++       + R     +   H+  I+HRDLK  N       E
Sbjct: 83  QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HE 139
Query: 155 NATLKATDFGLAFF---FEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLIL 208
           + T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++L
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 209 YNLLSGAQPF 218
           Y L++G  P+
Sbjct: 200 YELMTGQLPY 209

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 98  CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           C+G +L   +   E ++       + R     +   H+  I+HRDLK  N       E+ 
Sbjct: 113 CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDL 169
Query: 157 TLKATDFGLAFF---FEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYN 210
           T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++LY 
Sbjct: 170 TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 229
Query: 211 LLSGAQPF 218
           L++G  P+
Sbjct: 230 LMTGQLPY 237

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 30/230 (13%)
Query: 91  GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
            +L  E+C G         ++   E   A+V    +  L   HS+ ++HRD+K  N + +
Sbjct: 90  AWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS 149
Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPEL---LGPCKYGKEIDIWSAGLI 207
              E   +K  DFG A        +   VGTP +MAPE+   +   +Y  ++D+WS G+ 
Sbjct: 150 ---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREID-FKSDPWPTISSSAKDLIRRMLIRDPNNQIT 266
              L     P +  +    L  I   E    +S  W   S   ++ +   L + P ++ T
Sbjct: 204 CIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPT 260
Query: 267 VAQILKHPWLNYENGEAWDRP--IDTAIISRVK---------QFRAMSKL 305
              +LKH ++  E      RP  +   +I R K         Q+R M K+
Sbjct: 261 SEVLLKHRFVLRE------RPPTVIMDLIQRTKDAVRELDNLQYRKMKKI 304

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 30/230 (13%)
Query: 91  GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
            +L  E+C G         ++   E   A+V    +  L   HS+ ++HRD+K  N + +
Sbjct: 129 AWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS 188
Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPEL---LGPCKYGKEIDIWSAGLI 207
              E   +K  DFG A        +   VGTP +MAPE+   +   +Y  ++D+WS G+ 
Sbjct: 189 ---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 242
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREID-FKSDPWPTISSSAKDLIRRMLIRDPNNQIT 266
              L     P +  +    L  I   E    +S  W   S   ++ +   L + P ++ T
Sbjct: 243 CIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPT 299
Query: 267 VAQILKHPWLNYENGEAWDRP--IDTAIISRVK---------QFRAMSKL 305
              +LKH ++  E      RP  +   +I R K         Q+R M K+
Sbjct: 300 SEVLLKHRFVLRE------RPPTVIMDLIQRTKDAVRELDNLQYRKMKKI 343

>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase Length = 197

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 24/182 (13%)
Query: 288 IDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKA 347
           + + ++  +K F+  ++LKK+AL +I ++L   EI   +  F  +D ++SGTL+  E   
Sbjct: 22  LSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILD 81
Query: 348 GLSKLGSTLTEVDVKQYMQAADIDGNGT-----------TLNLSLVQCKDTSLKDFNIFT 396
           GL K+G      D+ Q ++  DID N +           T++      K+  L  F  F 
Sbjct: 82  GLKKIGYQKIPPDIHQVLR--DIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFD 139
Query: 397 KPSNILIRIMISIYITADELEAAFKEYNMGD---DATIKEIMFEVDRDKDGRISYEEFCA 453
              N          I+ +EL+  F   ++ +   D  I  ++ EVD + DG I + EF  
Sbjct: 140 IDGN--------GKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFML 191
Query: 454 TM 455
            M
Sbjct: 192 MM 193

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 98  CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           C+G +L   +  +E ++       + R     +   H+  I+HRD+K  N       E  
Sbjct: 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL---HEGL 169
Query: 157 TLKATDFGLAFF---FEEGKVYEEVVGTPLYMAPELL-----GPCKYGKEIDIWSAGLIL 208
           T+K  DFGLA     +   +  E+  G+ L+MAPE++      P  +  + D++S G++L
Sbjct: 170 TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF--QSDVYSYGIVL 227
Query: 209 YNLLSGAQPF 218
           Y L++G  P+
Sbjct: 228 YELMTGELPY 237

>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT--- 376
           E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNGT    
Sbjct: 3   EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 377 --LNLSLVQCKDTSLKD----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMGD--- 427
             L +   + KDT  ++    F +F K  N         YI+A EL       N+G+   
Sbjct: 63  EFLTMMARKMKDTDSEEIREAFRVFDKDGN--------GYISAAELRHVMT--NLGEKLT 112
Query: 428 DATIKEIMFEVDRDKDGRISYEEFCATM 455
           D  + E++ E + D DG+++YEEF   M
Sbjct: 113 DEEVDEMIREANIDGDGQVNYEEFVQMM 140

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 98  CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           C+G +L   +   E ++       + R     +   H+  I+HRDLK  N       E+ 
Sbjct: 105 CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDL 161
Query: 157 TLKATDFGLAF---FFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYN 210
           T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++LY 
Sbjct: 162 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 221
Query: 211 LLSGAQPF 218
           L++G  P+
Sbjct: 222 LMTGQLPY 229

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 98  CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           C+G +L   +   E ++       + R     +   H+  I+HRDLK  N       E+ 
Sbjct: 113 CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDL 169
Query: 157 TLKATDFGLAF---FFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYN 210
           T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++LY 
Sbjct: 170 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 229
Query: 211 LLSGAQPF 218
           L++G  P+
Sbjct: 230 LMTGQLPY 237

>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 21/153 (13%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 374 GTT-----LNLSLVQCKDTS---LKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM 425
           GT      L +   + KD+     + F +F K  N         +I+A EL       N+
Sbjct: 61  GTIDFPEFLTMMARKMKDSEEEIREAFRVFDKDGN--------GFISAAELRHVM--TNL 110
Query: 426 GD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 111 GEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 143

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 98  CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           C+G +L   +   E ++       + R     +   H+  I+HRDLK  N       E+ 
Sbjct: 85  CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDL 141
Query: 157 TLKATDFGLAF---FFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYN 210
           T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++LY 
Sbjct: 142 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 201
Query: 211 LLSGAQPF 218
           L++G  P+
Sbjct: 202 LMTGQLPY 209

>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 23/156 (14%)
Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           +GT      L +   + K T  ++     F +F K  N         YI+A EL      
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT- 410
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
            N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 411 -NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445

>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 23/156 (14%)
Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           +GT      L +   + K T  ++     F +F K  N         YI+A EL      
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT- 410
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
            N+G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 411 -NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445

>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG+G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + K T  ++     F +F K  N         YI+A EL       N
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMT--N 412
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E D D DG+++YEEF   M
Sbjct: 413 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446

>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT 376
           L  E+I   KE F   D +  G +T +E    +  L    TE +++  +   D DGNGT 
Sbjct: 4   LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 377 -----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMG 426
                L+L   + KDT  ++     F +F K  N         YI+A EL       N+G
Sbjct: 64  EFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQN--------GYISASELRHVM--INLG 113
Query: 427 D---DATIKEIMFEVDRDKDGRISYEEFCATMKT 457
           +   D  +++++ E D D DG+++YEEF   M T
Sbjct: 114 EKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMT 147

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 30/200 (15%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKA 160
           L+ +   RE+  ER   S+   V   ++  H+    I+HRDLK  N +    D+  T+K 
Sbjct: 124 LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLV---DKKYTVKV 180
Query: 161 TDFGLAFFFEEGKVYEE-VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFW 219
            DFGL+       +  +   GTP +MAPE+L      ++ D++S G+IL+ L +  QP  
Sbjct: 181 CDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP-- 238
Query: 220 AESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE 279
               +G L            +P   +++      R  + R+ N Q  VA I++  W N  
Sbjct: 239 ----WGNL------------NPAQVVAAVGFKCKRLEIPRNLNPQ--VAAIIEGCWTN-- 278
Query: 280 NGEAWDRPIDTAIISRVKQF 299
             E W RP    I+  ++  
Sbjct: 279 --EPWKRPSFATIMDLLRPL 296

>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            E L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGN
Sbjct: 1   AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 374 GTT-----LNLSLVQCKDTS-----LKDFNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           GT      L+L   + K+       ++ F +F +  N L        I+A EL       
Sbjct: 61  GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGL--------ISAAELRHVM--T 110
Query: 424 NMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           N+G+   D  + E++ E D D DG I+YEEF   M
Sbjct: 111 NLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 93  LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI---MHRDLKPENFIF 149
           L  E   GG L +R+   +R       +    +   ++  H   I   +HRDLK  N + 
Sbjct: 83  LVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141
Query: 150 TTDDENA-----TLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSA 204
               EN       LK TDFGLA  +          G   +MAPE++    + K  D+WS 
Sbjct: 142 LQKVENGDLSNKILKITDFGLAREWHR-TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSY 200
Query: 205 GLILYNLLSGAQPF 218
           G++L+ LL+G  PF
Sbjct: 201 GVLLWELLTGEVPF 214

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 23/166 (13%)
Query: 64  RIYLCTENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVF 122
           ++  C E+   L+F    I    K        E+  GGTL   I   + +Y      S  
Sbjct: 59  KVMRCLEHPNVLKF----IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFA 114
Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE----- 177
           + + + +   HS  I+HRDL   N +     EN  +   DFGLA    + K   E     
Sbjct: 115 KDIASGMAYLHSMNIIHRDLNSHNCLVR---ENKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 178 ----------VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
                     VVG P +MAPE++    Y +++D++S G++L  ++ 
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG 217

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 32/181 (17%)
Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           +  LH    N + HRD+KP N +   ++ + TLK  DFG A      +     + +  Y 
Sbjct: 142 IGCLHLPSVN-VCHRDIKPHNVL--VNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYR 198
Query: 186 APELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------SREI--- 235
           APEL+ G   Y   +DIWS G I   ++ G   F  ++  G L  I+      SRE+   
Sbjct: 199 APELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK 258
Query: 236 -----------DFKSDPWPTISS--------SAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                      + K  PW  + S         A DL+  +L   P  ++   + L HP+ 
Sbjct: 259 LNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318
Query: 277 N 277
           +
Sbjct: 319 D 319

>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGN
Sbjct: 1   AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 374 GTT-----LNLSLVQCKDTS-----LKDFNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           GT      L+L   + K+       ++ F +F +  N L        I+A EL       
Sbjct: 61  GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGL--------ISAAELRHVM--T 110
Query: 424 NMGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           N+G+   D  + E++ E D D DG I+YEEF   M
Sbjct: 111 NLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 103 LVDRISDRERYTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKA 160
           L+ +   RE+  ER   S+   V   ++  H+    I+HR+LK  N +    D+  T+K 
Sbjct: 124 LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV---DKKYTVKV 180
Query: 161 TDFGL----AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQ 216
            DFGL    A  F   K      GTP +MAPE+L      ++ D++S G+IL+ L +  Q
Sbjct: 181 CDFGLSRLKASTFLSSK---SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQ 237
Query: 217 PFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           P      +G L            +P   +++      R  + R+ N Q  VA I++  W 
Sbjct: 238 P------WGNL------------NPAQVVAAVGFKCKRLEIPRNLNPQ--VAAIIEGCWT 277
Query: 277 NYENGEAWDRPIDTAIISRVKQF 299
           N    E W RP    I+  ++  
Sbjct: 278 N----EPWKRPSFATIMDLLRPL 296

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 106 RISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL 165
           R++D + +T      + R + + +        +HRDL   N +  +   N   K +DFGL
Sbjct: 109 RLNDGQ-FTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNS---NLVCKVSDFGL 164
Query: 166 AFFFEEGKVYEEVVGT-----PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           + F EE         +     P+ + APE +   K+    D WS G++++ ++S G +P+
Sbjct: 165 SRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY 224
Query: 219 WAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           W  S    + AI   E D++  P P   +S   L+     +D N +    Q++
Sbjct: 225 WDMSNQDVINAI---EQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVV 274

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 99  DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL 158
           +GG+L   I       E  A       +  L   H+  I+H D+K +N + ++D   A L
Sbjct: 147 EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAAL 206
Query: 159 KATDFGLAFFFEEGKVYEEVV------GTPLYMAPELL--GPCKYGKEIDIWSAGLILYN 210
              DFG A   +   + + ++      GT  +MAPE++   PC    ++DIWS+  ++ +
Sbjct: 207 --CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD--AKVDIWSSCCMMLH 262
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           +L+G  P W +   G L   ++ E     +  P+ +      I+  L ++P ++ +  ++
Sbjct: 263 MLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMEL 321
Query: 271 -------------LKHPW 275
                        LK PW
Sbjct: 322 RRKVGKALQEVGGLKSPW 339

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 99  DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL 158
           +GG+L   I       E  A       +  L   H+  I+H D+K +N + ++D   A L
Sbjct: 133 EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAAL 192
Query: 159 KATDFGLAFFFEEGKVYEEVV------GTPLYMAPELL--GPCKYGKEIDIWSAGLILYN 210
              DFG A   +   + + ++      GT  +MAPE++   PC    ++DIWS+  ++ +
Sbjct: 193 --CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD--AKVDIWSSCCMMLH 248
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           +L+G  P W +   G L   ++ E     +  P+ +      I+  L ++P ++ +  ++
Sbjct: 249 MLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMEL 307
Query: 271 -------------LKHPW 275
                        LK PW
Sbjct: 308 RRKVGKALQEVGGLKSPW 325

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 99  DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL 158
           +GG+L   I       E  A       +  L   H+  I+H D+K +N + ++D   A L
Sbjct: 149 EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAAL 208
Query: 159 KATDFGLAFFFEEGKVYEEVV------GTPLYMAPELL--GPCKYGKEIDIWSAGLILYN 210
              DFG A   +   + + ++      GT  +MAPE++   PC    ++DIWS+  ++ +
Sbjct: 209 --CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD--AKVDIWSSCCMMLH 264
Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           +L+G  P W +   G L   ++ E     +  P+ +      I+  L ++P ++ +  ++
Sbjct: 265 MLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMEL 323
Query: 271 -------------LKHPW 275
                        LK PW
Sbjct: 324 RRKVGKALQEVGGLKSPW 341

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 124 SVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           S+V AL   HS   ++HRD+KP N +         +K  DFG++ +  +    +   G  
Sbjct: 117 SIVKALEHLHSKLSVIHRDVKPSNVLINA---LGQVKMCDFGISGYLVDDVAKDIDAGCK 173
Query: 183 LYMAPELLGP----CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK 238
            YMAPE + P      Y  + DIWS G+ +  L     P+ +   +GT    + + ++  
Sbjct: 174 PYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS---WGTPFQQLKQVVEEP 230
Query: 239 SDPWPTISSSAK--DLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWD 285
           S   P    SA+  D   + L ++   + T  ++++HP+      +  D
Sbjct: 231 SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTD 279

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 14/195 (7%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
            +KS    +  E  + G+L   +   + ++T      + R +   +        +HRDL 
Sbjct: 103 VTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLA 162
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEG---KVYEEVVGTPL---YMAPELLGPCKYGK 197
             N +  +   N   K +DFGL+ F E+      Y   +G  +   + APE +   K+  
Sbjct: 163 ARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTS 219
Query: 198 EIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM 256
             D+WS G++++ ++S G +P+W  +    + AI   E D++  P     S+   L+   
Sbjct: 220 ASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---EQDYRLPPPMDCPSALHQLMLDC 276
Query: 257 LIRDPNNQITVAQIL 271
             +D N++    QI+
Sbjct: 277 WQKDRNHRPKFGQIV 291

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 124 SVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           S+V AL   HS   ++HRD+KP N +    +    +K  DFG++ +  +        G  
Sbjct: 161 SIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVDSVAKTIDAGCK 217
Query: 183 LYMAPELLGP----CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK 238
            YMAPE + P      Y  + DIWS G+ +  L     P+ +   +GT    + + ++  
Sbjct: 218 PYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS---WGTPFQQLKQVVEEP 274
Query: 239 SDPWPTISSSAK--DLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWD 285
           S   P    SA+  D   + L ++   + T  ++++HP+      +  D
Sbjct: 275 SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTD 323

>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase Peptide Bound To Calmodulin Length = 148

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 23/152 (15%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E       LG   TE +++  +   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 374 GTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           GT      L     + KDT  ++     F +F K  N         YI+A EL       
Sbjct: 61  GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHV--XT 110
Query: 424 NMGD---DATIKEIMFEVDRDKDGRISYEEFC 452
           N+G+   D  + E + E D D DG+++YEEF 
Sbjct: 111 NLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRIS---DRERYTERAAASVFRSVVNALHACHSNGIMHRD 141
           +S  D+  L   +   G+L+DR+S        +      + +   N ++  H N  +HRD
Sbjct: 93  SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD 152
Query: 142 LKPENFIFTTDDENATLKATDFGLAFF---FEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           +K  N +    DE  T K +DFGLA     F +  +   +VGT  YMAPE L   +   +
Sbjct: 153 IKSANILL---DEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL-RGEITPK 208
Query: 199 IDIWSAGLILYNLLSG 214
            DI+S G++L  +++G
Sbjct: 209 SDIYSFGVVLLEIITG 224

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRIS---DRERYTERAAASVFRSVVNALHACHSNGIMHRD 141
           +S  D+  L   +   G+L+DR+S        +      + +   N ++  H N  +HRD
Sbjct: 99  SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD 158
Query: 142 LKPENFIFTTDDENATLKATDFGLAFF---FEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           +K  N +    DE  T K +DFGLA     F +  +   +VGT  YMAPE L   +   +
Sbjct: 159 IKSANILL---DEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL-RGEITPK 214
Query: 199 IDIWSAGLILYNLLSG 214
            DI+S G++L  +++G
Sbjct: 215 SDIYSFGVVLLEIITG 230

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRIS---DRERYTERAAASVFRSVVNALHACHSNGIMHRD 141
           +S  D+  L   +   G+L+DR+S        +      + +   N ++  H N  +HRD
Sbjct: 99  SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD 158
Query: 142 LKPENFIFTTDDENATLKATDFGLAFF---FEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           +K  N +    DE  T K +DFGLA     F +  +   +VGT  YMAPE L   +   +
Sbjct: 159 IKSANILL---DEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL-RGEITPK 214
Query: 199 IDIWSAGLILYNLLSG 214
            DI+S G++L  +++G
Sbjct: 215 SDIYSFGVVLLEIITG 230

>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 19/148 (12%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E++ + KE F   D +  G +T  E    +  LG   TE +++  M   D DGNG
Sbjct: 2   DQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNG 61
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + KDT  ++     F +F K  N         +++A EL        
Sbjct: 62  TVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGN--------GFVSAAELRHVMTRLG 113
Query: 425 MG-DDATIKEIMFEVDRDKDGRISYEEF 451
               D  + E++   D D DG+++YEEF
Sbjct: 114 EKLSDEEVDEMIRAADTDGDGQVNYEEF 141

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 17/212 (8%)
Query: 75  LQFACKSISKTSKSDEGYLKREHCDGGTL---VDRISDRERY-TERAAASVFRSVVNALH 130
           L+     + +     E +L       GTL   ++R+ D+  + TE     +   +   L 
Sbjct: 89  LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLE 148
Query: 131 ACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-------KVYEEVVGTPL 183
           A H+ G  HRDLKP N +   + +   +       A    EG       + +     T  
Sbjct: 149 AIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 184 YMAPELL---GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI-MSREIDFKS 239
           Y APEL      C   +  D+WS G +LY ++ G  P+      G   A+ +  ++    
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQ 268
Query: 240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
              P  SS+   L+  M+  DP+ +  +  +L
Sbjct: 269 S--PRHSSALWQLLNSMMTVDPHQRPHIPLLL 298

>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin In The Presence Of 10 Millimolar Exogenously Added Calcium Chloride Length = 149

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 23/152 (15%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E       LG   TE +++  +   D DGN
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 374 GTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           GT      L     + KDT  ++     F +F K  N         YI+A EL       
Sbjct: 62  GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHV--XT 111
Query: 424 NMGDDATIKEI---MFEVDRDKDGRISYEEFC 452
           N+G+  T +E+   + E D D DG+++YEEF 
Sbjct: 112 NLGEKLTDEEVDQXIREADIDGDGQVNYEEFV 143

>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 25/152 (16%)
Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
            + L  E+I + KE F   D +  GT+T  E       LG   TE +++  +   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 374 GTTLNL-----SLVQC-KDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           G T+N         +C KDT  ++     F +F K  N         YI+A EL      
Sbjct: 61  G-TINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHV--X 109
Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEF 451
            N+G+   D  + E + E D D DG+++YEEF
Sbjct: 110 TNLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 65/153 (42%), Gaps = 17/153 (11%)
Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
            R  + AL   HS G++H D+KP N            K  DFGL          E   G 
Sbjct: 163 LRDTLLALAHLHSQGLVHLDVKPANIFLGP---RGRCKLGDFGLLVELGTAGAGEVQEGD 219
Query: 182 PLYMAPELLGPCKYGKEIDIWSAGLILYNL-----LSGAQPFWAESLYGTL----TAIMS 232
           P YMAPELL    YG   D++S GL +  +     L      W +   G L    TA +S
Sbjct: 220 PRYMAPELL-QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLS 278
Query: 233 REID----FKSDPWPTISSSAKDLIRRMLIRDP 261
            E+        +P P + ++A+ L+   ++R P
Sbjct: 279 SELRSVLVMMLEPDPKLRATAEALLALPVLRQP 311

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 84/224 (37%), Gaps = 58/224 (25%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENAT----------------LKATDFGLAF 167
            +  A+   H N + H DLKPEN +F   D   T                ++  DFG A 
Sbjct: 145 QLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSAT 204
Query: 168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA------- 220
           F  E   +  +V T  Y APE++    + +  D+WS G I++    G   F         
Sbjct: 205 FDHEH--HSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHL 262
Query: 221 ---ESLYGTLTAIMSREIDFKSD------PWPTISSSAK--------------------- 250
              E + G + + M R+   +         W   +S+ +                     
Sbjct: 263 AMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHH 322
Query: 251 ---DLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTA 291
              DLI  ML  +P  ++T+ + L+HP+      E  ++  D++
Sbjct: 323 QLFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEPPNKLWDSS 366

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 118 AASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE- 176
           A ++ R + +AL A H+ G  HRD+KPEN + + DD    +   DFG+A    + K+ + 
Sbjct: 136 AVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLV---DFGIASATTDEKLTQL 192
Query: 177 -EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI 235
              VGT  Y APE           DI++   +LY  L+G+ P+  + L     A +++ I
Sbjct: 193 GNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-SVXGAHINQAI 251
Query: 236 DFKSDPWPTISSSAKDLIRRMLIRDPNNQ 264
              S   P I  +   +I R   ++P ++
Sbjct: 252 PRPSTVRPGIPVAFDAVIARGXAKNPEDR 280

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 11/89 (12%)
Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV---VGTPLYMAPEL 189
           H   I HRD K +N +  +D    T    DFGLA  FE GK   +    VGT  YMAPE+
Sbjct: 140 HKPSIAHRDFKSKNVLLKSD---LTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEV 196
Query: 190 L-GPCKYGKE----IDIWSAGLILYNLLS 213
           L G   + ++    ID+++ GL+L+ L+S
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVS 225

>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii Length = 191

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 290 TAIISRVKQFRAMSKLKKLALKVIVENLPA-EEIQKHKETFKQMDTNDSGTLTYDEFKAG 348
           T  +  +K+F++  KL + A+  +   L   EE ++  + F+Q+D N  G L   E   G
Sbjct: 6   TGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEG 65
Query: 349 LSKL----GSTLTEVD-------VKQYMQAADIDGNG---------TTLNLSLVQCKDTS 388
             KL    G T++++D       V   +Q+ D D NG           ++  L+  ++  
Sbjct: 66  YRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 125
Query: 389 LKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISY 448
           L  F  F            S  IT +EL   F    + DD T  +++ E D++ DG + +
Sbjct: 126 LAAFQQFDSDG--------SGKITNEELGRLFGVTEV-DDETWHQVLQECDKNNDGEVDF 176
Query: 449 EEFCATMK 456
           EEF   M+
Sbjct: 177 EEFVEMMQ 184

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
            +KS    +  E+ + G+L   +   + ++T      + R + + +      G +HRDL 
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 174
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVG-TPL-YMAPELLGPCKYGKEI 199
             N +  +   N   K +DFGLA   E+     Y    G  P+ + +PE +   K+    
Sbjct: 175 ARNILINS---NLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 200 DIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
           D+WS G++L+ ++S G +P+W  S    + A+   +  ++  P     ++   L+     
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---DEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 259 RDPNNQITVAQIL 271
           +D NN+    QI+
Sbjct: 289 KDRNNRPKFEQIV 301

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 40/245 (16%)
Query: 52  TIAEELC-----RGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKREHCDGGTL--V 104
            I +E+C      G    +  C+  S G     K  S T ++ E  L  E C G  +  +
Sbjct: 71  AIIQEVCFMKKLSGHPNIVQFCSAASIG-----KEESDTGQA-EFLLLTELCKGQLVEFL 124
Query: 105 DRISDRERYTERAAASVFRSVVNALHACHSN--GIMHRDLKPENFIFTTDDENATLKATD 162
            ++  R   +      +F     A+   H     I+HRDLK EN + +      T+K  D
Sbjct: 125 KKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN---QGTIKLCD 181
Query: 163 FGLAFFF-----------EEGKVYEEVV--GTPLYMAPELL---GPCKYGKEIDIWSAGL 206
           FG A                  V EE+    TP+Y  PE++        G++ DIW+ G 
Sbjct: 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGC 241
Query: 207 ILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT 266
           ILY L     PF      G    I++ +  +   P  T  +    LIR ML  +P  +++
Sbjct: 242 ILYLLCFRQHPFED----GAKLRIVNGK--YSIPPHDTQYTVFHSLIRAMLQVNPEERLS 295
Query: 267 VAQIL 271
           +A+++
Sbjct: 296 IAEVV 300

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV---VGTP 182
           +  L   H   I HRD+K +N +      N T    DFGLA  FE GK   +    VGT 
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKN---NLTACIADFGLALKFEAGKSAGDTHGQVGTR 197
Query: 183 LYMAPELL-GPCKYGKE----IDIWSAGLILYNLLS 213
            YMAPE+L G   + ++    ID+++ GL+L+ L S
Sbjct: 198 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233

>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant) Length = 449

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 23/154 (14%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  G +T  +    +  LG   TE +++  +     DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNG 362
Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + KDT  ++     F +F K  N         YI+A +L       N
Sbjct: 363 TIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGN--------GYISAAQLRHVMT--N 412
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   D  + E++ E   D DG+++YE+F   M
Sbjct: 413 LGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQMM 446

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 112 RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE 171
           ++T      + R +   +        +HR L   N +  +   N   K +DFGL+ F E+
Sbjct: 105 QFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNS---NLVCKVSDFGLSRFLED 161
Query: 172 G---KVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLY 224
                 Y   +G  +   + APE +   K+    D+WS G++++ ++S G +P+W  +  
Sbjct: 162 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 221
Query: 225 GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
             + AI   E D++  P     S+   L+     +D N++    QI+
Sbjct: 222 DVINAI---EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIV 265

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
            +KS    +  E+ + G+L   +   + ++T      + R + + +      G +HRDL 
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLA 174
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVG-TPL-YMAPELLGPCKYGKEI 199
             N +  +   N   K +DFGL+   E+     Y    G  P+ + +PE +   K+    
Sbjct: 175 ARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 200 DIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
           D+WS G++L+ ++S G +P+W  S    + A+   +  ++  P     ++   L+     
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---DEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 259 RDPNNQITVAQIL 271
           +D NN+    QI+
Sbjct: 289 KDRNNRPKFEQIV 301

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 137 IMHRDLKPENFIFTTDDENATL--KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
           I+HRDL+  N    + DENA +  K  DFGL+   +       ++G   +MAPE +G  +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 195 --YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI-MSREIDFKSDPWPTISSSAKD 251
             Y ++ D +S  +ILY +L+G  PF  E  YG +  I M RE   +    PTI      
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF-DEYSYGKIKFINMIREEGLR----PTIPEDCPP 257
Query: 252 LIRRML 257
            +R ++
Sbjct: 258 RLRNVI 263

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
            +KS    +  E+ + G+L   +   + ++T      + R + + +      G +HRDL 
Sbjct: 86  VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 145
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVG-TPL-YMAPELLGPCKYGKEI 199
             N +  +   N   K +DFGL+   E+     Y    G  P+ + +PE +   K+    
Sbjct: 146 ARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 202
Query: 200 DIWSAGLILYNLLS-GAQPFWAESLYGTLTAI 230
           D+WS G++L+ ++S G +P+W  S    + A+
Sbjct: 203 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
            +KS    +  E+ + G+L   +   + ++T      + R + + +      G +HRDL 
Sbjct: 113 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 172
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVG-TPL-YMAPELLGPCKYGKEI 199
             N +  +   N   K +DFGL+   E+     Y    G  P+ + +PE +   K+    
Sbjct: 173 ARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 229
Query: 200 DIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
           D+WS G++L+ ++S G +P+W  S    + A+   +  ++  P     ++   L+     
Sbjct: 230 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---DEGYRLPPPMDCPAALYQLMLDCWQ 286
Query: 259 RDPNNQITVAQIL 271
           +D NN+    QI+
Sbjct: 287 KDRNNRPKFEQIV 299

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
            +KS    +  E+ + G+L   +   + ++T      + R + + +      G +HRDL 
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 174
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVG-TPL-YMAPELLGPCKYGKEI 199
             N +  +   N   K +DFGL+   E+     Y    G  P+ + +PE +   K+    
Sbjct: 175 ARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 200 DIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
           D+WS G++L+ ++S G +P+W  S    + A+   +  ++  P     ++   L+     
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---DEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 259 RDPNNQITVAQIL 271
           +D NN+    QI+
Sbjct: 289 KDRNNRPKFEQIV 301

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
            +KS    +  E+ + G+L   +   + ++T      + R + + +      G +HRDL 
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 174
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVG-TPL-YMAPELLGPCKYGKEI 199
             N +  +   N   K +DFGL+   E+     Y    G  P+ + +PE +   K+    
Sbjct: 175 ARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 200 DIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
           D+WS G++L+ ++S G +P+W  S    + A+   +  ++  P     ++   L+     
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---DEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 259 RDPNNQITVAQIL 271
           +D NN+    QI+
Sbjct: 289 KDRNNRPKFEQIV 301

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
            +KS    +  E+ + G+L   +   + ++T      + R + + +      G +HRDL 
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 174
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVG-TPL-YMAPELLGPCKYGKEI 199
             N +  +   N   K +DFGL+   E+     Y    G  P+ + +PE +   K+    
Sbjct: 175 ARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 200 DIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
           D+WS G++L+ ++S G +P+W  S    + A+   +  ++  P     ++   L+     
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---DEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 259 RDPNNQITVAQIL 271
           +D NN+    QI+
Sbjct: 289 KDRNNRPKFEQIV 301

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
            +KS    +  E+ + G+L   +   + ++T      + R + + +      G +HRDL 
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 174
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVG-TPL-YMAPELLGPCKYGKEI 199
             N +  +   N   K +DFGL+   E+     Y    G  P+ + +PE +   K+    
Sbjct: 175 ARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 200 DIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
           D+WS G++L+ ++S G +P+W  S    + A+   +  ++  P     ++   L+     
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---DEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 259 RDPNNQITVAQIL 271
           +D NN+    QI+
Sbjct: 289 KDRNNRPKFEQIV 301

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
            +KS    +  E+ + G+L   +   + ++T      + R + + +      G +HRDL 
Sbjct: 103 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 162
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVG-TPL-YMAPELLGPCKYGKEI 199
             N +  +   N   K +DFGL+   E+     Y    G  P+ + +PE +   K+    
Sbjct: 163 ARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 219
Query: 200 DIWSAGLILYNLLS-GAQPFWAESLYGTLTAI 230
           D+WS G++L+ ++S G +P+W  S    + A+
Sbjct: 220 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 251

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
            +KS    +  E+ + G+L   +   + ++T      + R + + +      G +HRDL 
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 174
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVG-TPL-YMAPELLGPCKYGKEI 199
             N +  +   N   K +DFGL    E+     Y    G  P+ + +PE +   K+    
Sbjct: 175 ARNILINS---NLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 200 DIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
           D+WS G++L+ ++S G +P+W  S    + A+   +  ++  P     ++   L+     
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---DEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 259 RDPNNQITVAQIL 271
           +D NN+    QI+
Sbjct: 289 KDRNNRPKFEQIV 301

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRIS---DRERYTERAAASVFRSVVNALHACHSNGIMHRD 141
           +S  D+  L   +   G+L+DR+S        +      + +   N ++  H N  +HRD
Sbjct: 90  SSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRD 149
Query: 142 LKPENFIFTTDDENATLKATDFGLAFF---FEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           +K  N +    DE  T K +DFGLA     F +      +VGT  Y APE L   +   +
Sbjct: 150 IKSANILL---DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL-RGEITPK 205
Query: 199 IDIWSAGLILYNLLSG 214
            DI+S G++L  +++G
Sbjct: 206 SDIYSFGVVLLEIITG 221

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 112 RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE 171
           ++T      + R + + +      G +HRDL   N +  +   N   K +DFGL+   E+
Sbjct: 114 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLED 170
Query: 172 GK--VYEEVVG-TPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGT 226
                Y    G  P+ + +PE +   K+    D+WS G++L+ ++S G +P+W  S    
Sbjct: 171 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 230
Query: 227 LTAI 230
           + A+
Sbjct: 231 IKAV 234

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 112 RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE 171
           ++T      + R + + +      G +HRDL   N +  +   N   K +DFGL+   E+
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINS---NLVCKVSDFGLSRVLED 199
Query: 172 GK--VYEEVVG-TPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGT 226
                Y    G  P+ + +PE +   K+    D+WS G++L+ ++S G +P+W  S    
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 227 LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           + A+   +  ++  P     ++   L+     +D NN+    QI+
Sbjct: 260 IKAV---DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 112 RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE 171
           ++T      + R + + +      G +HRDL   N +  +   N   K +DFGL+   E+
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLED 199
Query: 172 GK--VYEEVVG-TPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGT 226
                Y    G  P+ + +PE +   K+    D+WS G++L+ ++S G +P+W  S    
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 227 LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQIL 271
           + A+   +  ++  P     ++   L+     +D NN+    QI+
Sbjct: 260 IKAV---DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 112 RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE 171
           ++T      + R +   +      G +HRDL   N +  +   N   K +DFGL+   E+
Sbjct: 141 QFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNS---NLVCKVSDFGLSRVIED 197
Query: 172 GK--VYEEVVG-TPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGT 226
               VY    G  P+ + APE +   K+    D+WS G++++ ++S G +P+W  S    
Sbjct: 198 DPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 257
Query: 227 LTAI 230
           + AI
Sbjct: 258 IKAI 261

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 13/169 (7%)
Query: 124 SVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
           S+V AL   HS   ++HRD+KP N +         +K  DFG++ +  +    +   G  
Sbjct: 144 SIVKALEHLHSKLSVIHRDVKPSNVLINA---LGQVKXCDFGISGYLVDDVAKDIDAGCK 200
Query: 183 LYMAPELLGP----CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK 238
            Y APE + P      Y  + DIWS G+    L     P+     +GT    + + ++  
Sbjct: 201 PYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPY---DSWGTPFQQLKQVVEEP 257
Query: 239 SDPWPTISSSAK--DLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWD 285
           S   P    SA+  D   + L ++   + T  ++ +HP+      +  D
Sbjct: 258 SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLHESKGTD 306

>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           +NL  E+I + KE F   D ++SG+++  E    +  LG + +E +V   M   D+DGN 
Sbjct: 3   QNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNH 62
Query: 375 T-------TLNLSLVQCKDTS---LKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
                    L    ++C D+    L+ F +F K  + L        I+A EL+      +
Sbjct: 63  AIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGL--------ISAAELKHVLT--S 112
Query: 425 MGD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           +G+   DA + E++ EV  D  G I+ ++F A +
Sbjct: 113 IGEKLTDAEVDEMLREVS-DGSGEINIKQFAALL 145

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 96  EHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           E+   G L++ + + R R+  +    + + V  A+    S   +HRDL   N +    ++
Sbjct: 79  EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---ND 135
Query: 155 NATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNL 211
              +K +DFGL+ +  + + Y   VG+     +  PE+L   K+  + DIW+ G++++ +
Sbjct: 136 QGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 194
Query: 212 LS-GAQPF 218
            S G  P+
Sbjct: 195 YSLGKMPY 202

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 96  EHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           E+   G L++ + + R R+  +    + + V  A+    S   +HRDL   N +    ++
Sbjct: 83  EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---ND 139
Query: 155 NATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNL 211
              +K +DFGL+ +  + + Y   VG+     +  PE+L   K+  + DIW+ G++++ +
Sbjct: 140 QGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 198
Query: 212 LS-GAQPF 218
            S G  P+
Sbjct: 199 YSLGKMPY 206

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 96  EHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           E+   G L++ + + R R+  +    + + V  A+    S   +HRDL   N +    ++
Sbjct: 84  EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---ND 140
Query: 155 NATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNL 211
              +K +DFGL+ +  + + Y   VG+     +  PE+L   K+  + DIW+ G++++ +
Sbjct: 141 QGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
Query: 212 LS-GAQPF 218
            S G  P+
Sbjct: 200 YSLGKMPY 207

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 53/127 (41%), Gaps = 27/127 (21%)
Query: 114 TERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           TE    ++  +++   +  H +GI+HRDLKP N +   D    ++K  DFGLA      K
Sbjct: 127 TEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQD---CSVKVCDFGLARTINSEK 183
Query: 174 VYEEV-----------------------VGTPLYMAPEL-LGPCKYGKEIDIWSAGLILY 209
               V                       V T  Y APEL L    Y K IDIWS G I  
Sbjct: 184 DTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFA 243
Query: 210 NLLSGAQ 216
            LL+  Q
Sbjct: 244 ELLNMLQ 250

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 92  YLKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           ++  E+   G L++ + + R R+  +    + + V  A+    S   +HRDL   N +  
Sbjct: 86  FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV- 144
Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLI 207
             ++   +K +DFGL+ +  + + Y   VG+     +  PE+L   K+  + DIW+ G++
Sbjct: 145 --NDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 201
Query: 208 LYNLLS-GAQPF 218
           ++ + S G  P+
Sbjct: 202 MWEIYSLGKMPY 213

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 137 IMHRDLKPENFIFTTDDENATL--KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
           I+HRDL+  N    + DENA +  K  DFG +   +       ++G   +MAPE +G  +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 195 --YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI-MSREIDFKSDPWPTISSSAKD 251
             Y ++ D +S  +ILY +L+G  PF  E  YG +  I M RE   +    PTI      
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF-DEYSYGKIKFINMIREEGLR----PTIPEDCPP 257
Query: 252 LIRRML 257
            +R ++
Sbjct: 258 RLRNVI 263

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 92  YLKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           ++  E+   G L++ + + R R+  +    + + V  A+    S   +HRDL   N +  
Sbjct: 95  FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV- 153
Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLI 207
             ++   +K +DFGL+ +  + + Y   VG+     +  PE+L   K+  + DIW+ G++
Sbjct: 154 --NDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 210
Query: 208 LYNLLS-GAQPF 218
           ++ + S G  P+
Sbjct: 211 MWEIYSLGKMPY 222

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E+   G+LVD +  R R        +  S  V  A+     N  +HRDL   N + 
Sbjct: 76  YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 135
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL-YMAPELLGPCKYGKEIDIWSAGLIL 208
           + D+     K +DFGL    +E    ++    P+ + APE L   K+  + D+WS G++L
Sbjct: 136 SEDN---VAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 189
Query: 209 YNLLS-GAQPF 218
           + + S G  P+
Sbjct: 190 WEIYSFGRVPY 200

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E+   G+LVD +  R R        +  S  V  A+     N  +HRDL   N + 
Sbjct: 91  YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 150
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL-YMAPELLGPCKYGKEIDIWSAGLIL 208
           + D+     K +DFGL    +E    ++    P+ + APE L   K+  + D+WS G++L
Sbjct: 151 SEDN---VAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 204
Query: 209 YNLLS-GAQPF 218
           + + S G  P+
Sbjct: 205 WEIYSFGRVPY 215

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 137 IMHRDLKPENFIFTTDDENATL--KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
           I+HRDL+  N    + DENA +  K  DF L+   +       ++G   +MAPE +G  +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 195 --YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI-MSREIDFKSDPWPTISSSAKD 251
             Y ++ D +S  +ILY +L+G  PF  E  YG +  I M RE   +    PTI      
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF-DEYSYGKIKFINMIREEGLR----PTIPEDCPP 257
Query: 252 LIRRML 257
            +R ++
Sbjct: 258 RLRNVI 263

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E+   G+LVD +  R R        +  S  V  A+     N  +HRDL   N + 
Sbjct: 263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 322
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL-YMAPELLGPCKYGKEIDIWSAGLIL 208
           + D+     K +DFGL    +E    ++    P+ + APE L   K+  + D+WS G++L
Sbjct: 323 SEDN---VAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 376
Query: 209 YNLLS-GAQPF 218
           + + S G  P+
Sbjct: 377 WEIYSFGRVPY 387

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 112 RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE 171
           R+T      + R + + +        +HRDL   N +  +   N   K +DFG++   E+
Sbjct: 112 RFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNS---NLVCKVSDFGMSRVLED 168
Query: 172 GK--VYEEVVG-TPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGT 226
                Y    G  P+ + APE +   K+    D+WS G++++ ++S G +P+W  S    
Sbjct: 169 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 228
Query: 227 LTAI 230
           + AI
Sbjct: 229 IKAI 232

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 112 RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE 171
           R+T      + R + + +        +HRDL   N +  +   N   K +DFG++   E+
Sbjct: 127 RFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNS---NLVCKVSDFGMSRVLED 183
Query: 172 GK--VYEEVVG-TPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGT 226
                Y    G  P+ + APE +   K+    D+WS G++++ ++S G +P+W  S    
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 243
Query: 227 LTAI 230
           + AI
Sbjct: 244 IKAI 247

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 112 RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE 171
           R+T      + R + + +        +HRDL   N +  +   N   K +DFG++   E+
Sbjct: 106 RFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNS---NLVCKVSDFGMSRVLED 162
Query: 172 GK--VYEEVVG-TPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGT 226
                Y    G  P+ + APE +   K+    D+WS G++++ ++S G +P+W  S    
Sbjct: 163 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 222
Query: 227 LTAI 230
           + AI
Sbjct: 223 IKAI 226

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV--- 179
           + +   +   H+   +HR L   N +    D +  +K  DFGLA    EG  Y  V    
Sbjct: 119 QQICEGMAYLHAQHYIHRALAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVREDG 175
Query: 180 GTPLY-MAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            +P++  APE L  CK+    D+WS G+ LY LL+
Sbjct: 176 DSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV--- 179
           + +   +   H+   +HR L   N +    D +  +K  DFGLA    EG  Y  V    
Sbjct: 118 QQICEGMAYLHAQHYIHRALAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVREDG 174
Query: 180 GTPLY-MAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            +P++  APE L  CK+    D+WS G+ LY LL+
Sbjct: 175 DSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 58  CRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKREHCDGGTLVDRISDRERYT 114
           C  +S R     E  T  QF    I K       +  ++  E C  G L   +  R+   
Sbjct: 49  CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL 108
Query: 115 ERAAASVFR-SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           + A+  ++   +  AL    S   +HRD+   N + +++D    +K  DFGL+ + E+  
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDST 165
Query: 174 VYEEVVGT-PL-YMAPELLGPCKYGKEIDIWSAGLILYN-LLSGAQPF 218
            Y+   G  P+ +MAPE +   ++    D+W  G+ ++  L+ G +PF
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 58  CRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKREHCDGGTLVDRISDRERYT 114
           C  +S R     E  T  QF    I K       +  ++  E C  G L   +  R+   
Sbjct: 49  CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL 108
Query: 115 ERAAASVFR-SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           + A+  ++   +  AL    S   +HRD+   N + +++D    +K  DFGL+ + E+  
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDST 165
Query: 174 VYEEVVGT-PL-YMAPELLGPCKYGKEIDIWSAGLILYN-LLSGAQPF 218
            Y+   G  P+ +MAPE +   ++    D+W  G+ ++  L+ G +PF
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E+   G+LVD +  R R        +  S  V  A+     N  +HRDL   N + 
Sbjct: 82  YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 141
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL-YMAPELLGPCKYGKEIDIWSAGLIL 208
           + D+     K +DFGL    +E    ++    P+ + APE L    +  + D+WS G++L
Sbjct: 142 SEDN---VAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILL 195
Query: 209 YNLLS-GAQPF 218
           + + S G  P+
Sbjct: 196 WEIYSFGRVPY 206

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 58  CRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKREHCDGGTLVDRISDRERYT 114
           C  +S R     E  T  QF    I K       +  ++  E C  G L   +  R+   
Sbjct: 46  CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL 105
Query: 115 ERAAASVFR-SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           + A+  ++   +  AL    S   +HRD+   N + +++D    +K  DFGL+ + E+  
Sbjct: 106 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDST 162
Query: 174 VYEEVVGT-PL-YMAPELLGPCKYGKEIDIWSAGLILYN-LLSGAQPF 218
            Y+   G  P+ +MAPE +   ++    D+W  G+ ++  L+ G +PF
Sbjct: 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 210

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 85  TSKSDEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLK 143
            +KS    +  E+ + G+L   +   + ++T      + R +   +      G +HRDL 
Sbjct: 92  VTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLA 151
Query: 144 PENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVG-TPL-YMAPELLGPCKYGKEI 199
             N +  +   N   K +DFGL+   E+     Y    G  P+ + APE +   K+    
Sbjct: 152 ARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSAS 208
Query: 200 DIWSAGLILYNLLS-GAQPFW 219
           D+WS G++++ ++S G +P+W
Sbjct: 209 DVWSYGIVMWEVVSYGERPYW 229

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 58  CRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKREHCDGGTLVDRISDRERYT 114
           C  +S R     E  T  QF    I K       +  ++  E C  G L   +  R+   
Sbjct: 77  CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL 136
Query: 115 ERAAASVFR-SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           + A+  ++   +  AL    S   +HRD+   N + +++D    +K  DFGL+ + E+  
Sbjct: 137 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDST 193
Query: 174 VYEEVVGT-PL-YMAPELLGPCKYGKEIDIWSAGLILYN-LLSGAQPF 218
            Y+   G  P+ +MAPE +   ++    D+W  G+ ++  L+ G +PF
Sbjct: 194 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 241

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 58  CRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKREHCDGGTLVDRISDRERYT 114
           C  +S R     E  T  QF    I K       +  ++  E C  G L   +  R+   
Sbjct: 51  CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL 110
Query: 115 ERAAASVFR-SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           + A+  ++   +  AL    S   +HRD+   N + +++D    +K  DFGL+ + E+  
Sbjct: 111 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDST 167
Query: 174 VYEEVVGT-PL-YMAPELLGPCKYGKEIDIWSAGLILYN-LLSGAQPF 218
            Y+   G  P+ +MAPE +   ++    D+W  G+ ++  L+ G +PF
Sbjct: 168 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 215

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 136 GIMHRDLKPENFIFTTDDENATL---KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           GI+H D+KPEN +    D    L   K  D G A +++E   Y   + T  Y +PE+L  
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLG 209
Query: 193 CKYGKEIDIWSAGLILYNLLSG 214
             +G   DIWS   +++ L++G
Sbjct: 210 APWGCGADIWSTACLIFELITG 231

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           ++R+ + E+ T +   S    +   +    S   +HRDL   N + T   EN  +K  DF
Sbjct: 192 INRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 247
Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA        Y++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 248 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 58  CRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKREHCDGGTLVDRISDRERYT 114
           C  +S R     E  T  QF    I K       +  ++  E C  G L   +  R+   
Sbjct: 429 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSL 488
Query: 115 ERAAASVFR-SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           + A+  ++   +  AL    S   +HRD+   N + +++D    +K  DFGL+ + E+  
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDST 545
Query: 174 VYEEVVGT-PL-YMAPELLGPCKYGKEIDIWSAGLILYN-LLSGAQPF 218
            Y+   G  P+ +MAPE +   ++    D+W  G+ ++  L+ G +PF
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 136 GIMHRDLKPENFIFTTDDENATL---KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           GI+H D+KPEN +    D    L   K  D G A +++E   Y   + T  Y +PE+L  
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLG 209
Query: 193 CKYGKEIDIWSAGLILYNLLSG 214
             +G   DIWS   +++ L++G
Sbjct: 210 APWGCGADIWSTACLIFELITG 231

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           ++R+ + E+ T +   S    +   +    S   +HRDL   N + T   EN  +K  DF
Sbjct: 133 INRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT---ENNVMKIADF 188
Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA        Y++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 189 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 58  CRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKREHCDGGTLVDRISDRERYT 114
           C  +S R     E  T  QF    I K       +  ++  E C  G L   +  R+   
Sbjct: 52  CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL 111
Query: 115 ERAAASVFR-SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           + A+  ++   +  AL    S   +HRD+   N + +++D    +K  DFGL+ + E+  
Sbjct: 112 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDST 168
Query: 174 VYEEVVGT-PL-YMAPELLGPCKYGKEIDIWSAGLILYN-LLSGAQPF 218
            Y+   G  P+ +MAPE +   ++    D+W  G+ ++  L+ G +PF
Sbjct: 169 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 216

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           ++R+ + E+ T +   S    +   +    S   +HRDL   N + T   EN  +K  DF
Sbjct: 138 INRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 193
Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA        Y++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 194 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 58  CRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKREHCDGGTLVDRISDRERYT 114
           C  +S R     E  T  QF    I K       +  ++  E C  G L   +  R+   
Sbjct: 54  CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL 113
Query: 115 ERAAASVFR-SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           + A+  ++   +  AL    S   +HRD+   N + +++D    +K  DFGL+ + E+  
Sbjct: 114 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDST 170
Query: 174 VYEEVVGT-PL-YMAPELLGPCKYGKEIDIWSAGLILYN-LLSGAQPF 218
            Y+   G  P+ +MAPE +   ++    D+W  G+ ++  L+ G +PF
Sbjct: 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           ++R+ + E+ T +   S    +   +    S   +HRDL   N + T   EN  +K  DF
Sbjct: 146 INRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA        Y++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           ++R+ + E+ T +   S    +   +    S   +HRDL   N + T   EN  +K  DF
Sbjct: 146 INRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA        Y++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           ++R+ + E+ T +   S    +   +    S   +HRDL   N + T   EN  +K  DF
Sbjct: 146 INRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA        Y++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           ++R+ + E+ T +   S    +   +    S   +HRDL   N + T   EN  +K  DF
Sbjct: 135 INRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 190
Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA        Y++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 191 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           ++R+ + E+ T +   S    +   +    S   +HRDL   N + T   EN  +K  DF
Sbjct: 146 INRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA        Y++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           ++R+ + E+ T +   S    +   +    S   +HRDL   N + T   EN  +K  DF
Sbjct: 146 INRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA        Y++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5_820 Length = 214

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 293 ISRVKQFRAMSKLKKLALKVIVENLPA-EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSK 351
           I  +++F+   KL + AL  +   L + EE ++  + F+ +D N  G L   E   G SK
Sbjct: 32  IENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSK 91
Query: 352 L-GSTLTEVDVKQY-------MQAADIDGNG---------TTLNLSLVQCKDTSLKDFNI 394
           L G  +   D+ Q        + AAD D NG           ++   +  KD     F  
Sbjct: 92  LSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQK 151
Query: 395 FTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCAT 454
           F +  N          I+ DEL + F   ++ +  T KE++  +D + DG + +EEFC  
Sbjct: 152 FDQDGNG--------KISVDELASVFGLDHL-ESKTWKEMISGIDSNNDGDVDFEEFCKM 202
Query: 455 MK 456
           ++
Sbjct: 203 IQ 204

>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 26/168 (15%)
Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN-- 373
           NL  E+I + KE F   D +++G+++  E    +  LG + +E +V   M   D+DGN  
Sbjct: 4   NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 63
Query: 374 ---GTTLNLSLVQCKDTS-----LKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM 425
                 L L   Q K        L+ F +F K  + L        I+A EL+      ++
Sbjct: 64  IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGL--------ISAAELKHVL--TSI 113
Query: 426 GD---DATIKEIMFEVDRDKDGRISYEEFCATMKTG--THLRGTSYRN 468
           G+   DA + +++ EV  D  G I+ ++F A +  G  T  R  + RN
Sbjct: 114 GEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSKGSSTGTRRKALRN 160

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEV 178
           + R V   +      G +HRDL   N +    D N   K +DFGL+   E+     Y   
Sbjct: 156 MLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAYTTT 212
Query: 179 VG-TPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
            G  P+ + APE +    +    D+WS G++++ +L+ G +P+W
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
           E+ + +   S    V   +    S   +HRDL   N + T D+    +K  DFGLA    
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIH 186
Query: 171 EGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
               Y++     L   +MAPE L    Y  + D+WS G++L+ + + G  P+
Sbjct: 187 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
           E+ + +   S    V   +    S   +HRDL   N + T D+    +K  DFGLA    
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIH 190
Query: 171 EGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
               Y++     L   +MAPE L    Y  + D+WS G++L+ + + G  P+
Sbjct: 191 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           ++R+ + E+ T +   S    +   +    S   +HRDL   N + T   EN  +K  DF
Sbjct: 146 INRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA        Y+      L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 202 GLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
           E+ + +   S    V   +    S   +HRDL   N + T D+    +K  DFGLA    
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIH 194
Query: 171 EGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
               Y++     L   +MAPE L    Y  + D+WS G++L+ + + G  P+
Sbjct: 195 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 96  EHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           E+   G L++ + + R R+  +    + + V  A+    S   +HRDL   N +    ++
Sbjct: 84  EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---ND 140
Query: 155 NATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNL 211
              +K +DFGL+ +  + + Y    G+     +  PE+L   K+  + DIW+ G++++ +
Sbjct: 141 QGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
Query: 212 LS-GAQPF 218
            S G  P+
Sbjct: 200 YSLGKMPY 207

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
           E+ + +   S    V   +    S   +HRDL   N + T D+    +K  DFGLA    
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIH 201
Query: 171 EGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
               Y++     L   +MAPE L    Y  + D+WS G++L+ + + G  P+
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
           E+ + +   S    V   +    S   +HRDL   N + T D+    +K  DFGLA    
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIH 193
Query: 171 EGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
               Y++     L   +MAPE L    Y  + D+WS G++L+ + + G  P+
Sbjct: 194 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
           E+ + +   S    V   +    S   +HRDL   N + T D+    +K  DFGLA    
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIH 201
Query: 171 EGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
               Y++     L   +MAPE L    Y  + D+WS G++L+ + + G  P+
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
           E+ + +   S    V   +    S   +HRDL   N + T D+    +K  DFGLA    
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIH 201
Query: 171 EGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
               Y++     L   +MAPE L    Y  + D+WS G++L+ + + G  P+
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 61  ESGRIYLCTENSTGLQFACKSISK----TSKSDEGYLKREHCDGGTLVDRISDRE-RYTE 115
           E  R+    E     QF+  +I +     SK     +  E+ + G L   + +++  ++ 
Sbjct: 87  EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV 146
Query: 116 RAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-- 173
                + R +   +    +   +HRDL   N +    + N   K +DFGL+   E+    
Sbjct: 147 LQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEA 203
Query: 174 VYEEVVG-TPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAI 230
            Y    G  P+ + APE +   K+    D+WS G++++ +++ G +P+W  S +  + AI
Sbjct: 204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 263

>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX Length = 149

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 17/150 (11%)
Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT- 375
           L  E+ Q+ +E F   DT+ SGT+   E K  +  LG    + ++K+ +   D DG+GT 
Sbjct: 2   LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 376 ---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG 426
                    T  +     ++  +K F +F       I    ++   A EL       NM 
Sbjct: 62  DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFK-NLKRVAKELGE-----NMT 115
Query: 427 DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           D+  ++E++ E DRD DG ++ EEF   MK
Sbjct: 116 DEE-LQEMIDEADRDGDGEVNEEEFFRIMK 144

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           ++R+ + E+ T +   S    +   +    S   +HRDL   N + T   EN  ++  DF
Sbjct: 146 INRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMRIADF 201
Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA        Y++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
           E+ + +   S    V   +    S   +HRDL   N + T D+    +K  DFGLA    
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIH 242
Query: 171 EGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
               Y++     L   +MAPE L    Y  + D+WS G++L+ + + G  P+
Sbjct: 243 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 30/127 (23%)
Query: 114 TERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           TE+   ++  +++      H +GI+HRDLKP N +   D    ++K  DFGLA      K
Sbjct: 129 TEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQD---CSVKICDFGLARTINSDK 185
Query: 174 VYEEV--------------------------VGTPLYMAPEL-LGPCKYGKEIDIWSAGL 206
               V                          V T  Y APEL L    Y   IDIWS G 
Sbjct: 186 DIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGC 245
Query: 207 ILYNLLS 213
           I   LL+
Sbjct: 246 IFAELLN 252

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA---FFFEEGKVYEEVVGTPLY 184
            LH  H+  I+HRD+K  N +    DEN   K TDFG++      ++  +   V GT  Y
Sbjct: 151 GLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 185 MAPELLGPCKYGKEIDIWSAGLILYNLL 212
           + PE     +  ++ D++S G++L+ +L
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVL 235

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYG 196
           I+H DLKPEN I   + + + +K  DFG +   + G+   + + +  Y +PE+L    Y 
Sbjct: 161 IIHCDLKPEN-ILLCNPKRSAIKIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMPYD 217
Query: 197 KEIDIWSAGLILYNLLSGAQPF 218
             ID+WS G IL  + +G   F
Sbjct: 218 LAIDMWSLGCILVEMHTGEPLF 239

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYG 196
           I+H DLKPEN I   + + + +K  DFG +   + G+   + + +  Y +PE+L    Y 
Sbjct: 180 IIHCDLKPEN-ILLCNPKRSAIKIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 197 KEIDIWSAGLILYNLLSGAQPF 218
             ID+WS G IL  + +G   F
Sbjct: 237 LAIDMWSLGCILVEMHTGEPLF 258

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 58  CRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKREHCDGGTLVDRISDRERYT 114
           C  +S R     E  T  QF    I K       +  ++  E C  G L   +  R+   
Sbjct: 429 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSL 488
Query: 115 ERAAASVFR-SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           + A+  ++   +  AL    S   +HRD+   N + +  D    +K  DFGL+ + E+  
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDST 545
Query: 174 VYEEVVGT-PL-YMAPELLGPCKYGKEIDIWSAGLILYN-LLSGAQPF 218
            Y+   G  P+ +MAPE +   ++    D+W  G+ ++  L+ G +PF
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG----KVYEEV 178
           + +   +   H+   +HRDL   N +    D +  +K  DFGLA    EG    +V E+ 
Sbjct: 141 QQICEGMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEXYRVREDG 197
Query: 179 VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
                + APE L   K+    D+WS G+ LY LL+
Sbjct: 198 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 58  CRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKREHCDGGTLVDRISDRERYT 114
           C  +S R     E  T  QF    I K       +  ++  E C  G L   +  R+   
Sbjct: 49  CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSL 108
Query: 115 ERAAASVFR-SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           + A+  ++   +  AL    S   +HRD+   N + +  D    +K  DFGL+ + E+  
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDST 165
Query: 174 VYEEVVGT-PL-YMAPELLGPCKYGKEIDIWSAGLILYN-LLSGAQPF 218
            Y+   G  P+ +MAPE +   ++    D+W  G+ ++  L+ G +PF
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213

>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 156

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT 376
           + A+EI++  + FK++D ++SG+L+ +EF +    L        V++ +   D DGNG  
Sbjct: 1   MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEV 56
Query: 377 LNLSLVQCKDTSLKDFNIFTKPSNILIRIMISI-------YITADELEAAFKEY--NMGD 427
                ++     +  F++       L R    I       YI+  EL    K    N   
Sbjct: 57  DFKEFIE----GVSQFSVKGDKEQKL-RFAFRIYDMDKDGYISNGELFQVLKMMVGNNLK 111
Query: 428 DATIKEI----MFEVDRDKDGRISYEEFCATM 455
           D  +++I    +   D+D DGRIS+EEFCA +
Sbjct: 112 DTQLQQIVDKTIINADKDGDGRISFEEFCAVV 143

>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT- 375
           L  E+ Q+ +E F   DT+ SGT+   E K  +  LG    + ++K+ +   D DG+GT 
Sbjct: 22  LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 376 ---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG 426
                    T  +     ++  LK F +F   +        S  IT  +L    KE  +G
Sbjct: 82  DFEEFLTMMTAKMGERDSREEILKAFRLFDDDN--------SGTITIKDLRRVAKE--LG 131
Query: 427 DDAT---IKEIMFEVDRDKDGRISYEEFCATMK 456
           ++ T   ++E++ E DR+ D  I  +EF   MK
Sbjct: 132 ENLTEEELQEMIAEADRNDDNEIDEDEFIRIMK 164

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 92  YLKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           ++  E+   G L++ + + R R+  +    + + V  A+    S   +HRDL   N +  
Sbjct: 95  FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV- 153
Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEV--VGTPL---YMAPELLGPCKYGKEIDIWSAG 205
             ++   +K +DFGL+ +  +    EE   VG+     +  PE+L   K+  + DIW+ G
Sbjct: 154 --NDQGVVKVSDFGLSRYVLDD---EETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208
Query: 206 LILYNLLS-GAQPF 218
           ++++ + S G  P+
Sbjct: 209 VLMWEIYSLGKMPY 222

>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 155

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLN 378
           A+EI++  + FK++D ++SG+L+ +EF +    L        V++ +   D DGNG    
Sbjct: 2   ADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEVDF 57
Query: 379 LSLVQCKDTSLKDFNIFTKPSNILIRIMISI-------YITADELEAAFKEY--NMGDDA 429
              ++     +  F++       L R    I       YI+  EL    K    N   D 
Sbjct: 58  KEFIE----GVSQFSVKGDKEQKL-RFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDT 112
Query: 430 TIKEI----MFEVDRDKDGRISYEEFCATM 455
            +++I    +   D+D DGRIS+EEFCA +
Sbjct: 113 QLQQIVDKTIINADKDGDGRISFEEFCAVV 142

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV--- 179
           + +   +   HS   +HR+L   N +    D +  +K  DFGLA    EG  Y  V    
Sbjct: 124 QQICEGMAYLHSQHYIHRNLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 180 GTPLY-MAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            +P++  APE L   K+    D+WS G+ LY LL+
Sbjct: 181 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 42/225 (18%)
Query: 79  CKSISKTSKSDEGYLKREHCDGGTLVDRISDRER----YTERAAASVFRSVVNALHACHS 134
            +  S  ++ D   ++ E+C+GG+L D IS+  R    + E     +   V   L   HS
Sbjct: 70  VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 129
Query: 135 NGIMHRDLKPEN-FIFTTDDENAT---------------LKATDFGLAFFFEEGKVYEEV 178
             ++H D+KP N FI  T   NA                 K  D G        +V E  
Sbjct: 130 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE-- 187
Query: 179 VGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPF------WAESLYGTLTAIM 231
            G   ++A E+L     +  + DI++  L +    +GA+P       W E   G L  I 
Sbjct: 188 -GDSRFLANEVLQENYTHLPKADIFALALTVVX-AAGAEPLPRNGDQWHEIRQGRLPRIP 245
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                        +S    +L++ M+  DP  + +   ++KH  L
Sbjct: 246 Q-----------VLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 279

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE--------- 171
           + R V   +      G +HRDL   N +    D N   K +DFGL+   E+         
Sbjct: 156 MLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAXTTT 212
Query: 172 -GKVYEEVVGTPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
            GK+       P+ + APE +    +    D+WS G++++ +L+ G +P+W
Sbjct: 213 GGKI-------PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYG 196
           I+H DLKPEN I   + +   +K  DFG +   + G+   + + +  Y +PE+L    Y 
Sbjct: 180 IIHCDLKPEN-ILLCNPKRXAIKIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 197 KEIDIWSAGLILYNLLSGAQPF 218
             ID+WS G IL  + +G   F
Sbjct: 237 LAIDMWSLGCILVEMHTGEPLF 258

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 42/225 (18%)
Query: 79  CKSISKTSKSDEGYLKREHCDGGTLVDRISDRER----YTERAAASVFRSVVNALHACHS 134
            +  S  ++ D   ++ E+C+GG+L D IS+  R    + E     +   V   L   HS
Sbjct: 72  VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 135 NGIMHRDLKPEN-FIFTTDDENAT---------------LKATDFGLAFFFEEGKVYEEV 178
             ++H D+KP N FI  T   NA                 K  D G        +V E  
Sbjct: 132 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE-- 189
Query: 179 VGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPF------WAESLYGTLTAIM 231
            G   ++A E+L     +  + DI++  L +    +GA+P       W E   G L  I 
Sbjct: 190 -GDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEIRQGRLPRIP 247
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                        +S    +L++ M+  DP  + +   ++KH  L
Sbjct: 248 Q-----------VLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 281

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GKVYEEVV--GTPLY 184
            LH  H+  I+HRD+K  N +    DEN   K TDFG++    E G+ +   V  GT  Y
Sbjct: 151 GLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 185 MAPELLGPCKYGKEIDIWSAGLILYNLL 212
           + PE     +  ++ D++S G++L+ +L
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVL 235

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 42/225 (18%)
Query: 79  CKSISKTSKSDEGYLKREHCDGGTLVDRISDRER----YTERAAASVFRSVVNALHACHS 134
            +  S  ++ D   ++ E+C+GG+L D IS+  R    + E     +   V   L   HS
Sbjct: 72  VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 135 NGIMHRDLKPEN-FIFTTDDENAT---------------LKATDFGLAFFFEEGKVYEEV 178
             ++H D+KP N FI  T   NA                 K  D G        +V E  
Sbjct: 132 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE-- 189
Query: 179 VGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPF------WAESLYGTLTAIM 231
            G   ++A E+L     +  + DI++  L +    +GA+P       W E   G L  I 
Sbjct: 190 -GDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEIRQGRLPRIP 247
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                        +S    +L++ M+  DP  + +   ++KH  L
Sbjct: 248 Q-----------VLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 281

>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax Cdpk, Pvx_11610 Length = 196

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 33/188 (17%)
Query: 288 IDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKA 347
           ID  ++   K +  M + +KLA+ +I +     ++QK K  F  +D    G +T  + + 
Sbjct: 20  IDIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRK 79
Query: 348 GLSKLGSTLTEVDVKQYMQAADIDGNGT--------------TLNLSLVQCKDTSLKDFN 393
           GL + G  L   +    +   D DG+G                L+  L+ C       F 
Sbjct: 80  GLERSGLMLPP-NFDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSKKLIYCA------FR 132
Query: 394 IFTKPSNILIRIMISIYITADELEAAFKEYNMG-----DDATIKEIMFEVDRDKDGRISY 448
           +F   ++  I        TA+     F     G     D   +K+++ EVD++ DG+I +
Sbjct: 133 VFDVDNDGEI-------TTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDF 185
Query: 449 EEFCATMK 456
            EF   MK
Sbjct: 186 YEFSEMMK 193

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 91  GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           GY+  E+  G +L  + S  ++     A +    ++ AL   HS G+++ DLKPEN + T
Sbjct: 159 GYIVMEYVGGQSL--KRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT 216
Query: 151 TDDENATLKATDFGLAFFFEE-GKVYEEVVGTPLYMAPELL--GPCKYGKEIDIWSAGLI 207
            +     LK  D G        G +Y    GTP + APE++  GP       DI++ G  
Sbjct: 217 EEQ----LKLIDLGAVSRINSFGYLY----GTPGFQAPEIVRTGPT---VATDIYTVGRT 265
Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDF--KSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           L             +L   L     R +D   + DP      S   L+RR +  DP  + 
Sbjct: 266 L------------AALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRF 313
Query: 266 TVAQ 269
           T A+
Sbjct: 314 TTAE 317

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 42/225 (18%)
Query: 79  CKSISKTSKSDEGYLKREHCDGGTLVDRISDRER----YTERAAASVFRSVVNALHACHS 134
            +  S  ++ D   ++ E+C+GG+L D IS+  R    + E     +   V   L   HS
Sbjct: 74  VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133
Query: 135 NGIMHRDLKPEN-FIFTTDDENAT---------------LKATDFGLAFFFEEGKVYEEV 178
             ++H D+KP N FI  T   NA                 K  D G        +V E  
Sbjct: 134 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE-- 191
Query: 179 VGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPF------WAESLYGTLTAIM 231
            G   ++A E+L     +  + DI++  L +    +GA+P       W E   G L  I 
Sbjct: 192 -GDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEIRQGRLPRIP 249
Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                        +S    +L++ M+  DP  + +   ++KH  L
Sbjct: 250 Q-----------VLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 283

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 123 RSVVNALHACHSN--GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG 180
           R ++  L   H+    I+HRDLK +N   T      ++K  D GLA   +     + V+G
Sbjct: 136 RQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLA-TLKRASFAKAVIG 192
Query: 181 TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFW----AESLYGTLTAIMSREID 236
           TP + APE     KY + +D+++ G       +   P+     A  +Y  +T+ + +   
Sbjct: 193 TPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGV-KPAS 250
Query: 237 FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE 279
           F     P +    K++I   + ++ + + ++  +L H +   E
Sbjct: 251 FDKVAIPEV----KEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 77/202 (38%), Gaps = 39/202 (19%)
Query: 52  TIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR---------------- 95
           T+  +L  G+ G +Y+       L  A K++ + +   E +LK                 
Sbjct: 35  TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 96  -------------EHCDGGTLVD--RISDRERYTERAAASVFRSVVNALHACHSNGIMHR 140
                        E+   G L+D  R  +RE  T      +   + +A+        +HR
Sbjct: 95  GVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHR 154
Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGK 197
           DL   N +     EN  +K  DFGL+     G  Y    G      + APE L    +  
Sbjct: 155 DLAARNCLV---GENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNTFSI 210
Query: 198 EIDIWSAGLILYNLLS-GAQPF 218
           + D+W+ G++L+ + + G  P+
Sbjct: 211 KSDVWAFGVLLWEIATYGMSPY 232

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 86  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 145
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 146 ---GENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 201
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 202 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 258
Query: 266 TVAQI 270
           + A+I
Sbjct: 259 SFAEI 263

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 87  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 146
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 147 ---GENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 202
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 203 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 259
Query: 266 TVAQI 270
           + A+I
Sbjct: 260 SFAEI 264

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 54/129 (41%), Gaps = 32/129 (24%)
Query: 114 TERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA------- 166
           TE    ++  +++  +   HS GI+HRDLKP N +   D    ++K  DFGLA       
Sbjct: 154 TELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQD---CSVKVCDFGLARTVDYPE 210
Query: 167 ------------------FFFEEGKVYEEVVG---TPLYMAPEL-LGPCKYGKEIDIWSA 204
                              F     +  ++ G   T  Y APEL L    Y + ID+WS 
Sbjct: 211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI 270
Query: 205 GLILYNLLS 213
           G I   LL+
Sbjct: 271 GCIFAELLN 279

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV--- 179
           + +   +   H+   +HR+L   N +    D +  +K  DFGLA    EG  Y  V    
Sbjct: 124 QQICEGMAYLHAQHYIHRNLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 180 GTPLY-MAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            +P++  APE L   K+    D+WS G+ LY LL+
Sbjct: 181 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG---TPL-YMAPEL 189
           S   +HRDL   N + T   E   LK +DFG++    +G VY    G    P+ + APE 
Sbjct: 231 SKCCIHRDLAARNCLVT---EKNVLKISDFGMSREEADG-VYAASGGLRQVPVKWTAPEA 286
Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           L   +Y  E D+WS G++L+   S GA P+
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGASPY 316

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 10/168 (5%)
Query: 58  CRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKREHCDGGTLVDRISDRERYT 114
           C  +S R     E  T  QF    I K       +  ++  E C  G L   +  R+   
Sbjct: 49  CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSL 108
Query: 115 ERAAASVFR-SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
           + A+  ++   +  AL    S   +HRD+   N + +++D    +K  DFGL+ + E+  
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDST 165
Query: 174 VYEEVVGT-PL-YMAPELLGPCKYGKEIDIWSAGLILYN-LLSGAQPF 218
             +   G  P+ +MAPE +   ++    D+W  G+ ++  L+ G +PF
Sbjct: 166 XXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 98  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 157
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 158 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 213
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 214 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 270
Query: 266 TVAQI 270
           + A+I
Sbjct: 271 SFAEI 275

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL- 183
           V   +    S   +HRDL   N + +   EN  +K  DFGLA    +   Y     T L 
Sbjct: 208 VARGMEFLSSRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 184 --YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
             +MAPE +    Y  + D+WS G++L+ + S G  P+
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY 302

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 90  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 149
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 150 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 205
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 206 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 266 TVAQI 270
           + A+I
Sbjct: 263 SFAEI 267

>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica Length = 134

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 15/133 (11%)
Query: 329 FKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLS-----LVQ 383
           FKQ+D N  G+++Y+E KA +S       E  ++   +A DIDGNG  ++L+        
Sbjct: 6   FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNG-EIDLAEFTKFAAA 64
Query: 384 CKDTSLKDFNIFTKPSNILIRIMISI---YITADELEAAFKEYNMGDDATIKEIMFEVDR 440
            K+  L D  +  K   IL ++M +     +T +E+   FK++  G +  + +IM + D 
Sbjct: 65  VKEQDLSDEKVGLK---ILYKLMDADGDGKLTKEEVTTFFKKF--GYEKVVDQIM-KADA 118
Query: 441 DKDGRISYEEFCA 453
           + DG I+ EEF A
Sbjct: 119 NGDGYITLEEFLA 131

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           ++R+ + E+ T +   S    +   +    S   +HRDL   N + T   EN  +K  DF
Sbjct: 146 INRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA         ++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 202 GLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 86  SKSDEGYLKREHCDGGTLVDRISDRERYTERAAA-SVFRSVVNALHACHSNGIMHRDLKP 144
           SK    Y+  E+   G L++ +    +  E +    +   V   +    S+  +HRDL  
Sbjct: 73  SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAA 132
Query: 145 ENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDI 201
            N +    D +  +K +DFG+  +  + + Y   VGT     + APE+    KY  + D+
Sbjct: 133 RNCLV---DRDLCVKVSDFGMTRYVLDDQ-YVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 202 WSAGLILYNLLS-GAQPF 218
           W+ G++++ + S G  P+
Sbjct: 189 WAFGILMWEVFSLGKMPY 206

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
           ++R+ + E+ T +   S    +   +    S   +HRDL   N + T   EN  +K  DF
Sbjct: 146 INRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 164 GLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           GLA         ++     L   +MAPE L    Y  + D+WS G++++ + + G  P+
Sbjct: 202 GLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 87  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 146
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 147 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 202
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 203 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 259
Query: 266 TVAQI 270
           + A+I
Sbjct: 260 SFAEI 264

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N + T        K  DFGLA   +    Y       L   +MAPE +
Sbjct: 186 SKNCIHRDLAARNILLT---HGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESI 242
Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
             C Y  E D+WS G+ L+ L S G+ P+
Sbjct: 243 FNCVYTFESDVWSYGIFLWELFSLGSSPY 271

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 87  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 146
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 147 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 202
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 203 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 259
Query: 266 TVAQI 270
           + A+I
Sbjct: 260 SFAEI 264

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 85  YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 144
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 145 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 200
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 201 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 266 TVAQI 270
           + A+I
Sbjct: 258 SFAEI 262

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 14/142 (9%)
Query: 80  KSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVF----RSVVNALHACHSN 135
           + +S      E  L  E+   G L D +   +R+  R  AS        +   +    S 
Sbjct: 74  RGVSYGPGRPELRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR 130
Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---VYEEVVGTPLYM-APELLG 191
             +HRDL   N +  ++   A +K  DFGLA      K   V  E   +P++  APE L 
Sbjct: 131 RCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 192 PCKYGKEIDIWSAGLILYNLLS 213
              + ++ D+WS G++LY L +
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFT 209

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 85  YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 144
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 145 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 200
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 201 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 266 TVAQI 270
           + A+I
Sbjct: 258 SFAEI 262

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 85  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 144
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 145 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 200
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 201 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 266 TVAQI 270
           + A+I
Sbjct: 258 SFAEI 262

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 85  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 144
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 145 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 200
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 201 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 266 TVAQI 270
           + A+I
Sbjct: 258 SFAEI 262

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 90  YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 149
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 150 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 205
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 206 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 266 TVAQI 270
           + A+I
Sbjct: 263 SFAEI 267

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 90  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 149
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 150 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 205
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 206 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 266 TVAQI 270
           + A+I
Sbjct: 263 SFAEI 267

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 150 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 89  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 148
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 149 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 204
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 205 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 261
Query: 266 TVAQI 270
           + A+I
Sbjct: 262 SFAEI 266

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
           E+ + +   S    V   +    S   +HRDL   N + T D+    +K  DFGLA    
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIH 201
Query: 171 EGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
                ++     L   +MAPE L    Y  + D+WS G++L+ + + G  P+
Sbjct: 202 HIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253

>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces Cerevisiae Length = 146

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 24/153 (15%)
Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN-- 373
           NL  E+I + KE F   D +++G+++  E    +  LG + +E +V   M   D+DGN  
Sbjct: 3   NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 374 ---GTTLNLSLVQCKDTS-----LKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM 425
                 L L   Q K        L+ F +F K  + L        I+A EL+      ++
Sbjct: 63  IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGL--------ISAAELKHVLT--SI 112
Query: 426 GD---DATIKEIMFEVDRDKDGRISYEEFCATM 455
           G+   DA + +++ EV  D  G I+ ++F A +
Sbjct: 113 GEKLTDAEVDDMLREVS-DGSGEINIQQFAALL 144

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 93  LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD 152
           ++  H D G+  D  + +          +   +   +    S+ ++H+DL   N +   D
Sbjct: 122 MRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRN-VLVYD 180
Query: 153 DENATLKATDFGLAFFFEE--GKVYEEVVGTPL----YMAPELLGPCKYGKEIDIWSAGL 206
             N  +K +D GL   F E     Y +++G  L    +MAPE +   K+  + DIWS G+
Sbjct: 181 KLN--VKISDLGL---FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 235
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREI 235
           +L+ + S G QP+   S    +  I +R++
Sbjct: 236 VLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 265

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPC 193
           ++HRDL   N +     EN  +K +DFG+  F  + + Y    GT     + +PE+    
Sbjct: 125 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 180
Query: 194 KYGKEIDIWSAGLILYNLLS-GAQPF 218
           +Y  + D+WS G++++ + S G  P+
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIPY 206

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 93  LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD 152
           ++  H D G+  D  + +          +   +   +    S+ ++H+DL   N +   D
Sbjct: 105 MRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRN-VLVYD 163
Query: 153 DENATLKATDFGLAFFFEE--GKVYEEVVGTPL----YMAPELLGPCKYGKEIDIWSAGL 206
             N  +K +D GL   F E     Y +++G  L    +MAPE +   K+  + DIWS G+
Sbjct: 164 KLN--VKISDLGL---FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 218
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREI 235
           +L+ + S G QP+   S    +  I +R++
Sbjct: 219 VLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 248

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPC 193
           ++HRDL   N +     EN  +K +DFG+  F  + + Y    GT     + +PE+    
Sbjct: 124 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 179
Query: 194 KYGKEIDIWSAGLILYNLLS-GAQPF 218
           +Y  + D+WS G++++ + S G  P+
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPY 205

>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 169

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 22/153 (14%)
Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +  A+EI++  + FK++D ++SG+L+ +EF + L +L        V++ +   D DGNG 
Sbjct: 13  HFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGE 68
Query: 376 TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISI-------YITADELEAAFKEY--NMG 426
                 ++     +  F++       L R    I       YI+  EL    K    N  
Sbjct: 69  VDFKEFIE----GVSQFSVKGDKEQKL-RFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 123
Query: 427 DDATIKEI----MFEVDRDKDGRISYEEFCATM 455
            D  +++I    +   D+D DGRIS+EEFCA +
Sbjct: 124 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 156

>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 170

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 22/153 (14%)
Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +  A+EI++  + FK++D ++SG+L+ +EF + L +L        V++ +   D DGNG 
Sbjct: 14  HFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGE 69
Query: 376 TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISI-------YITADELEAAFKEY--NMG 426
                 ++     +  F++       L R    I       YI+  EL    K    N  
Sbjct: 70  VDFKEFIE----GVSQFSVKGDKEQKL-RFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 124
Query: 427 DDATIKEI----MFEVDRDKDGRISYEEFCATM 455
            D  +++I    +   D+D DGRIS+EEFCA +
Sbjct: 125 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPC 193
           ++HRDL   N +     EN  +K +DFG+  F  + + Y    GT     + +PE+    
Sbjct: 127 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 182
Query: 194 KYGKEIDIWSAGLILYNLLS-GAQPF 218
           +Y  + D+WS G++++ + S G  P+
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGKIPY 208

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 85  YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 144
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 145 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 200
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 201 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 266 TVAQI 270
           + A+I
Sbjct: 258 SFAEI 262

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPC 193
           ++HRDL   N +     EN  +K +DFG+  F  + + Y    GT     + +PE+    
Sbjct: 124 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 179
Query: 194 KYGKEIDIWSAGLILYNLLS-GAQPF 218
           +Y  + D+WS G++++ + S G  P+
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPY 205

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPC 193
           ++HRDL   N +     EN  +K +DFG+  F  + + Y    GT     + +PE+    
Sbjct: 122 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 177
Query: 194 KYGKEIDIWSAGLILYNLLS-GAQPF 218
           +Y  + D+WS G++++ + S G  P+
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPY 203

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 90  YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 149
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 150 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 205
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 206 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 266 TVAQI 270
           + A+I
Sbjct: 263 SFAEI 267

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N + T        K  DFGLA   +    Y       L   +MAPE +
Sbjct: 179 SKNCIHRDLAARNILLT---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 235
Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
             C Y  E D+WS G+ L+ L S G+ P+
Sbjct: 236 FNCVYTFESDVWSYGIFLWELFSLGSSPY 264

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 85  YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 144
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 145 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 200
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 201 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 266 TVAQI 270
           + A+I
Sbjct: 258 SFAEI 262

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N + T        K  DFGLA   +    Y       L   +MAPE +
Sbjct: 163 SKNCIHRDLAARNILLT---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 219
Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
             C Y  E D+WS G+ L+ L S G+ P+
Sbjct: 220 FNCVYTFESDVWSYGIFLWELFSLGSSPY 248

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N + T        K  DFGLA   +    Y       L   +MAPE +
Sbjct: 181 SKNCIHRDLAARNILLT---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 237
Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
             C Y  E D+WS G+ L+ L S G+ P+
Sbjct: 238 FNCVYTFESDVWSYGIFLWELFSLGSSPY 266

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPC 193
           ++HRDL   N +     EN  +K +DFG+  F  + + Y    GT     + +PE+    
Sbjct: 144 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 199
Query: 194 KYGKEIDIWSAGLILYNLLS-GAQPF 218
           +Y  + D+WS G++++ + S G  P+
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGKIPY 225

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 149 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA   + +   V +     
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 151 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N + T        K  DFGLA   +    Y       L   +MAPE +
Sbjct: 186 SKNCIHRDLAARNILLT---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 242
Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
             C Y  E D+WS G+ L+ L S G+ P+
Sbjct: 243 FNCVYTFESDVWSYGIFLWELFSLGSSPY 271

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 93  LKREHCDGGTLVDRISDRERYTERAAASVF----RSVVNALHACHSNGIMHRDLKPENFI 148
           L  E+   G L D +   +R+  R  AS        +   +    S   +HRDL   N +
Sbjct: 90  LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 146
Query: 149 FTTDDENATLKATDFGLAFFFEEGKVY---EEVVGTPLY-MAPELLGPCKYGKEIDIWSA 204
             ++   A +K  DFGLA      K Y    E   +P++  APE L    + ++ D+WS 
Sbjct: 147 VESE---AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 203
Query: 205 GLILYNLLS 213
           G++LY L +
Sbjct: 204 GVVLYELFT 212

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 152 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA   + +   V +     
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 303

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA   + +   V +     
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 294

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 156 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 243

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA   + +   V +     
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 301

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA   + +   V +     
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA   + +   V +     
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 296

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA   + +   V +     
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 151 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 93  LKREHCDGGTLVDRISDRERYTERAAASVF----RSVVNALHACHSNGIMHRDLKPENFI 148
           L  E+   G L D +   +R+  R  AS        +   +    S   +HRDL   N +
Sbjct: 103 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 159
Query: 149 FTTDDENATLKATDFGLAFFFEEGKVY---EEVVGTPLY-MAPELLGPCKYGKEIDIWSA 204
             ++   A +K  DFGLA      K Y    E   +P++  APE L    + ++ D+WS 
Sbjct: 160 VESE---AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 216
Query: 205 GLILYNLLS 213
           G++LY L +
Sbjct: 217 GVVLYELFT 225

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 93  LKREHCDGGTLVDRISDRERYTERAAASVF----RSVVNALHACHSNGIMHRDLKPENFI 148
           L  E+   G L D +   +R+  R  AS        +   +    S   +HRDL   N +
Sbjct: 91  LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 147
Query: 149 FTTDDENATLKATDFGLAFFFEEGKVY---EEVVGTPLY-MAPELLGPCKYGKEIDIWSA 204
             ++   A +K  DFGLA      K Y    E   +P++  APE L    + ++ D+WS 
Sbjct: 148 VESE---AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 204
Query: 205 GLILYNLLS 213
           G++LY L +
Sbjct: 205 GVVLYELFT 213

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA   + +   V +     
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 151 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 150 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 151 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 98  CDGGTLVDRISDRERYTE-RAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           C G TL   + D +   +      + + +V  +   H+ GI+H+DLK +N  +    +N 
Sbjct: 111 CKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY----DNG 166
Query: 157 TLKATDFGL---AFFFEEGKVYEEVV---GTPLYMAPEL---LGP------CKYGKEIDI 201
            +  TDFGL   +   + G+  +++    G   ++APE+   L P        + K  D+
Sbjct: 167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDV 226
Query: 202 WSAGLILYNLLSGAQPF 218
           ++ G I Y L +   PF
Sbjct: 227 FALGTIWYELHAREWPF 243

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 170 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 257

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 23/156 (14%)
Query: 75  LQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACH- 133
           L F    ++  + S + +L   + + G+L D +  R+      A  +  S    L   H 
Sbjct: 65  LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQ-RQTLEPHLALRLAVSAACGLAHLHV 123
Query: 134 -------SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-----VGT 181
                     I HRD K  N +  +   N      D GLA    +G  Y ++     VGT
Sbjct: 124 EIFGTQGKPAIAHRDFKSRNVLVKS---NLQCCIADLGLAVMHSQGSDYLDIGNNPRVGT 180
Query: 182 PLYMAPELLGP-----C-KYGKEIDIWSAGLILYNL 211
             YMAPE+L       C +  K  DIW+ GL+L+ +
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA   + +   V +     
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 146 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 233

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY 184
           ++N +   HS   +HRD+KP+NF+         +   DFGLA  + +   ++ +   P  
Sbjct: 112 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHI---PYR 168
Query: 185 MAPELLGPCKYG-----------KEIDIWSAGLILYNLLSGAQPF 218
               L G  +Y            +  D+ S G +L   L G+ P+
Sbjct: 169 ENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 213

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 148 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 235

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG----TPL-YMAPE 188
           S   +HRDL   N + T   E   LK +DFG++   EE        G     P+ + APE
Sbjct: 231 SKCCIHRDLAARNCLVT---EKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPE 285
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   +Y  E D+WS G++L+   S GA P+
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFSLGASPY 316

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 169 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 256

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTP 182
           V   +    S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  
Sbjct: 134 VAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 190
Query: 183 L---YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           L   +MA E L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 191 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 230

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 210 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 297

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA   + +   V +     
Sbjct: 193 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 250 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA   + +   V +     
Sbjct: 158 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA   + +E        G  L   +MA E
Sbjct: 149 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA   + +   V +     
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 113 YTERAAAS--VFRSVVNALHAC------HSNGIMHRDLKPENFIFTTDDENATLKATDFG 164
           Y ER   S  V   V+ +L  C       S   +HRD+   N +  + +    +K  DFG
Sbjct: 114 YLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE---CVKLGDFG 170
Query: 165 LAFFFEEGKVYE-EVVGTPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQP-FWA 220
           L+ + E+   Y+  V   P+ +M+PE +   ++    D+W   + ++ +LS G QP FW 
Sbjct: 171 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 230
Query: 221 ES 222
           E+
Sbjct: 231 EN 232

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 113 YTERAAAS--VFRSVVNALHAC------HSNGIMHRDLKPENFIFTTDDENATLKATDFG 164
           Y ER   S  V   V+ +L  C       S   +HRD+   N +  + +    +K  DFG
Sbjct: 98  YLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE---CVKLGDFG 154
Query: 165 LAFFFEEGKVYE-EVVGTPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQP-FWA 220
           L+ + E+   Y+  V   P+ +M+PE +   ++    D+W   + ++ +LS G QP FW 
Sbjct: 155 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 214
Query: 221 ES 222
           E+
Sbjct: 215 EN 216

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 113 YTERAAAS--VFRSVVNALHAC------HSNGIMHRDLKPENFIFTTDDENATLKATDFG 164
           Y ER   S  V   V+ +L  C       S   +HRD+   N +  + +    +K  DFG
Sbjct: 102 YLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE---CVKLGDFG 158
Query: 165 LAFFFEEGKVYE-EVVGTPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQP-FWA 220
           L+ + E+   Y+  V   P+ +M+PE +   ++    D+W   + ++ +LS G QP FW 
Sbjct: 159 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 218
Query: 221 ES 222
           E+
Sbjct: 219 EN 220

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA     +E        G  L   +MA E
Sbjct: 152 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            L   K+  + D+WS G++L+ L++ GA P+
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239

>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w Length = 191

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 35/185 (18%)
Query: 292 IISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSK 351
           ++   K +  + K +KLA+ +I +     +++K K TF  +D +  G +T ++ K GL K
Sbjct: 21  VLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK 80
Query: 352 LGSTLTEVDVKQYMQAADIDGNG--------------TTLNLSLVQCKDTSLKDFNIFTK 397
            G  L   +    +   D DG+G                L+  L+ C       F +F  
Sbjct: 81  DGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCA------FRVFDV 133
Query: 398 PSNILIRIMISIYITADELEAAFKEYNMGDDAT------IKEIMFEVDRDKDGRISYEEF 451
            ++          IT  EL       N   + T      +K ++ +VD++ DG+I + EF
Sbjct: 134 DND--------GEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEF 185
Query: 452 CATMK 456
              MK
Sbjct: 186 SEMMK 190

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 83  YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 142
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  +    G      + APE L   K+  + D+W+ G+
Sbjct: 143 ---GENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 198
Query: 207 ILYNLLS-GAQPF 218
           +L+ + + G  P+
Sbjct: 199 LLWEIATYGMSPY 211

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-----VGTPLYMAPELL 190
            I HRDLK +N +     +N      D GLA    +     +V     VGT  YMAPE+L
Sbjct: 162 AIAHRDLKSKNILV---KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 191 GPC------KYGKEIDIWSAGLILYNL 211
                       K +DIW+ GL+L+ +
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEV 245

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-----VGTPLYMAPELL 190
            I HRDLK +N +     +N      D GLA    +     +V     VGT  YMAPE+L
Sbjct: 133 AIAHRDLKSKNILV---KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 191 GPC------KYGKEIDIWSAGLILYNL 211
                       K +DIW+ GL+L+ +
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-----VGTPLYMAPELL 190
            I HRDLK +N +     +N      D GLA    +     +V     VGT  YMAPE+L
Sbjct: 133 AIAHRDLKSKNILV---KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 191 GPC------KYGKEIDIWSAGLILYNL 211
                       K +DIW+ GL+L+ +
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216

>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica Length = 134

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 329 FKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ----C 384
           FK++D N  G ++Y+E KA +SK  +   E  ++   ++ D DGNG        +     
Sbjct: 6   FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDG 444
           +   L D  I  K    L+ +     +T +E+ + FK++ +     + E + + D + DG
Sbjct: 66  QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---EKVAEQVMKADANGDG 122
Query: 445 RISYEEF 451
            I+ EEF
Sbjct: 123 YITLEEF 129

>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From Entamoeba Histolytica: A Novel Arrangement Of Ef Hand Motifs Length = 134

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 329 FKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ----C 384
           FK++D N  G ++Y+E KA +SK  +   E  ++   ++ D DGNG        +     
Sbjct: 6   FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDG 444
           +   L D  I  K    L+ +     +T +E+ + FK++ +     + E + + D + DG
Sbjct: 66  QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---EKVAEQVMKADANGDG 122
Query: 445 RISYEEF 451
            I+ EEF
Sbjct: 123 YITLEEF 129

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 96  EHCDGGTLVDRISDRERYTER----AAASVFRSVVNALHACH----------SNGIMHRD 141
           E+C  G L++ +  + R  E     A A+   S  + LH             S   +HRD
Sbjct: 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRD 189
Query: 142 LKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL-YMAPELLGPCKYGKE 198
           +   N + T        K  DFGLA     +   + +     P+ +MAPE +  C Y  +
Sbjct: 190 VAARNVLLTNGH---VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 246
Query: 199 IDIWSAGLILYNLLS-GAQPF 218
            D+WS G++L+ + S G  P+
Sbjct: 247 SDVWSYGILLWEIFSLGLNPY 267

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA     +   V +     
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA     +   V +     
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242

>pdb|2LMT|A Chain A, Nmr Structure Of Androcam Length = 148

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 25/150 (16%)
Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT 376
           L  E+I + K+ F Q D   +G +   E    +  LG   TE +++  +  A+ + NG  
Sbjct: 4   LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNG-Q 62
Query: 377 LNLSLV------QCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNM 425
           LN +        Q ++T  ++     F IF +  +         +I+  EL   F   N+
Sbjct: 63  LNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGD--------GFISPAEL--RFVMINL 112
Query: 426 GD---DATIKEIMFEVDRDKDGRISYEEFC 452
           G+   D  I E++ E D D DG I+YEEF 
Sbjct: 113 GEKVTDEEIDEMIREADFDGDGMINYEEFV 142

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA     +   V +     
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 96  EHCDGGTLVDRISDRERYTER----AAASVFRSVVNALHACH----------SNGIMHRD 141
           E+C  G L++ +  + R  E     A A+   S  + LH             S   +HRD
Sbjct: 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRD 189
Query: 142 LKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPL-YMAPELLGPCKYGKE 198
           +   N + T        K  DFGLA     +   + +     P+ +MAPE +  C Y  +
Sbjct: 190 VAARNVLLTNGH---VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 246
Query: 199 IDIWSAGLILYNLLS-GAQPF 218
            D+WS G++L+ + S G  P+
Sbjct: 247 SDVWSYGILLWEIFSLGLNPY 267

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA     +   V +     
Sbjct: 156 QVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGT 181
            V   +    S   +HRDL   N + +   E   +K  DFGLA     +   V +     
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 182 PL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           PL +MAPE +    Y  + D+WS G++L+ + S GA P+
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HR+L   N + 
Sbjct: 292 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV 351
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 352 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 407
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 408 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 464
Query: 266 TVAQI 270
           + A+I
Sbjct: 465 SFAEI 469

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HR+L   N + 
Sbjct: 331 YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV 390
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G  Y    G      + APE L   K+  + D+W+ G+
Sbjct: 391 ---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 446
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 447 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 503
Query: 266 TVAQI 270
           + A+I
Sbjct: 504 SFAEI 508

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE--V 178
           + R V   +        +HRDL   N +     EN  +K  DFGL+        Y+    
Sbjct: 179 IARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLSRNIYSADYYKADGN 235
Query: 179 VGTPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWA 220
              P+ +M PE +   +Y  E D+W+ G++L+ + S G QP++ 
Sbjct: 236 DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FF 168
           E+ + R        V   +    S   +HRD+   N + T        K  DFGLA    
Sbjct: 161 EQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIM 217
Query: 169 FEEGKVYEEVVGTPL-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
            +   + +     P+ +MAPE +  C Y  + D+WS G++L+ + S G  P+
Sbjct: 218 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269

>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal Domain (W81-S161) Of Calcium Vector Protein From Amphioxus Length = 81

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGST-LTEVDVKQYMQAADIDGNG 374
           EEI +    FK  D N  G + +DEFK  + K+G   LT+ +V++ M+ AD DGNG
Sbjct: 8   EEILR---AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNG 60

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA--FFFEEGKVYEEVVGTP 182
           V   +    S   +HRD+   N + T        K  DFGLA     +   + +     P
Sbjct: 169 VAQGMAFLASKNCIHRDVAARNVLLTN---GHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 183 L-YMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPF 218
           + +MAPE +  C Y  + D+WS G++L+ + S G  P+
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263

>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 36/162 (22%)
Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +L  EEI++ +E F++ D +  G +   +    +  +G   TE+++ +  Q  +++  G 
Sbjct: 4   SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 376 TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATI---- 431
                          DF+ F +     +    +  I   EL  AF+E++   D  I    
Sbjct: 64  V--------------DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSE 109
Query: 432 ------------------KEIMFEVDRDKDGRISYEEFCATM 455
                             +EI+ +VD + DGR+ +EEF   M
Sbjct: 110 LREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151

>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 36/162 (22%)
Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +L  EEI++ +E F++ D +  G +   +    +  +G   TE+++ +  Q  +++  G 
Sbjct: 4   SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 376 TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATI---- 431
                          DF+ F +     +    +  I   EL  AF+E++   D  I    
Sbjct: 64  V--------------DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSE 109
Query: 432 ------------------KEIMFEVDRDKDGRISYEEFCATM 455
                             +EI+ +VD + DGR+ +EEF   M
Sbjct: 110 LREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 13/185 (7%)
Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y+  E    G L+D + +  R    A   ++ +  + +A+        +HRDL   N + 
Sbjct: 90  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 149
Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELLGPCKYGKEIDIWSAGL 206
               EN  +K  DFGL+     G       G      + APE L   K+  + D+W+ G+
Sbjct: 150 ---GENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 205
Query: 207 ILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           +L+ + + G  P+    L      +   E D++ +          +L+R     +P+++ 
Sbjct: 206 LLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 266 TVAQI 270
           + A+I
Sbjct: 263 SFAEI 267

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	483
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-165
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-164
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-163
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-162
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-140
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-127
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-124
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-123
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-119
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-115
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-115
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-114
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-113
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-112
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-111
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-110
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-110
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-109
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-109
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-106
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-106
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-105
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-105
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-104
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-104
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-103
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-102
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-102
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-99
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-98
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-96
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-95
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-93
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	7e-63
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-62
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-61
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	8e-61
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-60
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-60
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-60
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-58
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-57
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-56
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-56
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-56
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	5e-56
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	8e-56
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-55
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-55
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-55
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-55
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-55
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	7e-55
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-54
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	6e-54
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	7e-54
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	9e-54
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-04
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-53
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-53
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-53
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-53
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	6e-53
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-52
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-52
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-52
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	2e-51
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-51
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-50
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-49
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-49
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-49
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	7e-49
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	1e-48
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-46
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-45
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	7e-45
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	2e-43
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	4e-43
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-42
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-38
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	1e-38
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	5e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-37
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	5e-37
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	6e-37
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-35
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	5e-35
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-34
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-34
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-34
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	4e-33
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-33
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	2e-32
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	2e-07
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	9e-32
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-31
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	3e-31
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-30
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-30
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-30
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-30
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-30
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-30
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	6e-30
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	9e-30
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	1e-29
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	5e-06
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-29
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-29
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-29
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-29
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-29
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-29
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-29
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-29
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	5e-29
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	5e-29
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	8e-29
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	8e-29
2jnf_A	158	Troponin C; stretch activated muscle contraction,	1e-28
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-28
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-28
3fwb_A	161	Cell division control protein 31; gene gating, com	1e-28
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-28
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	2e-28
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-28
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-28
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-28
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-28
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	3e-28
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	4e-28
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	4e-28
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	1e-05
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	5e-28
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	6e-28
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	6e-28
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	7e-28
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	9e-28
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	9e-28
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-27
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-27
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	4e-27
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-27
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-27
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-27
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-27
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	8e-27
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	9e-27
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	9e-27
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-26
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-26
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-26
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-26
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-26
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-26
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-26
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	6e-26
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	6e-26
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	9e-26
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	1e-25
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	1e-04
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-25
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	2e-25
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	8e-04
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-25
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-25
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	5e-25
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	5e-25
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	6e-25
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-24
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-24
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-24
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-24
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-24
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	4e-24
3aln_A	327	Dual specificity mitogen-activated protein kinase;	5e-24
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-23
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	2e-23
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	6e-09
3uqc_A	286	Probable conserved transmembrane protein; structur	6e-23
1y1x_A	191	Leishmania major homolog of programmed cell death	7e-23
1y1x_A	191	Leishmania major homolog of programmed cell death	3e-10
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	1e-22
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	2e-22
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	2e-06
2hps_A	186	Coelenterazine-binding protein with bound coelent;	5e-22
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	1e-21
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	5e-06
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	5e-04
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	7e-21
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	6e-04
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	9e-21
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	8e-05
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-20
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-20
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-20
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	3e-20
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	8e-08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	4e-20
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	5e-20
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	6e-20
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	6e-20
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	7e-20
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	7e-20
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-19
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-19
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-19
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	2e-19
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-19
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-19
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	2e-19
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	2e-19
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	5e-19
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	9e-19
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	2e-18
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	7e-06
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-18
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	2e-18
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	2e-04
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-18
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	4e-18
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	5e-18
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	5e-18
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	1e-17
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	7e-06
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	2e-17
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	1e-09
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	1e-06
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	2e-17
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	9e-05
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	2e-17
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	8e-13
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	2e-05
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	3e-17
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	5e-17
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	2e-12
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	6e-04
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	7e-17
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	1e-16
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	1e-16
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	2e-16
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	1e-12
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-16
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-16
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	2e-16
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	2e-16
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	2e-16
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-16
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	4e-16
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	5e-16
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	7e-06
3li6_A	66	Calcium-binding protein; calcium signaling protein	5e-16
3li6_A	66	Calcium-binding protein; calcium signaling protein	2e-07
3li6_A	66	Calcium-binding protein; calcium signaling protein	7e-04
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	6e-16
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	4e-05
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	7e-16
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	1e-04
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	8e-16
3soc_A	322	Activin receptor type-2A; structural genomics cons	8e-16
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	1e-15
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	4e-04
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	1e-15
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	2e-15
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	2e-15
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	4e-07
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	3e-15
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	6e-04
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	3e-15
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	1e-11
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	6e-15
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	6e-15
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	2e-08
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	1e-14
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	9e-06
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-14
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	6e-14
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	4e-04
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	6e-14
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	5e-04
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	9e-14
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	1e-07
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	2e-13
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	3e-04
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	3e-13
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	4e-13
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	3e-04
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	3e-12
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	8e-04
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	3e-12
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	2e-06
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	8e-12
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	4e-11
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	9e-12
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	3e-07
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	9e-12
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	4e-04
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	2e-11
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	8e-06
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	3e-11
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	6e-09
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	3e-11
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	1e-09
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	5e-11
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	7e-08
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	6e-11
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	2e-07
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	1e-10
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	3e-04
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	1e-10
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	2e-09
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	1e-10
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	2e-04
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	3e-10
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	5e-07
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	9e-10
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	9e-05
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	1e-09
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	2e-06
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	2e-09
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	8e-04
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	2e-09
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	2e-09
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	5e-09
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	1e-04
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	9e-09
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	4e-07
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	2e-08
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	6e-05
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	7e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-08
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-08
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	3e-08
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	5e-04
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	2e-07
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	4e-06
1c07_A	95	Protein (epidermal growth factor receptor pathway	2e-07
1c07_A	95	Protein (epidermal growth factor receptor pathway	2e-06
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	3e-07
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	5e-07
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	6e-07
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	7e-07
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	2e-06
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	8e-07
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	8e-07
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	1e-06
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-06
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-06
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	1e-06
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	2e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-06
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-06
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-06
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-06
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-06
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	4e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-06
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	4e-06
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-06
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	5e-06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	6e-06
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	7e-06
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	2e-05
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	9e-06
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	5e-05
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-05
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-05
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-05
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	2e-05
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	2e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-05
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	3e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	4e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	5e-05
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	5e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	5e-05
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	5e-05
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	8e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	6e-05
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	7e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	7e-05
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	7e-05
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	2e-04
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	8e-05
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	8e-05
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	8e-05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	9e-05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-04
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	1e-04
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	1e-04
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	1e-04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-04
2jq6_A	139	EH domain-containing protein 1; metal binding prot	1e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-04
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-04
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-04
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-04
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-04
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-04
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	3e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-04
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-04
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-04
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	5e-04
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	6e-04
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	6e-04
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	6e-04
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	7e-04
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	9e-04

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  474 bits (1221), Expect = e-165
 Identities = 132/479 (27%), Positives = 212/479 (44%), Gaps = 66/479 (13%)

Query: 37  DTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYL 93
              +  +       +     L +G  G + LC +  TG + A K ISK     K+D+  L
Sbjct: 14  GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73

Query: 94  KRE------------------------------HCDGGTLVDRISDRERYTERAAASVFR 123
            RE                                 GG L D I  R+R++E  AA + R
Sbjct: 74  LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 133

Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL 183
            V++ +   H N I+HRDLKPEN +  +  ++A ++  DFGL+  FE  K  ++ +GT  
Sbjct: 134 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 193

Query: 184 YMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP 243
           Y+APE+L    Y ++ D+WS G+ILY LLSG  PF   + Y  L  +   +  F+   W 
Sbjct: 194 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 252

Query: 244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWL--NYENGEAWDRPIDTAIISRVKQFRA 301
            +S SAKDLIR+ML   P+ +I+    L H W+    +   + D P     I  ++QF+ 
Sbjct: 253 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQG 312

Query: 302 MSKLKKLALKVIVENLP-AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSK--------- 351
             KL + AL  +   L   +E ++    F +MD N  G L   E   G  +         
Sbjct: 313 TQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDA 372

Query: 352 --LGSTLTEVDVKQYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSN 400
             L ++  E +V Q + A D D NG           ++   +  ++   + F +F   ++
Sbjct: 373 SMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNS 432

Query: 401 ILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
                     I++ EL   F   ++ D  T K ++ EVD++ DG + ++EF   +    
Sbjct: 433 --------GKISSTELATIFGVSDV-DSETWKSVLSEVDKNNDGEVDFDEFQQMLLKLC 482

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  473 bits (1219), Expect = e-164
 Identities = 115/510 (22%), Positives = 206/510 (40%), Gaps = 73/510 (14%)

Query: 16  QQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGL 75
                +       +     +    + K    I   +    +L  G  G + LC E +   
Sbjct: 3   HHHHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHS 62

Query: 76  QFACKSISK-------------TSKSDEGYLKRE-------------------------- 96
           + A K I K               +     +  E                          
Sbjct: 63  EKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFY 122

Query: 97  ----HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD 152
                 +GG L ++I +R ++ E  AA++ + +++ +   H + I+HRD+KPEN +    
Sbjct: 123 LVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK 182

Query: 153 DENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLL 212
           +    +K  DFGL+ FF +     + +GT  Y+APE+L   KY ++ D+WS G+I+Y LL
Sbjct: 183 NSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILL 241

Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
            G  PF  ++    +  +   +  F  + W  IS  AK+LI+ ML  D N + T  + L 
Sbjct: 242 CGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301

Query: 273 HPWL--NYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENL-PAEEIQKHKETF 329
             W+     N    D+      +S +++F    KL + A+  I   L   EE ++  + F
Sbjct: 302 SRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIF 361

Query: 330 KQMDTNDSGTLTYDEFKAGLSKLGST--------LTEVDVKQYMQAADIDGNGT------ 375
           K++D N  G L   E   G + L +           E +V   ++  D D NG       
Sbjct: 362 KKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEF 421

Query: 376 ---TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIK 432
               ++  ++  ++   + FN+F    +          IT +EL   F   ++  + T  
Sbjct: 422 ISVCMDKQILFSEERLRRAFNLFDTDKS--------GKITKEELANLFGLTSI-SEKTWN 472

Query: 433 EIMFEVDRDKDGRISYEEFCATMKTGTHLR 462
           +++ E D++KD  I ++EF + M      +
Sbjct: 473 DVLGEADQNKDNMIDFDEFVSMMHKICDHK 502

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  470 bits (1211), Expect = e-163
 Identities = 133/497 (26%), Positives = 216/497 (43%), Gaps = 63/497 (12%)

Query: 16  QQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGL 75
                + + +++   D        +      +   +   ++L  G  G + LC +  T +
Sbjct: 4   HHHHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHV 63

Query: 76  QFACKSISKT--SKSDEGYLKRE------------------------------HCDGGTL 103
           + A K I KT  S S    L  E                                 GG L
Sbjct: 64  ERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL 123

Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
            D I  R ++ E  AA + + V++ +   H + I+HRDLKPEN +  + +++A +K  DF
Sbjct: 124 FDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDF 183

Query: 164 GLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL 223
           GL+  FE  K  +E +GT  Y+APE+L   KY ++ D+WS G+IL+ LL+G  PF  ++ 
Sbjct: 184 GLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTD 242

Query: 224 YGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL---NYEN 280
              L  +   +  F S  W  +S  AKDLI++ML  D   +I+  Q L+HPW+     + 
Sbjct: 243 QEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKK 302

Query: 281 GEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENL-PAEEIQKHKETFKQMDTNDSGT 339
               + P     I  +++F+   KL + AL  +   L   EE ++  + F+ +D N  G 
Sbjct: 303 ESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQ 362

Query: 340 LTYDEFKAGLSKLGS--------TLTEVDVKQYMQAADIDGNGT---------TLNLSLV 382
           L   E   G SKL             E +V   + AAD D NG           ++   +
Sbjct: 363 LDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSL 422

Query: 383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDK 442
             KD     F  F +  N          I+ DEL + F   ++ +  T KE++  +D + 
Sbjct: 423 LSKDKLESAFQKFDQDGN--------GKISVDELASVFGLDHL-ESKTWKEMISGIDSNN 473

Query: 443 DGRISYEEFCATMKTGT 459
           DG + +EEFC  ++   
Sbjct: 474 DGDVDFEEFCKMIQKLC 490

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  468 bits (1206), Expect = e-162
 Identities = 128/475 (26%), Positives = 218/475 (45%), Gaps = 69/475 (14%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--SKSDEGYLKRE------ 96
                 + I   L +G  G +  C +  T  ++A K I+K      D   + RE      
Sbjct: 18  GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77

Query: 97  ------------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHAC 132
                                      GG L D I  R+R++E  AA + + V + +   
Sbjct: 78  LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           H + I+HRDLKPEN +  + +++  +K  DFGL+  F++    ++ +GT  Y+APE+L  
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
             Y ++ D+WSAG+ILY LLSG  PF+ ++ Y  L  + + +  F    W TIS  AKDL
Sbjct: 198 -TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256

Query: 253 IRRMLIRDPNNQITVAQILKHPWL---NYENGEAWDRPIDTAIISRVKQFRAMSKLKKLA 309
           IR+ML   P+ +IT  Q L+HPW+   + E     D P   + ++ ++QF+A  KL + A
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAA 316

Query: 310 LKVIVENL-PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL--------------GS 354
           L  +   L   +E ++  E F+++DTN+ G L  DE   G  +                 
Sbjct: 317 LLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEG 376

Query: 355 TLTEVDVKQYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRI 405
           +  E  +   M   D+DG+G+          ++ +++  ++   + F +F K  +     
Sbjct: 377 STIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGS----- 431

Query: 406 MISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
                I+  EL   F + +       ++ I+ +VD +KDG + + EF   ++   
Sbjct: 432 ---GKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNFV 483

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  410 bits (1055), Expect = e-140
 Identities = 109/451 (24%), Positives = 180/451 (39%), Gaps = 53/451 (11%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--SKSDEGYLKRE------ 96
                 + + EEL +G    +  C +   G ++A   I+    S  D   L+RE      
Sbjct: 7   TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL 66

Query: 97  --H----------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHAC 132
             H                        GG L + I  RE Y+E  A+   + ++ A+  C
Sbjct: 67  LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 126

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLG 191
           H  G++HR+LKPEN +  +  + A +K  DFGLA   E E + +    GTP Y++PE+L 
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 186

Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD 251
              YGK +D+W+ G+ILY LL G  PFW E  +     I +   DF S  W T++  AKD
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 246

Query: 252 LIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALK 311
           LI +ML  +P+ +IT A+ LKHPW++               +  +K+F A  KLK   L 
Sbjct: 247 LINKMLTINPSKRITAAEALKHPWIS-HRSTVASCMHRQETVDCLKKFNARRKLKGAILT 305

Query: 312 VIVEN--LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAAD 369
           V++        + +  K T + ++   +G   ++ +        +      +   ++  D
Sbjct: 306 VMLATRNFSVRKQEIIKVTEQLIEAISNG--DFESYTKMCDPGMTAFEPEALGNLVEGLD 363

Query: 370 IDGNG--TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGD 427
                     + +      T L                  S  I    +        +  
Sbjct: 364 FHRFYFENLWSRNSKPVHTTILNPHIHLMGDE--------SACIAYIRITQYLDAGGIPR 415

Query: 428 DATIKEIMFEVDRDKDGRISYEEFCATMKTG 458
             T +     V   +DG+    +     ++G
Sbjct: 416 --TAQSEETRVWHRRDGKW---QIVHFHRSG 441

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  374 bits (962), Expect = e-127
 Identities = 98/348 (28%), Positives = 149/348 (42%), Gaps = 37/348 (10%)

Query: 39  ILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--SKSDEGYLKRE 96
            +  A      ++ + EEL +G    +  C   +TGL+FA K I+    S  D   L+RE
Sbjct: 19  FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78

Query: 97  --------H----------------------CDGGTLVDRISDRERYTERAAASVFRSVV 126
                   H                        GG L + I  RE Y+E  A+   + ++
Sbjct: 79  ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL 138

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMA 186
            ++  CHSNGI+HR+LKPEN +  +  + A +K  DFGLA    + + +    GTP Y++
Sbjct: 139 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLS 198

Query: 187 PELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS 246
           PE+L    Y K +DIW+ G+ILY LL G  PFW E  +     I +   D+ S  W T++
Sbjct: 199 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVT 258

Query: 247 SSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLK 306
             AK LI  ML  +P  +IT  Q LK PW+                +  +K+F A  KLK
Sbjct: 259 PEAKSLIDSMLTVNPKKRITADQALKVPWIC-NRERVASAIHRQDTVDCLKKFNARRKLK 317

Query: 307 KLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS 354
              L  ++       + ++             +    E       +  
Sbjct: 318 GAILTTMIATRNLSNLGRN---LLNKKEQGPPSTIK-ESSESSQTIDD 361

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  365 bits (938), Expect = e-124
 Identities = 99/343 (28%), Positives = 143/343 (41%), Gaps = 44/343 (12%)

Query: 37  DTILGKAYEDIKL--HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-----SKSD 89
             IL  A +D+     + + E + +G    +  C    TG QFA K +            
Sbjct: 10  GGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLS 69

Query: 90  EGYLKRE--------H----------------------CDGGTLVDRISDRER----YTE 115
              LKRE        H                       DG  L   I  R      Y+E
Sbjct: 70  TEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE 129

Query: 116 RAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKV 174
             A+   R ++ AL  CH N I+HRD+KP   +  + + +A +K   FG+A    E G V
Sbjct: 130 AVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV 189

Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE 234
               VGTP +MAPE++    YGK +D+W  G+IL+ LLSG  PF+          I+  +
Sbjct: 190 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGK 248

Query: 235 IDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIIS 294
                  W  IS SAKDL+RRML+ DP  +ITV + L HPWL  E      +      + 
Sbjct: 249 YKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK-ERDRYAYKIHLPETVE 307

Query: 295 RVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDS 337
           ++++F A  KLK   L  +  +          E       + +
Sbjct: 308 QLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSEDPT 350

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  362 bits (930), Expect = e-123
 Identities = 103/311 (33%), Positives = 152/311 (48%), Gaps = 32/311 (10%)

Query: 35  DDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------- 87
            D  I G   + +   F +  EL RG +  +Y C +  T   +A K + KT         
Sbjct: 39  PDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTE 98

Query: 88  ---------------------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVV 126
                                  E  L  E   GG L DRI ++  Y+ER AA   + ++
Sbjct: 99  IGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL 158

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMA 186
            A+   H NGI+HRDLKPEN ++ T   +A LK  DFGL+   E   + + V GTP Y A
Sbjct: 159 EAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCA 218

Query: 187 PELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE-SLYGTLTAIMSREIDFKSDPWPTI 245
           PE+L  C YG E+D+WS G+I Y LL G +PF+ E         I++ E  F S  W  +
Sbjct: 219 PEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEV 278

Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKL 305
           S +AKDL+R++++ DP  ++T  Q L+HPW+    G+A +         ++++F A  KL
Sbjct: 279 SLNAKDLVRKLIVLDPKKRLTTFQALQHPWV---TGKAANFVHMDTAQKKLQEFNARRKL 335

Query: 306 KKLALKVIVEN 316
           K     V+  +
Sbjct: 336 KAAVKAVVASS 346

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  353 bits (908), Expect = e-119
 Identities = 94/370 (25%), Positives = 154/370 (41%), Gaps = 41/370 (11%)

Query: 7   KSQDSDSAAQQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIY 66
             Q    A       P                +  K    I  +   ++ L  G +G++ 
Sbjct: 20  PPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVL 79

Query: 67  LCTENSTGLQFACKSISKTSKS------------------------DEGYLKR------E 96
                 T  +FA K +    K+                        +    ++      E
Sbjct: 80  QIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 139

Query: 97  HCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
             DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HRD+KPEN ++T+   
Sbjct: 140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 199

Query: 155 NATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
           NA LK TDFG A              TP Y+APE+LGP KY K  D+WS G+I+Y LL G
Sbjct: 200 NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259

Query: 215 AQPFWAESLYGT----LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
             PF++           T I   + +F +  W  +S   K LIR +L  +P  ++T+ + 
Sbjct: 260 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 319

Query: 271 LKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFK 330
           + HPW+  ++ +    P+ T+ + +  + R     +++   +    +  E+I+      K
Sbjct: 320 MNHPWIM-QSTKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIK----IKK 374

Query: 331 QMDTNDSGTL 340
             D ++   L
Sbjct: 375 IEDASNPLLL 384

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  342 bits (879), Expect = e-115
 Identities = 93/328 (28%), Positives = 148/328 (45%), Gaps = 48/328 (14%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT------SKSDEGYLKRE-- 96
           E++  ++   EEL  G+   +  C E STGLQ+A K I K              ++RE  
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66

Query: 97  ------H----------------------CDGGTLVDRISDRERYTERAAASVFRSVVNA 128
                 H                        GG L D ++++E  TE  A    + ++N 
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126

Query: 129 LHACHSNGIMHRDLKPENFIFTT-DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
           ++  HS  I H DLKPEN +    +     +K  DFGLA   + G  ++ + GTP ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186

Query: 188 ELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS 247
           E++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   S+
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA 246

Query: 248 SAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKK 307
            AKD IRR+L++DP  ++T+   L+HPW+  ++            +SR      M K KK
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD--------TQQALSRKASAVNMEKFKK 298

Query: 308 LALKVIVENLPAEEIQKHKETFKQMDTN 335
            A +    N     +    + F+     
Sbjct: 299 FAARKKSNNGSGGGL---NDIFEAQKIE 323

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  338 bits (870), Expect = e-114
 Identities = 72/324 (22%), Positives = 131/324 (40%), Gaps = 38/324 (11%)

Query: 24  LHVHVYDDDDDD--DDTILGKAYEDIKLHFTIA-EELCRGESGRIYLCTENSTGLQFACK 80
           +H H +     D   + +  ++ E+    + +  +EL RG+   +  C   STG ++A K
Sbjct: 1   MHHHHHHSSGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAK 60

Query: 81  SISKT--SKSDEGYLKRE--------H-----------------------CDGGTLVDRI 107
            + K    +     +  E                                  GG +    
Sbjct: 61  FLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLC 120

Query: 108 SDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL 165
                E  +E     + + ++  ++  H N I+H DLKP+N + ++      +K  DFG+
Sbjct: 121 LPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180

Query: 166 AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG 225
           +          E++GTP Y+APE+L         D+W+ G+I Y LL+   PF  E    
Sbjct: 181 SRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE 240

Query: 226 TLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWD 285
           T   I    +D+  + + ++S  A D I+ +L+++P  + T    L H WL   + E   
Sbjct: 241 TYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLF 300

Query: 286 RPIDTAIISRVKQFRAMSKLKKLA 309
            P +T+  S+ +     S   K +
Sbjct: 301 HPEETSSSSQTQDHSVRSSEDKTS 324

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  336 bits (865), Expect = e-113
 Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 38/314 (12%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE-------- 96
           +++   + IAE+L RGE G ++ C E S+   +  K +     +D+  +K+E        
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIAR 59

Query: 97  H----------------------CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACH 133
           H                        G  + +RI+       ER   S    V  AL   H
Sbjct: 60  HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPC 193
           S+ I H D++PEN I+ T   ++T+K  +FG A   + G  +  +   P Y APE+    
Sbjct: 120 SHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHD 178

Query: 194 KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI 253
                 D+WS G ++Y LLSG  PF AE+    +  IM+ E  F  + +  IS  A D +
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFV 238

Query: 254 RRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVI 313
            R+L+++  +++T ++ L+HPWL  +        + T +I  +K  R    L K  L ++
Sbjct: 239 DRLLVKERKSRMTASEALQHPWLKQK-----IERVSTKVIRTLKHRRYYHTLIKKDLNMV 293

Query: 314 VENLPAEEIQKHKE 327
           V           + 
Sbjct: 294 VSAARISCGGAIRS 307

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  333 bits (857), Expect = e-112
 Identities = 77/327 (23%), Positives = 144/327 (44%), Gaps = 39/327 (11%)

Query: 40  LGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------- 88
           L +        + + E++  G       C   +T ++FA K I K+ +            
Sbjct: 13  LHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRY 72

Query: 89  ----------------DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHAC 132
                              Y+  E   GG L+D+I  ++ ++ER A++V  ++   +   
Sbjct: 73  GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYL 132

Query: 133 HSNGIMHRDLKPENFIFTTDDENA-TLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPELL 190
           H+ G++HRDLKP N ++  +  N  +++  DFG A     E  +      T  ++APE+L
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 192

Query: 191 GPCKYGKEIDIWSAGLILYNLLSGAQPFWA---ESLYGTLTAIMSREIDFKSDPWPTISS 247
               Y    DIWS G++LY +L+G  PF     ++    L  I S +       W ++S 
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSD 252

Query: 248 SAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQ------FRA 301
           +AKDL+ +ML  DP+ ++T A +L+HPW+     +     ++      + +      + A
Sbjct: 253 TAKDLVSKMLHVDPHQRLTAALVLRHPWIV-HWDQLPQYQLNRQDAPHLVKGAMAATYSA 311

Query: 302 MSKLKKLALKVIVENLPAEEIQKHKET 328
           +++ +   L+ +  +  A+     K T
Sbjct: 312 LNRNQSPVLEPVGRSTLAQRRGIKKIT 338

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  333 bits (855), Expect = e-111
 Identities = 94/347 (27%), Positives = 156/347 (44%), Gaps = 40/347 (11%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGY------LKRE-- 96
           + ++  + I EEL  G+   +  C E STGL++A K I K              ++RE  
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 97  ------H----------------------CDGGTLVDRISDRERYTERAAASVFRSVVNA 128
                 H                        GG L D ++ +E  +E  A S  + +++ 
Sbjct: 68  ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127

Query: 129 LHACHSNGIMHRDLKPENFIFTT-DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
           ++  H+  I H DLKPEN +    +     +K  DFGLA   E+G  ++ + GTP ++AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187

Query: 188 ELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS 247
           E++     G E D+WS G+I Y LLSGA PF  ++   TL  I +   DF  + +   S 
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSE 247

Query: 248 SAKDLIRRMLIRDPNNQITVAQILKHPWL-NYENGEAWDRPIDTAIISRVKQFRAMSKLK 306
            AKD IR++L+++   ++T+ + L+HPW+   +  +A  R      +   K+     + K
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQYVRRRWK 307

Query: 307 KLALKVIVEN-LPAEEIQK-HKETFKQMDTNDSGTLTYDEFKAGLSK 351
                V + N L    ++K H  T + +   +S T      +  L  
Sbjct: 308 LSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESDTEENIARRKALHP 354

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  329 bits (846), Expect = e-110
 Identities = 83/304 (27%), Positives = 136/304 (44%), Gaps = 47/304 (15%)

Query: 55  EELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------- 89
           + L  G       C    +   FA K ISK  +++                         
Sbjct: 17  KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFH 76

Query: 90  ---EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPEN 146
                +L  E  +GG L +RI  ++ ++E  A+ + R +V+A+   H  G++HRDLKPEN
Sbjct: 77  DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPEN 136

Query: 147 FIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAG 205
            +FT +++N  +K  DFG A     + +  +    T  Y APELL    Y +  D+WS G
Sbjct: 137 LLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLG 196

Query: 206 LILYNLLSGAQPFWAE-------SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
           +ILY +LSG  PF +        S    +  I   +  F+ + W  +S  AKDLI+ +L 
Sbjct: 197 VILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLT 256

Query: 259 RDPNNQITVAQILKHPWLNYENGEAWDRPI---------DTAIISRVK-QFRAMSKLKKL 308
            DPN ++ ++ +  + WL  +  +    P+           A+ + VK  F A +K K+ 
Sbjct: 257 VDPNKRLKMSGLRYNEWLQ-DGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFNKYKRE 315

Query: 309 ALKV 312
              +
Sbjct: 316 GFCL 319

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  326 bits (838), Expect = e-110
 Identities = 90/278 (32%), Positives = 133/278 (47%), Gaps = 32/278 (11%)

Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE---- 96
           G    DI  ++T+   + RG  G + +  +  T ++ A K I K    D    K+E    
Sbjct: 1   GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM 60

Query: 97  ----H----------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALH 130
               H                      C GG L +R+  +  + E  AA + + V++A+ 
Sbjct: 61  KSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVA 120

Query: 131 ACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL 190
            CH   + HRDLKPENF+F TD  ++ LK  DFGLA  F+ GK+    VGTP Y++P++L
Sbjct: 121 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL 180

Query: 191 GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK 250
               YG E D WSAG+++Y LL G  PF A +    +  I      F    W  +S  A+
Sbjct: 181 EG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAE 239

Query: 251 DLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPI 288
            LIRR+L + P  +IT  Q L+H W   +   +  R +
Sbjct: 240 SLIRRLLTKSPKQRITSLQALEHEWFE-KQLSSSPRNL 276

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  334 bits (858), Expect = e-109
 Identities = 99/388 (25%), Positives = 154/388 (39%), Gaps = 37/388 (9%)

Query: 6   SKSQDSDSAAQQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRI 65
              +       +   +     +V+D         +   ++ +  H+ I EEL  G  G +
Sbjct: 114 DVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVV 173

Query: 66  YLCTENSTGLQFACKSISKTSKSDEGYLKRE--------H-------------------- 97
           +  TE +TG  FA K +    +SD+  +++E        H                    
Sbjct: 174 HRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233

Query: 98  --CDGGTLVDRI-SDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
               GG L +++  +  + +E  A    R V   L   H N  +H DLKPEN +FTT   
Sbjct: 234 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRS 293

Query: 155 NATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
           N  LK  DFGL    +  +  +   GT  + APE+      G   D+WS G++ Y LLSG
Sbjct: 294 NE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352

Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHP 274
             PF  E+   TL  + S + +     +  IS   KD IR++L+ DPN ++T+ Q L+HP
Sbjct: 353 LSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP 412

Query: 275 WLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDT 334
           WL   N    D  I +   SR  + R   K K  A    +   P   I  +    K    
Sbjct: 413 WLTPGNAPGRDSQIPS---SRYTKIRDSIKTKYDAWPEPL--PPLGRISNYSSLRKHRPQ 467

Query: 335 NDSGTLTYDEFKAGLSKLGSTLTEVDVK 362
             S    + +      +        +V 
Sbjct: 468 EYSIRDAFWDRSEAQPRFIVKPYGTEVG 495

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  325 bits (835), Expect = e-109
 Identities = 86/308 (27%), Positives = 144/308 (46%), Gaps = 39/308 (12%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK------TSKSDEGYLKRE-- 96
           + ++  + I EEL  G+   +  C E STGL++A K I K              ++RE  
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 97  ------H----------------------CDGGTLVDRISDRERYTERAAASVFRSVVNA 128
                 H                        GG L D ++ +E  +E  A S  + +++ 
Sbjct: 68  ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127

Query: 129 LHACHSNGIMHRDLKPENFIFTT-DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
           ++  H+  I H DLKPEN +    +     +K  DFGLA   E+G  ++ + GTP ++AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187

Query: 188 ELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS 247
           E++     G E D+WS G+I Y LLSGA PF  ++   TL  I S   DF  + +   S 
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSE 247

Query: 248 SAKDLIRRMLIRDPNNQITVAQILKHPWL-NYENGEAWDRPIDTAIISRVKQFRAMSKLK 306
            AKD IR++L+++   ++T+ + L+HPW+   +N +A  R      +   ++     + K
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWK 307

Query: 307 KLALKVIV 314
             +  ++ 
Sbjct: 308 L-SFSIVS 314

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  317 bits (816), Expect = e-106
 Identities = 89/264 (33%), Positives = 129/264 (48%), Gaps = 32/264 (12%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--SKSDEGYLKRE------ 96
                ++ + EEL +G    +  C   +TGL+FA K I+    S  D   L+RE      
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61

Query: 97  --H----------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHAC 132
             H                        GG L + I  RE Y+E  A+   + ++ ++  C
Sbjct: 62  LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           HSNGI+HR+LKPEN +  +  + A +K  DFGLA    + + +    GTP Y++PE+L  
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 181

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
             Y K +DIW+ G+ILY LL G  PFW E  +     I +   D+ S  W T++  AK L
Sbjct: 182 DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 241

Query: 253 IRRMLIRDPNNQITVAQILKHPWL 276
           I  ML  +P  +IT  Q LK PW+
Sbjct: 242 IDSMLTVNPKKRITADQALKVPWI 265

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  318 bits (817), Expect = e-106
 Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 48/320 (15%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK--------TSKSDEGYLKRE 96
           + ++  + +++ L  G  G + L  E  T  + A K ISK                ++ E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65

Query: 97  --------H---------------------CDGGTLVDRISDRERYTERAAASVFRSVVN 127
                   H                      +GG L D++   +R  E      F  ++ 
Sbjct: 66  IEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
           A+   H NGI+HRDLKPEN + ++ +E+  +K TDFG +    E  +   + GTP Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185

Query: 188 ELLGPC---KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTL-TAIMSREIDFKSDPWP 243
           E+L       Y + +D WS G+IL+  LSG  PF       +L   I S + +F  + W 
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245

Query: 244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMS 303
            +S  A DL++++L+ DP  + T  + L+HPWL        D  +       + +    +
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ-------DEDMKRKFQDLLSEENEST 298

Query: 304 KLKKLALKVIVENLPAEEIQ 323
            L ++  +         E +
Sbjct: 299 ALPQVLAQPSTSRKRPREGE 318

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  315 bits (809), Expect = e-105
 Identities = 86/264 (32%), Positives = 132/264 (50%), Gaps = 33/264 (12%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--SKSDEGYLKRE------ 96
                 + I   L +G  G +  C +  T  ++A K I+K      D   + RE      
Sbjct: 18  GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77

Query: 97  --H----------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHAC 132
             H                        GG L D I  R+R++E  AA + + V + +   
Sbjct: 78  LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           H + I+HRDLKPEN +  + +++  +K  DFGL+  F++    ++ +GT  Y+APE+L  
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR- 196

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
             Y ++ D+WSAG+ILY LLSG  PF+ ++ Y  L  + + +  F    W TIS  AKDL
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256

Query: 253 IRRMLIRDPNNQITVAQILKHPWL 276
           IR+ML   P+ +IT  Q L+HPW+
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWI 280

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  315 bits (810), Expect = e-105
 Identities = 89/316 (28%), Positives = 153/316 (48%), Gaps = 41/316 (12%)

Query: 45  EDIKLHFTIAEE-LCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------- 88
             +   + ++++ L  G +G++  C    TG + A K +  + K+               
Sbjct: 24  YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPH 83

Query: 89  ---------DEGYLKR------EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHA 131
                    +  + KR      E  +GG L  RI +R  + +TER AA + R +  A+  
Sbjct: 84  IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF 143

Query: 132 CHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLG 191
            HS+ I HRD+KPEN ++T+ +++A LK TDFG A    +  +      TP Y+APE+LG
Sbjct: 144 LHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ-TPCYTPYYVAPEVLG 202

Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR----EIDFKSDPWPTISS 247
           P KY K  D+WS G+I+Y LL G  PF++ +       +  R    +  F +  W  +S 
Sbjct: 203 PEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSE 262

Query: 248 SAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKK 307
            AK LIR +L  DP  ++T+ Q + HPW+N ++      P+ TA + + +      ++K+
Sbjct: 263 DAKQLIRLLLKTDPTERLTITQFMNHPWIN-QSMVVPQTPLHTARVLQ-EDKDHWDEVKE 320

Query: 308 LALKVI-VENLPAEEI 322
                +    +  +++
Sbjct: 321 EMTSALATMRVDYDQV 336

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  311 bits (800), Expect = e-104
 Identities = 88/283 (31%), Positives = 134/283 (47%), Gaps = 38/283 (13%)

Query: 46  DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT------SKSDEGYLKRE--- 96
            ++ H+ + EEL  G+   +  C +  TG ++A K I K              ++RE   
Sbjct: 2   MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61

Query: 97  -----H----------------------CDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
                H                        GG L D ++++E  TE  A    + +++ +
Sbjct: 62  LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121

Query: 130 HACHSNGIMHRDLKPENFIFTT-DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE 188
           H  HS  I H DLKPEN +    +  N  +K  DFG+A   E G  ++ + GTP ++APE
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS 248
           ++     G E D+WS G+I Y LLSGA PF  E+   TLT I +   DF  + +   S  
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241

Query: 249 AKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTA 291
           AKD IRR+L++DP  ++T+AQ L+H W+         R  D+ 
Sbjct: 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIK-AIRRRNVRGEDSG 283

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  315 bits (809), Expect = e-104
 Identities = 84/374 (22%), Positives = 147/374 (39%), Gaps = 59/374 (15%)

Query: 7   KSQDSDSAAQQQQQTPQLHVHVYDDDDDDDD-----TILGKAYEDIKLHFTIAEELCRGE 61
                   ++ + +     ++ YD   +D         +      +  ++ I EEL  G 
Sbjct: 4   SHHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGA 63

Query: 62  SGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE--------H---------------- 97
            G ++ C E +TG  F  K I+     D+  +K E        H                
Sbjct: 64  FGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEM 123

Query: 98  ------CDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
                   GG L DRI+  + + +E    +  R     L   H + I+H D+KPEN +  
Sbjct: 124 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCE 183

Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYN 210
           T  + +++K  DFGLA      ++ +    T  + APE++     G   D+W+ G++ Y 
Sbjct: 184 TK-KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYV 242

Query: 211 LLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQI 270
           LLSG  PF  E    TL  +   + +F  D + ++S  AKD I+ +L ++P  ++TV   
Sbjct: 243 LLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 302

Query: 271 LKHPWLNYENGEAWDRPIDTAI---------------------ISRVKQFRAMSKLKKLA 309
           L+HPWL   +       I ++                      I R+  F ++ K +   
Sbjct: 303 LEHPWLK-GDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHRPQE 361

Query: 310 LKVIVENLPAEEIQ 323
            ++       +E  
Sbjct: 362 YQIYDSYFDRKEAV 375

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  312 bits (801), Expect = e-103
 Identities = 88/316 (27%), Positives = 143/316 (45%), Gaps = 48/316 (15%)

Query: 6   SKSQDSDSAAQQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRI 65
           S +  +++      Q        +     +D+     A ++    +   + + RG S  +
Sbjct: 51  SANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVV 110

Query: 66  YLCTENSTGLQFACKSISKTS--------KSDEGYLKRE---------H----------- 97
             C   +TG +FA K +  T+        +      +RE         H           
Sbjct: 111 RRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170

Query: 98  -----------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPEN 146
                         G L D ++++   +E+   S+ RS++ A+   H+N I+HRDLKPEN
Sbjct: 171 SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPEN 230

Query: 147 FIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPC------KYGKEID 200
            +    D+N  ++ +DFG +   E G+   E+ GTP Y+APE+L          YGKE+D
Sbjct: 231 ILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVD 287

Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
           +W+ G+IL+ LL+G+ PFW       L  IM  +  F S  W   SS+ KDLI R+L  D
Sbjct: 288 LWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVD 347

Query: 261 PNNQITVAQILKHPWL 276
           P  ++T  Q L+HP+ 
Sbjct: 348 PEARLTAEQALQHPFF 363

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  307 bits (788), Expect = e-102
 Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 37/267 (13%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-SKSDEGYLKRE------- 96
             I   F    +L  G  G ++L  E S+GL+   K+I+K  S+     ++ E       
Sbjct: 18  GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL 77

Query: 97  -H----------------------CDGGTLVDRISDRE----RYTERAAASVFRSVVNAL 129
            H                      C+GG L++RI   +      +E   A + + ++NAL
Sbjct: 78  DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNAL 137

Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPEL 189
              HS  ++H+DLKPEN +F     ++ +K  DFGLA  F+  +      GT LYMAPE+
Sbjct: 138 AYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV 197

Query: 190 LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA 249
                   + DIWSAG+++Y LL+G  PF   SL         +E ++  +  P ++  A
Sbjct: 198 FKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQA 255

Query: 250 KDLIRRMLIRDPNNQITVAQILKHPWL 276
            DL+++ML +DP  + + AQ+L H W 
Sbjct: 256 VDLLKQMLTKDPERRPSAAQVLHHEWF 282

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  307 bits (789), Expect = e-102
 Identities = 81/299 (27%), Positives = 124/299 (41%), Gaps = 50/299 (16%)

Query: 35  DDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS-------- 86
           D       +      ++   E L RG S  +  C    T  ++A K I  T         
Sbjct: 3   DAALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEE 62

Query: 87  -KSDEGYLKRE---------H----------------------CDGGTLVDRISDRERYT 114
            +       +E         H                         G L D ++++   +
Sbjct: 63  VQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS 122

Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
           E+    + R+++  + A H   I+HRDLKPEN +    D++  +K TDFG +   + G+ 
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEK 179

Query: 175 YEEVVGTPLYMAPELLGPC------KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLT 228
             EV GTP Y+APE++          YGKE+D+WS G+I+Y LL+G+ PFW       L 
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239

Query: 229 AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRP 287
            IMS    F S  W   S + KDL+ R L+  P  + T  + L HP+   +      R 
Sbjct: 240 MIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ-QYVVEEVRH 297

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  301 bits (773), Expect = e-99
 Identities = 82/311 (26%), Positives = 127/311 (40%), Gaps = 64/311 (20%)

Query: 46  DIKLHFTIAEE-LCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE-------- 96
             +  + + E+ L  G   R+  C    T  ++A K I K        + RE        
Sbjct: 9   RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ 68

Query: 97  -H----------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACH 133
            H                        GG+++  I  R  + E  A+ V + V +AL   H
Sbjct: 69  GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH 128

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV--------VGTPLYM 185
           + GI HRDLKPEN +    ++ + +K  DF L    +       +         G+  YM
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYM 188

Query: 186 APELL-----GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGT-------------- 226
           APE++         Y K  D+WS G+ILY LLSG  PF                      
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248

Query: 227 -LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWD 285
              +I   + +F    W  IS +AKDLI ++L+RD   +++ AQ+L+HPW+    G A +
Sbjct: 249 LFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV---QGCAPE 305

Query: 286 RPIDTA-IISR 295
             + T  ++ R
Sbjct: 306 NTLPTPMVLQR 316

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  300 bits (770), Expect = 1e-98
 Identities = 87/347 (25%), Positives = 143/347 (41%), Gaps = 51/347 (14%)

Query: 6   SKSQDSDSAAQQQQQTPQLHVHVYDDDDDDDDT----------ILGKAYEDIKLHFTI-- 53
           S   ++         T ++ V          D           I+      +   +T+  
Sbjct: 34  SGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSK 93

Query: 54  AEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE--------H-------- 97
            E L  G  G+++ C E +TGL+ A K I      D+  +K E        H        
Sbjct: 94  TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153

Query: 98  --------------CDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDL 142
                          DGG L DRI D     TE       + +   +   H   I+H DL
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDL 213

Query: 143 KPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIW 202
           KPEN +    D    +K  DFGLA  ++  +  +   GTP ++APE++         D+W
Sbjct: 214 KPENILCVNRDAKQ-IKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMW 272

Query: 203 SAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPN 262
           S G+I Y LLSG  PF  ++   TL  I++   D + + +  IS  AK+ I ++LI++ +
Sbjct: 273 SVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKS 332

Query: 263 NQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLA 309
            +I+ ++ LKHPWL+       D  + + + ++ K+ R       + 
Sbjct: 333 WRISASEALKHPWLS-------DHKLHSRLSAQKKKNRGSDAQDFVT 372

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  292 bits (750), Expect = 1e-96
 Identities = 80/314 (25%), Positives = 129/314 (41%), Gaps = 59/314 (18%)

Query: 36  DDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-------- 87
              +  K    I  +   ++ L  G +G++       T  +FA K +    K        
Sbjct: 5   KSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH 64

Query: 88  ----------------------SDEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFR 123
                                      +  E  DGG L  RI DR  + +TER A+ + +
Sbjct: 65  WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 124

Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL 183
           S+  A+   HS  I HRD+KPEN ++T+   NA LK TDFG                   
Sbjct: 125 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF------------------ 166

Query: 184 YMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGT----LTAIMSREIDFKS 239
             A E  G  KY K  D+WS G+I+Y LL G  PF++           T I   + +F +
Sbjct: 167 --AKETTG-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 223

Query: 240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQF 299
             W  +S   K LIR +L  +P  ++T+ + + HPW+  ++ +    P+ T+ + +  + 
Sbjct: 224 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQTPLHTSRVLKEDKE 282

Query: 300 RAMSKLKKLALKVI 313
           R    +K+     +
Sbjct: 283 RWE-DVKEEMTSAL 295

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  294 bits (754), Expect = 2e-95
 Identities = 86/298 (28%), Positives = 135/298 (45%), Gaps = 44/298 (14%)

Query: 21  TPQLHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACK 80
             +  V V+ D   DD ++  KA  D    + +++ L  G  G + L  E  T  + A +
Sbjct: 110 LSRNKVFVFFDLTVDDQSVYPKALRD---EYIMSKTLGSGACGEVKLAFERKTCKKVAIR 166

Query: 81  SISK--------TSKSDEGYLKRE--------H---------------------CDGGTL 103
            ISK                ++ E        H                      +GG L
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGEL 226

Query: 104 VDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF 163
            D++   +R  E      F  ++ A+   H NGI+HRDLKPEN + ++ +E+  +K TDF
Sbjct: 227 FDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 286

Query: 164 GLAFFFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYNLLSGAQPFWA 220
           G +    E  +   + GTP Y+APE+L   G   Y + +D WS G+IL+  LSG  PF  
Sbjct: 287 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346

Query: 221 ESLYGTL-TAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                +L   I S + +F  + W  +S  A DL++++L+ DP  + T  + L+HPWL 
Sbjct: 347 HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  286 bits (734), Expect = 1e-93
 Identities = 78/336 (23%), Positives = 145/336 (43%), Gaps = 83/336 (24%)

Query: 24  LHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSIS 83
           +H H +     ++    G +  +++  + +   + +G  G + +  EN T    A K ++
Sbjct: 1   MHHHHHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMN 60

Query: 84  K-----TSKSDEGYLKRE--------H----------------------CDGGTLVDRIS 108
           K      +  D   +K E        H                      C GG L+D+++
Sbjct: 61  KNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN 120

Query: 109 DRER----------------------------------------YTERAAASVFRSVVNA 128
                                                         E+  +++ R + +A
Sbjct: 121 VFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180

Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-----EGKVYEEVVGTPL 183
           LH  H+ GI HRD+KPENF+F+T +++  +K  DFGL+  F      E        GTP 
Sbjct: 181 LHYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY 239

Query: 184 YMAPELLGPC--KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP 241
           ++APE+L      YG + D WSAG++L+ LL GA PF   +   T++ ++++++ F++  
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPN 299

Query: 242 WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
           +  +S  A+DL+  +L R+ + +    + L+HPW++
Sbjct: 300 YNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS 335

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  209 bits (534), Expect = 7e-63
 Identities = 68/293 (23%), Positives = 111/293 (37%), Gaps = 65/293 (22%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT------------SKSDE-- 90
           + +K      + L  G SG +     +  G   A K +               ++SD+  
Sbjct: 11  QSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHP 69

Query: 91  --------------GYLKREHCDGGTLVDRISDR-------ERYTERAAASVFRSVVNAL 129
                          Y+  E C    L D +  +       +   E    S+ R + + +
Sbjct: 70  NVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128

Query: 130 HACHSNGIMHRDLKPENFIFTTDD----------ENATLKATDFGLAFFFEEGKVYEE-- 177
              HS  I+HRDLKP+N + +T            EN  +  +DFGL    + G+      
Sbjct: 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188

Query: 178 ---VVGTPLYMAPELL-------GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGT 226
                GT  + APELL          +  + IDI+S G + Y +LS G  PF  +  Y  
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK--YSR 246

Query: 227 LTAIMSREIDF---KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
            + I+         K     ++ + A DLI +M+  DP  + T  ++L+HP  
Sbjct: 247 ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  208 bits (531), Expect = 2e-62
 Identities = 66/285 (23%), Positives = 110/285 (38%), Gaps = 46/285 (16%)

Query: 30  DDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS--- 86
           D D++    I+GK      + F   + L  G  G I            A K I       
Sbjct: 11  DGDEETSVVIVGK------ISFCPKDVLGHGAEGTIV-YRGMFDNRDVAVKRILPECFSF 63

Query: 87  ---------KSDE----------------GYLKREHCDGGTLVDRISDRE-RYTERAAAS 120
                    +SDE                 Y+  E C   TL + +  ++  +      +
Sbjct: 64  ADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPIT 122

Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA--TDFGLAFFFEEGKVYEE- 177
           + +   + L   HS  I+HRDLKP N + +  + +  +KA  +DFGL      G+     
Sbjct: 123 LLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR 182

Query: 178 ---VVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
              V GT  ++APE+L           +DI+SAG + Y ++S     + +SL      ++
Sbjct: 183 RSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILL 242

Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                    P       A++LI +M+  DP  + +   +LKHP+ 
Sbjct: 243 GACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  201 bits (512), Expect = 4e-61
 Identities = 66/286 (23%), Positives = 103/286 (36%), Gaps = 64/286 (22%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F     L +G  G++           +A K I  T +                       
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67

Query: 92  -----------------------YLKREHCDGGTLVDRISDRERYTER-AAASVFRSVVN 127
                                  +++ E+C+ GTL D I       +R     +FR ++ 
Sbjct: 68  YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE---------- 177
           AL   HS GI+HRDLKP N      DE+  +K  DFGLA          +          
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184

Query: 178 -----VVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM 231
                 +GT +Y+A E+L G   Y ++ID++S G+I + ++              L  + 
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FSTGMERVNILKKLR 242

Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
           S  I+F  D         K +IR ++  DPN +     +L   WL 
Sbjct: 243 SVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLP 288

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score =  196 bits (501), Expect = 8e-61
 Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 20/200 (10%)

Query: 269 QILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKET 328
               H              + + ++  +K F+  ++LKK+AL +I ++L   EI   +  
Sbjct: 3   HHHHHSSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNI 62

Query: 329 FKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT---------TLNL 379
           F  +D ++SGTL+  E   GL K+G      D+ Q ++  D + +G          T++ 
Sbjct: 63  FIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDK 122

Query: 380 SLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGD---DATIKEIMF 436
                K+  L  F  F    N          I+ +EL+  F   ++ +   D  I  ++ 
Sbjct: 123 QTYLKKEVCLIPFKFFDIDGN--------GKISVEELKRIFGRDDIENPLIDKAIDSLLQ 174

Query: 437 EVDRDKDGRISYEEFCATMK 456
           EVD + DG I + EF   M 
Sbjct: 175 EVDLNGDGEIDFHEFMLMMS 194

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  200 bits (510), Expect = 1e-60
 Identities = 61/301 (20%), Positives = 114/301 (37%), Gaps = 55/301 (18%)

Query: 25  HVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK 84
           H H     D   + +  ++       ++I +++  G S +++    N     +A K ++ 
Sbjct: 4   HHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNL 62

Query: 85  TSKSDEGY--LKRE--------H-----------------------CDGGTLVDRISDRE 111
               ++     + E                                C    L   +  ++
Sbjct: 63  EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK 122

Query: 112 RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE 171
                   S +++++ A+H  H +GI+H DLKP NF+      +  LK  DFG+A   + 
Sbjct: 123 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQP 178

Query: 172 GKVY---EEVVGTPLYMAPELL-----------GPCKYGKEIDIWSAGLILYNLLSGAQP 217
                  +  VGT  YM PE +              K   + D+WS G ILY +  G  P
Sbjct: 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238

Query: 218 FWA-ESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           F    +    L AI+    + +           +D+++  L RDP  +I++ ++L HP++
Sbjct: 239 FQQIINQISKLHAIIDPNHEIEF--PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296

Query: 277 N 277
            
Sbjct: 297 Q 297

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  199 bits (509), Expect = 2e-60
 Identities = 58/300 (19%), Positives = 99/300 (33%), Gaps = 70/300 (23%)

Query: 47  IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS-KSDEGYLKRE--------H 97
               + +++ L +G +  ++      TG  FA K  +  S         RE        H
Sbjct: 7   SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66

Query: 98  ------------------------CDGGTLVDRISDRER---YTERAAASVFRSVVNALH 130
                                   C  G+L   + +        E     V R VV  ++
Sbjct: 67  KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126

Query: 131 ACHSNGIMHRDLKPENF-IFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPEL 189
               NGI+HR++KP N      +D  +  K TDFG A   E+ + +  + GT  Y+ P++
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186

Query: 190 LGPC--------KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR-------- 233
                       KYG  +D+WS G+  Y+  +G+ PF           +M +        
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSG 246

Query: 234 -----------EIDFKSD--PWPTISSSAKD----LIRRMLIRDPNNQITVAQILKHPWL 276
                       ID+  D     ++S   +     ++  +L  D        Q       
Sbjct: 247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  199 bits (509), Expect = 4e-60
 Identities = 64/332 (19%), Positives = 123/332 (37%), Gaps = 61/332 (18%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGY--LKRE--------H-- 97
            ++I +++  G S +++    N     +A K ++     ++     + E           
Sbjct: 10  IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 98  ---------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                                C    L   +  ++        S +++++ A+H  H +G
Sbjct: 69  DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 128

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPELL--- 190
           I+H DLKP NF+      +  LK  DFG+A   +      V +  VGT  YM PE +   
Sbjct: 129 IVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184

Query: 191 --------GPCKYGKEIDIWSAGLILYNLLSGAQPFWA-ESLYGTLTAIMSREIDFKSDP 241
                      K   + D+WS G ILY +  G  PF    +    L AI+    + +   
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-- 242

Query: 242 WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN-----YENGEAWDRPIDTAIISRV 296
                   +D+++  L RDP  +I++ ++L HP++                    ++ ++
Sbjct: 243 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQL 302

Query: 297 KQFRAMSKLKKLALKVIVENLPAEEIQKHKET 328
               + + + K A K + E+    E      +
Sbjct: 303 VGLNSPNSILK-AAKTLYEHYSGGESHNSSSS 333

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  197 bits (503), Expect = 1e-58
 Identities = 62/337 (18%), Positives = 123/337 (36%), Gaps = 62/337 (18%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGY--LKRE--------H-- 97
            ++I +++  G S +++    N     +A K ++     ++     + E           
Sbjct: 57  IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115

Query: 98  ---------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                                C    L   +  ++        S +++++ A+H  H +G
Sbjct: 116 DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPELL--- 190
           I+H DLKP NF+      +  LK  DFG+A   +      V +  VG   YM PE +   
Sbjct: 176 IVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231

Query: 191 --------GPCKYGKEIDIWSAGLILYNLLSGAQPFWA-ESLYGTLTAIMSREIDFKSDP 241
                      K   + D+WS G ILY +  G  PF    +    L AI+    + + + 
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP--NHEIEF 289

Query: 242 WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN-----YENGEAWDRPIDTAIISRV 296
                   +D+++  L RDP  +I++ ++L HP++                    ++ ++
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQL 349

Query: 297 KQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMD 333
               + + + K A  +       E    +  + K  +
Sbjct: 350 VGLNSPNSILKAAKTLYEHYSGGE--SHNSSSSKTFE 384

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  191 bits (487), Expect = 5e-57
 Identities = 66/262 (25%), Positives = 107/262 (40%), Gaps = 41/262 (15%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
            +     L +G   + +  ++  T   FA K + K+                        
Sbjct: 42  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 101

Query: 92  ---------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                          ++  E C   +L++    R+  TE  A    R +V      H N 
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 161

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV-GTPLYMAPELLGPCKY 195
           ++HRDLK  N      +E+  +K  DFGLA   E     ++V+ GTP Y+APE+L    +
Sbjct: 162 VIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 218

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR 255
             E+D+WS G I+Y LL G  PF    L  T   I  ++ ++       I+  A  LI++
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIPKH--INPVAASLIQK 274

Query: 256 MLIRDPNNQITVAQILKHPWLN 277
           ML  DP  + T+ ++L   +  
Sbjct: 275 MLQTDPTARPTINELLNDEFFT 296

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  189 bits (483), Expect = 2e-56
 Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 40/261 (15%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--SKSDEGYLKRE----------- 96
           ++ + + + +G   ++ L     TG + A K I KT  + +    L RE           
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75

Query: 97  -------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                              +  GG + D +    R  E+ A S FR +V+A+  CH   I
Sbjct: 76  IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 135

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-G 196
           +HRDLK EN +    D +  +K  DFG +  F  G   +   G P Y APEL    KY G
Sbjct: 136 VHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDG 192

Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM 256
            E+D+WS G+ILY L+SG+ PF  ++L      ++  +  ++   +  +S+  ++L++R 
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFY--MSTDCENLLKRF 248

Query: 257 LIRDPNNQITVAQILKHPWLN 277
           L+ +P  + T+ QI+K  W+N
Sbjct: 249 LVLNPIKRGTLEQIMKDRWIN 269

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  190 bits (485), Expect = 2e-56
 Identities = 30/189 (15%), Positives = 58/189 (30%), Gaps = 25/189 (13%)

Query: 100 GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLK 159
           G  L+   S  +     A   +   V+  L + H  G++H  L+P + +    D+   + 
Sbjct: 190 GEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL---DQRGGVF 246

Query: 160 ATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP-----------CKYGKEIDIWSAGLIL 208
            T F                 +  +  PEL                     D W+ GL++
Sbjct: 247 LTGFEHLVRDGA---RVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303

Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVA 268
           Y +     P   ++  G    I     +        I    + L+   L     +++   
Sbjct: 304 YWIWCADLPITKDAALGGSEWIFRSCKN--------IPQPVRALLEGFLRYPKEDRLLPL 355

Query: 269 QILKHPWLN 277
           Q ++ P   
Sbjct: 356 QAMETPEYE 364

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  188 bits (479), Expect = 3e-56
 Identities = 66/262 (25%), Positives = 107/262 (40%), Gaps = 41/262 (15%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
            +     L +G   + +  ++  T   FA K + K+                        
Sbjct: 16  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 75

Query: 92  ---------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                          ++  E C   +L++    R+  TE  A    R +V      H N 
Sbjct: 76  HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 135

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV-GTPLYMAPELLGPCKY 195
           ++HRDLK  N      +E+  +K  DFGLA   E     ++V+ GTP Y+APE+L    +
Sbjct: 136 VIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 192

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR 255
             E+D+WS G I+Y LL G  PF    L  T   I  ++ ++       I+  A  LI++
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIPKH--INPVAASLIQK 248

Query: 256 MLIRDPNNQITVAQILKHPWLN 277
           ML  DP  + T+ ++L   +  
Sbjct: 249 MLQTDPTARPTINELLNDEFFT 270

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  187 bits (478), Expect = 5e-56
 Identities = 66/279 (23%), Positives = 105/279 (37%), Gaps = 55/279 (19%)

Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT------SKSDEGYLK 94
           GK  E  +  + +   L +G  G ++     +  LQ A K I +         SD     
Sbjct: 23  GKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCP 82

Query: 95  RE-----------------------------------HCDGGTLVDRISDRERYTERAAA 119
            E                                         L D I+++    E  + 
Sbjct: 83  LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSR 142

Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV 179
             F  VV A+  CHS G++HRD+K EN +   D      K  DFG      +   Y +  
Sbjct: 143 CFFGQVVAAIQHCHSRGVVHRDIKDENILI--DLRRGCAKLIDFGSGALLHDEP-YTDFD 199

Query: 180 GTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK 238
           GT +Y  PE +   +Y      +WS G++LY+++ G  PF  +        I+  E+ F 
Sbjct: 200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFP 253

Query: 239 SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                 +S     LIRR L   P+++ ++ +IL  PW+ 
Sbjct: 254 ----AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ 288

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  188 bits (479), Expect = 8e-56
 Identities = 64/268 (23%), Positives = 101/268 (37%), Gaps = 53/268 (19%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT--------SKSDEGYLKRE----- 96
            ++    L  G  G ++   +     +   K I K              G +  E     
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 97  --------------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALH 130
                                     H  G  L   I    R  E  A+ +FR +V+A+ 
Sbjct: 85  RVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144

Query: 131 ACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL 190
                 I+HRD+K EN +     E+ T+K  DFG A + E GK++    GT  Y APE+L
Sbjct: 145 YLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVL 201

Query: 191 GPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA 249
               Y G E+++WS G+ LY L+    PF        L   +   I     P+  +S   
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENPF------CELEETVEAAIHP---PYL-VSKEL 251

Query: 250 KDLIRRMLIRDPNNQITVAQILKHPWLN 277
             L+  +L   P  + T+ +++  PW+ 
Sbjct: 252 MSLVSGLLQPVPERRTTLEKLVTDPWVT 279

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  185 bits (473), Expect = 1e-55
 Identities = 69/264 (26%), Positives = 108/264 (40%), Gaps = 41/264 (15%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGY-LKRE------------ 96
            + + + L  G  G + L     T    A K +      D    +K+E            
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67

Query: 97  ------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIM 138
                             +C GG L DRI       E  A   F  ++  +   H  GI 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127

Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE---VVGTPLYMAPELLGPCKY 195
           HRD+KPEN +    DE   LK +DFGLA  F           + GT  Y+APELL   ++
Sbjct: 128 HRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184

Query: 196 -GKEIDIWSAGLILYNLLSGAQPF-WAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI 253
             + +D+WS G++L  +L+G  P+          +    ++     +PW  I S+   L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK--TYLNPWKKIDSAPLALL 242

Query: 254 RRMLIRDPNNQITVAQILKHPWLN 277
            ++L+ +P+ +IT+  I K  W N
Sbjct: 243 HKILVENPSARITIPDIKKDRWYN 266

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  184 bits (470), Expect = 3e-55
 Identities = 75/262 (28%), Positives = 114/262 (43%), Gaps = 41/262 (15%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT---SKSDEGYLKRE---------- 96
           H+ + + L  G  G++ +     TG + A K +++    S    G +KRE          
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71

Query: 97  --------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                               +  GG L D I    R  E  A  +F+ +++A+  CH + 
Sbjct: 72  HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY- 195
           ++HRDLKPEN +    D +   K  DFGL+    +G+      G+P Y APE++    Y 
Sbjct: 132 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 188

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR 255
           G E+DIWS G+ILY LL G  PF  E +      I      F    +  ++ S   L+  
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV--FYIPEY--LNRSVATLLMH 244

Query: 256 MLIRDPNNQITVAQILKHPWLN 277
           ML  DP  + T+  I +H W  
Sbjct: 245 MLQVDPLKRATIKDIREHEWFK 266

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  188 bits (479), Expect = 3e-55
 Identities = 55/299 (18%), Positives = 96/299 (32%), Gaps = 70/299 (23%)

Query: 47  IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS-KSDEGYLKRE--------H 97
               + +++ L +G +  ++      TG  FA K  +  S         RE        H
Sbjct: 7   SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66

Query: 98  ------------------------CDGGTLVDRISDRER---YTERAAASVFRSVVNALH 130
                                   C  G+L   + +        E     V R VV  ++
Sbjct: 67  KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126

Query: 131 ACHSNGIMHRDLKPENF-IFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPEL 189
               NGI+HR++KP N      +D  +  K TDFG A   E+ + +  + GT  Y+ P++
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186

Query: 190 LGPC--------KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR-------- 233
                       KYG  +D+WS G+  Y+  +G+ PF           +M +        
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSG 246

Query: 234 -------------EIDFKSDPWPTISSSAKD----LIRRMLIRDPNNQITVAQILKHPW 275
                        +         ++S   +     ++  +L  D        Q      
Sbjct: 247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  186 bits (473), Expect = 4e-55
 Identities = 73/277 (26%), Positives = 115/277 (41%), Gaps = 53/277 (19%)

Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------- 91
           GK  E ++  + +   L  G  G +Y     S  L  A K + K   SD G         
Sbjct: 35  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94

Query: 92  ----YLKR-------------------------EHCDG-GTLVDRISDRERYTERAAASV 121
                LK+                         E  +    L D I++R    E  A S 
Sbjct: 95  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154

Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
           F  V+ A+  CH+ G++HRD+K EN +   D     LK  DFG     ++   Y +  GT
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-YTDFDGT 211

Query: 182 PLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
            +Y  PE +   +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+  
Sbjct: 212 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR-- 263

Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +SS  + LIR  L   P+++ T  +I  HPW+ 
Sbjct: 264 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  184 bits (470), Expect = 4e-55
 Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 42/263 (15%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
            F +   L +G    +Y      TGL+ A K I K +    G                  
Sbjct: 12  DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71

Query: 92  ---------------YLKREHCDGGTLVDRISDRERY-TERAAASVFRSVVNALHACHSN 135
                          YL  E C  G +   + +R +  +E  A      ++  +   HS+
Sbjct: 72  SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131

Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPCK 194
           GI+HRDL   N +      N  +K  DFGLA   +   + +  + GTP Y++PE+     
Sbjct: 132 GILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA 188

Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR 254
           +G E D+WS G + Y LL G  PF  +++  TL  ++  + +    P   +S  AKDLI 
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM---P-SFLSIEAKDLIH 244

Query: 255 RMLIRDPNNQITVAQILKHPWLN 277
           ++L R+P ++++++ +L HP+++
Sbjct: 245 QLLRRNPADRLSLSSVLDHPFMS 267

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  185 bits (471), Expect = 7e-55
 Identities = 69/264 (26%), Positives = 108/264 (40%), Gaps = 41/264 (15%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-EGYLKRE------------ 96
            + + + L  G  G + L     T    A K +      D    +K+E            
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67

Query: 97  ------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIM 138
                             +C GG L DRI       E  A   F  ++  +   H  GI 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127

Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE---VVGTPLYMAPELLGPCKY 195
           HRD+KPEN +    DE   LK +DFGLA  F           + GT  Y+APELL   ++
Sbjct: 128 HRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184

Query: 196 -GKEIDIWSAGLILYNLLSGAQPF-WAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI 253
             + +D+WS G++L  +L+G  P+          +    ++     +PW  I S+   L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK--TYLNPWKKIDSAPLALL 242

Query: 254 RRMLIRDPNNQITVAQILKHPWLN 277
            ++L+ +P+ +IT+  I K  W N
Sbjct: 243 HKILVENPSARITIPDIKKDRWYN 266

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  183 bits (466), Expect = 2e-54
 Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 41/258 (15%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           F I   L +G+ G +YL  E  +    A K + K      G                   
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70

Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  +
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +         LK  DFG +      +   ++ GT  Y+ PE++    + +
Sbjct: 131 IHRDIKPENLLL---GSAGELKIADFGWSVHAPSSRRT-DLCGTLDYLPPEMIEGRMHDE 186

Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+WS G++ Y  L G  PF A +   T   I   E  F   P   ++  A+DLI R+L
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF---P-DFVTEGARDLISRLL 242

Query: 258 IRDPNNQITVAQILKHPW 275
             +P+ +  + ++L+HPW
Sbjct: 243 KHNPSQRPMLREVLEHPW 260

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score =  178 bits (454), Expect = 6e-54
 Identities = 45/200 (22%), Positives = 79/200 (39%), Gaps = 24/200 (12%)

Query: 271 LKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFK 330
           + H   +  +G          ++   K +  + K +KLA+ +I +     +++K K TF 
Sbjct: 1   MHHHHHH-SSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFL 59

Query: 331 QMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT-------TLNLSLVQ 383
            +D +  G +T ++ K GL K G  L   +    +   D DG+G           L   Q
Sbjct: 60  VLDEDGKGYITKEQLKKGLEKDGLKLPY-NFDLLLDQIDSDGSGKIDYTEFIAAALDRKQ 118

Query: 384 CKDTSLKD-FNIFTKPSNILIRIMISIYITADELEAAFKEYNMG------DDATIKEIMF 436
                +   F +F   ++          IT  EL       N        D   +K ++ 
Sbjct: 119 LSKKLIYCAFRVFDVDND--------GEITTAELAHILYNGNKKGNITQRDVNRVKRMIR 170

Query: 437 EVDRDKDGRISYEEFCATMK 456
           +VD++ DG+I + EF   MK
Sbjct: 171 DVDKNNDGKIDFHEFSEMMK 190

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  183 bits (467), Expect = 7e-54
 Identities = 65/288 (22%), Positives = 114/288 (39%), Gaps = 47/288 (16%)

Query: 25  HVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISK 84
           H H     D   + +  ++ E     +   +++  G  G+  L      G Q+  K I+ 
Sbjct: 4   HHHHSSGVDLGTENLYFQSMEK----YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINI 59

Query: 85  TSKSDE---------------------GYLKR-----------EHCDGGTLVDRISDR-- 110
           +  S +                      Y +            ++C+GG L  RI+ +  
Sbjct: 60  SRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKG 119

Query: 111 ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
             + E      F  +  AL   H   I+HRD+K +N IF T D    ++  DFG+A    
Sbjct: 120 VLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQN-IFLTKDGT--VQLGDFGIARVLN 176

Query: 171 EGKVYEE-VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTA 229
                    +GTP Y++PE+     Y  + DIW+ G +LY L +    F A S+   +  
Sbjct: 177 STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLK 236

Query: 230 IMSREIDFKSDPWPT-ISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           I+S        P     S   + L+ ++  R+P ++ +V  IL+  ++
Sbjct: 237 IISGSF----PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  184 bits (467), Expect = 9e-54
 Identities = 29/194 (14%), Positives = 53/194 (27%), Gaps = 16/194 (8%)

Query: 95  REHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
               D   L   +      R      A   +   ++       S G++H    P+N    
Sbjct: 169 AASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI- 227

Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP--CKYGKEIDIWSAGLIL 208
               +  L   D      ++ G           Y   E L      +   ++ W  GL +
Sbjct: 228 --MPDGRLMLGDVSAL--WKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSI 283

Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW-----PTISSSAKDLIRRMLIRDPNN 263
           Y +     PF   +     +          +D         +    K LI R L  D   
Sbjct: 284 YRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRR 343

Query: 264 QITVAQILKHPWLN 277
           ++   + ++ P   
Sbjct: 344 RLLPLEAMETPEFL 357

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 41.6 bits (97), Expect = 4e-04
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR 95
              + E L  G+   ++L  +      FA K  +  +++    L+R
Sbjct: 63  KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELER 108

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  181 bits (461), Expect = 1e-53
 Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 10/190 (5%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E  + G +++  +  +  +E  A   F+ ++  +   H   I+HRD+KP N +   
Sbjct: 114 YMVFELVNQGPVMEVPT-LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV-- 170

Query: 152 DDENATLKATDFGLAFFFEEGKVY-EEVVGTPLYMAPELLGPCK--Y-GKEIDIWSAGLI 207
             E+  +K  DFG++  F+         VGTP +MAPE L   +  + GK +D+W+ G+ 
Sbjct: 171 -GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVT 229

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITV 267
           LY  + G  PF  E +    + I S+ ++F     P I+   KDLI RML ++P ++I V
Sbjct: 230 LYCFVFGQCPFMDERIMCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVV 287

Query: 268 AQILKHPWLN 277
            +I  HPW+ 
Sbjct: 288 PEIKLHPWVT 297

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  180 bits (458), Expect = 2e-53
 Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 41/258 (15%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKT---SKSDEGYLKRE--------H-- 97
           F I   L +G+ G +YL  E       A K + K+    +  E  L+RE        H  
Sbjct: 16  FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75

Query: 98  --------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                                  G L   +    R+ E+ +A+    + +ALH CH   +
Sbjct: 76  ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           +HRD+KPEN +         LK  DFG +      +    + GT  Y+ PE++    + +
Sbjct: 136 IHRDIKPENLLM---GYKGELKIADFGWSVHAPSLRRR-TMCGTLDYLPPEMIEGKTHDE 191

Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           ++D+W AG++ Y  L G  PF + S   T   I++ ++ F   P P +S  +KDLI ++L
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF---P-PFLSDGSKDLISKLL 247

Query: 258 IRDPNNQITVAQILKHPW 275
              P  ++ +  +++HPW
Sbjct: 248 RYHPPQRLPLKGVMEHPW 265

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  178 bits (455), Expect = 5e-53
 Identities = 69/272 (25%), Positives = 105/272 (38%), Gaps = 52/272 (19%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------- 90
            + +   +  G  GR       S G     K +   S ++                    
Sbjct: 7   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66

Query: 91  --GYLKR-------------EHCDGGTLVDRIS----DRERYTERAAASVFRSVVNALHA 131
              Y  R             E+C+GG L   I+    +R+   E     V   +  AL  
Sbjct: 67  IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126

Query: 132 CHS-----NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY-EEVVGTPLYM 185
           CH      + ++HRDLKP N +F    +N  +K  DFGLA        + +  VGTP YM
Sbjct: 127 CHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDTSFAKTFVGTPYYM 183

Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI 245
           +PE +    Y ++ DIWS G +LY L +   PF A S       I   +        P  
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF----RRIPYR 239

Query: 246 -SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
            S    ++I RML     ++ +V +IL++P +
Sbjct: 240 YSDELNEIITRMLNLKDYHRPSVEEILENPLI 271

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  181 bits (461), Expect = 6e-53
 Identities = 72/263 (27%), Positives = 110/263 (41%), Gaps = 39/263 (14%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE------------- 96
            +   +++  G  G   L  +  T    A K I + +  DE  ++RE             
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDE-NVQREIINHRSLRHPNIV 79

Query: 97  -----------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
                            +  GG L +RI +  R++E  A   F+ +++ +  CHS  I H
Sbjct: 80  RFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICH 139

Query: 140 RDLKPENFIFTTDDENAT--LKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-G 196
           RDLK EN +    D +    LK  DFG +         +  VGTP Y+APE+L   +Y G
Sbjct: 140 RDLKLENTLL---DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDG 196

Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR--EIDFKSDPWPTISSSAKDLIR 254
           K  D+WS G+ LY +L GA PF            + R   + +       IS     LI 
Sbjct: 197 KIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLIS 256

Query: 255 RMLIRDPNNQITVAQILKHPWLN 277
           R+ + DP  +I++ +I  H W  
Sbjct: 257 RIFVADPATRISIPEIKTHSWFL 279

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  187 bits (475), Expect = 2e-52
 Identities = 59/289 (20%), Positives = 99/289 (34%), Gaps = 60/289 (20%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISK------------------------- 84
            + + E L  G  G +       TG Q A K   +                         
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74

Query: 85  ------------TSKSDEGYLKREHCDGGTLVDRISDRER---YTERAAASVFRSVVNAL 129
                        + +D   L  E+C+GG L   ++  E      E    ++   + +AL
Sbjct: 75  VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134

Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPEL 189
              H N I+HRDLKPEN +     +    K  D G A   ++G++  E VGT  Y+APEL
Sbjct: 135 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 194

Query: 190 LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS- 248
           L   KY   +D WS G + +  ++G +PF            +  + +     +  ++ + 
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAV 254

Query: 249 -------------------AKDLIRRMLIRDPNNQITVAQILKHPWLNY 278
                               +  ++ ML+     + T  Q         
Sbjct: 255 KFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA 303

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  183 bits (466), Expect = 2e-52
 Identities = 92/431 (21%), Positives = 160/431 (37%), Gaps = 68/431 (15%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT---SKSDEGYLKRE---------- 96
           H+ + + L  G  G++ +     TG + A K +++    S    G ++RE          
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76

Query: 97  --------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                               +  GG L D I    R  E+ +  +F+ +++ +  CH + 
Sbjct: 77  HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY- 195
           ++HRDLKPEN +    D +   K  DFGL+    +G+      G+P Y APE++    Y 
Sbjct: 137 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 193

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR 255
           G E+DIWS+G+ILY LL G  PF  + +      I      F +  +  ++ S   L++ 
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI--FYTPQY--LNPSVISLLKH 249

Query: 256 MLIRDPNNQITVAQILKHPWLN--------YENGEAWDRPIDTAIISRVKQFRAMSKLKK 307
           ML  DP  + T+  I +H W           E+       ID   +  V +    S+ + 
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEE- 308

Query: 308 LALKVIVENLPAEEIQKHKETF--------KQMDTNDSGTLTYDEFKAGLSKLGSTLTEV 359
                ++  L     Q              + M+      L      + L     T    
Sbjct: 309 -----VLSCLYNRNHQDPLAVAYHLIIDNRRIMNEAKDFYLATSPPDSFLDDHHLTRPHP 363

Query: 360 DVKQYMQAADIDGNGTTLNLSLVQCKDTSLK-DFNIFTKPSNILIR-IMISIYITADELE 417
           +   ++ A       T   L+  + K   ++         S      IM  +     +L+
Sbjct: 364 ERVPFLVAETPRARHTLDELNPQKSKHQGVRKAKWHLGIRSQSRPNDIMAEVCRAIKQLD 423

Query: 418 AAFK---EYNM 425
             +K    Y +
Sbjct: 424 YEWKVVNPYYL 434

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  179 bits (455), Expect = 3e-52
 Identities = 84/289 (29%), Positives = 131/289 (45%), Gaps = 47/289 (16%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT---SKSDEGYLKRE--------H- 97
            + I E L  G  G++ L T   T  + A K IS+           ++RE        H 
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69

Query: 98  --------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                                 GG L D I +++R TE      F+ ++ A+  CH + I
Sbjct: 70  HIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-G 196
           +HRDLKPEN +    D+N  +K  DFGL+    +G   +   G+P Y APE++    Y G
Sbjct: 130 VHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAG 186

Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM 256
            E+D+WS G++LY +L G  PF  E +      + S    +    +  +S  A+ LIRRM
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV--YVMPDF--LSPGAQSLIRRM 242

Query: 257 LIRDPNNQITVAQILKHPWLN-------YENGEAWDRPIDTAIISRVKQ 298
           ++ DP  +IT+ +I + PW N           E      D+ I+S++ +
Sbjct: 243 IVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGE 291

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score =  171 bits (435), Expect = 2e-51
 Identities = 72/172 (41%), Positives = 104/172 (60%), Gaps = 18/172 (10%)

Query: 297 KQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTL 356
           KQF AM+K KK+AL+VI E+L  EEI   KE F  +D + SG +T++E KAGL ++G+ L
Sbjct: 1   KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANL 60

Query: 357 TEVDVKQYMQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMI 407
            E ++   MQAAD+D +GT         TL+L+ ++ +D     F  F K  +       
Sbjct: 61  KESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGS------- 113

Query: 408 SIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
             YIT DEL+ A +E+ + D   I+E+M +VD+D DGRI Y EF A M+ G+
Sbjct: 114 -GYITPDELQQACEEFGVEDV-RIEELMRDVDQDNDGRIDYNEFVAMMQKGS 163

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  175 bits (445), Expect = 3e-51
 Identities = 63/293 (21%), Positives = 115/293 (39%), Gaps = 51/293 (17%)

Query: 59  RGESGRIYLCTENSTGLQFACKSISKTS----KSDEGYLKRE------------------ 96
            G  G++    ++ T  + A K + K       + E  +K+E                  
Sbjct: 15  EGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDV 74

Query: 97  --------------HCDGGT--LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHR 140
                         +C  G   ++D + ++ R+    A   F  +++ L   HS GI+H+
Sbjct: 75  LYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEYLHSQGIVHK 133

Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELL-GPCKY- 195
           D+KP N +        TLK +  G+A                G+P +  PE+  G   + 
Sbjct: 134 DIKPGNLLL---TTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFS 190

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR 255
           G ++DIWSAG+ LYN+ +G  PF  +++Y     I      +             DL++ 
Sbjct: 191 GFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGS--YAIPGD--CGPPLSDLLKG 246

Query: 256 MLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKL 308
           ML  +P  + ++ QI +H W   ++  A              ++R+M+ +  L
Sbjct: 247 MLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDTKDRWRSMTVVPYL 299

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  172 bits (439), Expect = 1e-50
 Identities = 60/270 (22%), Positives = 97/270 (35%), Gaps = 55/270 (20%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------- 88
           F   E +  G  G+++       G  +  K +   ++                       
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72

Query: 89  --DEGYLKR------------------EHCDGGTLVDRISDR--ERYTERAAASVFRSVV 126
                Y                     E CD GTL   I  R  E+  +  A  +F  + 
Sbjct: 73  WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMA 186
             +   HS  +++RDLKP N IF  D +   +K  DFGL    +         GT  YM+
Sbjct: 133 KGVDYIHSKKLINRDLKPSN-IFLVDTKQ--VKIGDFGLVTSLKNDGKRTRSKGTLRYMS 189

Query: 187 PELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS 246
           PE +    YGKE+D+++ GLIL  LL       A       T +    I           
Sbjct: 190 PEQISSQDYGKEVDLYALGLILAELLHVCDT--AFETSKFFTDLRDGIIS------DIFD 241

Query: 247 SSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
              K L++++L + P ++   ++IL+   +
Sbjct: 242 KKEKTLLQKLLSKKPEDRPNTSEILRTLTV 271

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  170 bits (434), Expect = 2e-49
 Identities = 60/261 (22%), Positives = 85/261 (32%), Gaps = 44/261 (16%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
            F     L  G  G ++       G  +A K      +  +                   
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117

Query: 92  ---------------YLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSN 135
                          YL+ E C G +L            E       R  + AL   HS 
Sbjct: 118 CCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176

Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY 195
           G++H D+KP N IF         K  DFGL          E   G P YMAPELL    Y
Sbjct: 177 GLVHLDVKPAN-IFL--GPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELL-QGSY 232

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR 255
           G   D++S GL +  +    +        G     + R+     +    +SS  + ++  
Sbjct: 233 GTAADVFSLGLTILEVACNMELPH----GGEGWQQL-RQGYLPPEFTAGLSSELRSVLVM 287

Query: 256 MLIRDPNNQITVAQILKHPWL 276
           ML  DP  + T   +L  P L
Sbjct: 288 MLEPDPKLRATAEALLALPVL 308

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  171 bits (434), Expect = 3e-49
 Identities = 63/324 (19%), Positives = 114/324 (35%), Gaps = 81/324 (25%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT-----------------SKSDEGY 92
            + I   L +G+  +I LC +      +A K   K+                  KS    
Sbjct: 32  DYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89

Query: 93  LKRE--------H----------------------CDGGTLVDRI--------SDRERYT 114
            K E        +                       +  +++           +      
Sbjct: 90  FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149

Query: 115 ERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK 173
            +    + +SV+N+    H+   I HRD+KP N +    D+N  +K +DFG + +  + K
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYMVDKK 206

Query: 174 VYEEVVGTPLYMAPELLG--PCKYGKEIDIWSAGLILYNLLSGAQPFWAE-SLYGTLTAI 230
           + +   GT  +M PE         G ++DIWS G+ LY +     PF  + SL      I
Sbjct: 207 I-KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265

Query: 231 MSREIDF---------------KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
            ++ I++                +     +S+   D ++  L ++P  +IT    LKH W
Sbjct: 266 RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW 325

Query: 276 LNYENGEAWDRPIDTAIISRVKQF 299
           L  +      R     +  + K+ 
Sbjct: 326 LA-DTNIEDLREFSKELYKKRKKL 348

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  172 bits (438), Expect = 4e-49
 Identities = 32/185 (17%), Positives = 58/185 (31%), Gaps = 18/185 (9%)

Query: 100 GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLK 159
           G  L+   S  +     A   +   V+  L + H  G++H  L+P + +    D+   + 
Sbjct: 195 GEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL---DQRGGVF 251

Query: 160 ATDFGLAFFFEEGKVYE--EVVGTPLYMAPELL-----GPCKYGKEIDIWSAGLILYNLL 212
            T F          V         P   A  +L      P       D W+ GL +Y + 
Sbjct: 252 LTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311

Query: 213 SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
               P   ++  G    I     +        I    + L+   L     +++   Q ++
Sbjct: 312 CADLPNTDDAALGGSEWIFRSCKN--------IPQPVRALLEGFLRYPKEDRLLPLQAME 363

Query: 273 HPWLN 277
            P   
Sbjct: 364 TPEYE 368

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  169 bits (430), Expect = 7e-49
 Identities = 55/278 (19%), Positives = 89/278 (32%), Gaps = 57/278 (20%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE------------- 96
           H+   ++L  G    + L      G  +A K I    + D    +RE             
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89

Query: 97  ---------------------HCDGGTLVDRISDR----ERYTERAAASVFRSVVNALHA 131
                                    GTL + I          TE     +   +   L A
Sbjct: 90  RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149

Query: 132 CHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-------FFFEEGKVYEE---VVGT 181
            H+ G  HRDLKP N I   D+        D G             +    ++      T
Sbjct: 150 IHAKGYAHRDLKPTN-ILLGDEGQ--PVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206

Query: 182 PLYMAPELLGPCKY---GKEIDIWSAGLILYNLLSGAQPFWAESLYG-TLTAIMSREIDF 237
             Y APEL     +    +  D+WS G +LY ++ G  P+      G ++   +  ++  
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI 266

Query: 238 KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
                P  SS+   L+  M+  DP+ +  +  +L    
Sbjct: 267 P--QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score =  164 bits (418), Expect = 1e-48
 Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 30/195 (15%)

Query: 286 RPIDTAIISRVKQFRAMSKLKKLALKVIVENLP-AEEIQKHKETFKQMDTNDSGTLTYDE 344
           +   T  +  +K+F++  KL + A+  +   L   EE ++  + F+Q+D N  G L   E
Sbjct: 2   KHALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKE 61

Query: 345 FKAGLSK-----------LGSTLTEVDVKQYMQAADIDGNGT---------TLNLSLVQC 384
              G  K           L S+  E +V   +Q+ D D NG           ++  L+  
Sbjct: 62  LIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLS 121

Query: 385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDG 444
           ++  L  F  F    +          IT +EL   F    + D+ T  +++ E D++ DG
Sbjct: 122 RERLLAAFQQFDSDGSG--------KITNEELGRLFGVTEVDDE-TWHQVLQECDKNNDG 172

Query: 445 RISYEEFCATMKTGT 459
            + +EEF   M+   
Sbjct: 173 EVDFEEFVEMMQKIC 187

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  161 bits (409), Expect = 4e-46
 Identities = 64/286 (22%), Positives = 96/286 (33%), Gaps = 69/286 (24%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------- 90
           F   + L RG  G ++          +A K I   ++                       
Sbjct: 7   FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66

Query: 91  GYLKR-----------------------EHCDGGTLVDRISDRERYT---ERAAASVFRS 124
            Y                          + C    L D ++ R             +F  
Sbjct: 67  RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-------------FFFEE 171
           +  A+   HS G+MHRDLKP N IF T D+   +K  DFGL                   
Sbjct: 127 IAEAVEFLHSKGLMHRDLKPSN-IFFTMDDV--VKVGDFGLVTAMDQDEEEQTVLTPMPA 183

Query: 172 GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES-LYGTLTAI 230
              +   VGT LYM+PE +    Y  ++DI+S GLIL+ LL    PF  +     TLT +
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQMERVRTLTDV 240

Query: 231 MSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
             R + F              +++ ML   P  +     I+++   
Sbjct: 241 --RNLKFPPLF-TQKYPCEYVMVQDMLSPSPMERPEAINIIENAVF 283

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  159 bits (403), Expect = 5e-45
 Identities = 63/267 (23%), Positives = 97/267 (36%), Gaps = 45/267 (16%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------- 90
           +F I +++ RG+   +Y       G+  A K +      D                    
Sbjct: 33  NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92

Query: 91  ---GYLKR-----------EHCDGGTLVDRI----SDRERYTERAAASVFRSVVNALHAC 132
               Y              E  D G L   I      +    ER     F  + +AL   
Sbjct: 93  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE-VVGTPLYMAPELLG 191
           HS  +MHRD+KP N +F T      +K  D GL  FF         +VGTP YM+PE + 
Sbjct: 153 HSRRVMHRDIKPAN-VFITATGV--VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209

Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT--ISSSA 249
              Y  + DIWS G +LY + +   PF+ + +   L ++  +       P P+   S   
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLYSLCKKIEQCDYPPLPSDHYSEEL 267

Query: 250 KDLIRRMLIRDPNNQITVAQILKHPWL 276
           + L+   +  DP  +  V  +      
Sbjct: 268 RQLVNMCINPDPEKRPDVTYVYDVAKR 294

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  159 bits (403), Expect = 7e-45
 Identities = 59/300 (19%), Positives = 102/300 (34%), Gaps = 68/300 (22%)

Query: 35  DDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLK 94
           D    +G+  E  +L   +   L  G    +Y   +  +G ++A K +    +     + 
Sbjct: 14  DQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAII 73

Query: 95  RE---------------------------------------HCDGGTLVD--RISDRERY 113
           +E                                        C G  +    ++  R   
Sbjct: 74  QEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPL 133

Query: 114 TERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKATDFGLAFFF-- 169
           +      +F     A+   H     I+HRDLK EN +        T+K  DFG A     
Sbjct: 134 SCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL---SNQGTIKLCDFGSATTISH 190

Query: 170 --------EEGKVYEE---VVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYNLLSGA 215
                   +   + EE      TP+Y  PE++        G++ DIW+ G ILY L    
Sbjct: 191 YPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ 250

Query: 216 QPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
            PF   +       I++ +      P  T  +    LIR ML  +P  ++++A+++    
Sbjct: 251 HPFEDGAKL----RIVNGKYSIP--PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score =  150 bits (380), Expect = 2e-43
 Identities = 39/188 (20%), Positives = 78/188 (41%), Gaps = 29/188 (15%)

Query: 288 IDTAIISRVKQFRAMSKLKKLALKVIVENLPA--EEIQKHKETFKQMDTNDSGTLTYDEF 345
           I   +++ +K +   S ++ + + ++   L      I+   E F ++DTN +G+L++ E 
Sbjct: 2   ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61

Query: 346 KAGLSKLGSTLTEVDVKQYMQAADIDGNGT-------TLNLSLVQCKDTSLKD-FNIFTK 397
              L+ +G  + + D+ + +QA DI+  G                 + T LK  FN   K
Sbjct: 62  YTVLASVG--IKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTFLKAAFNKIDK 119

Query: 398 PSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDG--------RISYE 449
             +         YI+  ++ +   +  + D+  I      V   K G        +IS++
Sbjct: 120 DED--------GYISKSDIVSLVHDKVL-DNNDIDNFFLSVHSIKKGIPREHIINKISFQ 170

Query: 450 EFCATMKT 457
           EF   M +
Sbjct: 171 EFKDYMLS 178

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score =  154 bits (390), Expect = 4e-43
 Identities = 28/228 (12%), Positives = 71/228 (31%), Gaps = 21/228 (9%)

Query: 242 WPTISSSAKDLIRRMLIRDPN--NQITVAQILKH-PWLNYENGEAWDRPIDTAIISRVKQ 298
              I+   ++   ++   D    N+    +  +        +  A  + + + +      
Sbjct: 43  EAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASLLKDLEDD 102

Query: 299 FRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTE 358
               ++L+          L  E+    ++ F     + SG  ++ + K  L+K   T+ E
Sbjct: 103 ASGYNRLR-----PSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPE 157

Query: 359 VDVKQYMQAADIDGNGTTLN----LSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITAD 414
             +K+     + D  G  ++    +++       + DF      S        +  ++  
Sbjct: 158 GPLKKLFVMVENDTKGR-MSYITLVAVANDLAALVADFRKIDTNS--------NGTLSRK 208

Query: 415 ELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLR 462
           E    F        +    +    D D+   + + E+         LR
Sbjct: 209 EFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLR 256

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  152 bits (385), Expect = 3e-42
 Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 24/197 (12%)

Query: 96  EHCDGGTLVDRISDRERYTER---AAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD 152
           + C    L D ++ R    +R       +F  +  A+   HS G+MHRDLKP N IF T 
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSN-IFFTM 199

Query: 153 DENATLKATDFGLA-------------FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEI 199
           D+   +K  DFGL                      +   VGT LYM+PE +    Y  ++
Sbjct: 200 DDV--VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKV 257

Query: 200 DIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIR 259
           DI+S GLIL+ LL              +T + + +       +         +++ ML  
Sbjct: 258 DIFSLGLILFELLYSFST--QMERVRIITDVRNLKF---PLLFTQKYPQEHMMVQDMLSP 312

Query: 260 DPNNQITVAQILKHPWL 276
            P  +     I+++   
Sbjct: 313 SPTERPEATDIIENAIF 329

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  140 bits (356), Expect = 1e-38
 Identities = 52/282 (18%), Positives = 90/282 (31%), Gaps = 65/282 (23%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
            F   E++  GE G ++ C +   G  +A K   K                         
Sbjct: 12  EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS 71

Query: 92  --------YLKR-------EHCDGGTLVDRISDRERY----TERAAASVFRSVVNALHAC 132
                   + +        E+C+GG+L D IS+  R      E     +   V   L   
Sbjct: 72  HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131

Query: 133 HSNGIMHRDLKPENFIFTTDD-----------------ENATLKATDFGLAFFFEEGKVY 175
           HS  ++H D+KP N IF +                        K  D G        +V 
Sbjct: 132 HSMSLVHMDIKPSN-IFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV- 189

Query: 176 EEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE 234
               G   ++A E+L     +  + DI++  L +               +  +     R+
Sbjct: 190 --EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEI-----RQ 242

Query: 235 IDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                 P   +S    +L++ M+  DP  + +   ++KH  L
Sbjct: 243 GRLPRIP-QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 283

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score =  137 bits (348), Expect = 1e-38
 Identities = 60/168 (35%), Positives = 93/168 (55%), Gaps = 18/168 (10%)

Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           E L  EEI   KE FK +DT++SGT+T+DE K GL ++GS L E ++K  M AADID +G
Sbjct: 2   ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSG 61

Query: 375 T---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM 425
           T         T++L+ ++ ++  +  F+ F K  +         YIT DE++ A K++ +
Sbjct: 62  TIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGS--------GYITLDEIQQACKDFGL 113

Query: 426 GDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGTSYRNLSHIF 473
            D   I +++ E+D+D DG+I Y EF A M+      G   R +    
Sbjct: 114 DDI-HIDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTL 160

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 24/151 (15%), Positives = 42/151 (27%), Gaps = 39/151 (25%)

Query: 301 AMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
           A   L KL           E +      F   D + SG +T DE +      G  L ++ 
Sbjct: 71  ATVHLNKL--------EREENL---VSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIH 117

Query: 361 VKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAF 420
           +   ++  D D +G                D+  F         +M        +     
Sbjct: 118 IDDMIKEIDQDNDGQI--------------DYGEF-------AAMM-----RKRKGNGGI 151

Query: 421 KEYNMGDDATIKEIMFEVDRDKDGRISYEEF 451
               M     +++ +  VD   +  I     
Sbjct: 152 GRRTMRKTLNLRDALGLVDNGSNQVIEGYFK 182

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  140 bits (355), Expect = 1e-37
 Identities = 45/302 (14%), Positives = 88/302 (29%), Gaps = 59/302 (19%)

Query: 25  HVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCT-----ENSTGLQFAC 79
           + + ++             ++       +   L  G   ++Y  T     +     +F  
Sbjct: 41  YPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVL 100

Query: 80  KSISKTSK------------------------------SDEGYLKREHCDGGTLVDRISD 109
           K     +                                +   L  E    GTL++ I+ 
Sbjct: 101 KVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINL 160

Query: 110 RERYTERA-----AASVFRSVVNALHACHSNGIMHRDLKPENFIFTT--------DDENA 156
            +   E+        S    ++  +   H   I+H D+KP+NFI           DD +A
Sbjct: 161 YKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSA 220

Query: 157 TLKATDFGLAF---FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
            L   D G +     F +G ++     T  +   E+L    +  +ID +     +Y +L 
Sbjct: 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF 280

Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
           G                + R +    D W        +    ML     + +    +L+ 
Sbjct: 281 GTYMKVKNEGGECKPEGLFRRL-PHLDMW-------NEFFHVMLNIPDCHHLPSLDLLRQ 332

Query: 274 PW 275
             
Sbjct: 333 KL 334

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  137 bits (347), Expect = 5e-37
 Identities = 69/269 (25%), Positives = 105/269 (39%), Gaps = 53/269 (19%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS---KSDEGYLKRE--------H-- 97
           F   + L  G    + L  E +T  ++A K + K     ++   Y+ RE        H  
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91

Query: 98  --------------------CDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSN 135
                                  G L+  I     + E      F +  +V+AL   H  
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR--FYTAEIVSALEYLHGK 149

Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE---VVGTPLYMAPELLGP 192
           GI+HRDLKPEN +    +E+  ++ TDFG A               VGT  Y++PELL  
Sbjct: 150 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 206

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
               K  D+W+ G I+Y L++G  PF A + Y     I+  E DF           A+DL
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDL 262

Query: 253 IRRMLIRDP------NNQITVAQILKHPW 275
           + ++L+ D               +  HP+
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 291

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score =  134 bits (338), Expect = 6e-37
 Identities = 38/195 (19%), Positives = 69/195 (35%), Gaps = 34/195 (17%)

Query: 280 NGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGT 339
           +G     P+ + +         M KL+   L        A  IQ     F+Q+D + S +
Sbjct: 2   SGLVPRGPLGSHMD---AVDATMEKLRAQCLSRG-----ASGIQGLARFFRQLDRDGSRS 53

Query: 340 LTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT---------TLNLSLVQCKDTSLK 390
           L  DEF+ GL+KLG  L + + +   +  D +G+GT                  +     
Sbjct: 54  LDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAA 113

Query: 391 DFNIFTKPSNILIRIMISIYITADELEAAFKEYN--------MGDDATIKEIMFEVD-RD 441
            F    +  +          +T D+L   +              +D  ++  +   D  +
Sbjct: 114 AFAKLDRSGD--------GVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSE 165

Query: 442 KDGRISYEEFCATMK 456
           KDG+++  EF     
Sbjct: 166 KDGQVTLAEFQDYYS 180

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  135 bits (342), Expect = 1e-35
 Identities = 81/270 (30%), Positives = 118/270 (43%), Gaps = 53/270 (19%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKT---SKSDEG---------------- 91
           + + + + RG  G + L    ST   +A K +SK     +SD                  
Sbjct: 71  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130

Query: 92  --------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                         Y+  E+  GG LV+ +S      E+ A      VV AL A HS G 
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS-NYDVPEKWARFYTAEVVLALDAIHSMGF 189

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-----VGTPLYMAPELL-- 190
           +HRD+KP+N +    D++  LK  DFG      +      V     VGTP Y++PE+L  
Sbjct: 190 IHRDVKPDNMLL---DKSGHLKLADFGTC---MKMNKEGMVRCDTAVGTPDYISPEVLKS 243

Query: 191 --GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS 248
             G   YG+E D WS G+ LY +L G  PF+A+SL GT + IM+ +          IS  
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE 303

Query: 249 AKDLIRRMLIRDPNN---QITVAQILKHPW 275
           AK+LI    + D      +  V +I +H +
Sbjct: 304 AKNLICA-FLTDREVRLGRNGVEEIKRHLF 332

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score =  129 bits (326), Expect = 5e-35
 Identities = 24/184 (13%), Positives = 58/184 (31%), Gaps = 22/184 (11%)

Query: 286 RPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEF 345
           +PI  + +     ++    ++      ++  +P ++  +  + F  +D + SGTL  +E 
Sbjct: 14  QPIQGSWMGAACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINEL 73

Query: 346 KAGLSKLGSTLTEVDVKQYMQAADIDGNGT-------TLNLSLVQCKDTSLKDFNIFTKP 398
             G    G  L+     + M+  D D NG         +   +    +     F +  + 
Sbjct: 74  MMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFMELAYNL----FVMNARA 129

Query: 399 SNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEF---CATM 455
                    S  +   E+  A ++     +     ++  +            +   CA  
Sbjct: 130 R--------SGTLEPHEILPALQQLGFYINQRTSLLLHRLFARGMAFCDLNCWIAICAFA 181

Query: 456 KTGT 459
               
Sbjct: 182 AQTR 185

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  133 bits (336), Expect = 1e-34
 Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 20/198 (10%)

Query: 92  YLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           YL  ++  GG L+  +S  E R  E  A      +V A+ + H    +HRD+KP+N +  
Sbjct: 150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM- 208

Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEV-----VGTPLYMAPELL-----GPCKYGKEID 200
             D N  ++  DFG      +      V     VGTP Y++PE+L     G  +YG E D
Sbjct: 209 --DMNGHIRLADFGSC---LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECD 263

Query: 201 IWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRMLIR 259
            WS G+ +Y +L G  PF+AESL  T   IM+ +  F+     T +S +AKDLIRR++  
Sbjct: 264 WWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICS 323

Query: 260 DPN--NQITVAQILKHPW 275
             +   Q  +    KHP+
Sbjct: 324 REHRLGQNGIEDFKKHPF 341

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  130 bits (330), Expect = 3e-34
 Identities = 72/306 (23%), Positives = 121/306 (39%), Gaps = 56/306 (18%)

Query: 13  SAAQQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKLH-FTIAEELCRGESGRIYLCTEN 71
           +AA++  +   +   +    +D        +    +L  F   + L  G  GR+ L    
Sbjct: 4   AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63

Query: 72  STGLQFACKSISK--------------------------------TSKSDEG-YLKREHC 98
            +G  +A K + K                                + K +   Y+  E+ 
Sbjct: 64  ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123

Query: 99  DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL 158
            GG +   +    R++E  A      +V      HS  +++RDLKPEN +    D+   +
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYI 180

Query: 159 KATDFGLAFFFEEGKVYEEVV----GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG 214
           + TDFG A      K  +       GTP  +APE++    Y K +D W+ G+++Y + +G
Sbjct: 181 QVTDFGFA------KRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

Query: 215 AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP-----NNQITVAQ 269
             PF+A+        I+S ++ F S      SS  KDL+R +L  D      N +  V  
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290

Query: 270 ILKHPW 275
           I  H W
Sbjct: 291 IKNHKW 296

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  131 bits (332), Expect = 4e-34
 Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 24/201 (11%)

Query: 92  YLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           YL  E+  GG L+  +S    R     A      +V A+ + H  G +HRD+KP+N +  
Sbjct: 137 YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL- 195

Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEV-----VGTPLYMAPELL-------GPCKYGKE 198
             D    ++  DFG      + +    V     VGTP Y++PE+L       G   YG E
Sbjct: 196 --DRCGHIRLADFGSC---LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPE 250

Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT-ISSSAKDLIRRML 257
            D W+ G+  Y +  G  PF+A+S   T   I+  +           +   A+D I+R L
Sbjct: 251 CDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQR-L 309

Query: 258 IRDPNN---QITVAQILKHPW 275
           +  P     +        HP+
Sbjct: 310 LCPPETRLGRGGAGDFRTHPF 330

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  128 bits (324), Expect = 4e-33
 Identities = 59/277 (21%), Positives = 107/277 (38%), Gaps = 50/277 (18%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKT---SKSDEGYLKRE--------H- 97
           HF I   + +G  G++ +  +N T   +A K ++K     +++   + +E        H 
Sbjct: 16  HFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHP 75

Query: 98  ---------------------CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                                  GG L   +     + E         +V AL    +  
Sbjct: 76  FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQR 135

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL---GPC 193
           I+HRD+KP+N +    DE+  +  TDF +A           + GT  YMAPE+       
Sbjct: 136 IIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGA 192

Query: 194 KYGKEIDIWSAGLILYNLLSGAQPFW---AESLYGTLTAIMSREIDFKSDPWPTISSSAK 250
            Y   +D WS G+  Y LL G +P+    + S    +    +  + +        S    
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP----SAWSQEMV 248

Query: 251 DLIRRMLIRDPNNQI-TVAQILKHPWLNYENGEAWDR 286
            L++++L  +P+ +   ++ +   P++N  N   WD 
Sbjct: 249 SLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN---WDA 282

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  127 bits (320), Expect = 4e-33
 Identities = 53/314 (16%), Positives = 108/314 (34%), Gaps = 34/314 (10%)

Query: 5   LSKSQDSDSAAQQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGR 64
            S ++   S + + Q+              +    +   Y +     T    + RG  G 
Sbjct: 14  ASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGE 73

Query: 65  IYLCTENSTGLQFACKSIS-KTSKSDE-GYLKR-----------------------EHCD 99
           ++   +  TG Q A K +  +  + +E                             E  +
Sbjct: 74  VHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133

Query: 100 GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLK 159
           GG+L   I       E  A       +  L   H+  I+H D+K +N +     + +   
Sbjct: 134 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVL--LSSDGSRAA 191

Query: 160 ATDFGLAFFFEEGKVYEE------VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS 213
             DFG A   +   + +       + GT  +MAPE++       ++DIWS+  ++ ++L+
Sbjct: 192 LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 251

Query: 214 GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
           G  P+           I S     +  P P+ +      I+  L ++P ++ +  ++ + 
Sbjct: 252 GCHPWTQYFRGPLCLKIASEPPPIREIP-PSCAPLTAQAIQEGLRKEPVHRASAMELRRK 310

Query: 274 PWLNYENGEAWDRP 287
                +       P
Sbjct: 311 VGKALQEVGGLKSP 324

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score =  121 bits (306), Expect = 2e-32
 Identities = 35/173 (20%), Positives = 56/173 (32%), Gaps = 23/173 (13%)

Query: 306 KKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAG-----LSKLGSTLTEVD 360
            K A+K+  +      I++HK  F  +D N +G +T DE  +       +KL +T  +  
Sbjct: 3   SKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK 62

Query: 361 VKQYMQAADIDGNGTTLNLS------LVQCKDTSLKDFNIFTKPSNILIRIMISI----- 409
             Q    A   G G            L   K  +  +   + +    LIR          
Sbjct: 63  RHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIF 122

Query: 410 ------YITADELEAAFKEYNMGD-DATIKEIMFEVDRDKDGRISYEEFCATM 455
                  IT DE +A  K   +       +      D D  G +  +E     
Sbjct: 123 DKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQH 175

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 20/75 (26%), Positives = 31/75 (41%)

Query: 301 AMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
              +L    LK    N P    +     F   D + SGT+T DE+KA     G + ++ D
Sbjct: 91  GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQED 150

Query: 361 VKQYMQAADIDGNGT 375
            +   +  D+D  G 
Sbjct: 151 CEATFRHCDLDNAGD 165

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  123 bits (310), Expect = 9e-32
 Identities = 77/271 (28%), Positives = 114/271 (42%), Gaps = 63/271 (23%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKT------------------------- 85
           F I   L  G  GR++L      G  +A K + K                          
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67

Query: 86  ------SKSDEG--YLKREHCDGGTLVDRISDRERYTE-RA---AASVFRSVVNALHACH 133
                 +  D    ++  ++ +GG L   +   +R+    A   AA V      AL   H
Sbjct: 68  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV----CLALEYLH 123

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV----GTPLYMAPEL 189
           S  I++RDLKPEN +    D+N  +K TDFG A      K   +V     GTP Y+APE+
Sbjct: 124 SKDIIYRDLKPENILL---DKNGHIKITDFGFA------KYVPDVTYTLCGTPDYIAPEV 174

Query: 190 LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA 249
           +    Y K ID WS G+++Y +L+G  PF+  +   T   I++ E+ F     P  +   
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDV 230

Query: 250 KDLIRRMLIRDP-----NNQITVAQILKHPW 275
           KDL+ R++ RD      N Q     +  HPW
Sbjct: 231 KDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  121 bits (306), Expect = 3e-31
 Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 36/182 (19%)

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVY-EEVVGTPLY 184
            A++ CH +  +HRD+KPEN +     +++ +K  DFG A         Y +EV  T  Y
Sbjct: 113 QAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWY 168

Query: 185 MAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFW-----AESLY------GTLTA--- 229
            +PE L+G  +YG  +D+W+ G +   LLSG  P W      + LY      G L     
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQ 227

Query: 230 -IMSREIDFK-------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
            + S    F                 +P IS  A  L++  L  DP  ++T  Q+L HP+
Sbjct: 228 QVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287

Query: 276 LN 277
             
Sbjct: 288 FE 289

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219

 Score =  118 bits (298), Expect = 3e-31
 Identities = 35/181 (19%), Positives = 66/181 (36%), Gaps = 33/181 (18%)

Query: 303 SKLKKLALKVIVENLP----AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSK-LGSTLT 357
           +K +K A + I + +P    AE  Q+  E FK+ D N++G L YDE  +G  + L     
Sbjct: 24  AKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEF 83

Query: 358 EVDVKQYMQAA---------DIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPS 399
              V+   + A          ++  G+          L L  +         F+      
Sbjct: 84  TSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASG 143

Query: 400 NILIRIMISIYITADELEAAFKEYNMGD--DATIKEIMFEVDRDKDGRISYEEFCATMKT 457
           N+         +  +E + A  +             +  E+D++  G ++++EF A    
Sbjct: 144 NM--------LVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASA 195

Query: 458 G 458
            
Sbjct: 196 V 196

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  120 bits (303), Expect = 1e-30
 Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 37/185 (20%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
           AL  CHS GIMHRD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +  P
Sbjct: 142 ALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 199

Query: 188 ELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWA-----------------ESLYGTLTA 229
           ELL   + Y   +D+WS G +L +++   +PF+                  E LY  +  
Sbjct: 200 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259

Query: 230 IMSREID-----------------FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
                                     S+    +S  A D + ++L  D  +++T  + ++
Sbjct: 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319

Query: 273 HPWLN 277
           HP+  
Sbjct: 320 HPYFY 324

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  120 bits (303), Expect = 1e-30
 Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 17/192 (8%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           YL  E+  GG L  ++     + E  A   F    +  AL   H  GI++RDLKPEN + 
Sbjct: 97  YLILEYLSGGELFMQLEREGIFMEDTA--CFYLAEISMALGHLHQKGIIYRDLKPENIML 154

Query: 150 TTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
              +    +K TDFGL      +G V     GT  YMAPE+L    + + +D WS G ++
Sbjct: 155 ---NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALM 211

Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN----- 263
           Y++L+GA PF  E+   T+  I+  +++      P ++  A+DL++++L R+  +     
Sbjct: 212 YDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAG 267

Query: 264 QITVAQILKHPW 275
                ++  HP+
Sbjct: 268 PGDAGEVQAHPF 279

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  119 bits (302), Expect = 1e-30
 Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 17/192 (8%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           YL  +   GG L  R+S    +TE      F    +  AL   HS GI++RDLKPEN + 
Sbjct: 102 YLILDFLRGGDLFTRLSKEVMFTEEDV--KFYLAELALALDHLHSLGIIYRDLKPENILL 159

Query: 150 TTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
              DE   +K TDFGL+    +  K      GT  YMAPE++    + +  D WS G+++
Sbjct: 160 ---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 216

Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN----- 263
           + +L+G  PF  +    T+T I+  ++         +S  A+ L+R +  R+P N     
Sbjct: 217 FEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQSLLRMLFKRNPANRLGAG 272

Query: 264 QITVAQILKHPW 275
              V +I +H +
Sbjct: 273 PDGVEEIKRHSF 284

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  119 bits (300), Expect = 1e-30
 Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 33/179 (18%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVY-EEVVGTPLYM 185
            L  CHS  ++HRDLKP+N +    + N  LK  +FGLA  F    + Y  EVV T  Y 
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYR 168

Query: 186 APE-LLGPCKYGKEIDIWSAGLILYNLLSGAQP-FWAESLYGTLTAI------------- 230
            P+ L G   Y   ID+WSAG I   L +  +P F    +   L  I             
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228

Query: 231 -MSREIDFKSDP-----------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
            M++  D+K  P            P ++++ +DL++ +L  +P  +I+  + L+HP+ +
Sbjct: 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  120 bits (302), Expect = 2e-30
 Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 34/179 (18%)

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYM 185
           N +  CHS+ I+HRD+KPEN +     ++  +K  DFG A      G+VY++ V T  Y 
Sbjct: 135 NGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYR 191

Query: 186 APE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFW-----AESLY------GTLTA---- 229
           APE L+G  KYGK +D+W+ G ++  +  G +P +      + LY      G L      
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMG-EPLFPGDSDIDQLYHIMMCLGNLIPRHQE 250

Query: 230 IMSREIDFKS-------------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
           + ++   F                 +P +S    DL ++ L  DP+ +   A++L H +
Sbjct: 251 LFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  119 bits (299), Expect = 3e-30
 Identities = 72/314 (22%), Positives = 126/314 (40%), Gaps = 58/314 (18%)

Query: 5   LSKSQDSDSAAQQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGR 64
           +       S      +       V   +       +     D +L      ++  G +G 
Sbjct: 1   MHHHHHHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGI 60

Query: 65  IYLCTENSTGLQFACKSISKTSKSDE-----------------------GYLKR------ 95
           + L  E  +G Q A K +    +                           YL        
Sbjct: 61  VCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVL 120

Query: 96  -EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
            E   GG L D I  + R  E   A+V  +V+ AL   H+ G++HRD+K ++ + T    
Sbjct: 121 MEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT---L 176

Query: 155 NATLKATDFGLAFFFEEGKVYEE------VVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
           +  +K +DFG        ++ ++      +VGTP +MAPE++    Y  E+DIWS G+++
Sbjct: 177 DGRVKLSDFGFC-----AQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMV 231

Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI------SSSAKDLIRRMLIRDPN 262
             ++ G  P++++S    +  +        S P P +      S   +D + RML+RDP 
Sbjct: 232 IEMVDGEPPYFSDSPVQAMKRLR------DSPP-PKLKNSHKVSPVLRDFLERMLVRDPQ 284

Query: 263 NQITVAQILKHPWL 276
            + T  ++L HP+L
Sbjct: 285 ERATAQELLDHPFL 298

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  117 bits (296), Expect = 6e-30
 Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 58/274 (21%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------- 90
            D K  +T  E++ +G SG +Y   + +TG + A + ++   +  +              
Sbjct: 16  GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75

Query: 91  ---------GYLKR-------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS 134
                     YL         E+  GG+L D +       E   A+V R  + AL   HS
Sbjct: 76  NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHS 134

Query: 135 NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE------VVGTPLYMAPE 188
           N ++HRD+K +N +      + ++K TDFG        ++  E      +VGTP +MAPE
Sbjct: 135 NQVIHRDIKSDNILLG---MDGSVKLTDFGFC-----AQITPEQSKRSTMVGTPYWMAPE 186

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI--- 245
           ++    YG ++DIWS G++   ++ G  P+  E+    L  I        +   P +   
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA------TNGT-PELQNP 239

Query: 246 ---SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
              S+  +D + R L  D   + +  ++L+H +L
Sbjct: 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFL 273

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score =  111 bits (281), Expect = 1e-29
 Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 23/142 (16%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT-------TLN 378
           +  FK++D N  G ++Y+E KA +SK  +   E  ++   ++ D DGNG           
Sbjct: 3   EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62

Query: 379 LSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKE 433
            S+     +  K      + +     +          +T +E+ + FK++ +     + E
Sbjct: 63  GSIQGQDLSDDKIGLKVLYKLMDVDGDG--------KLTKEEVTSFFKKHGIEK---VAE 111

Query: 434 IMFEVDRDKDGRISYEEFCATM 455
            + + D + DG I+ EEF    
Sbjct: 112 QVMKADANGDGYITLEEFLEFS 133

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 44.8 bits (107), Expect = 5e-06
 Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 5/50 (10%)

Query: 411 ITADELEAAFKEYNMGDDAT---IKEIMFEVDRDKDGRISYEEFCATMKT 457
           ++ +E++A               ++ I   +D D +G I   EF     +
Sbjct: 17  VSYEEVKAFVS--KKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  117 bits (296), Expect = 1e-29
 Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 19/191 (9%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           +   E+ +GG L+  I    ++    A   F +  ++  L   HS GI++RDLK +N + 
Sbjct: 94  FFVMEYLNGGDLMYHIQSCHKFDLSRA--TFYAAEIILGLQFLHSKGIVYRDLKLDNILL 151

Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVV----GTPLYMAPELLGPCKYGKEIDIWSAG 205
              D++  +K  DFG+    +E  + +       GTP Y+APE+L   KY   +D WS G
Sbjct: 152 ---DKDGHIKIADFGMC---KENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFG 205

Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI 265
           ++LY +L G  PF  +       +I      +       +   AKDL+ ++ +R+P  ++
Sbjct: 206 VLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDLLVKLFVREPEKRL 261

Query: 266 TVAQ-ILKHPW 275
            V   I +HP 
Sbjct: 262 GVRGDIRQHPL 272

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  116 bits (293), Expect = 1e-29
 Identities = 54/286 (18%), Positives = 102/286 (35%), Gaps = 44/286 (15%)

Query: 30  DDDDDDDDTILGKAYEDIKLHFT-IAEELCRGESGRIYLCTENSTGLQFACKSIS--KTS 86
              DD ++             F     E+ RG    +Y   +  T ++ A   +   K +
Sbjct: 6   QQQDDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT 65

Query: 87  KSDEGYLKRE--------H--------------------------CDGGTLVDRISDRER 112
           KS+    K E        H                             GTL   +   + 
Sbjct: 66  KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV 125

Query: 113 YTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKATDFGLAFFFE 170
              +   S  R ++  L   H+    I+HRDLK +N IF       ++K  D GLA    
Sbjct: 126 MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDN-IFI-TGPTGSVKIGDLGLATLKR 183

Query: 171 EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI 230
                  V+GTP +MAPE+    KY + +D+++ G+ +  + +   P+        +   
Sbjct: 184 ASFAKA-VIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR 241

Query: 231 MSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           ++  +   S          K++I   + ++ + + ++  +L H + 
Sbjct: 242 VTSGVKPASFD-KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  117 bits (295), Expect = 2e-29
 Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 23/195 (11%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
               E+ +GG L   +S    +TE  A   F    +V+AL   HS  +++RD+K EN + 
Sbjct: 81  CFVMEYANGGELFFHLSRERVFTEERA--RFYGAEIVSALEYLHSRDVVYRDIKLENLML 138

Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVV----GTPLYMAPELLGPCKYGKEIDIWSAG 205
              D++  +K TDFGL    +EG      +    GTP Y+APE+L    YG+ +D W  G
Sbjct: 139 ---DKDGHIKITDFGLC---KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192

Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN-- 263
           +++Y ++ G  PF+ +        I+  EI F      T+S  AK L+  +L +DP    
Sbjct: 193 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRL 248

Query: 264 ---QITVAQILKHPW 275
                   ++++H +
Sbjct: 249 GGGPSDAKEVMEHRF 263

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  116 bits (292), Expect = 2e-29
 Identities = 64/262 (24%), Positives = 96/262 (36%), Gaps = 53/262 (20%)

Query: 59  RGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE--------H------------- 97
           +G  G +Y   + S  ++ A K I +        L  E        H             
Sbjct: 32  KGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN 91

Query: 98  ---------CDGGTLVDRISDRE---RYTERAAASVFRSVVNALHACHSNGIMHRDLKPE 145
                      GG+L   +  +    +  E+      + ++  L   H N I+HRD+K +
Sbjct: 92  GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGD 151

Query: 146 NFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPE--LLGPCKYGKEIDIW 202
           N +   +  +  LK +DFG +          E   GT  YMAPE    GP  YGK  DIW
Sbjct: 152 N-VLI-NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIW 209

Query: 203 SAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK---SDPWPTI----SSSAKDLIRR 255
           S G  +  + +G  P + E   G   A M     FK       P I    S+ AK  I +
Sbjct: 210 SLGCTIIEMATGKPP-FYE--LGEPQAAM-----FKVGMFKVHPEIPESMSAEAKAFILK 261

Query: 256 MLIRDPNNQITVAQILKHPWLN 277
               DP+ +     +L   +L 
Sbjct: 262 CFEPDPDKRACANDLLVDEFLK 283

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  116 bits (294), Expect = 2e-29
 Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 32/182 (17%)

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENAT--LKATDFGLA-FFFEEGKVY-EEVVGTP 182
           N ++ CHS   +HRDLKP+N + +  D + T  LK  DFGLA  F    + +  E++ T 
Sbjct: 143 NGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TL 201

Query: 183 LYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI----------- 230
            Y  PE LLG   Y   +DIWS   I   +L     F  +S    L  I           
Sbjct: 202 WYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTT 261

Query: 231 ---MSREIDFKSD--PWP----------TISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
              ++   D+K     +            +     DL+  ML  DP  +I+    L+HP+
Sbjct: 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321

Query: 276 LN 277
            +
Sbjct: 322 FS 323

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  115 bits (291), Expect = 2e-29
 Identities = 53/178 (29%), Positives = 77/178 (43%), Gaps = 32/178 (17%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVY-EEVVGTPLYM 185
            +  CH   ++HRDLKP+N +    +    LK  DFGLA  F    + Y  E+V T  Y 
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEIV-TLWYR 167

Query: 186 APE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI-------------- 230
           AP+ L+G  KY   IDIWS G I   +++G   F   S    L  I              
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227

Query: 231 MSREIDFKSD--PW---------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
           ++    +  +   +           +  S  DL+ +ML  DPN +IT  Q L+H +  
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  116 bits (292), Expect = 3e-29
 Identities = 53/197 (26%), Positives = 79/197 (40%), Gaps = 33/197 (16%)

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVY-EEVVGTPLY 184
             L  CH   ++HRDLKP+N +    +E   LK  DFGLA       K Y  EVV T  Y
Sbjct: 111 RGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYDNEVV-TLWY 166

Query: 185 MAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS----------- 232
             P+ LLG   Y  +ID+W  G I Y + +G   F   ++   L  I             
Sbjct: 167 RPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWP 226

Query: 233 --------REIDFKSDP-------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                   +  ++            P + S   DL+ ++L  +  N+I+    +KHP+  
Sbjct: 227 GILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFL 286

Query: 278 YENGEAWDRPIDTAIIS 294
                    P  T+I +
Sbjct: 287 SLGERIHKLPDTTSIFA 303

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  116 bits (293), Expect = 4e-29
 Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 24/196 (12%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           +   E  +GG L+  I    R+ E  A   F +  +++AL   H  GI++RDLK +N + 
Sbjct: 100 FFVMEFVNGGDLMFHIQKSRRFDEARA--RFYAAEIISALMFLHDKGIIYRDLKLDNVLL 157

Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAG 205
              D     K  DFG+    +EG           GTP Y+APE+L    YG  +D W+ G
Sbjct: 158 ---DHEGHCKLADFGMC---KEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMG 211

Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN-- 263
           ++LY +L G  PF AE+      AI++ E+ +       +   A  +++  + ++P    
Sbjct: 212 VLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWLHEDATGILKSFMTKNPTMRL 267

Query: 264 ----QITVAQILKHPW 275
               Q     IL+HP+
Sbjct: 268 GSLTQGGEHAILRHPF 283

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  119 bits (301), Expect = 5e-29
 Identities = 63/280 (22%), Positives = 103/280 (36%), Gaps = 52/280 (18%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS-KSDEG----------------- 91
            F++   + RG  G +Y C +  TG  +A K + K   K  +G                 
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249

Query: 92  ------------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACH 133
                                 +  +GG L   +S    ++E         ++  L   H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE-LLGP 192
           +  +++RDLKP N +    DE+  ++ +D GLA  F + K +   VGT  YMAPE L   
Sbjct: 310 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPEVLQKG 365

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP-TISSSAKD 251
             Y    D +S G +L+ LL G  PF            + R     +   P + S   + 
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHK--TKDKHEIDRMTLTMAVELPDSFSPELRS 423

Query: 252 LIRRMLIRDPNN-----QITVAQILKHPWLNYENGEAWDR 286
           L+  +L RD N           ++ + P+    +   W  
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD---WQM 460

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  116 bits (292), Expect = 5e-29
 Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 24/199 (12%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           +L  ++ +GG L   +S RER+TE           +V AL   H  GI++RD+K EN + 
Sbjct: 135 HLILDYINGGELFTHLSQRERFTEHEVQ--IYVGEIVLALEHLHKLGIIYRDIKLENILL 192

Query: 150 TTDDENATLKATDFGLA--FFFEEGKVYEEVVGTPLYMAPELLGPCKYG--KEIDIWSAG 205
              D N  +  TDFGL+  F  +E +   +  GT  YMAP+++     G  K +D WS G
Sbjct: 193 ---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 249

Query: 206 LILYNLLSGAQPFWAESLYGTLT----AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP 261
           +++Y LL+GA PF  +    +       I+  E  +       +S+ AKDLI+R+L++DP
Sbjct: 250 VLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP----QEMSALAKDLIQRLLMKDP 305

Query: 262 NN-----QITVAQILKHPW 275
                       +I +H +
Sbjct: 306 KKRLGCGPRDADEIKEHLF 324

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  114 bits (288), Expect = 8e-29
 Identities = 72/332 (21%), Positives = 123/332 (37%), Gaps = 69/332 (20%)

Query: 17  QQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQ 76
           Q +  P+  +   D+D            +  +  F + E+L  G  G +Y      TG  
Sbjct: 6   QLRNPPRRQLKKLDEDSLT---------KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQI 56

Query: 77  FACKSIS---------------KTSKSD------EGYLKR-------EHCDGGTLVDRIS 108
            A K +                +   S         Y K        E+C  G++ D I 
Sbjct: 57  VAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR 116

Query: 109 DRERY-TERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF 167
            R +  TE   A++ +S +  L   H    +HRD+K  N +          K  DFG+A 
Sbjct: 117 LRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN---TEGHAKLADFGVA- 172

Query: 168 FFEEGKVYEE------VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE 221
               G++ +       V+GTP +MAPE++    Y    DIWS G+    +  G  P+   
Sbjct: 173 ----GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228

Query: 222 SLYGTLTAIMSREIDFKSDPWPTI------SSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
                +  I        + P PT       S +  D +++ L++ P  + T  Q+L+HP+
Sbjct: 229 HPMRAIFMIP------TNPP-PTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281

Query: 276 LNYENGEAWDRPIDTAIISRVKQFRAMSKLKK 307
           +      A    I   +I+     +   +  +
Sbjct: 282 VR----SAKGVSILRDLINEAMDVKLKRQESQ 309

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  116 bits (292), Expect = 8e-29
 Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 22/194 (11%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y   ++ +GG L   +     + E  A   F +  + +AL   HS  I++RDLKPEN + 
Sbjct: 115 YFVLDYINGGELFYHLQRERCFLEPRA--RFYAAEIASALGYLHSLNIVYRDLKPENILL 172

Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAG 205
              D    +  TDFGL    +E   +        GTP Y+APE+L    Y + +D W  G
Sbjct: 173 ---DSQGHIVLTDFGLC---KENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLG 226

Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN-- 263
            +LY +L G  PF++ +       I+++ +  K    P I++SA+ L+  +L +D     
Sbjct: 227 AVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRL 282

Query: 264 --QITVAQILKHPW 275
             +    +I  H +
Sbjct: 283 GAKDDFMEIKSHVF 296

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score =  109 bits (276), Expect = 1e-28
 Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 24/162 (14%)

Query: 314 VENLPAEEIQKHKETFKQMDTND-SGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           V  L + +++  +  F+  +T + SG ++ D+    L  LG   T+  ++Q +   D  G
Sbjct: 4   VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63

Query: 373 NGT---------TLNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEA 418
           NG                 +     ++      F ++ K  N         YI+ D +  
Sbjct: 64  NGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNG--------YISTDVMRE 115

Query: 419 AFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
              E +       +  ++ E+D D  G + +EEF   M  G 
Sbjct: 116 ILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGGD 157

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  114 bits (287), Expect = 1e-28
 Identities = 49/174 (28%), Positives = 69/174 (39%), Gaps = 26/174 (14%)

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMA 186
             L   H+N I+HRDLKPEN +        T+K  DFGLA  +        VV T  Y A
Sbjct: 131 RGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLARIYSYQMALTPVVVTLWYRA 187

Query: 187 PELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------SREI--DFK 238
           PE+L    Y   +D+WS G I   +      F   S    L  I         +      
Sbjct: 188 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 247

Query: 239 SDPW---------------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
           S P                P +  S   L+  ML  +P+ +I+  + L+H +L+
Sbjct: 248 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 301

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  114 bits (287), Expect = 1e-28
 Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 33/179 (18%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVY-EEVVGTPLYM 185
            +  CH + I+HRDLKP+N +    + +  LK  DFGLA  F    + Y  EVV T  Y 
Sbjct: 131 GVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYR 186

Query: 186 APE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS------------ 232
           AP+ L+G  KY   +DIWS G I   +++G   F   +    L  I S            
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ 246

Query: 233 -------REIDFKSDP-------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                  ++  F+           P       DL+  ML  DPN +I+    + HP+  
Sbjct: 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score =  109 bits (276), Expect = 1e-28
 Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 302 MSKLKK-LALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
           MSK +  L    +   L  E+ Q+  E F   D N+ G L Y E K  +  LG  L + +
Sbjct: 1   MSKNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE 60

Query: 361 VKQYMQAADIDGNGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIY 410
           +   +   D +G           +   +       D     F +F               
Sbjct: 61  ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHT--------GK 112

Query: 411 ITADELEAAFKEYNMGD---DATIKEIMFEVDRDKDGRISYEEFCATMKT 457
           I+   L    KE  +G+   D  ++ ++ E D D DG I+  EF A    
Sbjct: 113 ISIKNLRRVAKE--LGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  115 bits (289), Expect = 1e-28
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 23/195 (11%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y   E+ +GG L+  I    R+ E  A  VF +  +   L    S GI++RDLK +N + 
Sbjct: 97  YFVMEYVNGGDLMYHIQQVGRFKEPHA--VFYAAEIAIGLFFLQSKGIIYRDLKLDNVML 154

Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVV----GTPLYMAPELLGPCKYGKEIDIWSAG 205
              D    +K  DFG+    +E            GTP Y+APE++    YGK +D W+ G
Sbjct: 155 ---DSEGHIKIADFGMC---KENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFG 208

Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN-- 263
           ++LY +L+G  PF  E       +IM   + +      ++S  A  + + ++ + P    
Sbjct: 209 VLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAICKGLMTKHPGKRL 264

Query: 264 ---QITVAQILKHPW 275
                    I +H +
Sbjct: 265 GCGPEGERDIKEHAF 279

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score =  109 bits (276), Expect = 2e-28
 Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 23/177 (12%)

Query: 294 SRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG 353
            + K   +  + +K         L  E+ Q+ +E F   DT+ SGT+   E K  +  LG
Sbjct: 3   YKAKTVVSARRDQKKG----RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALG 58

Query: 354 STLTEVDVKQYMQAADIDGNGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILI 403
               + ++K+ +   D DG+GT      L +   +  +   ++     F +F   ++   
Sbjct: 59  FEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNS--- 115

Query: 404 RIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
                  IT  +L    KE      +  ++E++ E DR+ D  I  +EF   MK  +
Sbjct: 116 -----GTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 167

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  117 bits (295), Expect = 2e-28
 Identities = 63/270 (23%), Positives = 104/270 (38%), Gaps = 50/270 (18%)

Query: 59  RGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKRE------------------- 96
           +G  G +  C   +TG  +ACK + K     +  E     E                   
Sbjct: 194 KGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY 253

Query: 97  -----------HCDGGTLVDRIS--DRERYTERAAASVFRS--VVNALHACHSNGIMHRD 141
                        +GG L   I    +  + E  A  VF +  +   L   H   I++RD
Sbjct: 254 ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA--VFYAAEICCGLEDLHRERIVYRD 311

Query: 142 LKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDI 201
           LKPEN +    D++  ++ +D GLA    EG+  +  VGT  YMAPE++   +Y    D 
Sbjct: 312 LKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDW 368

Query: 202 WSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP 261
           W+ G +LY +++G  PF           +     +   +     S  A+ L  ++L +DP
Sbjct: 369 WALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDP 428

Query: 262 N-----NQITVAQILKHPWLNYENGEAWDR 286
                    +  ++ +HP     N   + R
Sbjct: 429 AERLGCRGGSAREVKEHPLFKKLN---FKR 455

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  113 bits (286), Expect = 2e-28
 Identities = 46/174 (26%), Positives = 66/174 (37%), Gaps = 26/174 (14%)

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMA 186
             L   HS+ ++HRDLKP+N +      +  +K  DFGLA  +        VV T  Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187

Query: 187 PELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM------SREI--DFK 238
           PE+L    Y   +D+WS G I   +      F   S    L  I+        E      
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247

Query: 239 SDPW---------------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
           + P                  I    KDL+ + L  +P  +I+    L HP+  
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  113 bits (285), Expect = 2e-28
 Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 6/174 (3%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+     +G  L   +  +       A ++ R + +AL A H+ G  HRD+KPEN + + 
Sbjct: 110 YVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSA 169

Query: 152 DDENATLKATDFGLAFFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILY 209
           DD        DFG+A    + K+ +    VGT  YMAPE           DI++   +LY
Sbjct: 170 DD---FAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLY 226

Query: 210 NLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
             L+G+ P+  + L   + A +++ I   S   P I  +   +I R + ++P +
Sbjct: 227 ECLTGSPPYQGDQL-SVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPED 279

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  117 bits (295), Expect = 2e-28
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 23/195 (11%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRS--VVNALHACHSNGIMHRDLKPENFIF 149
           Y   E+ +GG L+  I    R+ E  A  VF +  +   L    S GI++RDLK +N + 
Sbjct: 418 YFVMEYVNGGDLMYHIQQVGRFKEPHA--VFYAAEIAIGLFFLQSKGIIYRDLKLDNVML 475

Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVV----GTPLYMAPELLGPCKYGKEIDIWSAG 205
              D    +K  DFG+    +E            GTP Y+APE++    YGK +D W+ G
Sbjct: 476 ---DSEGHIKIADFGMC---KENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFG 529

Query: 206 LILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN-- 263
           ++LY +L+G  PF  E       +IM   + +      ++S  A  + + ++ + P    
Sbjct: 530 VLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAICKGLMTKHPGKRL 585

Query: 264 ---QITVAQILKHPW 275
                    I +H +
Sbjct: 586 GCGPEGERDIKEHAF 600

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score =  108 bits (273), Expect = 3e-28
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 22/156 (14%)

Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
             L  E I + K  F   D +  G ++  E    +  LG   T+ ++   ++  D DG+G
Sbjct: 12  AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71

Query: 375 TT-----LNLSLVQCKDTSLKD--------FNIFTKPSNILIRIMISIYITADELEAAFK 421
           T      L + + Q K+ +           F IF K ++         +I  +EL    +
Sbjct: 72  TIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNAD--------GFIDIEELGEILR 123

Query: 422 EYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
                  +  I+++M + D++ DGRI ++EF   M+
Sbjct: 124 ATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score =  108 bits (272), Expect = 4e-28
 Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 26/161 (16%)

Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           +  +L  EEI++ +E F++ D +  G +   +    +  +G   TE+++ +  Q  +++ 
Sbjct: 1   MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60

Query: 373 NGT-------TLNLSLVQCKDTSLKD-------FNIFTKPSNILIRIMISIYITADELEA 418
            G         L    +  +   +         F  F    +          I+  EL  
Sbjct: 61  GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGD--------GEISTSELRE 112

Query: 419 AFKEYNMGDDAT---IKEIMFEVDRDKDGRISYEEFCATMK 456
           A +   +G       I+EI+ +VD + DGR+ +EEF   M 
Sbjct: 113 AMRAL-LGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score =  109 bits (275), Expect = 4e-28
 Identities = 21/167 (12%), Positives = 52/167 (31%), Gaps = 22/167 (13%)

Query: 311 KVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD---------V 361
           +  VE+L  + + +  + F   D +  G +  DE      ++   +   D         V
Sbjct: 24  QFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAV 83

Query: 362 KQYMQAADIDGNGTT-----LNLSLVQCKDTSLKDFNIFTKPSNILIRIMISI------- 409
           + +     ++          +  + V  +    ++         +L      +       
Sbjct: 84  RVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDG 143

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            +  DEL+   K +++           + D DK G++   E     +
Sbjct: 144 TVDVDELKTMMKAFDV-PQEAAYTFFEKADTDKSGKLERTELVHLFR 189

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 2/75 (2%)

Query: 301 AMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
           A     +   +      P+         +  +D +  GT+  DE K  +      + +  
Sbjct: 106 ANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEA 163

Query: 361 VKQYMQAADIDGNGT 375
              + + AD D +G 
Sbjct: 164 AYTFFEKADTDKSGK 178

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score =  108 bits (271), Expect = 5e-28
 Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 27/170 (15%)

Query: 302 MSKLKKLALKVIVENLPAEEIQKHKETFKQMDTND-SGTLTYDEFKAGLSKLGSTLTEVD 360
           M  + K      VE L  E+  + K  F         G+++  E    +  LG   T  +
Sbjct: 1   MDDIYK----AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE 56

Query: 361 VKQYMQAADIDGNGTT-----LNLSLVQCKDTSLKD--------FNIFTKPSNILIRIMI 407
           +++ +   D DG+GT      L + +   KD S           F +F K ++       
Sbjct: 57  LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADG------ 110

Query: 408 SIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
             YI  +EL+   +       +  I+E+M + D++ DGRI Y+EF   MK
Sbjct: 111 --YIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  113 bits (286), Expect = 6e-28
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 30/177 (16%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
           +L   HS GI HRD+KP+N +   D  +  LK  DFG A     G+     + +  Y AP
Sbjct: 153 SLAYIHSIGICHRDIKPQNLL--LDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAP 210

Query: 188 EL-LGPCKYGKEIDIWSAGLILYNLLSGAQP-FWAESLYGTLTAIM------SREI---- 235
           EL  G   Y   IDIWS G ++  L+ G QP F  ES    L  I+      SRE     
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQG-QPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269

Query: 236 ----------DFKSDPW-----PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                       +  P+     P     A DLI R+L   P+ ++T  + L HP+ +
Sbjct: 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFD 326

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  114 bits (288), Expect = 6e-28
 Identities = 74/314 (23%), Positives = 127/314 (40%), Gaps = 56/314 (17%)

Query: 8   SQDSDSAAQQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKL---HFTIAEELCRGESGR 64
              +D   +Q             D+   ++  +  A    ++    F   + L +G  G+
Sbjct: 104 QTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGK 163

Query: 65  IYLCTENSTGLQFACKSISKTS--KSDEG------------------------------- 91
           + L  E +TG  +A K + K      DE                                
Sbjct: 164 VILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL 223

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFT 150
               E+ +GG L   +S    ++E  A      +V+AL   HS   +++RDLK EN +  
Sbjct: 224 CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML- 282

Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEVV----GTPLYMAPELLGPCKYGKEIDIWSAGL 206
             D++  +K TDFGL    +EG      +    GTP Y+APE+L    YG+ +D W  G+
Sbjct: 283 --DKDGHIKITDFGLC---KEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 337

Query: 207 ILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQI- 265
           ++Y ++ G  PF+ +        I+  EI F      T+   AK L+  +L +DP  ++ 
Sbjct: 338 VMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLG 393

Query: 266 ----TVAQILKHPW 275
                  +I++H +
Sbjct: 394 GGSEDAKEIMQHRF 407

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  112 bits (283), Expect = 7e-28
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 32/214 (14%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           +   E+ +GG L+  +  + +  E  A      +  AL+  H  GI++RDLK +N +   
Sbjct: 86  FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL-- 143

Query: 152 DDENATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
            D    +K TD+G+    +EG    +      GTP Y+APE+L    YG  +D W+ G++
Sbjct: 144 -DSEGHIKLTDYGMC---KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVL 199

Query: 208 LYNLLSGAQPFWAESLYGT---------LTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
           ++ +++G  PF                    I+ ++I        ++S  A  +++  L 
Sbjct: 200 MFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFLN 255

Query: 259 RDPNN------QITVAQILKHPWLNYENGEAWDR 286
           +DP        Q   A I  HP+    +   WD 
Sbjct: 256 KDPKERLGCHPQTGFADIQGHPFFRNVD---WDM 286

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  112 bits (283), Expect = 9e-28
 Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 33/176 (18%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVY-EEVVGTPLYM 185
            L   H + I+HRDLKP N +    DEN  LK  DFGLA  F    + Y  +VV T  Y 
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYTHQVV-TRWYR 179

Query: 186 APE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA-ESLYGTLTAI------------- 230
           APE L G   YG  +D+W+ G IL  LL    PF   +S    LT I             
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLR-VPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

Query: 231 -MSREIDFKSDP----------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
            M    D+ +            +        DLI+ + + +P  +IT  Q LK  +
Sbjct: 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  113 bits (285), Expect = 9e-28
 Identities = 56/177 (31%), Positives = 76/177 (42%), Gaps = 30/177 (16%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
           +L   HS GI HRD+KP+N +   D + A LK  DFG A     G+     + +  Y AP
Sbjct: 168 SLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 225

Query: 188 EL-LGPCKYGKEIDIWSAGLILYNLLSGAQP-FWAESLYGTLTAIM------SREI---- 235
           EL  G   Y   ID+WSAG +L  LL G QP F  +S    L  I+      +RE     
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLVEIIKVLGTPTREQIREM 284

Query: 236 ----------DFKSDPW-----PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                       K+ PW     P     A  L  R+L   P  ++T  +   H + +
Sbjct: 285 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 341

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  111 bits (281), Expect = 1e-27
 Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 37/184 (20%)

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVY-EEVVGTPLY 184
             L  CH N I+HRDLKP+N +    ++   LK  DFGLA  F      +  EVV T  Y
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWY 174

Query: 185 MAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI------------- 230
            AP+ L+G   Y   IDIWS G IL  +++G   F   +    L  I             
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP 234

Query: 231 -MSREIDFKSD----------------PWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
            +++   +  +                    +  +  D +  +L  +P+ +++  Q L H
Sbjct: 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294

Query: 274 PWLN 277
           PW  
Sbjct: 295 PWFA 298

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  111 bits (279), Expect = 1e-27
 Identities = 59/293 (20%), Positives = 107/293 (36%), Gaps = 44/293 (15%)

Query: 30  DDDDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD 89
                   TI G+ Y+          E+  G  G+++      TG   A K + ++   +
Sbjct: 6   SGKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKE 65

Query: 90  E-------------------------GYLKR-------EHCDGGTLVDRISDRERYTERA 117
           E                          ++         E         +   +    ER 
Sbjct: 66  ENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERI 125

Query: 118 AASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE 176
              +  ++V AL+     +G++HRD+KP N +    DE   +K  DFG++    + K  +
Sbjct: 126 LGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISGRLVDDKAKD 182

Query: 177 EVVGTPLYMAPELLGPCK-----YGKEIDIWSAGLILYNLLSGAQPFWA-ESLYGTLTAI 230
              G   YMAPE + P       Y    D+WS G+ L  L +G  P+   ++ +  LT +
Sbjct: 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV 242

Query: 231 MSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL-NYENGE 282
           +  E           S   +  ++  L +D   +    ++L+H ++  YE  E
Sbjct: 243 LQEEPPLLPGH-MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLE 294

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score =  105 bits (264), Expect = 4e-27
 Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 19/148 (12%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT--- 376
           E+ Q+ +E F   D + +GT+   E K  +  LG    + ++K+ +   D +G G     
Sbjct: 3   EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62

Query: 377 --LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DD 428
             L +   +  +   K+     F +F               I+   L+   KE      D
Sbjct: 63  DFLTVMTQKMSEKDTKEEILKAFKLFDDDET--------GKISFKNLKRVAKELGENLTD 114

Query: 429 ATIKEIMFEVDRDKDGRISYEEFCATMK 456
             ++E++ E DRD DG +S +EF   MK
Sbjct: 115 EELQEMIDEADRDGDGEVSEQEFLRIMK 142

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  111 bits (280), Expect = 4e-27
 Identities = 66/332 (19%), Positives = 122/332 (36%), Gaps = 67/332 (20%)

Query: 9   QDSDSAAQQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKL-HFTIAEELCRGESGRIYL 67
                  +       +   + ++ +  +    GKA   + L  F +   + RG   ++ L
Sbjct: 11  DYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLL 70

Query: 68  CTENSTGLQFACKSISK---TSKSDEGYLKRE----------------HC---------- 98
                T   +A + + K       D  +++ E                H           
Sbjct: 71  VRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130

Query: 99  -----DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD 153
                +GG L+  +  + +  E  A      +  AL+  H  GI++RDLK +N +    D
Sbjct: 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---D 187

Query: 154 ENATLKATDFGLAFFFEEGKVYEEVV----GTPLYMAPELLGPCKYGKEIDIWSAGLILY 209
               +K TD+G+    +EG    +      GTP Y+APE+L    YG  +D W+ G++++
Sbjct: 188 SEGHIKLTDYGMC---KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 244

Query: 210 NLLSGAQPFWAESLYGT---------LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRD 260
            +++G  PF                    I+ ++I        ++S  A  +++  L +D
Sbjct: 245 EMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKD 300

Query: 261 PNN------QITVAQILKHPWLNYENGEAWDR 286
           P        Q   A I  HP+    +   WD 
Sbjct: 301 PKERLGCHPQTGFADIQGHPFFRNVD---WDM 329

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  109 bits (275), Expect = 4e-27
 Identities = 73/293 (24%), Positives = 119/293 (40%), Gaps = 50/293 (17%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------- 90
            D +  FT  E++ +G  G ++   +N T    A K I      DE              
Sbjct: 18  ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77

Query: 91  ----------GYLKR-------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACH 133
                      YLK        E+  GG+ +D + +     E   A++ R ++  L   H
Sbjct: 78  DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLH 136

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEEVVGTPLYMAPELLGP 192
           S   +HRD+K  N + +   E+  +K  DFG+     +        VGTP +MAPE++  
Sbjct: 137 SEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ 193

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----SSS 248
             Y  + DIWS G+    L  G  P         L  I       K++P PT+    S  
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP------KNNP-PTLEGNYSKP 246

Query: 249 AKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRA 301
            K+ +   L ++P+ + T  ++LKH ++      A      T +I R K+++A
Sbjct: 247 LKEFVEACLNKEPSFRPTAKELLKHKFILR---NAKKTSYLTELIDRYKRWKA 296

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  110 bits (276), Expect = 4e-27
 Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 15/180 (8%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           Y+  E+ DG TL D +      T + A  V      AL+  H NGI+HRD+KP N + + 
Sbjct: 92  YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151

Query: 152 DDENATLKATDFGLAFFFEEGKVY----EEVVGTPLYMAPELLGPCKYGKEI----DIWS 203
            +    +K  DFG+A    +          V+GT  Y++PE       G  +    D++S
Sbjct: 152 TN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR----GDSVDARSDVYS 204

Query: 204 AGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
            G +LY +L+G  PF  +S        +  +    S     +S+    ++ + L ++P N
Sbjct: 205 LGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPEN 264

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  111 bits (279), Expect = 4e-27
 Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
           A+   HS GI HRD+KP+N +   + ++ TLK  DFG A      +     + +  Y AP
Sbjct: 153 AVGFIHSLGICHRDIKPQNLL--VNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAP 210

Query: 188 EL-LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGT-----LTAIM 231
           EL LG  +Y   ID+WS G +   L+ G   F  E+          + GT     +  + 
Sbjct: 211 ELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMN 270

Query: 232 SREIDFKSDPWPTIS----------SSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               + +                  S A DL+ ++L  +P+ +I   + + HP+ +
Sbjct: 271 PHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFD 326

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score =  105 bits (265), Expect = 8e-27
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 21/156 (13%)

Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           NGT      L +   + KDT  ++     F +F K  N         YI+A EL      
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG--------YISAAELRHVMTN 112

Query: 423 Y--NMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
               + D+  + E++ E D D DG+++YEEF   M 
Sbjct: 113 LGEKLTDE-EVDEMIREADIDGDGQVNYEEFVQMMT 147

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  112 bits (281), Expect = 9e-27
 Identities = 61/280 (21%), Positives = 107/280 (38%), Gaps = 67/280 (23%)

Query: 59  RGESGRIYLCTENSTGLQFACKSISK---TSKSDEGYLKRE------------------- 96
           RG  G ++ C   +TG  +ACK ++K     +        E                   
Sbjct: 195 RGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF 254

Query: 97  -----------HCDGGTL----VDRISDRERYTERAAASVFRS--VVNALHACHSNGIMH 139
                        +GG +     +   D   + E  A  +F +  +V+ L   H   I++
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA--IFYTAQIVSGLEHLHQRNIIY 312

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV----VGTPLYMAPELLGPCKY 195
           RDLKPEN +    D++  ++ +D GLA    E K  +       GTP +MAPELL   +Y
Sbjct: 313 RDLKPENVLL---DDDGNVRISDLGLA---VELKAGQTKTKGYAGTPGFMAPELLLGEEY 366

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTL----TAIMSREIDFKSDPWPTISSSAKD 251
              +D ++ G+ LY +++   PF A             ++ + + +        S ++KD
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKD 422

Query: 252 LIRRMLIRDPNN-----QITVAQILKHPWLNYENGEAWDR 286
               +L +DP         +   +  HP     +   W +
Sbjct: 423 FCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS---WRQ 459

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  110 bits (276), Expect = 9e-27
 Identities = 49/188 (26%), Positives = 77/188 (40%), Gaps = 41/188 (21%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
            +   HS GI+HRDLKP N +      + TLK  DFGLA       +    V T  Y AP
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195

Query: 188 ELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS--------------- 232
           E++    Y + +DIWS G I+  ++ G   F           ++                
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255

Query: 233 ------------REIDFK-----------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
                           F+           S+     +S A+DL+ +ML+ D + +I+V +
Sbjct: 256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 315

Query: 270 ILKHPWLN 277
            L+HP++N
Sbjct: 316 ALQHPYIN 323

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  108 bits (273), Expect = 1e-26
 Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 33/181 (18%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE----EVVGTPL 183
            L   HS  ++HRDLKP N     + E+  LK  DFGLA   +    ++    E + T  
Sbjct: 132 GLKYIHSANVLHRDLKPANLF--INTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKW 189

Query: 184 YMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGT-----L 227
           Y +P  LL P  Y K ID+W+AG I   +L+G   F                        
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDR 249

Query: 228 TAIMSREIDF-KSDPW----------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
             ++S    + ++D            P IS  A D + ++L   P +++T  + L HP++
Sbjct: 250 QELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309

Query: 277 N 277
           +
Sbjct: 310 S 310

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  108 bits (271), Expect = 1e-26
 Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 6/175 (3%)

Query: 92  YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT 151
           YL  E+ +G TL + I      +   A +    +++ +   H   I+HRD+KP+N +  +
Sbjct: 87  YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS 146

Query: 152 DDENATLKATDFGLAFFFEEGKVYE--EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILY 209
           +    TLK  DFG+A    E  + +   V+GT  Y +PE        +  DI+S G++LY
Sbjct: 147 NK---TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLY 203

Query: 210 NLLSGAQPFWAESLYGTLTAIMSREI-DFKSDPWPTISSSAKDLIRRMLIRDPNN 263
            +L G  PF  E+        +   + +  +D    I  S  ++I R   +D  N
Sbjct: 204 EMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKAN 258

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  109 bits (274), Expect = 1e-26
 Identities = 66/317 (20%), Positives = 99/317 (31%), Gaps = 76/317 (23%)

Query: 32  DDDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE- 90
             +   T   K  E     F    EL  G  G ++  +   +GL  A K I    K    
Sbjct: 16  RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 75

Query: 91  -----------------------GYLKR-------EHCDGGTLVDRISDRERYTERAAAS 120
                                   +          EH DGG+L   +    R  E+    
Sbjct: 76  NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 135

Query: 121 VFRSVVNALHACHSNG-IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVV 179
           V  +V+  L        IMHRD+KP N +  +  E   +K  DFG++    +       V
Sbjct: 136 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFV 191

Query: 180 GTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPF--------------------W 219
           GT  YM+PE L    Y  + DIWS GL L  +  G  P                      
Sbjct: 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAA 251

Query: 220 AESLYGTLTAIMSREIDFKSDPWPTI--------------------SSSAKDLIRRMLIR 259
                         +    S P   I                    S   +D + + LI+
Sbjct: 252 ETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK 311

Query: 260 DPNNQITVAQILKHPWL 276
           +P  +  + Q++ H ++
Sbjct: 312 NPAERADLKQLMVHAFI 328

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  108 bits (271), Expect = 2e-26
 Identities = 71/280 (25%), Positives = 110/280 (39%), Gaps = 63/280 (22%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------- 89
            D    + I  EL  G  G++Y      TG   A K I   S+ +               
Sbjct: 15  LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD 74

Query: 90  --------EGYLKR-------EHCDGGTLVDRISDRERY-TERAAASVFRSVVNALHACH 133
                     Y          E C GG +   + + +R  TE     V R ++ AL+  H
Sbjct: 75  HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 134

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE------VVGTPLYMAP 187
           S  I+HRDLK  N + T       ++  DFG++      K  +        +GTP +MAP
Sbjct: 135 SKRIIHRDLKAGNVLMT---LEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYWMAP 186

Query: 188 ELLGPCK-----YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW 242
           E++         Y  + DIWS G+ L  +     P    +    L  I       KSDP 
Sbjct: 187 EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA------KSDP- 239

Query: 243 PTI------SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           PT+      S   +D ++  L ++P  + + AQ+L+HP++
Sbjct: 240 PTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  111 bits (280), Expect = 2e-26
 Identities = 42/176 (23%), Positives = 66/176 (37%), Gaps = 26/176 (14%)

Query: 91  GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT 150
           GY+  E+  G +L       ++     A +    ++ AL   HS G+++ DLKPEN + T
Sbjct: 159 GYIVMEYVGGQSLKRSK--GQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT 216

Query: 151 TDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEI---DIWSAGLI 207
            +     LK  D G          +  + GTP + APE++            DI++ G  
Sbjct: 217 EE----QLKLIDLGAVSRINS---FGYLYGTPGFQAPEIVR----TGPTVATDIYTVGRT 265

Query: 208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNN 263
           L  L           + G            + DP      S   L+RR +  DP  
Sbjct: 266 LAALTLDLPTRNGRYVDGLP----------EDDPVLKTYDSYGRLLRRAIDPDPRQ 311

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  109 bits (273), Expect = 3e-26
 Identities = 52/199 (26%), Positives = 71/199 (35%), Gaps = 51/199 (25%)

Query: 127 NALHACHSNGIMHRDLKPEN-FIFTTDDENATLKATDFGLA-FFFEEGKVY----EEVVG 180
           + +H  H+N ++HRDLKP N  +     E   +K  D G A  F    K        VV 
Sbjct: 139 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV- 197

Query: 181 TPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE----I 235
           T  Y APE LLG   Y K IDIW+ G I   LL+    F         +     +    I
Sbjct: 198 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 257

Query: 236 -------------DFKSDPW--------------------------PTISSSAKDLIRRM 256
                        D K  P                               S A  L++++
Sbjct: 258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKL 317

Query: 257 LIRDPNNQITVAQILKHPW 275
           L  DP  +IT  Q ++ P+
Sbjct: 318 LTMDPIKRITSEQAMQDPY 336

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155

 Score =  102 bits (256), Expect = 6e-26
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 28/156 (17%)

Query: 319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT-- 376
           A+EI++  + FK++D ++SG+L+ +EF +      + L    V++ +   D DGNG    
Sbjct: 2   ADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPL----VQRVIDIFDTDGNGEVDF 57

Query: 377 ---LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEY---NM 425
              +            +      F I+    +         YI+  EL    K     N+
Sbjct: 58  KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDG--------YISNGELFQVLKMMVGNNL 109

Query: 426 GDD---ATIKEIMFEVDRDKDGRISYEEFCATMKTG 458
            D      + + +   D+D DGRIS+EEFCA +   
Sbjct: 110 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 145

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  107 bits (270), Expect = 6e-26
 Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 32/179 (17%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
            LH  H  G++HRDL P N +     +N  +   DF LA            V    Y AP
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILL---ADNNDITICDFNLAREDTADANKTHYVTHRWYRAP 202

Query: 188 E-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGT-----LTAIM 231
           E ++    + K +D+WSAG ++  + +    F   +          + GT     +    
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFS 262

Query: 232 SREI---------DFKSDPW----PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
           S            +  +  W    PT    A DLI +ML  +P  +I+  Q L+HP+  
Sbjct: 263 SPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  108 bits (272), Expect = 9e-26
 Identities = 49/188 (26%), Positives = 75/188 (39%), Gaps = 41/188 (21%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
            +   HS GI+HRDLKP N +      + TLK  DFGLA       +    V T  Y AP
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232

Query: 188 ELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS--------------- 232
           E++    Y + +DIWS G I+  ++     F           ++                
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292

Query: 233 ------------REIDFK-----------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQ 269
                         + F            S+     +S A+DL+ +ML+ DP  +I+V  
Sbjct: 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 352

Query: 270 ILKHPWLN 277
            L+HP++N
Sbjct: 353 ALQHPYIN 360

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147

 Score =  101 bits (254), Expect = 1e-25
 Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 22/156 (14%)

Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + +NL  E+I + KE F   D ++SG+++  E    +  LG + +E +V   M   D+DG
Sbjct: 1   MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60

Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           N        L L   Q K    +      F +F K  +          I+A EL+     
Sbjct: 61  NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDG--------LISAAELKHVLTS 112

Query: 423 Y--NMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
               + D   + E++ EV  D  G I+ ++F A + 
Sbjct: 113 IGEKLTDA-EVDEMLREVS-DGSGEINIKQFAALLS 146

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147

 Score = 41.3 bits (98), Expect = 1e-04
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 308 LALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQA 367
           L  + +  N   +E+    E FK  D N  G ++  E K  L+ +G  LT+ +V + ++ 
Sbjct: 72  LMSRQLKCNDSEQEL---LEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLRE 128

Query: 368 ADIDGNGT 375
              DG+G 
Sbjct: 129 VS-DGSGE 135

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  106 bits (266), Expect = 1e-25
 Identities = 66/311 (21%), Positives = 115/311 (36%), Gaps = 69/311 (22%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSI-----------------SKTSK 87
            D    F + E +  G  G++Y      TG   A K +                  K S 
Sbjct: 20  RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH 79

Query: 88  SD------EGYLKR-------------EHCDGGTLVD--RISDRERYTERAAASVFRSVV 126
                     ++K+             E C  G++ D  + +      E   A + R ++
Sbjct: 80  HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE------VVG 180
             L   H + ++HRD+K +N + T   ENA +K  DFG++      ++          +G
Sbjct: 140 RGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVS-----AQLDRTVGRRNTFIG 191

Query: 181 TPLYMAPELL-----GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI 235
           TP +MAPE++         Y  + D+WS G+    +  GA P         L  I     
Sbjct: 192 TPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP---- 247

Query: 236 DFKSDPWPTI-----SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDT 290
             ++   P +     S   +  I   L+++ + +    Q++KHP++  +  E   R    
Sbjct: 248 --RNPA-PRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLK 304

Query: 291 AIISRVKQFRA 301
             I R K+ R 
Sbjct: 305 DHIDRTKKKRG 315

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score =  100 bits (251), Expect = 2e-25
 Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 24/151 (15%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT--- 376
           +++ + KE F+  D+  +G +T +  +  L + G  +      +    AD  GNG     
Sbjct: 3   DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62

Query: 377 --LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDA 429
             L++   + K T+ +D     F  F              YI    L+ A     +GD  
Sbjct: 63  EFLSMMGRRMKQTTSEDILRQAFRTFDPEGTG--------YIPKAALQDALLN--LGDRL 112

Query: 430 T---IKEIMFEVDRDKDGRISYEEFCATMKT 457
                 E +   + +  G+I Y+ F  TM T
Sbjct: 113 KPHEFAEFLGITETE-KGQIRYDNFINTMFT 142

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score = 38.6 bits (91), Expect = 8e-04
 Identities = 7/64 (10%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 308 LALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQA 367
           +  + + +    + +   ++ F+  D   +G +     +  L  LG  L   +  +++  
Sbjct: 67  MMGRRMKQTTSEDIL---RQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGI 123

Query: 368 ADID 371
            + +
Sbjct: 124 TETE 127

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  105 bits (264), Expect = 3e-25
 Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 33/178 (18%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
            L   HS G++HRDLKP N      +E+  LK  DFGLA   +        V T  Y AP
Sbjct: 138 GLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLARHADAEMT--GYVVTRWYRAP 192

Query: 188 E-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGT-----LTAIM 231
           E +L    Y + +DIWS G I+  +L+G   F  +           + G      +  + 
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252

Query: 232 SREI--------DFKSDPW----PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
            +                +    P  S  A DL+ +ML  D + ++T AQ L HP+  
Sbjct: 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  105 bits (263), Expect = 4e-25
 Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 35/182 (19%)

Query: 128 ALHACH--SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYM 185
           ++   H  S  + HRD+KP N +   ++ + TLK  DFG A      +     + +  Y 
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVL--VNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYR 198

Query: 186 APEL-LGPCKYGKEIDIWSAGLILYNLLSGAQP-FWAESLYGTLTAIM------SREI-- 235
           APEL  G   Y   +DIWS G I   ++ G +P F  ++  G L  I+      SRE+  
Sbjct: 199 APELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPIFRGDNSAGQLHEIVRVLGCPSREVLR 257

Query: 236 ------------DFKSDPW--------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
                       + K  PW           +  A DL+  +L   P  ++   + L HP+
Sbjct: 258 KLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY 317

Query: 276 LN 277
            +
Sbjct: 318 FD 319

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score = 99.5 bits (249), Expect = 5e-25
 Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 21/155 (13%)

Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           E L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 2   EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61

Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEY- 423
           T      L+L   + K+   ++     F +F +  N          I+A EL        
Sbjct: 62  TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNG--------LISAAELRHVMTNLG 113

Query: 424 -NMGDDATIKEIMFEVDRDKDGRISYEEFCATMKT 457
             + DD  + E++ E D D DG I+YEEF   M +
Sbjct: 114 EKLTDD-EVDEMIREADIDGDGHINYEEFVRMMVS 147

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  105 bits (263), Expect = 5e-25
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 33/178 (18%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
            L   H+ GI+HRDLKP N      +E+  LK  DFGLA   +        V T  Y AP
Sbjct: 140 GLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQADSEMT--GYVVTRWYRAP 194

Query: 188 E-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGT-----LTAIM 231
           E +L   +Y + +DIWS G I+  +++G   F              + GT     +  + 
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 254

Query: 232 SREI--------DFKSDPW----PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
           S E         + +   +       S  A +L+ +ML+ D   ++T  + L HP+  
Sbjct: 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  104 bits (262), Expect = 6e-25
 Identities = 56/183 (30%), Positives = 80/183 (43%), Gaps = 37/183 (20%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE----EVVGTPL 183
            L   HS  ++HRDLKP N +    +    LK  DFGLA   +    +     E V T  
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196

Query: 184 YMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----------LYGT-----L 227
           Y APE +L    Y K IDIWS G IL  +LS    F  +           + G+     L
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256

Query: 228 TAIMSRE-------------IDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHP 274
             I++ +             + + +  +P   S A DL+ +ML  +P+ +I V Q L HP
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315

Query: 275 WLN 277
           +L 
Sbjct: 316 YLE 318

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  102 bits (257), Expect = 1e-24
 Identities = 55/269 (20%), Positives = 95/269 (35%), Gaps = 48/269 (17%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------- 90
                 EL RG  G +       +G   A K I  T  S E                   
Sbjct: 8   DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPF 67

Query: 91  ------GYLKR-------EHCDGGT--LVDRISDRE-RYTERAAASVFRSVVNALHACHS 134
                    +        E  D        ++ D+     E     +  S+V AL   HS
Sbjct: 68  TVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127

Query: 135 NG-IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE----L 189
              ++HRD+KP N +    +    +K  DFG++ +  +    +   G   YMAPE     
Sbjct: 128 KLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPE 184

Query: 190 LGPCKYGKEIDIWSAGLILYNLLSGAQPFWA-ESLYGTLTAIMSREI-DFKSDPWPTISS 247
           L    Y  + DIWS G+ +  L     P+ +  + +  L  ++        +D +   S+
Sbjct: 185 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SA 241

Query: 248 SAKDLIRRMLIRDPNNQITVAQILKHPWL 276
              D   + L ++   + T  ++++HP+ 
Sbjct: 242 EFVDFTSQCLKKNSKERPTYPELMQHPFF 270

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  103 bits (260), Expect = 1e-24
 Identities = 52/178 (29%), Positives = 71/178 (39%), Gaps = 33/178 (18%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
            L   HS  I+HRDLKP N      +E+  LK  DFGLA    +       V T  Y AP
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTADEMT--GYVATRWYRAP 198

Query: 188 E-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS-------REIDFKS 239
           E +L    Y + +DIWS G I+  LL+G   F        L  I+          +   S
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258

Query: 240 DP--------------------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                                 +   +  A DL+ +ML+ D + +IT AQ L H +  
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  103 bits (258), Expect = 2e-24
 Identities = 54/190 (28%), Positives = 76/190 (40%), Gaps = 43/190 (22%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE----------- 176
           A+   H + ++HRDLKP N +    + N  LK  DFGLA   +E                
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180

Query: 177 EVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM---- 231
           E V T  Y APE +L   KY + +D+WS G IL  L      F        L  I     
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240

Query: 232 --SREIDFKS------------------DPW----PTISSSAKDLIRRMLIRDPNNQITV 267
               + D +                    P     P ++    DL++RML+ DP  +IT 
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA 300

Query: 268 AQILKHPWLN 277
            + L+HP+L 
Sbjct: 301 KEALEHPYLQ 310

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  102 bits (257), Expect = 2e-24
 Identities = 51/191 (26%), Positives = 74/191 (38%), Gaps = 39/191 (20%)

Query: 120 SVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-----EEGKV 174
            V + ++N L+  H N I+HRD+K  N +      +  LK  DFGLA  F      +   
Sbjct: 128 RVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNR 184

Query: 175 Y-EEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES---------- 222
           Y   VV T  Y  PE LLG   YG  ID+W AG I+  + + +      +          
Sbjct: 185 YTNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 243

Query: 223 -----------------LYGTLTAIMSREIDFKSD-PWPTISSSAKDLIRRMLIRDPNNQ 264
                            LY  L  +  ++   K           A DLI ++L+ DP  +
Sbjct: 244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 303

Query: 265 ITVAQILKHPW 275
           I     L H +
Sbjct: 304 IDSDDALNHDF 314

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  101 bits (254), Expect = 3e-24
 Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 31/194 (15%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFR------SVVNALHACHSNGIMHRDLKPENFIF 149
           E+ +GG+L + +   E      AA            V  LH+     ++HRDLKP N + 
Sbjct: 79  EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL 138

Query: 150 TTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILY 209
                   LK  DFG A   +         G+  +MAPE+     Y ++ D++S G+IL+
Sbjct: 139 --VAGGTVLKICDFGTACDIQTHMTNN--KGSAAWMAPEVFEGSNYSEKCDVFSWGIILW 194

Query: 210 NLLSGAQPFWAESLYGTLTAIM------SREIDFKSDPWPTISSSA----KDLIRRMLIR 259
            +++  +PF  + + G    IM      +R         P +  +     + L+ R   +
Sbjct: 195 EVITRRKPF--DEIGGPAFRIMWAVHNGTR---------PPLIKNLPKPIESLMTRCWSK 243

Query: 260 DPNNQITVAQILKH 273
           DP+ + ++ +I+K 
Sbjct: 244 DPSQRPSMEEIVKI 257

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  102 bits (255), Expect = 4e-24
 Identities = 59/271 (21%), Positives = 100/271 (36%), Gaps = 50/271 (18%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------- 91
           +D +  F+   E+  G  G +Y   +       A K +S + K                 
Sbjct: 50  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109

Query: 92  -------------YLKR-------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHA 131
                        YL+        E+C G         ++   E   A+V    +  L  
Sbjct: 110 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 169

Query: 132 CHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE--EVVGTPLYMAPEL 189
            HS+ ++HRD+K  N + +   E   +K  DFG A       +      VGTP +MAPE+
Sbjct: 170 LHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSA-----SIMAPANSFVGTPYWMAPEV 221

Query: 190 LGPCK---YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI-DFKSDPWPTI 245
           +       Y  ++D+WS G+    L     P +  +    L  I   E    +S  W   
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW--- 278

Query: 246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
           S   ++ +   L + P ++ T   +LKH ++
Sbjct: 279 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  101 bits (254), Expect = 5e-24
 Identities = 55/279 (19%), Positives = 95/279 (34%), Gaps = 46/279 (16%)

Query: 41  GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE---------- 90
            + ++          E+ RG  G +       +G   A K I  T    E          
Sbjct: 14  EQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV 73

Query: 91  ---------------GYLKR-------EHCDGG--TLVDRISDR--ERYTERAAASVFRS 124
                             +        E            +     +   E     +  +
Sbjct: 74  VMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLA 133

Query: 125 VVNALHACHSNG-IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL 183
            V AL+    N  I+HRD+KP N +      +  +K  DFG++    +        G   
Sbjct: 134 TVKALNHLKENLKIIHRDIKPSNILLD---RSGNIKLCDFGISGQLVDSIAKTRDAGCRP 190

Query: 184 YMAPELLGPCK----YGKEIDIWSAGLILYNLLSGAQPFWA-ESLYGTLTAIMSREI-DF 237
           YMAPE + P      Y    D+WS G+ LY L +G  P+    S++  LT ++  +    
Sbjct: 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQL 250

Query: 238 KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
            +      S S  + +   L +D + +    ++LKHP++
Sbjct: 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 99.7 bits (249), Expect = 1e-23
 Identities = 59/279 (21%), Positives = 102/279 (36%), Gaps = 55/279 (19%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------- 90
            + + E +  G +  +          + A K I+                          
Sbjct: 16  DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75

Query: 91  -----GYLKR-------EHCDGGTLVDRISDRERY--------TERAAASVFRSVVNALH 130
                 ++ +       +   GG+++D I               E   A++ R V+  L 
Sbjct: 76  VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135

Query: 131 ACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL-AFFFEEGKVYEE-----VVGTPLY 184
             H NG +HRD+K  N +     E+ +++  DFG+ AF    G +         VGTP +
Sbjct: 136 YLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192

Query: 185 MAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAES----LYGTLT--AIMSREIDF 237
           MAPE++   + Y  + DIWS G+    L +GA P+        L  TL            
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ 252

Query: 238 KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
             +       S + +I   L +DP  + T A++L+H + 
Sbjct: 253 DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 96.4 bits (240), Expect = 2e-23
 Identities = 32/171 (18%), Positives = 51/171 (29%), Gaps = 23/171 (13%)

Query: 309 ALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSK-----LGSTLTEVDVKQ 363
             K+  +      I +HK  F  +D N +G ++ DE     S      LG+T  +    +
Sbjct: 2   NSKLTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHK 61

Query: 364 YMQAADIDGNGTT----------LNLSLVQCKDTSLKDFNIFTKPSNILIRIMISI---- 409
               A   G G            +        D   K          I    +  I    
Sbjct: 62  DAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKD 121

Query: 410 ---YITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
               IT DE +A  K   +       +E     D D+ G++  +E      
Sbjct: 122 QNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 54.8 bits (132), Expect = 6e-09
 Identities = 19/75 (25%), Positives = 31/75 (41%)

Query: 301 AMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
              KL    L+   +N P          F  +D + +G +T DE+KA     G   +  D
Sbjct: 87  GWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSED 146

Query: 361 VKQYMQAADIDGNGT 375
            ++  +  DID +G 
Sbjct: 147 CEETFRVCDIDESGQ 161

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 97.5 bits (243), Expect = 6e-23
 Identities = 31/176 (17%), Positives = 45/176 (25%), Gaps = 34/176 (19%)

Query: 89  DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI 148
             G +  E   GG+L +        +   A    +S+  A  A H  G+      P    
Sbjct: 104 AGGLVVAEWIRGGSLQEVA--DTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVR 161

Query: 149 FTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
            + D                   G V   V+  P  M            + DI   G  L
Sbjct: 162 VSID-------------------GDV---VLAYPATMPDA-------NPQDDIRGIGASL 192

Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW---PTISSSAKDLIRRMLIRDP 261
           Y LL    P     +   L            +P      I      +  R +  D 
Sbjct: 193 YALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDG 248

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score = 95.1 bits (237), Expect = 7e-23
 Identities = 26/156 (16%), Positives = 60/156 (38%), Gaps = 22/156 (14%)

Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
                + Q+  E F+ +DT+ SG ++  E  A LS  G   +    ++ +   D + +G 
Sbjct: 20  ARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGE 79

Query: 376 -------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE--YNMG 426
                   L+  ++  ++     F                  + ++E+ AA     Y + 
Sbjct: 80  ITFDEFKDLHHFILSMREG----FRKRDSSG--------DGRLDSNEVRAALLSSGYQV- 126

Query: 427 DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLR 462
            + T + +M + DR + G + ++++         +R
Sbjct: 127 SEQTFQALMRKFDRQRRGSLGFDDYVELSIFVCRVR 162

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 22/132 (16%), Positives = 47/132 (35%), Gaps = 42/132 (31%)

Query: 322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL 381
           I   +E F++ D++  G L  +E +A L   G  ++E   +  M+  D    G+      
Sbjct: 92  ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSL----- 146

Query: 382 VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRD 441
                     F+ +       + + I +      +   F  Y               DR+
Sbjct: 147 ---------GFDDY-------VELSIFV----CRVRNVFAFY---------------DRE 171

Query: 442 KDGRIS--YEEF 451
           + G+++  ++ F
Sbjct: 172 RTGQVTFTFDTF 183

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226

 Score = 95.3 bits (237), Expect = 1e-22
 Identities = 36/202 (17%), Positives = 66/202 (32%), Gaps = 38/202 (18%)

Query: 286 RPIDTAIIS--RVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTN--DSGTLT 341
           + + T+++    +  ++    L    L          EI+   E FK++ +   D G + 
Sbjct: 9   KHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLIN 68

Query: 342 YDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDF----NIFTK 397
            +EF+  L K     +     +     D   NG               ++F    ++F  
Sbjct: 69  KEEFQLALFKTNKKESLF-ADRVFDLFDTKHNGI-----------LGFEEFARALSVFHP 116

Query: 398 --PSNILIRIMISIY-------ITADELE----AAFKEYNMGDD-----ATIKEIMFEVD 439
             P +  I     +Y       I   E++    A   E  M          I +   E D
Sbjct: 117 NAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEAD 176

Query: 440 RDKDGRISYEEFCATMKTGTHL 461
              DG+I  EE+ + +     L
Sbjct: 177 TKHDGKIDKEEWRSLVLRHPSL 198

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 93.2 bits (232), Expect = 2e-22
 Identities = 29/157 (18%), Positives = 50/157 (31%), Gaps = 22/157 (14%)

Query: 319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG--STLTEVDVKQYM---------QA 367
              +QK K  F ++D +  G +T  +F++   +    S +     K  M           
Sbjct: 2   DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61

Query: 368 ADIDGNGTT-----LNLSLVQCKDTSLKDFNIFTKPSNILIRIM---ISIYITADELEAA 419
             + G         +N      K+   K   +   P  +  R +       I+ DE    
Sbjct: 62  TAVAGGKGIDETTFINSMKEMVKNPEAKS--VVEGPLPLFFRAVDTNEDNNISRDEYGIF 119

Query: 420 FKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           F    + D          +D + DG +S EEF     
Sbjct: 120 FGMLGL-DKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 16/116 (13%), Positives = 32/116 (27%), Gaps = 37/116 (31%)

Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
               +         F+ +DTN+   ++ DE+      LG  L +        A D + +G
Sbjct: 86  PEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNNDG 143

Query: 375 TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDAT 430
                                               ++ +E   A  ++ M D  +
Sbjct: 144 L-----------------------------------LSLEEFVIAGSDFFMNDGDS 164

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 92.5 bits (230), Expect = 5e-22
 Identities = 27/162 (16%), Positives = 59/162 (36%), Gaps = 18/162 (11%)

Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTL---------TEVDVKQ 363
           I E+  A  ++K K   +++D    G ++ ++++    ++             T  +  +
Sbjct: 4   ITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLR 63

Query: 364 YMQAADIDGNGT-TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISI-------YITADE 415
                 +      ++  + V   D+ LK        + I   IM          Y++  E
Sbjct: 64  VADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPE 123

Query: 416 LEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            +A  +       D         +D +K+G+IS +EF  T+ 
Sbjct: 124 FKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 90.6 bits (225), Expect = 1e-21
 Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 31/165 (18%)

Query: 319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL----GSTLTEVDVKQYM--------- 365
           A    + K+ F + D + +G L   +F+     +    G      +V+            
Sbjct: 3   AIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDY 62

Query: 366 --QAADIDGNGTT-----LNLSLVQCKDTSLKDFNIFTKPSNILIRIMISI-------YI 411
             + A +  +G+      + ++     +     FN    P   +++ ++ +        I
Sbjct: 63  LAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGP---VVKGIVGMCDKNADGQI 119

Query: 412 TADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            ADE  A      M   A   E   +VD + +G +S +E    ++
Sbjct: 120 NADEFAAWLTALGM-SKAEAAEAFNQVDTNGNGELSLDELLTAVR 163

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 20/114 (17%), Positives = 35/114 (30%), Gaps = 37/114 (32%)

Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
            +         K      D N  G +  DEF A L+ LG  +++ +  +     D +GNG
Sbjct: 94  ASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNG 151

Query: 375 TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDD 428
                                               ++ DEL  A ++++ G  
Sbjct: 152 -----------------------------------ELSLDELLTAVRDFHFGRL 170

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 17/110 (15%), Positives = 30/110 (27%), Gaps = 19/110 (17%)

Query: 354 STLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITA 413
           + +    +K+     D DGNG                DF    +       I  +    A
Sbjct: 2   TAIASDRLKKRFDRWDFDGNGAL-----------ERADFEKEAQ------HIAEAFGKDA 44

Query: 414 DELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRG 463
              E   +            +  E     DG ++ E+F    +     +G
Sbjct: 45  GAAEV--QTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQG 92

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207

 Score = 89.8 bits (223), Expect = 7e-21
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 34/190 (17%)

Query: 291 AIISRVKQFRAMSKLKKLALKVIVE--NLPAEEIQKHKETFKQMDTN--DSGTLTYDEFK 346
             +S+ K+  AM        +++        EE++   E FK++ ++  D G +  +EF+
Sbjct: 3   CSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQ 62

Query: 347 AGLSKLGSTLTEVDVKQYMQAADIDGNGT------TLNLSLVQCKDTSLKD-----FNIF 395
             L +  +        +     D+  NG         +L +       + +     F ++
Sbjct: 63  LALFRNRNRRNLF-ADRIFDVFDVKRNGVIEFGEFVRSLGVF-HPSAPVHEKVKFAFKLY 120

Query: 396 TKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKE---------IMFEVDRDKDGRI 446
                         +I  +EL+          +  + E            + DR  DG+I
Sbjct: 121 DLRQT--------GFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKI 172

Query: 447 SYEEFCATMK 456
             +E+   + 
Sbjct: 173 DIDEWKDFVS 182

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 302 MSKLKKLALKVIVENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSK 351
           + ++    L      L  + I+    + F Q D  + G +  DE+K  +S 
Sbjct: 133 LKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSL 183

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 88.3 bits (219), Expect = 9e-21
 Identities = 19/164 (11%), Positives = 50/164 (30%), Gaps = 32/164 (19%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTL---------------TEVDVKQY 364
           E  ++    F   D + +G +   +F      + +                  E   +  
Sbjct: 1   EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60

Query: 365 MQAADIDGNGTT-----LNLSLVQCKDTSLKDFNIFTKPSNILIRIMISI-------YIT 412
              AD DG+        +  ++ + +D   +    F + +   +   + +        +T
Sbjct: 61  AGIADRDGDQRITREEFVTGAVKRLRDKPDR----FAEMARPFLHAALGVADTDGDGAVT 116

Query: 413 ADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
             +   A   + +  +   ++    +D D DG++   E      
Sbjct: 117 VADTARALTAFGV-PEDLARQAAAALDTDGDGKVGETEIVPAFA 159

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 42.0 bits (99), Expect = 8e-05
 Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 16/81 (19%)

Query: 410 YITADELEAA----------------FKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCA 453
           +I   +   A                 +    G +A  + +    DRD D RI+ EEF  
Sbjct: 20  HIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVT 79

Query: 454 TMKTGTHLRGTSYRNLSHIFI 474
                   +   +  ++  F+
Sbjct: 80  GAVKRLRDKPDRFAEMARPFL 100

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 91.2 bits (227), Expect = 1e-20
 Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 17/189 (8%)

Query: 96  EHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTD 152
           E    G L  R+ D+           +   +   +    +    I+HRDL+  N    + 
Sbjct: 101 EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSL 160

Query: 153 DENA--TLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP--CKYGKEIDIWSAGLIL 208
           DENA    K  DFGL+   +       ++G   +MAPE +G     Y ++ D +S  +IL
Sbjct: 161 DENAPVCAKVADFGLS--QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218

Query: 209 YNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA----KDLIRRMLIRDPNNQ 264
           Y +L+G  PF  +         ++   +      PTI        +++I      DP  +
Sbjct: 219 YTILTGEGPF--DEYSYGKIKFINMIREEGLR--PTIPEDCPPRLRNVIELCWSGDPKKR 274

Query: 265 ITVAQILKH 273
              + I+K 
Sbjct: 275 PHFSYIVKE 283

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 90.4 bits (225), Expect = 1e-20
 Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 10/131 (7%)

Query: 96  EHCDGGTLVDRISDRERYTERA---AASVFRSVVNALHACHSNGIMHRDLKPEN-----F 147
           E   GG L   +S +    +     A  + R + N LH      I+HRDLK  N      
Sbjct: 86  EFARGGPLNRVLSGKRIPPDILVNWAVQIARGM-NYLHDEAIVPIIHRDLKSSNILILQK 144

Query: 148 IFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLI 207
           +   D  N  LK TDFGLA  +          G   +MAPE++    + K  D+WS G++
Sbjct: 145 VENGDLSNKILKITDFGLAREWHRTT-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVL 203

Query: 208 LYNLLSGAQPF 218
           L+ LL+G  PF
Sbjct: 204 LWELLTGEVPF 214

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 90.8 bits (226), Expect = 1e-20
 Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 10/130 (7%)

Query: 96  EHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           + C+G +L   +   E ++  +    + R     +   H+  I+HRDLK  N IF    E
Sbjct: 99  QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNN-IFL--HE 155

Query: 155 NATLKATDFGLA---FFFEEGKVYEEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLIL 208
           + T+K  DFGLA     +     +E++ G+ L+MAPE++       Y  + D+++ G++L
Sbjct: 156 DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 215

Query: 209 YNLLSGAQPF 218
           Y L++G  P+
Sbjct: 216 YELMTGQLPY 225

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 84.1 bits (209), Expect = 3e-20
 Identities = 34/65 (52%), Positives = 45/65 (69%)

Query: 311 KVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADI 370
           K + E L  EEI   KE FK +DT++SGT+T+DE K GL ++GS L E ++K  M AADI
Sbjct: 11  KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70

Query: 371 DGNGT 375
           D +GT
Sbjct: 71  DKSGT 75

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 48.7 bits (117), Expect = 8e-08
 Identities = 28/127 (22%), Positives = 42/127 (33%), Gaps = 48/127 (37%)

Query: 335 NDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQA---ADIDGNGTTLNLSLVQCKDTSLKD 391
           + SG +  D+       +   L+E ++    +     D D +GT                
Sbjct: 1   HSSGHIDDDDKH-----MAERLSEEEIGGLKELFKMIDTDNSGT---------------- 39

Query: 392 FNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDAT---IKEIMFEVDRDKDGRISY 448
                              IT DEL+   K   +G +     IK++M   D DK G I Y
Sbjct: 40  -------------------ITFDELKDGLK--RVGSELMESEIKDLMDAADIDKSGTIDY 78

Query: 449 EEFCATM 455
            EF A  
Sbjct: 79  GEFIAAT 85

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 91.1 bits (226), Expect = 4e-20
 Identities = 48/322 (14%), Positives = 94/322 (29%), Gaps = 91/322 (28%)

Query: 43  AYEDIKLHFTIAEELCRGES--GRIYLCTENSTGLQFACKSISKTSKSDEG--------- 91
           ++      + +   + +G      + L     TG     + I+  + S+E          
Sbjct: 19  SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELH 78

Query: 92  ----------------YLKR-------EHCDGGTLVD--RISDRERYTERAAASVFRSVV 126
                           ++              G+  D       +   E A A + + V+
Sbjct: 79  VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 138

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG-LAFFFEEGK-------VYEEV 178
            AL   H  G +HR +K  + I  +   +  +  +           G+         +  
Sbjct: 139 KALDYIHHMGYVHRSVKASH-ILIS--VDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYS 195

Query: 179 VGTPLYMAPELL--GPCKYGKEIDIWSAGLILYNLLSGAQPF------------------ 218
           V    +++PE+L      Y  + DI+S G+    L +G  PF                  
Sbjct: 196 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVP 255

Query: 219 ---------------------WAESLYGTLTAIMSREIDFKSDPWP---TISSSAKDLIR 254
                                    L  +LT    R  +  S   P   T S      + 
Sbjct: 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVE 315

Query: 255 RMLIRDPNNQITVAQILKHPWL 276
           + L R+P+ + + + +L H + 
Sbjct: 316 QCLQRNPDARPSASTLLNHSFF 337

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166

 Score = 86.1 bits (214), Expect = 5e-20
 Identities = 27/160 (16%), Positives = 47/160 (29%), Gaps = 26/160 (16%)

Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           +       EI+  KE F  +D N  G +  D+ +   + +G    + +    M     + 
Sbjct: 15  VFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAM---IKEA 71

Query: 373 NGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
           +G       L +   + K    +D     F +                I    LE     
Sbjct: 72  SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKG--------SIKKSFLEELLTT 123

Query: 423 YNMGD---DATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
              G       IK +      D  G + Y+  C  +  G 
Sbjct: 124 --GGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHGE 161

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 90.9 bits (226), Expect = 6e-20
 Identities = 53/210 (25%), Positives = 79/210 (37%), Gaps = 60/210 (28%)

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTP 182
            S++  L A H N I+H DLKPEN I       + +K  DFG + + E  +VY  +  + 
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPEN-ILLKQQGRSGIKVIDFGSSCY-EHQRVYTYIQ-SR 263

Query: 183 LYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM---------- 231
            Y APE +LG  +YG  ID+WS G IL  LL+G      E     L  ++          
Sbjct: 264 FYRAPEVILG-ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322

Query: 232 ----SREIDF-------------KSDPWPTISSSAKDL---------------------- 252
                R  +F                    + +  +                        
Sbjct: 323 LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDD 382

Query: 253 ------IRRMLIRDPNNQITVAQILKHPWL 276
                 +++ L  DP  ++T  Q L+HPWL
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143

 Score = 85.2 bits (212), Expect = 6e-20
 Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 27/156 (17%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT 376
               +IQ+ KE F  +D N  G +  ++    L+ +G   T+  ++  M     +  G  
Sbjct: 1   FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS----EAPGPI 56

Query: 377 -----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMG 426
                L +   +   T  +D     F  F + ++         +I  D L        MG
Sbjct: 57  NFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASG--------FIHEDHLRELLT--TMG 106

Query: 427 DDAT---IKEIMFEVDRDKDGRISYEEFCATMKTGT 459
           D  T   + E+  E   DK G  +Y EF   +K G 
Sbjct: 107 DRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGA 142

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score = 87.2 bits (216), Expect = 7e-20
 Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 31/185 (16%)

Query: 306 KKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG-STLTEVDVKQY 364
              ++    + +P +E      TF       SG  T  EFK  L   G +      + Q 
Sbjct: 5   NGKSIAGDQKAVPTQETHVWYRTFMMEYP--SGLQTLHEFKTLLGLQGLNQKANKHIDQV 62

Query: 365 MQAADIDGNGT---------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADE 415
               D + +G             +   + +      F ++    N          I  +E
Sbjct: 63  YNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGN--------GSIDKNE 114

Query: 416 LEAAFK-------EYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGTSYRN 468
           L   F        +  +  +  I  +  ++D + DG ++ EEF   M     L       
Sbjct: 115 LLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLL----EI 170

Query: 469 LSHIF 473
           +   F
Sbjct: 171 VYKSF 175

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 90.1 bits (224), Expect = 7e-20
 Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 69/216 (31%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE----------- 176
            +   HS G++HRD+KP N +    +    +K  DFGL+  F   +              
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177

Query: 177 -----------EVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES-- 222
                      + V T  Y APE LLG  KY K ID+WS G IL  +L G   F   S  
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237

Query: 223 --------LYGT-----LTAIMS----------------------------REIDFKSDP 241
                   +        + +I S                            + +  K +P
Sbjct: 238 NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINP 297

Query: 242 WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
               +  A DL+ ++L  +PN +I+    LKHP+++
Sbjct: 298 KADCNEEALDLLDKLLQFNPNKRISANDALKHPFVS 333

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 88.5 bits (220), Expect = 1e-19
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 11/130 (8%)

Query: 96  EHCDGGTLVD---RISDRERYTERAAASVFRSV---VNALHACHSNGIMHRDLKPENFIF 149
           E+   G+L     +   RE+  ER   S+   V   +N LH  +   I+HR+LK  N + 
Sbjct: 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLV 172

Query: 150 TTDDENATLKATDFGLAFFFEEGKVY-EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLIL 208
              D+  T+K  DFGL+       +  +   GTP +MAPE+L      ++ D++S G+IL
Sbjct: 173 ---DKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVIL 229

Query: 209 YNLLSGAQPF 218
           + L +  QP+
Sbjct: 230 WELATLQQPW 239

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 87.7 bits (218), Expect = 1e-19
 Identities = 30/152 (19%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE 188
           LH      I    L   + +    DE+ T + +   + F F+        +  P ++APE
Sbjct: 127 LHTL-EPLIPRHALNSRSVMI---DEDMTARISMADVKFSFQSPG----RMYAPAWVAPE 178

Query: 189 LL---GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD----P 241
            L         +  D+WS  ++L+ L++   PF   +    +   M   +  +      P
Sbjct: 179 ALQKKPEDTNRRSADMWSFAVLLWELVTREVPF---ADLSNMEIGMK--VALEGLRPTIP 233

Query: 242 WPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
            P IS     L++  +  DP  +     I+  
Sbjct: 234 -PGISPHVSKLMKICMNEDPAKRPKFDMIVPI 264

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 88.2 bits (219), Expect = 1e-19
 Identities = 40/169 (23%), Positives = 63/169 (37%), Gaps = 23/169 (13%)

Query: 75  LQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS 134
           L F    ++    S + +L   + + G+L D +         +   +  S+ + L   H 
Sbjct: 65  LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHI 123

Query: 135 --------NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV-----VGT 181
                     I HRDLK +N +     +N      D GLA    +     +V     VGT
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNIL---VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180

Query: 182 PLYMAPELL------GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY 224
             YMAPE+L            K +DIW+ GL+L+ +            Y
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY 229

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 84.1 bits (209), Expect = 2e-19
 Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 21/150 (14%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNL 379
               + +E F+  D ++ G ++ +E  + L  LG   T  ++       +          
Sbjct: 2   ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFK 61

Query: 380 SLVQCKDTSLKD--------FNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDAT- 430
           ++ +    +  +        F    K  N          I   EL       N+GD  T 
Sbjct: 62  TVYRKPIKTPTEQSKEMLDAFRALDKEGNG--------TIQEAELRQLLL--NLGDALTS 111

Query: 431 --IKEIMFEVDRDKDGRISYEEFCATMKTG 458
             ++E+M EV    DG I+YE F   + TG
Sbjct: 112 SEVEELMKEVSVSGDGAINYESFVDMLVTG 141

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 88.2 bits (219), Expect = 2e-19
 Identities = 37/197 (18%), Positives = 71/197 (36%), Gaps = 28/197 (14%)

Query: 96  EHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
             C G TL   + D +          + + +V  +   H+ GI+H+DLK +N  +    +
Sbjct: 109 SLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY----D 164

Query: 155 NATLKATDFGLA------FFFEEGKVYEEVVGTPLYMAPELL---------GPCKYGKEI 199
           N  +  TDFGL                    G   ++APE++             + K  
Sbjct: 165 NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHS 224

Query: 200 DIWSAGLILYNLLSGAQPF---WAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM 256
           D+++ G I Y L +   PF    AE++   +   M   +         +     D++   
Sbjct: 225 DVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNL-----SQIGMGKEISDILLFC 279

Query: 257 LIRDPNNQITVAQILKH 273
              +   + T  +++  
Sbjct: 280 WAFEQEERPTFTKLMDM 296

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 89.6 bits (222), Expect = 2e-19
 Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 23/156 (14%)

Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           + L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363

Query: 375 TT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
           T      L +   + KDT  ++     F +F K  N         YI+A EL        
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN--------GYISAAELRHVMTN-- 413

Query: 425 MGDDAT---IKEIMFEVDRDKDGRISYEEFCATMKT 457
           +G+  T   + E++ E D D DG+++YEEF   M  
Sbjct: 414 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156

 Score = 84.1 bits (209), Expect = 2e-19
 Identities = 28/165 (16%), Positives = 65/165 (39%), Gaps = 28/165 (16%)

Query: 309 ALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAA 368
           A   ++  LP ++IQ+ KE F  +D +  G ++ ++ KA   +LG    + ++   ++  
Sbjct: 4   AASGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK-- 61

Query: 369 DIDGNGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEA 418
             +  G       L++   +   T  ++     F +F +             +  + ++ 
Sbjct: 62  --EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETK--------KLNIEYIKD 111

Query: 419 AFKEYNMGDDAT---IKEIMFEVDRDKDGRISYEEFCATMKTGTH 460
             +   MGD+     ++    E   +  G+  Y +F A +K    
Sbjct: 112 LLEN--MGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGSGE 153

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 87.8 bits (218), Expect = 5e-19
 Identities = 45/205 (21%), Positives = 71/205 (34%), Gaps = 54/205 (26%)

Query: 123 RSVVNALHACHSN-GIMHRDLKPENFIFTTDDENA---TLKATDFGLAFFFEEGKVYEEV 178
           + ++  L   H   GI+H D+KPEN +    D       +K  D G A +  +      +
Sbjct: 138 KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW-YDEHYTNSI 196

Query: 179 VGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGT------LTAIM 231
             T  Y +PE LLG   +G   DIWS   +++ L++G   F  +  +        +  I+
Sbjct: 197 Q-TREYRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254

Query: 232 --------------------------SREIDFKSDPWPTISSSAK-------------DL 252
                                      R I  K   WP      +             D 
Sbjct: 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNIS-KLKFWPLEDVLTEKYKFSKDEAKEISDF 313

Query: 253 IRRMLIRDPNNQITVAQILKHPWLN 277
           +  ML  DP  +     ++ HPWL 
Sbjct: 314 LSPMLQLDPRKRADAGGLVNHPWLK 338

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 86.6 bits (215), Expect = 9e-19
 Identities = 52/211 (24%), Positives = 76/211 (36%), Gaps = 60/211 (28%)

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDD----------------ENATLKATDFGLA 166
             + +AL   H N + H DLKPEN +F   +                +N +++  DFG A
Sbjct: 130 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 189

Query: 167 FFFEEGKVYEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG 225
            F  E      +V T  Y  PE +L    + +  D+WS G IL+    G   F       
Sbjct: 190 TFDHE-HHT-TIVATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246

Query: 226 TLTAIM--------------SREIDFKSD--PWPTISSSAK------------------- 250
            L  +                ++  F      W   SS  +                   
Sbjct: 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLE 306

Query: 251 -----DLIRRMLIRDPNNQITVAQILKHPWL 276
                DL+RRML  DP  +IT+A+ L HP+ 
Sbjct: 307 HVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 82.6 bits (204), Expect = 2e-18
 Identities = 20/171 (11%), Positives = 46/171 (26%), Gaps = 27/171 (15%)

Query: 312 VIVENLPAEEIQKHKETFKQM-DTNDSGTLTYDEFKAGLSKLGS---------------T 355
           +    L   +  K    F    D N  G + +D+F+  + K+ +                
Sbjct: 1   MAAHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARA 60

Query: 356 LTEVDVKQYMQAADIDGNGT-TLN--LSLVQCKDTSLKDFNIFTKPSNILIRIMISI--- 409
             ++      + AD + +   T    L +      S++      +     +  M  +   
Sbjct: 61  TLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDT 120

Query: 410 ----YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
                I   E    +  Y +   +        +       ++ E F     
Sbjct: 121 SGDNIIDKHEYSTVYMSYGI-PKSDCDAAFDTLSDGGKTMVTREIFARLWT 170

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 45.6 bits (108), Expect = 7e-06
 Identities = 15/122 (12%), Positives = 27/122 (22%), Gaps = 37/122 (30%)

Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           E+LP    +     F   DT+    +   E+       G  + + D           G  
Sbjct: 101 ESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPKSDCDAAFDTLSDGGKT 158

Query: 375 TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEI 434
                                               +T +     + EY + +D   K  
Sbjct: 159 -----------------------------------MVTREIFARLWTEYFVSNDRGAKGN 183

Query: 435 MF 436
             
Sbjct: 184 HL 185

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 86.3 bits (214), Expect = 2e-18
 Identities = 51/228 (22%), Positives = 73/228 (32%), Gaps = 82/228 (35%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---- 183
             +  H +GI+HRDLKP N +    +++ ++K  DFGLA      K    V         
Sbjct: 141 GENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEP 197

Query: 184 -------------------YMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL 223
                              Y APE +L    Y K IDIWS G I   LL+  Q    +  
Sbjct: 198 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPT 257

Query: 224 Y------GTLTAIMSREIDFKSD------------------------------------- 240
                  G+    +S + + K                                       
Sbjct: 258 NRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIK 317

Query: 241 --------PWPTI----SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                            S    +L+  ML  +PN +IT+ Q L HP+L
Sbjct: 318 LFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL 365

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190

 Score = 81.8 bits (202), Expect = 2e-18
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 19/174 (10%)

Query: 300 RAMSKLKKLALKVIVE--NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLT 357
           ++ SKL +  L+ +V       +E+Q+  + F +     SG L   EF+    +      
Sbjct: 3   KSQSKLSQDQLQDLVRSTRFDKKELQQWYKGFFKDC--PSGHLNKSEFQKIYKQFFPFGD 60

Query: 358 E-VDVKQYMQAADIDGNGT----TLNLSLVQCKDTSLKD-----FNIFTKPSNILI---- 403
                +      D D NG         +L       L D     F ++   +N LI    
Sbjct: 61  PSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDE 120

Query: 404 -RIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
              ++              E     +  + +I   +D++KDG+++ EEFC   K
Sbjct: 121 MLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSK 174

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 293 ISRVKQFRAMSKLKKLALKVIVENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSK 351
           IS  +  R +  + K+   ++      +  +K   + F  MD N  G LT +EF  G  +
Sbjct: 116 ISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR 175

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 85.5 bits (212), Expect = 3e-18
 Identities = 46/217 (21%), Positives = 74/217 (34%), Gaps = 67/217 (30%)

Query: 123 RSVVNALHACHSN--GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG 180
           + +  AL    +    I+H DLKPEN I   + + + +K  DFG +    + ++Y+ +  
Sbjct: 164 QQMCTALLFLATPELSIIHCDLKPEN-ILLCNPKRSAIKIVDFGSSCQLGQ-RIYQYIQ- 220

Query: 181 TPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM-------- 231
           +  Y +PE LLG   Y   ID+WS G IL  + +G   F   +    +  I+        
Sbjct: 221 SRFYRSPEVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPA 279

Query: 232 -------------SREIDFKSDPWPTISSSAK---------------------------- 250
                         +  D   +   T     +                            
Sbjct: 280 HILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGES 339

Query: 251 -----------DLIRRMLIRDPNNQITVAQILKHPWL 276
                      DLI RML  DP  +I     L+H + 
Sbjct: 340 GHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109

 Score = 78.9 bits (195), Expect = 4e-18
 Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 4/94 (4%)

Query: 285 DRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDE 344
           D      I   +  F A           +V  L  +     K+ F  +D + SG +  DE
Sbjct: 4   DLLSAEDIKKAIGAFTAADSFDHKKFFQMV-GLKKKSADDVKKVFHILDKDKSGFIEEDE 62

Query: 345 FKAGLSKL---GSTLTEVDVKQYMQAADIDGNGT 375
             + L         L+  + K  M A D DG+G 
Sbjct: 63  LGSILKGFSSDARDLSAKETKTLMAAGDKDGDGK 96

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 84.2 bits (209), Expect = 5e-18
 Identities = 53/212 (25%), Positives = 78/212 (36%), Gaps = 60/212 (28%)

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDD----------------ENATLKATDFGLA 166
             +  +++  HSN + H DLKPEN +F   D                 N  +K  DFG A
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184

Query: 167 FFFEEGKVYEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG 225
            + +E      +V T  Y APE +L    + +  D+WS G IL     G   F       
Sbjct: 185 TYDDE-HHS-TLVSTRHYRAPEVILA-LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241

Query: 226 TLTAIM--------------SREIDFKSD--PWPTISSSAK------------------- 250
            L  +                +   F  D   W   SS+ +                   
Sbjct: 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVE 301

Query: 251 -----DLIRRMLIRDPNNQITVAQILKHPWLN 277
                DLI++ML  DP  +IT+ + LKHP+ +
Sbjct: 302 HERLFDLIQKMLEYDPAKRITLREALKHPFFD 333

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score = 77.7 bits (192), Expect = 1e-17
 Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 21/116 (18%)

Query: 352 LGSTLTEVDVKQYMQAADIDGNGT-------TLNLSLVQCKDTSLKDFNIFTKPSNILIR 404
               L + DV   ++A +     +              +  D   K F +  +       
Sbjct: 3   FSGILADADVAAALKACE--AADSFNYKAFFAKVGLTAKSADDIKKAFFVIDQDK----- 55

Query: 405 IMISIYITADELEAAFKEYNMG----DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
              S +I  DEL+   + ++ G     DA  K  +   D D DG I  +E+ A +K
Sbjct: 56  ---SGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score = 44.2 bits (105), Expect = 7e-06
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 326 KETFKQMDTNDSGTLTYDEFK---AGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           K+ F  +D + SG +  DE K      S     LT+ + K +++A D DG+G
Sbjct: 45  KKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDG 96

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 78.8 bits (195), Expect = 2e-17
 Identities = 24/148 (16%), Positives = 53/148 (35%), Gaps = 23/148 (15%)

Query: 318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGST-LTEVDVKQYMQAADIDGNGT- 375
              +       F+++D + SG ++  E +  LS    T    V V+  +   D +     
Sbjct: 2   ALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGV 61

Query: 376 ------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE--YNMGD 427
                  +   +   ++     F  + + +        S  I  +EL+ A     Y +  
Sbjct: 62  NFSEFTGVWKYITDWQNV----FRTYDRDN--------SGMIDKNELKQALSGFGYRL-S 108

Query: 428 DATIKEIMFEVDRDKDGRISYEEFCATM 455
           D     ++ + DR   G+I++++F    
Sbjct: 109 DQFHDILIRKFDRQGRGQIAFDDFIQGC 136

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 42/136 (30%)

Query: 322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL 381
           I   +  F+  D ++SG +  +E K  LS  G  L++      ++  D  G G       
Sbjct: 73  ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQI----- 127

Query: 382 VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRD 441
                     F+ F       I+  I +      L   F+ Y               D D
Sbjct: 128 ---------AFDDF-------IQGCIVL----QRLTDIFRRY---------------DTD 152

Query: 442 KDGRIS--YEEFCATM 455
           +DG I   YE++ + +
Sbjct: 153 QDGWIQVSYEQYLSMV 168

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 411 ITADELEAAFKE--YNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           I+  EL+ A     +   +  T++ I+   DR+    +++ EF    K
Sbjct: 24  ISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 71

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229

 Score = 80.3 bits (198), Expect = 2e-17
 Identities = 32/195 (16%), Positives = 68/195 (34%), Gaps = 33/195 (16%)

Query: 285 DRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDE 344
           +  ++ ++   ++      + + L L         +E+Q     FK      SG +  + 
Sbjct: 29  EAGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGFKNEC--PSGVVNEET 86

Query: 345 FKAGLSKLGSTLTEVDVKQYM-QAADIDGNGTTLN----LSLVQCKDTSLKD-----FNI 394
           FK   S+            ++  A D D NG          L      ++++     FN+
Sbjct: 87  FKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNL 146

Query: 395 FTKPSNILIRIMISIYITADELE----AAFKEYNMGDDATIKE---------IMFEVDRD 441
           +    +         YIT +E+     A +          +KE            ++D++
Sbjct: 147 YDINKDG--------YITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKN 198

Query: 442 KDGRISYEEFCATMK 456
           KDG ++ +EF  + +
Sbjct: 199 KDGVVTIDEFIESCQ 213

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229

 Score = 42.9 bits (101), Expect = 9e-05
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 293 ISRVKQFRAMSKLKKLALKVIVENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSK 351
           I++ +    M  +  +  K     L  +  ++H +  F++MD N  G +T DEF     K
Sbjct: 155 ITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK 214

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 80.7 bits (199), Expect = 2e-17
 Identities = 21/174 (12%), Positives = 49/174 (28%), Gaps = 41/174 (23%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD------VKQYMQAADI 370
                  +  E +   D + SG L   E +  + +L     +        +K ++     
Sbjct: 10  SSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQ 69

Query: 371 DGNGT-------------TLNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYIT 412
             +G                 L L +C+     +     +  +    +         +I 
Sbjct: 70  RDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSG--------FIE 121

Query: 413 ADELEAAFKEYNMGDDAT---------IKEIMFEVDRDKDGRISYEEFCATMKT 457
            +EL+   K+     + T            ++   D + DG++   E    +  
Sbjct: 122 TEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPV 175

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 67.6 bits (165), Expect = 8e-13
 Identities = 26/157 (16%), Positives = 52/157 (33%), Gaps = 25/157 (15%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEV--------DVKQYMQAADIDGNGTTL 377
            +T+++ DT+ SG +  +E K  L  L     +              ++  D + +G  L
Sbjct: 106 MKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDG-KL 164

Query: 378 NLS----LVQCKDTSLKDFNIFTKPSNILIRIMISI------YITADELEAAFKEY--NM 425
            L+    L+  ++  L  F           +           YI  +EL+A  K+     
Sbjct: 165 ELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKN 224

Query: 426 GDDATIKEIM----FEVDRDKDGRISYEEFCATMKTG 458
             +  I  I       +     G++   +    +  G
Sbjct: 225 KQELDINNISTYKKNIMALSDGGKLYRTDLALILSAG 261

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 10/66 (15%), Positives = 20/66 (30%), Gaps = 7/66 (10%)

Query: 410 YITADELEAAFKE--YNMGDDAT-----IKEIMFEVDRDKDGRISYEEFCATMKTGTHLR 462
           Y+   EL+   +E               +K  + +  +  DG+I   E    + T  +  
Sbjct: 32  YLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFL 91

Query: 463 GTSYRN 468
                 
Sbjct: 92  LLFRCQ 97

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score = 79.5 bits (196), Expect = 3e-17
 Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 20/162 (12%)

Query: 315 ENLPAEEIQKHKETFKQ-MDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
             + A +  + +E +K+ ++   SGTL   EFK       +      V+   +A D +G+
Sbjct: 14  GAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGD 73

Query: 374 GT--------TLNLSLVQCKDTSLKD-FNIFTKPSNILI------RIMISIY----ITAD 414
            T         LNL L    +  LK  F I+ K  N  I       I+ SIY      + 
Sbjct: 74  NTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSV 133

Query: 415 ELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           E+EA  +   +  +  +  I   VD + DG++S  EF    +
Sbjct: 134 EVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR 175

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 80.1 bits (197), Expect = 5e-17
 Identities = 28/173 (16%), Positives = 53/173 (30%), Gaps = 31/173 (17%)

Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD----------VKQYM 365
                +     + ++  D +D+G +   E       +   L   D           K +M
Sbjct: 4   AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFM 63

Query: 366 QAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMI------------SIYITA 413
            A D   +G      L        ++F +  +    L   +             S YI+A
Sbjct: 64  SAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISA 123

Query: 414 DELEAAFKEYNMGD---------DATIKEIMFEVDRDKDGRISYEEFCATMKT 457
            EL+   K+  +           D     +M   D++KDGR+   +    +  
Sbjct: 124 AELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILAL 176

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 66.6 bits (162), Expect = 2e-12
 Identities = 28/187 (14%), Positives = 55/187 (29%), Gaps = 30/187 (16%)

Query: 300 RAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS----- 354
             +   ++  L +     P +   +  + +++ D + SG ++  E K  L  L       
Sbjct: 81  NMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKK 140

Query: 355 ---TLTEVDVKQYMQAADIDGNGT---------------------TLNLSLVQCKDTSLK 390
                 +      M+  D + +G                          S V+ K    K
Sbjct: 141 IPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEK 200

Query: 391 DFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMF-EVDRDKDGRISYE 449
            F  +       +          D +E      + GD    +E +    D +KDG+I   
Sbjct: 201 IFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKS 260

Query: 450 EFCATMK 456
           E    + 
Sbjct: 261 ELALCLG 267

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 14/72 (19%), Positives = 20/72 (27%), Gaps = 11/72 (15%)

Query: 410 YITADELEAAFKEYNMGDDAT-----------IKEIMFEVDRDKDGRISYEEFCATMKTG 458
           YI   EL+  F+                     K  M   D   DGR+  EE    +   
Sbjct: 27  YIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQ 86

Query: 459 THLRGTSYRNLS 470
                  +R  +
Sbjct: 87  EENFLLIFRREA 98

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 80.6 bits (199), Expect = 7e-17
 Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 23/148 (15%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN--------GIMHRDLKPENF 147
           ++ + G+L D ++ R   T      +  S  + L   H           I HRDLK +N 
Sbjct: 120 DYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI 178

Query: 148 IFTTDDENATLKATDFGLAFFFEEGKVYEEV-----VGTPLYMAPELL------GPCKYG 196
           +     +N T    D GLA   +      ++     VGT  YMAPE+L         +  
Sbjct: 179 LV---KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 235

Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLY 224
           K  DI++ GL+ + +            Y
Sbjct: 236 KRADIYAMGLVFWEIARRCSIGGIHEDY 263

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score = 76.1 bits (188), Expect = 1e-16
 Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 26/157 (16%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADID--GNG 374
              +++++ KE F+  D    G + Y +    +  LG   T  +V + +     D   + 
Sbjct: 4   FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSR 63

Query: 375 T-------TLNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
                    +  ++ + +     +     F +F K  N          +   EL      
Sbjct: 64  RVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNG--------KVMGAELRHVLT- 114

Query: 423 YNMGDDATIKEI--MFEVDRDKDGRISYEEFCATMKT 457
             +G+  T +E+  +     D +G I+YE F   + +
Sbjct: 115 -TLGEKMTEEEVETVLAGHEDSNGCINYEAFLKHILS 150

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109

 Score = 74.6 bits (184), Expect = 1e-16
 Identities = 28/145 (19%), Positives = 49/145 (33%), Gaps = 48/145 (33%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG-STLTEVDVKQYMQAADIDGNGT 375
           L A++I+    + +      + +  Y  F    S +G S+ T   +K+     D D +G 
Sbjct: 7   LSAKDIESALSSCQ-----AADSFNYKSF---FSTVGLSSKTPDQIKKVFGILDQDKSG- 57

Query: 376 TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG----DDATI 431
                                             +I  +EL+   K ++        A  
Sbjct: 58  ----------------------------------FIEEEELQLFLKNFSSSARVLTSAET 83

Query: 432 KEIMFEVDRDKDGRISYEEFCATMK 456
           K  +   D D DG+I  EEF + +K
Sbjct: 84  KAFLAAGDTDGDGKIGVEEFQSLVK 108

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score = 74.2 bits (183), Expect = 2e-16
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 289 DTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAG 348
            + I + ++  +A           I   +  +   + KE F+ +D + SG +  DE K  
Sbjct: 8   PSDIAAALRDCQAPDSFSPKKFFQISG-MSKKSSSQLKEIFRILDNDQSGFIEEDELKYF 66

Query: 349 LSKLGS---TLTEVDVKQYMQAADIDGNGT 375
           L +  S    LT  + K ++ AAD DG+G 
Sbjct: 67  LQRFESGARVLTASETKTFLAAADHDGDGK 96

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score = 63.1 bits (154), Expect = 1e-12
 Identities = 21/116 (18%), Positives = 38/116 (32%), Gaps = 19/116 (16%)

Query: 352 LGSTLTEVDVKQYMQAADIDGN------GTTLNLSLVQCKDTSLKDFNIFTKPSNILIRI 405
           L   L+  D+   ++      +           +S         + F I           
Sbjct: 2   LTDILSPSDIAAALRDCQAPDSFSPKKFFQISGMSKKSSSQLK-EIFRILDNDQ------ 54

Query: 406 MISIYITADELEAAFKEYNMGD----DATIKEIMFEVDRDKDGRISYEEFCATMKT 457
             S +I  DEL+   + +  G      +  K  +   D D DG+I  EEF   +++
Sbjct: 55  --SGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQS 108

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 80.6 bits (199), Expect = 2e-16
 Identities = 52/237 (21%), Positives = 78/237 (32%), Gaps = 92/237 (38%)

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY------------ 175
            +   HS GI+HRDLKP N +    +++ ++K  DFGLA   +  +              
Sbjct: 168 GVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224

Query: 176 -----------------EEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQP 217
                              VV T  Y APE +L    Y + ID+WS G I   LL+  + 
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVV-TRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283

Query: 218 FWAESLY------GTLTAIMSREIDFKSDP-------------------------WPTIS 246
             A          G+    +S +    +D                             + 
Sbjct: 284 NVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALE 343

Query: 247 SS-AKDLIR--------------------------RMLIRDPNNQITVAQILKHPWL 276
              AK  IR                          RML+ +PN +IT+ + L HP+ 
Sbjct: 344 KEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFF 400

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 79.4 bits (196), Expect = 2e-16
 Identities = 43/214 (20%), Positives = 74/214 (34%), Gaps = 41/214 (19%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNA---LHA-----CHSNGIMHRDLKPENF 147
           ++ + G+L D +        ++   +  S V+    LH           I HRDLK +N 
Sbjct: 115 DYHENGSLYDYLKSTT-LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI 173

Query: 148 IFTTDDENATLKATDFGLAFFFEEGKVYEEV-----VGTPLYMAPELLGP------CKYG 196
           +     +N T    D GLA  F       ++     VGT  YM PE+L         +  
Sbjct: 174 LV---KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSY 230

Query: 197 KEIDIWSAGLILYNLLSG----------AQPFWAESLYGTLTAIMSREIDFKS------D 240
              D++S GLIL+ +               P+            M   +  K       +
Sbjct: 231 IMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPN 290

Query: 241 PWPT--ISSSAKDLIRRMLIRDPNNQITVAQILK 272
            W +         L+      +P +++T  ++ K
Sbjct: 291 RWSSDECLRQMGKLMTECWAHNPASRLTALRVKK 324

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202

 Score = 76.7 bits (189), Expect = 2e-16
 Identities = 27/180 (15%), Positives = 63/180 (35%), Gaps = 28/180 (15%)

Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
                 + +    F+ +D N  G L+  + +   +   + L +    + +++   DG+  
Sbjct: 22  GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGD----RIIESFFPDGSQR 77

Query: 376 ---------TLNLSLVQCKDTSLKDFNIFTKPSNI--LIRIMISIY-------ITADELE 417
                      +   V+ +DT  +D       ++    +     +Y       I+  E+ 
Sbjct: 78  VDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEML 137

Query: 418 AAFKE---YNMGDD---ATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGTSYRNLSH 471
              +      + ++         + E D D DG +S+ EF  +++     +  S R L H
Sbjct: 138 QVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQKMSIRILKH 197

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198

 Score = 76.7 bits (189), Expect = 2e-16
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 30/180 (16%)

Query: 314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTE-VDVKQYMQAADIDG 372
           VE L A E  +  + F  M    SG LT  EFK        + +    V+Q  +  D + 
Sbjct: 8   VEELSATECHQWYKKF--MTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNK 65

Query: 373 NGT--------TLNLSLVQCKDTSLKD-FNIFTKPSNILIRIMISIYITADELE----AA 419
           +G          L+L L    D  L+  F ++    N          I   EL     A 
Sbjct: 66  DGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGN--------GCIDRGELLNIIKAI 117

Query: 420 FKEYNMGDDATIKEI---MF-EVDRDKDGRISYEEFCATMKTGTHLRG--TSYRNLSHIF 473
                  +  T +E    +F ++D + DG +S EEF   ++    L    T   +L+HI 
Sbjct: 118 RAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRSLDLTHIV 177

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 73.2 bits (180), Expect = 2e-16
 Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 299 FRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTE 358
                   +  L     +   EE+ + +  F   D N SG L  +EF+A  ++L   +  
Sbjct: 3   HHHHHSSGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRP 60

Query: 359 VDVKQYMQAADIDGNGT 375
            D +   Q  D D +G 
Sbjct: 61  ADAEAVFQRLDADRDGA 77

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 78.5 bits (194), Expect = 3e-16
 Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 19/139 (13%)

Query: 96  EHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE 154
           E+  GGTL   I   +  Y      S  + + + +   HS  I+HRDL   N +     E
Sbjct: 87  EYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RE 143

Query: 155 NATLKATDFGLAFFFEEGKVYEE---------------VVGTPLYMAPELLGPCKYGKEI 199
           N  +   DFGLA    + K   E               VVG P +MAPE++    Y +++
Sbjct: 144 NKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKV 203

Query: 200 DIWSAGLILYNLLSGAQPF 218
           D++S G++L  ++      
Sbjct: 204 DVFSFGIVLCEIIGRVNAD 222

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 74.2 bits (183), Expect = 5e-16
 Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 29/155 (18%)

Query: 321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQA-ADIDGNGT---- 375
             + +K+ F   D    G +  D     L  +G   T   V+  + A + +    +    
Sbjct: 2   ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLD 61

Query: 376 ---TLNLSLVQCKDTSLKD--------FNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
               L     +  D + K         F +F K S           ++  +L        
Sbjct: 62  QITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTG--------KVSVGDLRYMLT--G 111

Query: 425 MGDDAT---IKEIMFEVDRDKDGRISYEEFCATMK 456
           +G+  T   + E++  V+ D +G I Y++F   + 
Sbjct: 112 LGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 146

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 44.9 bits (107), Expect = 7e-06
 Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 306 KKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYM 365
                         E+     + F+  D   +G ++  + +  L+ LG  LT+ +V + +
Sbjct: 69  VNEKELDATTKAKTEDF---VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELL 125

Query: 366 QAADIDGNGT 375
           +  ++D NG 
Sbjct: 126 KGVEVDSNGE 135

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 71.4 bits (176), Expect = 5e-16
 Identities = 17/50 (34%), Positives = 29/50 (58%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +  FK++D N  G ++Y+E KA +SK  +   E  ++   ++ D DGNG 
Sbjct: 3   EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGE 52

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 9/49 (18%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 410 YITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT 457
            ++ +E++A   +     ++  ++ I   +D D +G I   EF     +
Sbjct: 16  AVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 37.2 bits (87), Expect = 7e-04
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 431 IKEIMFEVDRDKDGRISYEEFCATMK 456
            + +  E+D + DG +SYEE  A + 
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAFVS 27

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score = 72.6 bits (179), Expect = 6e-16
 Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 17/112 (15%)

Query: 354 STLTEVDVKQYMQAADIDGN---GTTLNLSLVQCKDTS--LKDFNIFTKPSNILIRIMIS 408
           + L + DV   + A     +           +  K      K F +  +          S
Sbjct: 4   AGLKDADVAAALAACSAADSFKHKEFFAKVGLASKSLDDVKKAFYVIDQDK--------S 55

Query: 409 IYITADELEAAFKEYNMG----DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            +I  DEL+   + ++       DA  K  + + D+D DG I  +EF A +K
Sbjct: 56  GFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score = 41.8 bits (99), Expect = 4e-05
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKL---GSTLTEVDVKQYMQAADIDGNG 374
           K+ F  +D + SG +  DE K  L         LT+ + K ++   D DG+G
Sbjct: 44  KKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDG 95

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score = 72.6 bits (179), Expect = 7e-16
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 21/118 (17%)

Query: 352 LGSTLTEVDVKQYMQAADIDGNGT-------TLNLSLVQCKDTSLKDFNIFTKPSNILIR 404
           +   L   D+ + +        GT        L     +      + F I  K       
Sbjct: 2   MTKVLKADDINKAIS--AFKDPGTFDYKRFFHLVGLKGKTDAQVKEVFEILDKDQ----- 54

Query: 405 IMISIYITADELEAAFKEYNMG----DDATIKEIMFEVDRDKDGRISYEEFCATMKTG 458
              S +I  +EL+   K ++      +D   K ++   D D DG+I  +EF   +   
Sbjct: 55  ---SGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 326 KETFKQMDTNDSGTLTYDEFK---AGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           KE F+ +D + SG +  +E K    G S  G  L + + K  + A D D +G
Sbjct: 44  KEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDG 95

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 77.6 bits (191), Expect = 8e-16
 Identities = 36/167 (21%), Positives = 62/167 (37%), Gaps = 32/167 (19%)

Query: 75  LQF--ACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHAC 132
            +F    + ++   +  E  L  E+   G+L   +S        ++  +  SV   L   
Sbjct: 70  ARFIVGDERVTADGR-MEYLLVMEYYPNGSLXKYLS-LHTSDWVSSCRLAHSVTRGLAYL 127

Query: 133 HS---------NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE------ 177
           H+           I HRDL   N +      + T   +DFGL+      ++         
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLV---KNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184

Query: 178 ---VVGTPLYMAPELL-------GPCKYGKEIDIWSAGLILYNLLSG 214
               VGT  YMAPE+L             K++D+++ GLI + +   
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 77.4 bits (191), Expect = 8e-16
 Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 22/141 (15%)

Query: 96  EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN----------GIMHRDLKPE 145
              + G+L D +      +      +  ++   L   H +           I HRD+K +
Sbjct: 102 AFHEKGSLSDFLK-ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSK 160

Query: 146 NFIFTTDDENATLKATDFGLAFFFEEGKVYEE---VVGTPLYMAPELL-----GPCKYGK 197
           N +      N T    DFGLA  FE GK   +    VGT  YMAPE+L            
Sbjct: 161 NVL---LKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFL 217

Query: 198 EIDIWSAGLILYNLLSGAQPF 218
            ID+++ GL+L+ L S     
Sbjct: 218 RIDMYAMGLVLWELASRCTAA 238

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173

 Score = 73.6 bits (181), Expect = 1e-15
 Identities = 22/151 (14%), Positives = 53/151 (35%), Gaps = 28/151 (18%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD--------VKQYMQAADID 371
           EE+++ +  F Q+   D   ++  E    L+K+ +   ++          +  +   D D
Sbjct: 1   EEVRQFRRLFAQLAG-DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59

Query: 372 GNGT-------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
             G         L  ++ + +      +  F            S  I + EL  AF+   
Sbjct: 60  TTGKLGFEEFKYLWNNIKKWQAI----YKQFDVDR--------SGTIGSSELPGAFEAAG 107

Query: 425 MGDDATIKEIMFEVDRDKDGRISYEEFCATM 455
              +  +  ++     D+ G + ++ F + +
Sbjct: 108 FHLNEHLYSMIIRRYSDEGGNMDFDNFISCL 138

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 9/55 (16%)

Query: 411 ITADELEAAFK---------EYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           ++A EL              + +     T + ++  +D D  G++ +EEF     
Sbjct: 20  VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWN 74

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149

 Score = 72.9 bits (180), Expect = 1e-15
 Identities = 24/157 (15%), Positives = 46/157 (29%), Gaps = 26/157 (16%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADID--GNG 374
                    KE F   D      +T  +       LG   T  ++ + +     +     
Sbjct: 2   FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAA 61

Query: 375 T-------TLNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKE 422
                    +  +    KD    +       +F K  N          +   EL      
Sbjct: 62  AITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNG--------TVMGAELRHVLA- 112

Query: 423 YNMGDDATIKEI--MFEVDRDKDGRISYEEFCATMKT 457
             +G+  T +E+  + +   D +G I+YE F   + +
Sbjct: 113 -TLGEKMTEEEVEELMKGQEDSNGCINYEAFVKHIMS 148

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196

 Score = 73.9 bits (182), Expect = 2e-15
 Identities = 26/155 (16%), Positives = 58/155 (37%), Gaps = 28/155 (18%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT 376
               ++Q+ KE F+ +D +  G ++ ++ +A    LG   TE ++   +     +  G  
Sbjct: 51  FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVA----EAPGPI 106

Query: 377 -----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMG 426
                L +   +   T  +D     FN+F +                + L+ +      G
Sbjct: 107 NFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDG---------KCKEETLKRSLT--TWG 155

Query: 427 DDAT---IKEIMFEVDRDKDGRISYEEFCATMKTG 458
           +  +   + + + E   D +G I  ++F   +  G
Sbjct: 156 EKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKG 190

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score = 71.1 bits (175), Expect = 2e-15
 Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 23/119 (19%)

Query: 352 LGSTLTEVDVKQYMQAADIDGNGTTLN----LSLVQCKDTSLKD----FNIFTKPSNILI 403
               L   D+K+ + A   +G   + N     +LV  K  S  D    F      +    
Sbjct: 3   AKDLLKADDIKKALDAVKAEG---SFNHKKFFALVGLKAMSANDVKKVFKAIDADA---- 55

Query: 404 RIMISIYITADELEAAFKEYNMG----DDATIKEIMFEVDRDKDGRISYEEFCATMKTG 458
               S +I  +EL+   K +        DA  K  +   D+D DG+I  +EF   +   
Sbjct: 56  ----SGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 110

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 15/82 (18%)

Query: 297 KQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL---G 353
           K+F A+  LK ++         A ++   K+ FK +D + SG +  +E K  L      G
Sbjct: 28  KKFFALVGLKAMS---------ANDV---KKVFKAIDADASGFIEEEELKFVLKSFAADG 75

Query: 354 STLTEVDVKQYMQAADIDGNGT 375
             LT+ + K +++AAD DG+G 
Sbjct: 76  RDLTDAETKAFLKAADKDGDGK 97

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193

 Score = 73.3 bits (180), Expect = 3e-15
 Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 19/171 (11%)

Query: 303 SKLKKLALKVIVE--NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
           SKL+   ++ ++E  +    EIQ+  + F +     SG L+ +EFK              
Sbjct: 6   SKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCP--SGHLSMEEFKKIYGNFFPYGDASK 63

Query: 361 VKQY-MQAADIDGNGT--------TLNLSLVQCKDTSLK-DFNIFTKPSNILI-----RI 405
             ++  +  D +G+GT         L+++     +  LK  F+++    N  I       
Sbjct: 64  FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 123

Query: 406 MISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           ++              E     +   ++I  ++D ++DG++S EEF    K
Sbjct: 124 IVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 174

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 293 ISRVKQFRAMSKLKKLALKVIVENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSK 351
           IS+ +    +  + K+   V+         +K  ++ F+QMDTN  G L+ +EF  G   
Sbjct: 116 ISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 175

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 70.4 bits (173), Expect = 3e-15
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 4/90 (4%)

Query: 289 DTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAG 348
              I + +++ +     +          L      + K+ F+ +D + SG L  DE K  
Sbjct: 8   AEDIAAALQECQDPDTFEPQKF-FQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYF 66

Query: 349 LSKLGS---TLTEVDVKQYMQAADIDGNGT 375
           L K  S    LTE + K  M AAD DG+G 
Sbjct: 67  LQKFQSDARELTESETKSLMDAADNDGDGK 96

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 60.4 bits (147), Expect = 1e-11
 Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 50/147 (34%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEF--KAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           L AE+I    +  +  DT +       +F   +GLSK+    +   VK   +  D D +G
Sbjct: 6   LSAEDIAAALQECQDPDTFE-----PQKFFQTSGLSKM----SASQVKDIFRFIDNDQSG 56

Query: 375 TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG----DDAT 430
                                              Y+  DEL+   +++        ++ 
Sbjct: 57  -----------------------------------YLDGDELKYFLQKFQSDARELTESE 81

Query: 431 IKEIMFEVDRDKDGRISYEEFCATMKT 457
            K +M   D D DG+I  +EF   + +
Sbjct: 82  TKSLMDAADNDGDGKIGADEFQEMVHS 108

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 75.1 bits (185), Expect = 6e-15
 Identities = 44/219 (20%), Positives = 72/219 (32%), Gaps = 68/219 (31%)

Query: 123 RSVVNALHACHSNGIMHRDLKPENFIFTTDD----------------------ENATLKA 160
             ++ AL+      + H DLKPEN +                           ++  +K 
Sbjct: 144 IEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKL 203

Query: 161 TDFGLAFFFEEGKVYEEVVGTPLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFW 219
            DFG A F  +      ++ T  Y APE +L    +    D+WS G +L  L +G+  F 
Sbjct: 204 IDFGCATFKSD-YHGS-IINTRQYRAPEVILN-LGWDVSSDMWSFGCVLAELYTGSLLFR 260

Query: 220 AESLYGTLTAIM--------------SREIDFKSD-------PWPTISSSAK-------- 250
                  L  +               ++    K          WP  +SS          
Sbjct: 261 THEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKC 320

Query: 251 -------------DLIRRMLIRDPNNQITVAQILKHPWL 276
                        D +  +L  DP  + + A++LKH +L
Sbjct: 321 LPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107

 Score = 69.7 bits (171), Expect = 6e-15
 Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 3/84 (3%)

Query: 295 RVKQFRAMSKLKKLAL---KVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSK 351
           + +Q   + ++ K  L   K   +     +++  KE + + D N +G +     K  L K
Sbjct: 1   KAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK 60

Query: 352 LGSTLTEVDVKQYMQAADIDGNGT 375
           LG   T +++K+ +         T
Sbjct: 61  LGVPKTHLELKKLIGEVSSGSGET 84

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 5/50 (10%)

Query: 410 YITADELEAAFKEYNMGDDAT---IKEIMFEVDRDKDGRISYEEFCATMK 456
            I    L+   ++  +G   T   +K+++ EV        SY +F   M 
Sbjct: 48  DIDIMSLKRMLEK--LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMML 95

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 71.1 bits (174), Expect = 1e-14
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 27/166 (16%)

Query: 317 LPAEEIQKHKETFKQM-DTNDSGTLTYDEFKAGLSKLGST---------------LTEVD 360
           L   + QK K TF    D N  G++  ++F+  +++                     E +
Sbjct: 2   LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61

Query: 361 VKQYMQAADIDGNGT-TLN--LSLVQCKDTSLKDFNIFTKPSNILIRIMISI-------Y 410
            +     ADI+ +   +    L++ +    + K            I  +           
Sbjct: 62  WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121

Query: 411 ITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           +  +E +   K + +   A +  +   +            +     
Sbjct: 122 VDLEEFQNYCKNFQL-QCADVPAVYNVITDGGKVTFDLNRYKELYY 166

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 45.3 bits (107), Expect = 9e-06
 Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
            +LPA    +    FK MD +  G +  +EF+         L   DV          G  
Sbjct: 97  ADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKV 154

Query: 375 T 375
           T
Sbjct: 155 T 155

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 74.2 bits (182), Expect = 2e-14
 Identities = 48/262 (18%), Positives = 78/262 (29%), Gaps = 95/262 (36%)

Query: 108 SDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDD------------- 153
           S+ +         + + V+  L   H+   I+H D+KPEN + + ++             
Sbjct: 138 SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEW 197

Query: 154 ---------------------------------ENATLKATDFGLAFFFEEGKVYEEVVG 180
                                            E   +K  D G A +  +   + E + 
Sbjct: 198 QRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK--HFTEDIQ 255

Query: 181 TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLT-----AIM---- 231
           T  Y + E+L    Y    DIWS   + + L +G   F   S           A++    
Sbjct: 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELL 315

Query: 232 -------------SREIDFKSD----------PWPTISSSAK-------------DLIRR 255
                        S+E  F             PW       +             D +  
Sbjct: 316 GKVPRKLIVAGKYSKEF-FTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLP 374

Query: 256 MLIRDPNNQITVAQILKHPWLN 277
           ML   P  + T A+ L+HPWLN
Sbjct: 375 MLELIPEKRATAAECLRHPWLN 396

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256

 Score = 70.8 bits (173), Expect = 6e-14
 Identities = 38/245 (15%), Positives = 72/245 (29%), Gaps = 42/245 (17%)

Query: 235 IDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIIS 294
           +       P     +    R    R       + +     W+   +          + + 
Sbjct: 15  LLGDPGRIPLSKRESIKWQRPRFTRQA-----LMRCCLIKWI-LSSAAPQGSDSSDSELE 68

Query: 295 RVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS 354
                     L +L  +        +E+Q     FK      +G +  D FK   S+   
Sbjct: 69  LSTVRHQPEGLDQLQAQ---TKFTKKELQSLYRGFKNEC--PTGLVDEDTFKLIYSQFFP 123

Query: 355 TLTE-VDVKQYMQAADIDGNGTTLN----LSLVQCKDTSLKD-----FNIFTKPSNILIR 404
                        A D DGNG        + L      ++ +     FN++    +    
Sbjct: 124 QGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDG--- 180

Query: 405 IMISIYITADELEAAFK---------EYNMGDDATIKE----IMFEVDRDKDGRISYEEF 451
                 IT +E+ A  K          Y +  +    E       ++DR++DG ++ +EF
Sbjct: 181 -----CITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235

Query: 452 CATMK 456
             T +
Sbjct: 236 LETCQ 240

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 293 ISRVKQFRAMSKLKKLALKVIVENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSK 351
           I++ +    M  +  +  +     L  +   +H +  F++MD N  G +T DEF     K
Sbjct: 182 ITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK 241

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77

 Score = 65.6 bits (161), Expect = 9e-14
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           L  E+ Q+ KE F   DTN +G++ Y E K  +  LG  + + ++ + M   D +GNG 
Sbjct: 1   LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGY 59

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)

Query: 410 YITADELEAAFKEYNMGDDAT---IKEIMFEVDRDKDGRISYEEFCATM 455
            I   EL+ A +   +G D     I E+M E DR+ +G I +++F   M
Sbjct: 23  SIDYHELKVAMRA--LGFDVKKPEILELMNEYDREGNGYIGFDDFLDIM 69

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score = 66.4 bits (163), Expect = 2e-13
 Identities = 30/162 (18%), Positives = 53/162 (32%), Gaps = 29/162 (17%)

Query: 317 LPAEEIQKHKETFKQMD--TNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           L  +EI   K+ F+  D      G +   +       LG      DV   +      G  
Sbjct: 3   LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFA-VGGTHKMGEK 61

Query: 375 T-------TLNLSLVQCKDTSLKD----FNIFTKPSNILIRIMISIYITADELEAAFKEY 423
           +            L+ C+  +  D    F  F +            +I+  EL       
Sbjct: 62  SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQG--------FISGAELRHVLTA- 112

Query: 424 NMGDDAT---IKEIMFEVD--RDKDGRISYEEFCATMKTGTH 460
            +G+  +   + EI+   D   D +G + YE+F   +  G +
Sbjct: 113 -LGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPY 153

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 5/70 (7%)

Query: 308 LALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQA 367
               +  E     +     E FK  D    G ++  E +  L+ LG  L++ DV + ++ 
Sbjct: 72  YEGLMDCEQGTFADY---MEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL 128

Query: 368 ADI--DGNGT 375
            D+  D  G 
Sbjct: 129 TDLQEDLEGN 138

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146

 Score = 66.1 bits (162), Expect = 3e-13
 Identities = 22/148 (14%), Positives = 44/148 (29%), Gaps = 21/148 (14%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAAD--IDGNG 374
              E++ +        + +  G ++ D       KLG   + +D K+  +     +    
Sbjct: 9   QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDNLTYE- 67

Query: 375 TTLNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDA 429
             L    +   D    +     F  F              Y+T  +++        GD  
Sbjct: 68  QYLEYLSICVHDKDNVEELIKMFAHFDNNCTG--------YLTKSQMKNILT--TWGDAL 117

Query: 430 TIKEI--MFEVDRDKDGRISYEEFCATM 455
           T +E           +  I Y+ FC  +
Sbjct: 118 TDQEAIDALN-AFSSEDNIDYKLFCEDI 144

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score = 65.6 bits (161), Expect = 4e-13
 Identities = 20/152 (13%), Positives = 46/152 (30%), Gaps = 30/152 (19%)

Query: 319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT--- 375
           + +   +K+ F   D + +G +        L   G   T  ++ +     +         
Sbjct: 1   STDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDM 56

Query: 376 ----TLNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMISIYITADELEAAFKEYNMG 426
                +             +     F +F K +           I   EL       ++G
Sbjct: 57  EQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDAT--------GMIGVGELRYVLT--SLG 106

Query: 427 DDAT---IKEIMFEVDRDKDGRISYEEFCATM 455
           +  +   + E++  V    DG ++Y +F   +
Sbjct: 107 EKLSNEEMDELLKGVPVK-DGMVNYHDFVQMI 137

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score = 39.8 bits (94), Expect = 3e-04
 Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 3/48 (6%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKT 457
            I    +    +    G + T+ EI  E++      +  E+F   +  
Sbjct: 21  RIPKTSIGDLLR--ACGQNPTLAEIT-EIESTLPAEVDMEQFLQVLNR 65

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208

 Score = 64.8 bits (158), Expect = 3e-12
 Identities = 28/175 (16%), Positives = 61/175 (34%), Gaps = 40/175 (22%)

Query: 300 RAMSKLKKLALKVIVE--NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLT 357
           RA + L+   L+ I +       +I +    F  +D  ++GTL+ ++F+       + L 
Sbjct: 4   RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLG 63

Query: 358 EVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDF----NIFTKP----SNILIRIMISI 409
           +    + + A   +G               + + F      F        +  +     +
Sbjct: 64  D----RIINAFFSEGEDQV-----------NFRGFMRTLAHFRPIEDNEKSKDVNGPEPL 108

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGT 464
              +++L  AF+ Y               D DKD +IS +E    ++    +  +
Sbjct: 109 NSRSNKLHFAFRLY---------------DLDKDDKISRDELLQVLRMMVGVNIS 148

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 305 LKKLALKVIVENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSK 351
           L ++   ++  N+  E++      T ++ D +    +++ EF   L K
Sbjct: 135 LLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK 182

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78

 Score = 61.0 bits (149), Expect = 3e-12
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            I+  EL  A +         ++ +M E+D D DG I + EF +   
Sbjct: 19  KISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCN 65

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           A+++   +  FK+ DTN  G ++  E    L  LGST  + +V++ M   D DG+G 
Sbjct: 2   ADDM---ERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGF 54

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86

 Score = 60.0 bits (146), Expect = 8e-12
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           +      ++I   +  FK+ DTN  G ++  E    L  LGS +T  +V++ M   D DG
Sbjct: 1   MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDG 59

Query: 373 NGT 375
           +G 
Sbjct: 60  DGF 62

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86

 Score = 58.0 bits (141), Expect = 4e-11
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTG 458
            I++ EL  A K         ++ +M E+D D DG IS++EF    +  
Sbjct: 27  KISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71

 Score = 59.4 bits (145), Expect = 9e-12
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 410 YITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           +IT DEL  A            +  ++ E D D+DGR++YEEF   + 
Sbjct: 22  HITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71

 Score = 46.7 bits (112), Expect = 3e-07
 Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 319 AEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           A    +  +  F+  D +  G +T DE +  ++ LG  L + ++   ++ AD+D +G 
Sbjct: 1   ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGR 58

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135

 Score = 61.6 bits (150), Expect = 9e-12
 Identities = 19/111 (17%), Positives = 31/111 (27%), Gaps = 20/111 (18%)

Query: 358 EVDVKQYMQAADIDGNGTT-----LNLSLVQCKDTSLKD-----FNIFTKPSNILIRIMI 407
           E   K  +          T     L +   +             F++   P         
Sbjct: 2   EPTEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERH------ 55

Query: 408 SIYITADELEAAFKEYNMGD--DATIKEIMFEVDRDKDGRISYEEFCATMK 456
              ITA+ L        +        + ++ E D D DG ++  EFC  M 
Sbjct: 56  --LITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMV 104

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 10/59 (16%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS-TLTEVDVKQYMQAADIDGNGT 375
              E+    + F  +   +   +T +  +     LG   +++ D +  ++  D+DG+G 
Sbjct: 38  FVSEL---CKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGA 93

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81

 Score = 59.1 bits (144), Expect = 2e-11
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 410 YITADELEAAFKE--YNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTH 460
            I  DE +   ++       DA ++E M E D D +G I   EF   +K   +
Sbjct: 24  VIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSKN 76

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG-STLTEVDVKQYMQAADIDGNGT 375
           +  ++ ++    FK  D N  G + +DEFK  + K+G   LT+ +V++ M+ AD DGNG 
Sbjct: 2   VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 59.4 bits (144), Expect = 3e-11
 Identities = 10/67 (14%), Positives = 25/67 (37%)

Query: 309 ALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAA 368
            +   +            + F+  DT  + T++ +EF+A  ++    LT+    +     
Sbjct: 10  DILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEM 69

Query: 369 DIDGNGT 375
            ++  G 
Sbjct: 70  PVNAKGR 76

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 52.5 bits (126), Expect = 6e-09
 Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 410 YITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
            I+ +E  A          D     +  E+  +  GR+ Y +F +   + T
Sbjct: 40  TISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSET 90

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67

 Score = 57.9 bits (141), Expect = 3e-11
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           K  F++ D N  G L+ DEF+          T+ D+ ++ +  D+DGNG 
Sbjct: 4   KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGE 53

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 5/50 (10%)

Query: 410 YITADELEAAFKEYNMGDDAT---IKEIMFEVDRDKDGRISYEEFCATMK 456
            ++ DE              T   I +   E+D D +G ++ +EF + ++
Sbjct: 17  KLSLDEFREVALA--FSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150

 Score = 59.9 bits (145), Expect = 5e-11
 Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 3/86 (3%)

Query: 293 ISRVKQFRAMSKLKKLAL---KVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGL 349
           I + +Q R ++++ +  L   K   E    E++   KE + + D N+ G +     K  +
Sbjct: 17  ILKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMM 76

Query: 350 SKLGSTLTEVDVKQYMQAADIDGNGT 375
            KLG   T +++K+ +       + T
Sbjct: 77  EKLGVPKTHLEMKKMISEVTGGVSDT 102

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150

 Score = 50.6 bits (121), Expect = 7e-08
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 5/50 (10%)

Query: 410 YITADELEAAFKEYNMGDDAT---IKEIMFEVDRDKDGRISYEEFCATMK 456
            I    L+   ++  +G   T   +K+++ EV       ISY +F   M 
Sbjct: 66  EIDLMSLKRMMEK--LGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMML 113

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90

 Score = 58.0 bits (141), Expect = 6e-11
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 301 AMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
           +M+  +  A       L  E I + K  F   D +  G ++  E    +  LG   T+ +
Sbjct: 2   SMTDQQAEARA----FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE 57

Query: 361 VKQYMQAADIDGNGT 375
           +   ++  D DG+GT
Sbjct: 58  LDAIIEEVDEDGSGT 72

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 410 YITADELEAAFKEYNMGDDAT---IKEIMFEVDRDKDGRISYEEFCATM 455
            I+  EL    +   +G + T   +  I+ EVD D  G I +EEF   M
Sbjct: 36  DISTKELGTVMRM--LGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224

 Score = 60.8 bits (147), Expect = 1e-10
 Identities = 32/195 (16%), Positives = 64/195 (32%), Gaps = 31/195 (15%)

Query: 284 WDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYD 343
             RP    I   ++      + + L       N    E+Q     FK      SG +  +
Sbjct: 15  QRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECP--SGVVNEE 72

Query: 344 EFKAGLSKLGSTLTEVDVKQYM-QAADIDGNGTTLNLSLVQCKDTSLKDFNIFTK-PSNI 401
            FK   ++            Y+  A D    G+      V          +I  +   + 
Sbjct: 73  TFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTA-------LSILLRGTVHE 125

Query: 402 LIRIMISIY-------ITADELEAAFK---------EYNMGDDATIKE----IMFEVDRD 441
            +R   ++Y       I  +E+    K          Y +  + T ++       ++D++
Sbjct: 126 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 185

Query: 442 KDGRISYEEFCATMK 456
           KDG ++ +EF  + +
Sbjct: 186 KDGIVTLDEFLESCQ 200

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 293 ISRVKQFRAMSKLKKLALKVIVENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSK 351
           I++ +    +  +  +  K     L  +  ++H    F++MD N  G +T DEF     +
Sbjct: 142 INKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 201

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147

 Score = 58.4 bits (141), Expect = 1e-10
 Identities = 12/61 (19%), Positives = 26/61 (42%)

Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           +     +++  K  + + D N +G +     K  L KLG   T +++K+ ++        
Sbjct: 40  DEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEE 99

Query: 375 T 375
           T
Sbjct: 100 T 100

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147

 Score = 55.3 bits (133), Expect = 2e-09
 Identities = 14/135 (10%), Positives = 36/135 (26%), Gaps = 45/135 (33%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQA---ADIDGNGTTLNLSLV 382
            +  ++++  +   L   ++               ++ +       D++GNG        
Sbjct: 18  AQQEERLEGINKQFLDDPKYSN------DEDLPSKLEAFKVKYMEFDLNGNG-------- 63

Query: 383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRD 441
                                       I    L+   ++  +      +K ++ EV   
Sbjct: 64  ---------------------------DIDIMSLKRMLEKLGVPKTHLELKRLIREVSSG 96

Query: 442 KDGRISYEEFCATMK 456
            +   SY +F   M 
Sbjct: 97  SEETFSYSDFLRMML 111

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190

 Score = 59.5 bits (144), Expect = 1e-10
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 33/178 (18%)

Query: 303 SKLKKLALKVIVE--NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
           SKL K  L  + +       EIQ+  + F +     SG L  ++F     +     +  D
Sbjct: 6   SKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDC--PSGQLAREDFVKIYKQFFPFGSPED 63

Query: 361 VKQYM-QAADIDGNGTTLNLSLVQCKDTSLKDFNIFTK-PSNILIRIMISIY-------I 411
              ++    D D NG       +          +  ++      +     +Y       I
Sbjct: 64  FANHLFTVFDKDNNGFIHFEEFITV-------LSTTSRGTLEEKLSWAFELYDLNHDGYI 116

Query: 412 TADELE----AAFKEYNMGDDATIKE---------IMFEVDRDKDGRISYEEFCATMK 456
           T DE+     + +K           E         I   +D+++DG I+ +EF    K
Sbjct: 117 TFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK 174

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 293 ISRVKQFRAMSKLKKLALKVIVENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSK 351
           I+  +    ++ + K+   ++  N      +   K+ FK MD N+ G +T DEF+ G   
Sbjct: 116 ITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92

 Score = 55.7 bits (135), Expect = 3e-10
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 410 YITADELEAAFKEYNMGDDAT---IKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGT 464
           YI+A EL        +G+  T   +++++ E D D DG+++YEEF   M T     G 
Sbjct: 25  YISASELRHVMIN--LGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGG 80

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92

 Score = 46.4 bits (111), Expect = 5e-07
 Identities = 18/60 (30%), Positives = 36/60 (60%)

Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           ++  +  ++ KE FK  D + +G ++  E +  +  LG  LT+ +V+Q ++ AD+DG+G 
Sbjct: 2   HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83

 Score = 54.2 bits (131), Expect = 9e-10
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 410 YITADELEAAFK----EYNMGDDAT---IKEIMFEVDRDKDGRISYEEFCATMK 456
           Y+TA EL+           +  D       +++   D++ DG+IS EEF     
Sbjct: 23  YVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANA 76

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83

 Score = 39.9 bits (94), Expect = 9e-05
 Identities = 11/65 (16%), Positives = 27/65 (41%), Gaps = 6/65 (9%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTL------TEVDVKQYMQAADI 370
           +  +   + +  FK++D N  G +T  E +  +  L +         +    + ++ AD 
Sbjct: 1   MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60

Query: 371 DGNGT 375
           + +G 
Sbjct: 61  NSDGK 65

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190

 Score = 56.4 bits (136), Expect = 2e-09
 Identities = 26/171 (15%), Positives = 57/171 (33%), Gaps = 19/171 (11%)

Query: 303 SKLKKLALKVIVE--NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTE-V 359
           SKLK   ++ +        +E+Q+  + F +     SG L    F+    +         
Sbjct: 6   SKLKPEVVEELTRKTYFTEKEVQQWYKGFIKDC--PSGQLDAAGFQKIYKQFFPFGDPTK 63

Query: 360 DVKQYMQAADIDGNGT--------TLNLSLVQCKDTSLKD-FNIFTKPSNILI-----RI 405
                    D + +G          L+++     D  L+  F ++   ++  I       
Sbjct: 64  FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLD 123

Query: 406 MISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           ++              E     +  +  I   +D++ DG+++ +EF    K
Sbjct: 124 IVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK 174

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 293 ISRVKQFRAMSKLKKLALKVIVENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSK 351
           I+R +    +  + ++    +         +K     F  MD N  G LT  EF+ G   
Sbjct: 116 ITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 175

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207

 Score = 56.5 bits (136), Expect = 2e-09
 Identities = 25/173 (14%), Positives = 61/173 (35%), Gaps = 21/173 (12%)

Query: 303 SKLKKLALKVIVE--NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
             L K  L+ +        EE+    ++F       +G +T  +F++  +K         
Sbjct: 14  GALSKEILEELQLNTKFSEEELCSWYQSFL--KDCPTGRITQQQFQSIYAKFFPDTDPKA 71

Query: 361 VKQYM-QAADIDGNGT----TLNLSLVQCKDTSLKD-----FNIFTKPSNILIR--IMIS 408
             Q++ ++ D + +GT       ++L               F+++    N  I    ++ 
Sbjct: 72  YAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 131

Query: 409 IYITADELEAAFKEYNMGDDAT-----IKEIMFEVDRDKDGRISYEEFCATMK 456
           I +   ++        + DD        ++I     ++ D +++ +EF     
Sbjct: 132 IVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTL 184

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143

 Score = 55.0 bits (132), Expect = 2e-09
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 23/115 (20%)

Query: 343 DEFKAGLSKLGSTLTEVDVK-QYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNI 401
           +  +  ++K  + ++  +++  Y +  D DGN     L L        K+      P   
Sbjct: 51  EHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAP--- 107

Query: 402 LIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
                    ++ DEL              I  ++ + D++ DG I Y EF  +++
Sbjct: 108 --------LMSEDELIN-----------IIDGVLRDDDKNNDGYIDYAEFAKSLQ 143

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76

 Score = 51.8 bits (125), Expect = 5e-09
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 410 YITADELEAAFK---EYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT 459
            I+ +EL+   +      +   +T+ E++ EVD++ DG +S+EEF   MK  +
Sbjct: 23  QISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKIS 75

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 7/60 (11%)

Query: 320 EEIQKHKETFKQMDTND--SGTLTYDEFKAGLSKLGSTLT--EVDVKQYMQAADIDGNGT 375
           EEI   K  F+     +     ++ +E K  +  LG +L      + + ++  D +G+G 
Sbjct: 5   EEI---KGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 51.9 bits (125), Expect = 9e-09
 Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 40/117 (34%)

Query: 342 YDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNI 401
             E     S +  T +E ++++  +  D DGNG                           
Sbjct: 12  SGENLYFQSLMKDTDSEEEIREAFRVEDKDGNG--------------------------- 44

Query: 402 LIRIMISIYITADELEAAFKEYNMGDDAT---IKEIMFEVDRDKDGRISYEEFCATM 455
                   YI+A EL       N+G+  T   + E++ E D D DG+++YEEF   M
Sbjct: 45  --------YISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 91

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 46.9 bits (112), Expect = 4e-07
 Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           + +    EEI   +E F+  D + +G ++  E +  ++ LG  LT+ +V + ++ ADIDG
Sbjct: 22  MKDTDSEEEI---REAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 78

Query: 373 NGT 375
           +G 
Sbjct: 79  DGQ 81

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 52.4 bits (126), Expect = 2e-08
 Identities = 23/143 (16%), Positives = 42/143 (29%), Gaps = 28/143 (19%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD-----VKQYMQAADIDGNGT----- 375
              F  +     G +  DE +  L++ G             +  +   D D +GT     
Sbjct: 5   YGYFASV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNE 63

Query: 376 --TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIK 432
              L   L   +      F  F            S  +   EL+ A        +  T+ 
Sbjct: 64  FKELWAVLNGWRQH----FISFDSDR--------SGTVDPQELQKALTTMGFRLNPQTVN 111

Query: 433 EIMFEVDRDKDGRISYEEFCATM 455
            I         G+I+++++ A  
Sbjct: 112 SIAKRYST--SGKITFDDYIACC 132

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 42.4 bits (100), Expect = 6e-05
 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 6/58 (10%)

Query: 411 ITADELEAAFKEYNMGDD------ATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLR 462
           I ADEL+    +  +          T + ++  +DRD  G + + EF          R
Sbjct: 18  IDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWR 75

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 42.4 bits (100), Expect = 7e-05
 Identities = 21/137 (15%), Positives = 41/137 (29%), Gaps = 45/137 (32%)

Query: 322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL 381
           +   ++ F   D++ SGT+   E +  L+ +G  L    V    +     G         
Sbjct: 71  LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKI------- 123

Query: 382 VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRD 441
                     F+ +       I   + +      L  +F+                 D  
Sbjct: 124 ---------TFDDY-------IACCVKL----RALTDSFRRR---------------DSA 148

Query: 442 KDGRI--SYEEF-CATM 455
           + G +  SY++F    M
Sbjct: 149 QQGMVNFSYDDFIQCVM 165

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 54.6 bits (131), Expect = 3e-08
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 7/88 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N + +   E   +K  DFGLA    +   Y       L   +MAPE +
Sbjct: 211 SRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 267

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQP 217
               Y  + D+WS G++L+ + S GA P
Sbjct: 268 FDRVYTIQSDVWSFGVLLWEIFSLGASP 295

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 54.1 bits (131), Expect = 3e-08
 Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 27/119 (22%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPE- 188
           H N  +HRD+K  N I   +   A  K +DFGLA   E+     +   +VGT  YMAPE 
Sbjct: 150 HENHHIHRDIKSAN-ILLDEAFTA--KISDFGLARASEKFAQTVMTSRIVGTTAYMAPEA 206

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLSG----------------AQPFWAESLYGTLTAIM 231
           L G  +   + DI+S G++L  +++G                 +    E    T+   +
Sbjct: 207 LRG--EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEE--KTIEDYI 261

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183

 Score = 52.5 bits (126), Expect = 3e-08
 Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 22/128 (17%)

Query: 329 FKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTS 388
           F   DT  +G++ +++F   LS L        ++      DI+ +G             +
Sbjct: 62  FNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYI-----------N 110

Query: 389 LKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISY 448
            ++     K    ++       +  D                +     ++D++KDG ++ 
Sbjct: 111 KEEMMDIVKAIYDMMGKYTYPVLKEDTPRQ-----------HVDVFFQKMDKNKDGIVTL 159

Query: 449 EEFCATMK 456
           +EF  + +
Sbjct: 160 DEFLESXQ 167

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 293 ISRVKQFRAMSKLKKLALKVIVENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSK 351
           I++ +    +  +  +  K     L  +  ++H    F++MD N  G +T DEF     +
Sbjct: 109 INKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQE 168

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 10/59 (16%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +  E+ + +   F+ +  + S  ++    K   +K  S L+  ++    + +D D +G 
Sbjct: 16  ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK--SKLSIPELSYIWELSDADCDGA 72

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           +I+    +  F +  +     +  I    D D DG ++  EFCA   
Sbjct: 38  FISGSVAKNFFTKSKL-SIPELSYIWELSDADCDGALTLPEFCAAFH 83

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +   E  K+ E F + D +  G ++  E +    K G  L    +       D    G 
Sbjct: 4   VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGK 60

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 7/47 (14%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           +++  E+   F +  +     +  I    D    G++S ++F     
Sbjct: 26  FVSGLEVREIFLKTGL-PSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 9/68 (13%)

Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV---YEE----- 177
           ++AL   H N  +H ++  EN     +D++  +    +G AF +        Y E     
Sbjct: 169 LDALEFLHENEYVHGNVTAENIFVDPEDQS-QVTLAGYGFAFRYCPSGKHVAYVEGSRSP 227

Query: 178 VVGTPLYM 185
             G   ++
Sbjct: 228 HEGDLEFI 235

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 50.5 bits (121), Expect = 5e-07
 Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 9/68 (13%)

Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV------- 178
           ++ L   H +  +H D+K  N +    + +  +   D+GLA+ +    V++         
Sbjct: 162 LDILEYIHEHEYVHGDIKASNLLLNYKNPD-QVYLVDYGLAYRYCPEGVHKAYAADPKRC 220

Query: 179 -VGTPLYM 185
             GT  + 
Sbjct: 221 HDGTIEFT 228

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 50.6 bits (121), Expect = 6e-07
 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
               +HRDL+  N +     EN   K  DFGLA   E+ + Y    G      + APE  
Sbjct: 381 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAA 436

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
              ++  + D+WS G++L  L + G  P+        L  +  
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92

 Score = 46.3 bits (110), Expect = 7e-07
 Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +  E+ Q +   FK +  + +G +     K   +K  S L  +++    + +D D +G 
Sbjct: 3   ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK--SKLPILELSHIWELSDFDKDGA 59

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           +I     +  F +  +     +  I    D DKDG ++ +EFCA   
Sbjct: 25  FIPGSAAKEFFTKSKL-PILELSHIWELSDFDKDGALTLDEFCAAFH 70

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 50.5 bits (121), Expect = 8e-07
 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
               +HRDL+  N +     EN   K  DFGLA   E+ + Y    G      + APE  
Sbjct: 298 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAA 353

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
              ++  + D+WS G++L  L + G  P+        L  +  
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 49.5 bits (119), Expect = 8e-07
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 8/103 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N +    ++   +K +DFGL+ +  +   Y   VG+     +  PE+L
Sbjct: 138 SKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVL 193

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
              K+  + DIW+ G++++ + S G  P+   +   T   I  
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 236

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 49.7 bits (119), Expect = 1e-06
 Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 9/68 (13%)

Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV------- 178
           ++ L   H N  +H D+K  N +    + +  +   D+GL++ +     +++        
Sbjct: 161 LDVLEYIHENEYVHGDIKAANLLLGYKNPD-QVYLADYGLSYRYCPNGNHKQYQENPRKG 219

Query: 179 -VGTPLYM 185
             GT  + 
Sbjct: 220 HNGTIEFT 227

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
              ++HRDL   N +     EN  +K +DFG+  F  +   Y    GT     + +PE+ 
Sbjct: 122 EACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVF 177

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAI 230
              +Y  + D+WS G++++ + S G  P+   S    +  I
Sbjct: 178 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 7/93 (7%)

Query: 129 LH-ACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVGTPLYM 185
           LH  C    I+HRD+K  N +    DE       DFGLA   +     V   V GT  ++
Sbjct: 147 LHDHCDPK-IIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 202

Query: 186 APELLGPCKYGKEIDIWSAGLILYNLLSGAQPF 218
           APE L   K  ++ D++  G++L  L++G + F
Sbjct: 203 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           ++T  +      + ++   A +  I    D D+DG+++ EEF   M 
Sbjct: 30  HLTGPQARTILMQSSL-PQAQLASIWNLSDIDQDGKLTAEEFILAMH 75

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +P     K+++ F   D   SG LT  + +  L +  S+L +  +      +DID +G 
Sbjct: 8   VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ--SSLPQAQLASIWNLSDIDQDGK 64

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 8/104 (7%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPEL 189
                +HR+L   N +     EN  +K  DFGL+        Y    G      + APE 
Sbjct: 335 EKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPES 390

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
           L   K+  + D+W+ G++L+ + + G  P+    L      +  
Sbjct: 391 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 434

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 4/93 (4%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
            N  +HRD+   N + T        K  DFG+A        Y +     L   +M PE  
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 217

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAES 222
               +  + D WS G++L+ + S G  P+ ++S
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 250

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 8/103 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S+  +HRDL   N +    D +  +K +DFG+  +  +   Y   VGT     + APE+ 
Sbjct: 122 SHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVLDD-QYVSSVGTKFPVKWSAPEVF 177

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
              KY  + D+W+ G++++ + S G  P+   +    +  +  
Sbjct: 178 HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ 220

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 4/93 (4%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
            N  +HRD+   N + T        K  DFG+A        Y +     L   +M PE  
Sbjct: 199 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF 258

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAES 222
               +  + D WS G++L+ + S G  P+ ++S
Sbjct: 259 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 291

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 7/88 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N +          K  DFGLA   +    Y       L   +MAPE +
Sbjct: 163 SKNCIHRDLAARNIL---LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 219

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQP 217
             C Y  E D+WS G+ L+ L S G+ P
Sbjct: 220 FNCVYTFESDVWSYGIFLWELFSLGSSP 247

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 9/105 (8%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLY----MAPE 188
            S   +HRDL   N + T   E   LK +DFG++    +G VY    G         APE
Sbjct: 230 ESKCCIHRDLAARNCLVT---EKNVLKISDFGMSREEADG-VYAASGGLRQVPVKWTAPE 285

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
            L   +Y  E D+WS G++L+   S GA P+   S   T   +  
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK 330

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
               +HRDL+  N +     +  + K  DFGLA   E+   Y    G      + APE +
Sbjct: 127 ERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAI 182

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
               +  + D+WS G++L  +++ G  P+   +    +  +  
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 47.7 bits (114), Expect = 4e-06
 Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 23/110 (20%)

Query: 125 VVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-----YEE-- 177
           +++ +   HS   +HRD+KP+NF+     +   +   DFGLA  + + +      Y E  
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENK 173

Query: 178 -VVGTPLYM---APELLGPCKYGKEI----DIWSAGLILYNLLSGAQPFW 219
            + GT  Y              G E     D+ S G +L     G+ P W
Sbjct: 174 NLTGTARYASINTHL-------GIEQSRRDDLESLGYVLMYFNLGSLP-W 215

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 47.2 bits (113), Expect = 4e-06
 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 8/103 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
               +HRDL   N +     EN  +K  DFGL+        Y    G      + APE L
Sbjct: 129 KKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESL 184

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
              K+  + D+W+ G++L+ + + G  P+    L      +  
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863

 Score = 48.4 bits (114), Expect = 4e-06
 Identities = 21/107 (19%), Positives = 44/107 (41%), Gaps = 18/107 (16%)

Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
            +  E++ + + +F   D   +G +  ++F+A L  +G  + E +  + M   D +  G 
Sbjct: 718 GISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGV 777

Query: 376 TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE 422
                       + + F  F      + R   +   TAD++ A+FK 
Sbjct: 778 -----------VTFQAFIDF------MSRET-ADTDTADQVMASFKI 806

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 47.6 bits (114), Expect = 5e-06
 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 6/63 (9%)

Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGK--VYEEVVGTPLYM 185
           LH  H+  I+HRD+K  N +    DEN   K TDFG++    E  +  +   V GT  Y+
Sbjct: 152 LHYLHTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYI 208

Query: 186 APE 188
            PE
Sbjct: 209 DPE 211

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 47.7 bits (113), Expect = 5e-06
 Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 23/109 (21%)

Query: 126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-----YEE--- 177
           +N +   HS   +HRD+KP+NF+         +   DFGLA  + +        Y E   
Sbjct: 113 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKN 172

Query: 178 VVGTPLYM---APELLGPCKYGKEI----DIWSAGLILYNLLSGAQPFW 219
           + GT  Y              G E     D+ S G +L   L G+ P W
Sbjct: 173 LTGTARYASVNTHL-------GIEQSRRDDLESLGYVLMYFLRGSLP-W 213

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 47.4 bits (113), Expect = 6e-06
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 8/103 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
               +HRDL+  N +      +   K  DFGLA   E+ + Y    G      + APE +
Sbjct: 302 QRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI 357

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
               +  + D+WS G++L  +++ G  P+   S    + A+  
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 400

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 45.4 bits (108), Expect = 7e-06
 Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 45/137 (32%)

Query: 322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL 381
           +   KE F  +D + SGT+ + E +  +  +G  L+   +   ++    +G         
Sbjct: 69  LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR-------- 120

Query: 382 VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRD 441
                     F+ +       +   + +      L   F++                D  
Sbjct: 121 --------IFFDDY-------VACCVKL----RALTDFFRKR---------------DHL 146

Query: 442 KDGRI--SYEEF-CATM 455
           + G     Y++F   TM
Sbjct: 147 QQGSANFIYDDFLQGTM 163

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 6/58 (10%)

Query: 411 ITADELEAAFKEYNMGD------DATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLR 462
           + A+EL+    +  +          T + ++  +DRD  G++ +  F          +
Sbjct: 16  VDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWK 73

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121

 Score = 44.1 bits (104), Expect = 9e-06
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           +IT D+    F +  +     + +I    D + DGR+   EF   MK
Sbjct: 48  FITGDQARNFFFQSGL-PQPVLAQIWALADMNNDGRMDQVEFSIAMK 93

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121

 Score = 41.8 bits (98), Expect = 5e-05
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +  EE  KH + F  +     G +T D+ +    +  S L +  + Q    AD++ +G 
Sbjct: 27  ITVEERAKHDQQFHSLKPIS-GFITGDQARNFFFQ--SGLPQPVLAQIWALADMNNDGR 82

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 47.2 bits (112), Expect = 1e-05
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG-TPL-YMAPELLGPCKYG 196
           HRD+   N + +    N  +K  DFGL+ + E+   Y+   G  P+ +MAPE +   ++ 
Sbjct: 514 HRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570

Query: 197 KEIDIWSAGLILYNLLS-GAQPFW 219
              D+W  G+ ++ +L  G +PF 
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQ 594

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 7/88 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRD+   N + T        K  DFGLA        Y       L   +MAPE +
Sbjct: 182 SKNCIHRDVAARNVLLT---NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 238

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQP 217
             C Y  + D+WS G++L+ + S G  P
Sbjct: 239 FDCVYTVQSDVWSYGILLWEIFSLGLNP 266

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 7/90 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT--PL-YMAPELL 190
              ++HRDL   N +  T      +K TDFGLA      +      G   P+ +MA E +
Sbjct: 135 DRRLVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
               Y  + D+WS G+ ++ L++ G++P+ 
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
            +G++HR+L   N +       + ++  DFG+A                    +MA E +
Sbjct: 133 EHGMVHRNLAARNVLL---KSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
              KY  + D+WS G+ ++ L++ GA+P+ 
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMTFGAEPYA 219

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 7/88 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
               +HRDL   N +         +K  DFGLA        Y       L   +MAPE L
Sbjct: 190 FKSCVHRDLAARNVL---VTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL 246

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQP 217
               Y  + D+WS G++L+ + S G  P
Sbjct: 247 FEGIYTIKSDVWSYGILLWEIFSLGVNP 274

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 21/137 (15%), Positives = 42/137 (30%), Gaps = 45/137 (32%)

Query: 322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL 381
           +   ++ F   DT+ SGT+   E +  L+ +G  L+   V    +    +G         
Sbjct: 102 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK-------- 153

Query: 382 VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRD 441
                     F+ +       I   + +      L  +F+                 D  
Sbjct: 154 --------ITFDDY-------IACCVKL----RALTDSFRRR---------------DTA 179

Query: 442 KDGRI--SYEEF-CATM 455
           + G +   Y++F    M
Sbjct: 180 QQGVVNFPYDDFIQCVM 196

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 6/58 (10%)

Query: 411 ITADELEAAFKEYNMG------DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLR 462
           I ADEL+    +  +       +  T + ++  +DRD  G + + EF          R
Sbjct: 49  IDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWR 106

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 12/103 (11%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
            N  +HRDL   N +     E+   K +DFGL       +         L   + APE L
Sbjct: 135 GNNFVHRDLAARNVLV---SEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEAL 186

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
              K+  + D+WS G++L+ + S G  P+    L   +  +  
Sbjct: 187 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 229

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 19/108 (17%)

Query: 126 VNALHACHSNGIMHRDLKPENF-IFTTDDENA-TLKATDFGLAFFFEEGKV-----YEE- 177
           +  + + H   +++RD+KP+NF I   + +NA  +   DFG+  F+ +        Y E 
Sbjct: 116 LARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREK 175

Query: 178 --VVGTPLYMAPELLGPCKYGKEI----DIWSAGLILYNLLSGAQPFW 219
             + GT  YM+         G+E     D+ + G +    L G+ P W
Sbjct: 176 KNLSGTARYMSINTH----LGREQSRRDDLEALGHVFMYFLRGSLP-W 218

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N +     E+ T+   DFGL+     G  Y +   + L   ++A E L
Sbjct: 155 SRNFIHRDLAARNCML---AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESL 211

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
               Y    D+W+ G+ ++ +++ G  P+ 
Sbjct: 212 ADNLYTVHSDVWAFGVTMWEIMTRGQTPYA 241

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
              ++HRDL   N +         +K TDFGLA      +      G  +   +MA E +
Sbjct: 135 DRRLVHRDLAARNVLVK---TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
               Y  + D+WS G+ ++ L++ G++P+ 
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 7/90 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           +   +HRDL   N +     ++ T+   DFGL+     G  Y +     +   ++A E L
Sbjct: 165 NRNFLHRDLAARNCML---RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 221

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
               Y  + D+W+ G+ ++ + + G  P+ 
Sbjct: 222 ADRVYTSKSDVWAFGVTMWEIATRGMTPYP 251

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 44.1 bits (105), Expect = 5e-05
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT-PL-YMAPELLG 191
           S   +HRD+   N + +    N  +K  DFGL+ + E+   Y+   G  P+ +MAPE + 
Sbjct: 134 SKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 190

Query: 192 PCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
             ++    D+W  G+ ++ +L  G +PF 
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKPFQ 219

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 9/105 (8%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT----PL-YMAPE 188
               +HRDL   N +    DE+ T+K  DFGLA    + + Y          P+ + A E
Sbjct: 142 EQKFVHRDLAARNCML---DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
            L   ++  + D+WS G++L+ LL+ GA P+     +     +  
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ 243

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99

 Score = 41.3 bits (97), Expect = 5e-05
 Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
              +     +++ ++Q++  ++G +   +  A L K  S L ++ + +    AD DG G 
Sbjct: 4   TQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK--SGLPDLILGKIWDLADTDGKGV 61

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99

 Score = 40.6 bits (95), Expect = 8e-05
 Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            + A +  A  K+  +  D  + +I    D D  G +S +EF   ++
Sbjct: 27  RVLALDAAAFLKKSGL-PDLILGKIWDLADTDGKGVLSKQEFFVALR 72

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 43.7 bits (104), Expect = 6e-05
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S+ ++H+DL   N +     +   +K +D GL         Y+ +  + L   +MAPE +
Sbjct: 146 SHHVVHKDLATRNVLVY---DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAI 202

Query: 191 GPCKYGK---EIDIWSAGLILYNLLS-GAQPFWAES 222
               YGK   + DIWS G++L+ + S G QP+   S
Sbjct: 203 ---MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 235

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106

 Score = 40.9 bits (96), Expect = 7e-05
 Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           +++ D+++       +     +  +    D D DG +  +EF   M 
Sbjct: 30  FLSGDKVKPVLLNSKL-PVDILGRVWELSDIDHDGMLDRDEFAVAMF 75

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 43.9 bits (104), Expect = 7e-05
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
            N  +HRDL   N + +   E+   K +DFGL       +         L   + APE L
Sbjct: 307 GNNFVHRDLAARNVLVS---EDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEAL 358

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
              K+  + D+WS G++L+ + S G  P+ 
Sbjct: 359 REKKFSTKSDVWSFGILLWEIYSFGRVPYP 388

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214

 Score = 42.9 bits (101), Expect = 7e-05
 Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 305 LKKLALKVIVENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSK 351
           +  L  +     L A E+++      ++ D +  GT+   EF+  +S+
Sbjct: 155 VNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 202

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 27/130 (20%)

Query: 329 FKQMDTNDS-GTLTYDEFKAGLSKLGSTLTEVDVKQYM-QAADIDGNGTTLNLSLVQCKD 386
            +   T+ +  +L++++F   LS    T T      Y  +  D D +GT      +  +D
Sbjct: 97  CRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGT------LNRED 150

Query: 387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRI 446
                  +       L        ++A E++             I  I+ E D D+DG I
Sbjct: 151 L----SRLVNC----LTGEGEDTRLSASEMKQL-----------IDNILEESDIDRDGTI 191

Query: 447 SYEEFCATMK 456
           +  EF   + 
Sbjct: 192 NLSEFQHVIS 201

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 43.4 bits (103), Expect = 8e-05
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 9/105 (8%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT----PL-YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA    + + Y     T    P+ +MA E
Sbjct: 146 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
            L   K+  + D+WS G++L+ L++ GA P+   + +     ++ 
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 247

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 43.5 bits (103), Expect = 8e-05
 Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 19/108 (17%)

Query: 126 VNALHACHSNGIMHRDLKPENFIF--TTDDENATLKATDFGLAFFFEEGKV-----YEE- 177
           ++ +   HS  +++RD+KPENF+     +     +   DF LA  + + +      Y E 
Sbjct: 115 ISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREH 174

Query: 178 --VVGTPLYMAPELLGPCKYGKEI----DIWSAGLILYNLLSGAQPFW 219
             + GT  YM+         GKE     D+ + G +    L G+ P W
Sbjct: 175 KSLTGTARYMSINTH----LGKEQSRRDDLEALGHMFMYFLRGSLP-W 217

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 43.9 bits (104), Expect = 8e-05
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPL---YMAPEL 189
             G +HRDL   N +    + N   K +DFGL     ++ +      G  +   + +PE 
Sbjct: 165 DMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA 221

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
           +   K+    D+WS G++L+ ++S G +P+W  S    + A+  
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 43.3 bits (103), Expect = 9e-05
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 8/90 (8%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRD+   N +         +K  DFGL+ + E+ + Y +   T L   +M+PE +
Sbjct: 131 SINCVHRDIAVRNILV---ASPECVKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESI 186

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
              ++    D+W   + ++ +LS G QPF+
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILSFGKQPFF 216

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 8/100 (8%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYEEVVGTPL---YMAPE 188
            S   +HRDL   N +       A +K  DFGLA      K  Y           + APE
Sbjct: 144 GSRRCVHRDLAARNILVE---SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 200

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTL 227
            L    + ++ D+WS G++LY L +   +     + +  +
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM 240

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 32/199 (16%), Positives = 58/199 (29%), Gaps = 23/199 (11%)

Query: 79  CKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN-GI 137
                   K D+ ++  E   GG  ++++  +   +   A S+   +  +L    ++   
Sbjct: 125 ANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLS-SLATAKSILHQLTASLAVAEASLRF 183

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV--------------YEEVVGTPL 183
            HRDL   N +         L  T  G +       +                 VV   +
Sbjct: 184 EHRDLHWGN-VLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDV 242

Query: 184 YMAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQP----FWAESLYGTLTAIMSREIDFK 238
            M  +L  G   Y  +I          N      P     W   L   +   M+ +    
Sbjct: 243 SMDEDLFTGDGDYQFDI-YRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCN 301

Query: 239 SDPWPTISSSAKDLIRRML 257
           +     I    ++  R ML
Sbjct: 302 TPAMKQIKRKIQEFHRTML 320

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 305 LKKLALKVIVENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSK 351
           +  L  +     L A E+++      ++ D +  GT+   EF+  +S+
Sbjct: 124 VNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 171

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 19/140 (13%), Positives = 43/140 (30%), Gaps = 47/140 (33%)

Query: 329 FKQMDTNDS-GTLTYDEFKAGLSKL-GSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKD 386
            +   T+ +  +L++++F   LS    +   ++      +  D D +G            
Sbjct: 66  CRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDG------------ 113

Query: 387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFK------EYNMGDDATIKEI---MF- 436
                                   +  ++L           E      + +K++   +  
Sbjct: 114 -----------------------TLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILE 150

Query: 437 EVDRDKDGRISYEEFCATMK 456
           E D D+DG I+  EF   + 
Sbjct: 151 ESDIDRDGTINLSEFQHVIS 170

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 7/88 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N + T   E+  +K  DFGLA        Y++     L   +MAPE L
Sbjct: 209 SKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 265

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQP 217
               Y  + D+WS G++L+ + + G  P
Sbjct: 266 FDRIYTHQSDVWSFGVLLWEIFTLGGSP 293

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A Length = 139

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            IT    +    +  +  +  + +I    D DKDG +  EEF     
Sbjct: 66  KITGANAKKEMVKSKL-PNTVLGKIWKLADVDKDGLLDDEEFALANH 111

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 13/96 (13%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N +      N  +K  DFG++        Y     T L   +M PE +
Sbjct: 151 SQHFVHRDLATRNCLVG---ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI 207

Query: 191 GPCKYGK---EIDIWSAGLILYNLLS-GAQPFWAES 222
               Y K   E D+WS G+IL+ + + G QP++  S
Sbjct: 208 ---MYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 240

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 1e-04
 Identities = 29/174 (16%), Positives = 55/174 (31%), Gaps = 40/174 (22%)

Query: 16  QQQQQTPQLH---VHVYDDDDDDDDTILGKAYED------IKLHFTIAEELCRGESGR-I 65
            + +    LH   V  Y+     D   L   Y D      I  H    E   R    R +
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV 496

Query: 66  YLCTENSTGLQFACKSISKTSKSDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSV 125
           +L        +F  + I   S +            G++++ +   + Y            
Sbjct: 497 FL------DFRFLEQKIRHDSTA--------WNASGSILNTLQQLKFYKP---------- 532

Query: 126 VNALHACHSNGIMHRDLKP-ENFIFTTDDENATLKATDF-GLAFFFEEGKVYEE 177
               + C ++    R +    +F+   ++     K TD   +A   E+  ++EE
Sbjct: 533 ----YICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEE 582

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 8/91 (8%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPL---YMAPEL 189
           S   +HRDL   N +         +K  DFGL     +    Y       +   + APE 
Sbjct: 139 SKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
           L    +    D W  G+ L+ + + G +P+ 
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWI 226

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           +N  +HRDL   N +     E+ T+K  DFG+     E   Y +     L   +M+PE L
Sbjct: 156 ANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 212

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAES 222
               +    D+WS G++L+ + +   QP+   S
Sbjct: 213 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 8/91 (8%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPL---YMAPEL 189
           +   +HRDL   N +    + N   K +DFGL+    ++ +      G  +   + APE 
Sbjct: 165 NMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
           +   K+    D+WS G++++ +++ G +P+W
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERPYW 252

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 9/105 (8%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG--KVYEEVVGTPL---YMAPE 188
           S   +HRDL   N +    DE  T+K  DFGLA    +          G  L   +MA E
Sbjct: 210 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS 232
            L   K+  + D+WS G++L+ L++ GA P+   + +     ++ 
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 311

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 8/103 (7%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT---PL-YMAPE 188
           H+   +HRDL   N +      +  +K  DFGLA    EG  Y  V      P+ + APE
Sbjct: 151 HAQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 207

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAI 230
            L   K+    D+WS G+ LY LL+         + +  L  I
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI 250

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 7/90 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N + +   E   +K  DFGLA    +   Y       L   +MAPE +
Sbjct: 166 SRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 222

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
               Y  + D+WS G++L+ + S GA P+ 
Sbjct: 223 FDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 18/112 (16%)

Query: 134 SNGIMHRDLKPEN-----FIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL-YMAP 187
            N ++H ++  +N                +K +D G++       + +E     + ++ P
Sbjct: 131 ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQE----RIPWVPP 186

Query: 188 ELLGPCKYGKEI----DIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSRE 234
           E +   +  K +    D WS G  L+ + S G +P  A      L     R 
Sbjct: 187 ECI---ENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRH 235

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 7/93 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
               +HRDL   N +     +   +K  DFG++        Y     T L   +M PE +
Sbjct: 176 GLHFVHRDLATRNCLVG---QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI 232

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQPFWAES 222
              K+  E D+WS G++L+ + + G QP++  S
Sbjct: 233 LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 265

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 7/85 (8%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYEEVVGTPL---YMAPE 188
            S   +HRDL   N +    +    +K  DFGL    E  K  Y           + APE
Sbjct: 143 GSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPE 199

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS 213
            L   K+    D+WS G+ L+ LL+
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT 224

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78

 Score = 38.5 bits (90), Expect = 3e-04
 Identities = 11/49 (22%), Positives = 26/49 (53%), Gaps = 3/49 (6%)

Query: 410 YITADELEAAFKE---YNMGDDATIKEIMFEVDRDKDGRISYEEFCATM 455
            ++ +EL+   +      +    T+ ++  E+D++ DG +S+EEF   +
Sbjct: 25  QLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLV 73

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 8/91 (8%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPL---YMAPEL 189
             G +HRDL   N +    D N   K +DFGL+    ++        G  +   + APE 
Sbjct: 169 DLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
           +    +    D+WS G++++ +L+ G +P+W
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 8/91 (8%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPL---YMAPEL 189
               +HR+L   N +          K +DFGL+     +   Y           + APE 
Sbjct: 454 EKNFVHRNLAARNVLL---VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 510

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
           +   K+    D+WS G+ ++  LS G +P+ 
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALSYGQKPYK 541

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 7/88 (7%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL---YMAPELL 190
           S   +HRDL   N + T   EN  +K  DFGLA        Y++     L   +MAPE L
Sbjct: 175 SQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231

Query: 191 GPCKYGKEIDIWSAGLILYNLLS-GAQP 217
               Y  + D+WS G++++ + + G  P
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSP 259

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103

 Score = 38.4 bits (89), Expect = 5e-04
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 17/64 (26%)

Query: 410 YITADELEAAF-----KEYNMGDDAT------------IKEIMFEVDRDKDGRISYEEFC 452
            +   ELEA F     K Y+  ++               + +M  VD ++D  ++ EEF 
Sbjct: 36  VLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFL 95

Query: 453 ATMK 456
           A+ +
Sbjct: 96  ASTQ 99

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 8/91 (8%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPL---YMAPEL 189
               +HRDL   N +          K +DFGL+     +   Y           + APE 
Sbjct: 128 EKNFVHRDLAARNVLL---VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 184

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
           +   K+    D+WS G+ ++  LS G +P+ 
Sbjct: 185 INFRKFSSRSDVWSYGVTMWEALSYGQKPYK 215

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 8/91 (8%)

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGT--PL-YMAPEL 189
            +  +HRDL   N +          K +DFGL+     +   Y+       P+ + APE 
Sbjct: 135 ESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPFW 219
           +   K+  + D+WS G++++   S G +P+ 
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 222

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYEEVVGTPL---YMAPE 188
            +   +HRDL   N +    +    +K  DFGL     + K  ++          + APE
Sbjct: 131 GTKRYIHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE 187

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS 213
            L   K+    D+WS G++LY L +
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT 212

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Length = 90

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 9/37 (24%), Positives = 21/37 (56%)

Query: 416 LEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFC 452
           ++      +   DA I  +M ++DR+KD  ++++E+ 
Sbjct: 38  IQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYV 74

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 40.4 bits (95), Expect = 9e-04
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYEEVVGTPL---YMAPE 188
            +   +HRDL   N +    +    +K  DFGL     + K  Y+          + APE
Sbjct: 162 GTKRYIHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPE 218

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS 213
            L   K+    D+WS G++LY L +
Sbjct: 219 SLTESKFSVASDVWSFGVVLYELFT 243

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	483
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.93
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.91
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.9
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.9
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.88
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.87
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.86
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.86
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.85
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.85
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.84
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.84
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.83
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.83
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.82
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.81
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.81
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.81
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.81
3fwb_A	161	Cell division control protein 31; gene gating, com	99.81
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.8
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.8
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.79
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.79
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.79
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.78
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.78
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.78
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	99.78
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.78
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	99.78
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.78
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.77
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	99.77
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.76
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	99.75
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.74
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	99.74
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.74
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.74
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.74
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.74
1y1x_A	191	Leishmania major homolog of programmed cell death	99.74
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.74
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	99.72
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.72
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	99.71
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.71
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.71
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	99.71
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.71
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	99.71
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	99.71
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	99.71
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.71
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	99.7
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.7
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	99.69
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	99.69
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	99.68
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	99.68
2hps_A	186	Coelenterazine-binding protein with bound coelent;	99.67
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	99.67
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	99.67
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.66
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	99.65
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.65
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.64
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.63
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	99.63
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.62
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.61
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	99.61
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.6
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.6
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.6
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	99.59
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	99.59
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.58
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	99.58
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.58
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	99.58
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.58
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.56
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	99.54
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	99.54
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.53
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.52
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.52
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	99.51
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.44
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.43
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.43
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.42
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	99.4
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.39
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.39
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	99.38
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.37
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.36
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.34
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.32
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	99.32
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.31
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	99.27
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	99.26
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	99.24
1y1x_A	191	Leishmania major homolog of programmed cell death	99.23
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	99.22
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	99.19
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.18
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	99.18
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.18
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	99.17
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.16
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	99.16
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	99.15
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	99.15
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	99.14
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	99.13
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	99.12
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.12
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.11
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	99.11
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.1
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	99.1
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	99.1
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	99.09
1c07_A	95	Protein (epidermal growth factor receptor pathway	99.09
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.09
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	99.08
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	99.08
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	99.07
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	99.07
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	99.07
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	99.07
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	99.07
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	99.06
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	99.05
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	99.05
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	99.05
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.05
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.03
3li6_A	66	Calcium-binding protein; calcium signaling protein	99.03
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	99.02
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	99.01
1h8b_A	75	ACT-EF34, alpha-actinin 2, skeletal muscle isoform	99.01
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.0
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	99.0
2jq6_A	139	EH domain-containing protein 1; metal binding prot	99.0
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	98.99
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	98.99
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	98.99
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	98.98
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	98.97
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	98.96
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	98.95
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	98.95
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	98.94
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	98.93
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	98.92
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	98.92
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	98.92
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	98.92
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	98.91
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	98.91
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	98.9
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	98.89
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	98.89
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	98.87
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	98.87
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	98.87
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	98.86
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	98.86
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	98.86
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	98.85
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	98.84
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	98.82
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	98.82
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	98.79
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	98.78
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	98.76
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.75
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	98.75
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	98.73
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	98.72
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	98.72
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	98.71
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	98.69
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	98.69
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	98.69
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	98.69
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	98.68
2jnf_A	158	Troponin C; stretch activated muscle contraction,	98.68
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	98.68
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	98.67
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	98.66
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	98.66
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	98.65
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	98.64
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	98.64
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	98.64
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	98.62
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	98.62
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	98.61
3fwb_A	161	Cell division control protein 31; gene gating, com	98.59
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	98.59
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	98.58
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.58
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	98.56
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	98.56
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	98.55
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	98.55
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	98.55
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	98.55
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	98.54
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	98.53
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	98.53
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	98.52
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	98.51
3li6_A	66	Calcium-binding protein; calcium signaling protein	98.51
1c07_A	95	Protein (epidermal growth factor receptor pathway	98.51
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	98.5
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	98.5
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	98.49
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	98.49
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	98.49
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	98.49
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	98.48
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	98.47
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	98.46
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	98.46
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	98.45
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	98.45
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	98.45
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	98.45
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	98.44
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	98.44
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.43
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	98.43
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	98.43
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.43
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	98.43
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	98.41
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	98.4
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	98.4
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	98.4
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.4
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	98.38
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	98.38

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1.1e-67  Score=551.37  Aligned_cols=411  Identities=32%  Similarity=0.537  Sum_probs=355.5

Q ss_pred             ccccccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc---------------------------
Q 048594           38 TILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE---------------------------   90 (483)
Q Consensus        38 ~~~~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~---------------------------   90 (483)
                      .........+.++|.+.+.||+|+||+||+|.++.+|+.||||++.+......                           
T Consensus        15 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~   94 (484)
T 3nyv_A           15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF   94 (484)
T ss_dssp             ----CCCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             eeeccCCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            34455566788999999999999999999999999999999999976532111                           


Q ss_pred             ------CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           91 ------GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        91 ------~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                            .|+|+|||.|++|.+++...+++++..+..++.||+.||.|||++||+||||||+|||+...+..+.+||+|||
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg  174 (484)
T 3nyv_A           95 FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG  174 (484)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTT
T ss_pred             EEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeee
Confidence                  19999999999999999998999999999999999999999999999999999999999765567899999999


Q ss_pred             cceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCC
Q 048594          165 LAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  244 (483)
                      ++............+||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+....+..+..+...++.+.|+.
T Consensus       175 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  253 (484)
T 3nyv_A          175 LSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK  253 (484)
T ss_dssp             HHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGG
T ss_pred             eeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCccccc
Confidence            9988766665566789999999999977 799999999999999999999999999999999999999988888778888


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCCCCC--CCCCCCCHHHHHHHHHHhhhhHHHHHHHHHhhhcc-chHH
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGE--AWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENL-PAEE  321 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~kl~~~~l~~i~~~~-~~~~  321 (483)
                      +|+++++||.+||++||.+|||+.++|+||||+....+  ....|.....+.++++|...+++++.++.+++..+ +.++
T Consensus       254 ~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~  333 (484)
T 3nyv_A          254 VSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDE  333 (484)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHHHhccCcHHH
Confidence            99999999999999999999999999999999843222  22345556778899999999999999999998776 7888


Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHH----HHHHHhcCCCCC-------HHHHHHHHHhccCCCCCceeechhh--------
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEF----KAGLSKLGSTLT-------EVDVKQYMQAADIDGNGTTLNLSLV--------  382 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el----~~~l~~~~~~~~-------~~~~~~l~~~~d~~~~g~~~~~~~~--------  382 (483)
                      +..++++|..+|.|++|.|+.+||    ..+++.+|..++       +++++++|+.+|.|++|.+...++.        
T Consensus       334 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~  413 (484)
T 3nyv_A          334 TKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKT  413 (484)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccc
Confidence            999999999999999999999999    455555677777       8899999999999999984443332        


Q ss_pred             -hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          383 -QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       383 -~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                       ...+.+..+|+.||+|+        +|+|+.+||..+|...+. ++++++++|..+|.|+||.|+|+||+.+|..-
T Consensus       414 ~~~~~~~~~~F~~~D~d~--------dG~I~~~El~~~l~~~~~-~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~  481 (484)
T 3nyv_A          414 LLSRERLERAFRMFDSDN--------SGKISSTELATIFGVSDV-DSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL  481 (484)
T ss_dssp             HHHHHHHHHHHHHHCTTC--------CSEEEHHHHHHHHHHTTC-CHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred             cCcHHHHHHHHHHHCCCC--------CCcCCHHHHHHHHHhcCC-CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence             23577899999999999        999999999999988444 78999999999999999999999999999764

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=7.3e-68  Score=553.83  Aligned_cols=418  Identities=32%  Similarity=0.531  Sum_probs=359.5

Q ss_pred             CCCccccccccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------
Q 048594           33 DDDDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------   89 (483)
Q Consensus        33 ~~~~~~~~~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------   89 (483)
                      ...+..++......+.++|.+++.||+|+||+||+|.++.++..+|+|++.+.....                       
T Consensus        21 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~  100 (494)
T 3lij_A           21 QATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMK  100 (494)
T ss_dssp             CCCGGGGCCCCBCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCC
T ss_pred             ccchhheeecCCCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCe
Confidence            344555666667789999999999999999999999999999999999997653211                       


Q ss_pred             ---------cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEE
Q 048594           90 ---------EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA  160 (483)
Q Consensus        90 ---------~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl  160 (483)
                               ..|+|||||.|++|.+.+....++++..++.++.||+.||.|||++||+||||||+|||+...+..+.+||
T Consensus       101 ~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl  180 (494)
T 3lij_A          101 LYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKI  180 (494)
T ss_dssp             EEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEE
T ss_pred             EEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEE
Confidence                     11899999999999999988889999999999999999999999999999999999999976555677999


Q ss_pred             eecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC
Q 048594          161 TDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD  240 (483)
Q Consensus       161 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  240 (483)
                      +|||++............+||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+......+..+..+...++.+
T Consensus       181 ~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  259 (494)
T 3lij_A          181 VDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSP  259 (494)
T ss_dssp             CCCTTCEECBTTBCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSG
T ss_pred             EECCCCeECCCCccccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCch
Confidence            99999988776666667789999999999875 79999999999999999999999999999999999999998888888


Q ss_pred             CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCCCC---CCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHhhhcc
Q 048594          241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENG---EAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENL  317 (483)
Q Consensus       241 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~kl~~~~l~~i~~~~  317 (483)
                      .|+.+|+.+++||.+||++||.+|||+.++|+||||+....   .....|.....+.++++|....++++.++.+++..+
T Consensus       260 ~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa~l~~ia~~~  339 (494)
T 3lij_A          260 EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKL  339 (494)
T ss_dssp             GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHHHHHHHHHHS
T ss_pred             hcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence            88899999999999999999999999999999999973211   112334445678899999999999999999998776


Q ss_pred             -chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCC--------CCCHHHHHHHHHhccCCCCCceeechhh------
Q 048594          318 -PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS--------TLTEVDVKQYMQAADIDGNGTTLNLSLV------  382 (483)
Q Consensus       318 -~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~--------~~~~~~~~~l~~~~d~~~~g~~~~~~~~------  382 (483)
                       +.+++.+++++|+.+|.|++|.|+.+||..+++.++.        .+++++++.+|+.+|.|++|.+...++.      
T Consensus       340 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~  419 (494)
T 3lij_A          340 TSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDR  419 (494)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCH
T ss_pred             ccHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh
Confidence             8899999999999999999999999999999999854        5568899999999999999984443332      


Q ss_pred             ---hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          383 ---QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       383 ---~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                         ...+.+..+|+.||+|+        +|+|+.+||++++...+. ++++++++|.++|.|+||.|+|+||+.+|+...
T Consensus       420 ~~~~~~~~~~~~F~~~D~d~--------~G~Is~~El~~~l~~~~~-~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~  490 (494)
T 3lij_A          420 KSLLSKDKLESAFQKFDQDG--------NGKISVDELASVFGLDHL-ESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLC  490 (494)
T ss_dssp             HHHTCHHHHHHHHHHHCTTC--------SSEECHHHHHHHC-CCSC-CCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHHS
T ss_pred             hccccHHHHHHHHHHHCCCC--------CCcCCHHHHHHHHHhcCC-CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhhc
Confidence               24677899999999999        999999999999987333 788999999999999999999999999997654


Q ss_pred             C
Q 048594          460 H  460 (483)
Q Consensus       460 ~  460 (483)
                      .
T Consensus       491 ~  491 (494)
T 3lij_A          491 S  491 (494)
T ss_dssp             S
T ss_pred             c
Confidence            3

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.9e-67  Score=551.97  Aligned_cols=416  Identities=28%  Similarity=0.472  Sum_probs=358.5

Q ss_pred             CccccccccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------
Q 048594           35 DDDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------   89 (483)
Q Consensus        35 ~~~~~~~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------   89 (483)
                      .+..++......+.++|.+++.||+|+||+||+|.++.++..+|+|++.+.....                         
T Consensus        22 ~~~~~~~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~  101 (504)
T 3q5i_A           22 NPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK  101 (504)
T ss_dssp             CGGGGCCEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHH
T ss_pred             chhheeeccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHH
Confidence            4455566667789999999999999999999999999999999999997643211                         


Q ss_pred             ------------------cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee
Q 048594           90 ------------------EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT  151 (483)
Q Consensus        90 ------------------~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~  151 (483)
                                        ..|+|||||.|++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+..
T Consensus       102 ~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~  181 (504)
T 3q5i_A          102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLEN  181 (504)
T ss_dssp             TCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESS
T ss_pred             hCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEec
Confidence                              01899999999999999988889999999999999999999999999999999999999965


Q ss_pred             CCCCCcEEEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHH
Q 048594          152 DDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM  231 (483)
Q Consensus       152 ~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~  231 (483)
                      ++....+||+|||++............+||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+....+..+.
T Consensus       182 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~  260 (504)
T 3q5i_A          182 KNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE  260 (504)
T ss_dssp             TTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            44445799999999998776655667789999999999875 68999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCCCCCCC--CCCCCHHHHHHHHHHhhhhHHHHHH
Q 048594          232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAW--DRPIDTAIISRVKQFRAMSKLKKLA  309 (483)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~kl~~~~  309 (483)
                      .+...++.+.|+.+|+++++||.+||++||.+|||++|+|+||||+.......  ..+.....+.++++|....++++.+
T Consensus       261 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~  340 (504)
T 3q5i_A          261 KGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAA  340 (504)
T ss_dssp             HCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHH
T ss_pred             cCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            98887777777889999999999999999999999999999999983322111  1111234567888888999999999


Q ss_pred             HHHhhhcc-chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhc--------CCCCCHHHHHHHHHhccCCCCCceeech
Q 048594          310 LKVIVENL-PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL--------GSTLTEVDVKQYMQAADIDGNGTTLNLS  380 (483)
Q Consensus       310 l~~i~~~~-~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~--------~~~~~~~~~~~l~~~~d~~~~g~~~~~~  380 (483)
                      +.+++..+ +.+++.+++++|+.+|.|++|.|+.+||..+++.+        |..+++++++.+|+.+|.|++|.+...+
T Consensus       341 l~~i~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~E  420 (504)
T 3q5i_A          341 ILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSE  420 (504)
T ss_dssp             HHHHHHHTSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHH
T ss_pred             HHHhhccCCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHH
Confidence            99988776 88999999999999999999999999999999998        6678899999999999999999844433


Q ss_pred             hh---------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHH
Q 048594          381 LV---------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEF  451 (483)
Q Consensus       381 ~~---------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef  451 (483)
                      +.         ...+.+..+|+.||+|+        +|+|+.+||+.++...+. ++++++++|..+|.|+||.|+|+||
T Consensus       421 F~~~~~~~~~~~~~~~~~~~F~~~D~d~--------dG~Is~~El~~~l~~~~~-~~~~~~~~~~~~D~d~dG~I~~~EF  491 (504)
T 3q5i_A          421 FISVCMDKQILFSEERLRRAFNLFDTDK--------SGKITKEELANLFGLTSI-SEKTWNDVLGEADQNKDNMIDFDEF  491 (504)
T ss_dssp             HHHHHSCHHHHTCHHHHHHHHHHHCTTC--------CSEECHHHHHHHTTCSCC-CHHHHHHHHHTTCSSCSSSEEHHHH
T ss_pred             HHHHHHhhhcccCHHHHHHHHHHhcCCC--------CCcCcHHHHHHHHhhCCC-CHHHHHHHHHHhCCCCCCcEeHHHH
Confidence            22         23578899999999999        999999999999988554 7899999999999999999999999


Q ss_pred             HHHHHcCCC
Q 048594          452 CATMKTGTH  460 (483)
Q Consensus       452 ~~~~~~~~~  460 (483)
                      +.+|+....
T Consensus       492 ~~~~~~~~~  500 (504)
T 3q5i_A          492 VSMMHKICD  500 (504)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHHhcc
Confidence            999976543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=7.5e-68  Score=552.74  Aligned_cols=405  Identities=32%  Similarity=0.568  Sum_probs=333.6

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------CcCe
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------DEGY   92 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------~~~~   92 (483)
                      ..+.++|.+++.||+|+||+||+|.++.+|+.||||++.+....                                ...|
T Consensus        18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   97 (486)
T 3mwu_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY   97 (486)
T ss_dssp             CHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEE
Confidence            36788999999999999999999999999999999998643211                                1119


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|||||.|++|.+.+...+++++..+..++.||+.||.|||++||+||||||+|||+...+..+.+||+|||++......
T Consensus        98 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  177 (486)
T 3mwu_A           98 IVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN  177 (486)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence            99999999999999988889999999999999999999999999999999999999976556678999999999877666


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ......+||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+....+..+..+...++.+.|+.+|+++++|
T Consensus       178 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  256 (486)
T 3mwu_A          178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL  256 (486)
T ss_dssp             ----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHH
T ss_pred             CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHH
Confidence            55566789999999999987 68999999999999999999999999999999999999988888887888999999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCCCCCCCCCCC---CCCHHHHHHHHHHhhhhHHHHHHHHHhhhcc-chHHHhhHHHH
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLNYENGEAWDR---PIDTAIISRVKQFRAMSKLKKLALKVIVENL-PAEEIQKHKET  328 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~kl~~~~l~~i~~~~-~~~~~~~l~~~  328 (483)
                      |.+||++||.+|||+.++|+||||+.........   +.......++++|....++++.++.+++..+ +.+++.+++++
T Consensus       257 i~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~l~~~  336 (486)
T 3mwu_A          257 IRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEI  336 (486)
T ss_dssp             HHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence            9999999999999999999999998332221111   1123456788899999999999999998776 88999999999


Q ss_pred             HhhcCCCCCCCcCHHHHHHHHH----hcCCCCC----------HHHHHHHHHhccCCCCCceeechhh---------hch
Q 048594          329 FKQMDTNDSGTLTYDEFKAGLS----KLGSTLT----------EVDVKQYMQAADIDGNGTTLNLSLV---------QCK  385 (483)
Q Consensus       329 F~~~D~d~~G~l~~~el~~~l~----~~~~~~~----------~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~  385 (483)
                      |+.+|.|+||.|+.+||..++.    .+|..++          +++++.+|..+|.|++|.+...+++         ...
T Consensus       337 F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~  416 (486)
T 3mwu_A          337 FRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSR  416 (486)
T ss_dssp             HHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCH
T ss_pred             HHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchH
Confidence            9999999999999999965554    4477666          8889999999999999984443332         235


Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      +.+..+|+.||+|+        +|+|+.+||+.++..+|.. ++++++++|..+|.|+||.|+|+||+.+|..-
T Consensus       417 ~~~~~~F~~~D~d~--------dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~  482 (486)
T 3mwu_A          417 ERMERAFKMFDKDG--------SGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF  482 (486)
T ss_dssp             HHHHHHHHHHCSSC--------SSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCC--------CCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            77899999999999        9999999999999999987 89999999999999999999999999999754

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=5.7e-55  Score=424.16  Aligned_cols=226  Identities=28%  Similarity=0.469  Sum_probs=203.2

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+...                                 ....||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            579999999999999999999999999999999975421                                 11119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC---
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG---  172 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~---  172 (483)
                      |||+||+|.+++.+.+++++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|+.+...   
T Consensus       112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl---~~~g~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECCTTTTC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE---cCCCCEEEEEcCCceecCCCCCc
Confidence            999999999999998999999999999999999999999999999999999999   67789999999999987532   


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ....+.+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+....+..|.+..+.++    ..+|+++++|
T Consensus       189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dl  264 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKARDL  264 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----TTCCHHHHHH
T ss_pred             ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----cccCHHHHHH
Confidence            234567999999999999998999999999999999999999999999999999999998877665    3689999999


Q ss_pred             HHHhCccCCCCCCCHHH------HHcCCcCCCCCC
Q 048594          253 IRRMLIRDPNNQITVAQ------ILKHPWLNYENG  281 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e------~L~h~~~~~~~~  281 (483)
                      |.+||++||.+|||++|      +++||||+.-++
T Consensus       265 i~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw  299 (311)
T 4aw0_A          265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW  299 (311)
T ss_dssp             HHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred             HHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCH
Confidence            99999999999999988      589999985443

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.5e-54  Score=413.85  Aligned_cols=221  Identities=34%  Similarity=0.610  Sum_probs=185.0

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc---------------------------------CeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE---------------------------------GYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~---------------------------------~~lv~   95 (483)
                      ++|++++.||+|+||+||+|.++.+|+.||||++.+......                                 .|+||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            479999999999999999999999999999999976542211                                 19999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      ||| +|+|.+++.+.+++++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|+........
T Consensus        93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~~~~~  168 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFL  168 (275)
T ss_dssp             ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTCCEEECCSSCC---------
T ss_pred             eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE---CCCCCEEEeecCCCeecCCCCcc
Confidence            999 67999999999999999999999999999999999999999999999999   67789999999999887766666


Q ss_pred             cccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .+.+||+.|+|||++.+..| +.++||||+||++|+|++|++||.+.+.......+.++.+.++    ..+|+++++||.
T Consensus       169 ~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~  244 (275)
T 3hyh_A          169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KFLSPGAAGLIK  244 (275)
T ss_dssp             ------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----TTSCHHHHHHHH
T ss_pred             CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence            67899999999999998776 5799999999999999999999999998899999988876654    468999999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcCC
Q 048594          255 RMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +||++||.+|||++|+|+||||+
T Consensus       245 ~~L~~dP~~R~s~~eil~hpw~k  267 (275)
T 3hyh_A          245 RMLIVNPLNRISIHEIMQDDWFK  267 (275)
T ss_dssp             HHSCSSGGGSCCHHHHHHCHHHH
T ss_pred             HHccCChhHCcCHHHHHcCcccc
Confidence            99999999999999999999997

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.1e-53  Score=421.30  Aligned_cols=227  Identities=29%  Similarity=0.550  Sum_probs=201.8

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC------------------------------eEEE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------------------YLKR   95 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~------------------------------~lv~   95 (483)
                      +...+|++++.||+|+||+||+|+++.+|+.||||++.........                              ||||
T Consensus        71 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm  150 (346)
T 4fih_A           71 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM  150 (346)
T ss_dssp             CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ChhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            3457899999999999999999999999999999999765422211                              9999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ce
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~  174 (483)
                      |||+||+|.+++.. +++++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|..+... ..
T Consensus       151 Ey~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~~~~~  226 (346)
T 4fih_A          151 EFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPR  226 (346)
T ss_dssp             CCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSSSCC
T ss_pred             eCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---CCCCCEEEecCcCceecCCCCCc
Confidence            99999999999876 479999999999999999999999999999999999999   67789999999999887543 34


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+....+..|..... .....++.+|+++++||.
T Consensus       227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~  305 (346)
T 4fih_A          227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSLKGFLD  305 (346)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-CCCSCGGGSCHHHHHHHH
T ss_pred             ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCCccccCCHHHHHHHH
Confidence            4567999999999999998999999999999999999999999999998888888876533 223345678999999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcCC
Q 048594          255 RMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +||++||.+|||++|+|+||||+
T Consensus       306 ~~L~~dP~~R~ta~e~l~Hp~~~  328 (346)
T 4fih_A          306 RLLVRDPAQRATAAELLKHPFLA  328 (346)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGG
T ss_pred             HHcCCChhHCcCHHHHhcCHhhc
Confidence            99999999999999999999998

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.5e-53  Score=420.97  Aligned_cols=223  Identities=26%  Similarity=0.475  Sum_probs=193.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------CeEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GYLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~lv~E   96 (483)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+......                                .|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            689999999999999999999999999999999976542211                                199999


Q ss_pred             ccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-
Q 048594           97 HCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-  173 (483)
Q Consensus        97 ~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-  173 (483)
                      ||+||+|.++|...  ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+.... 
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~~~~  180 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNSTVE  180 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEE---CTTCCEEECSTTEESCCCHHHH
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCCEEEcccccceeecCCcc
Confidence            99999999999754  457999999999999999999999999999999999999   677899999999998765432 


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      .....+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..+.+..+..+...   +.+..+|+++++||
T Consensus       181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~---~~~~~~s~~~~~li  257 (350)
T 4b9d_A          181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP---PVSLHYSYDLRSLV  257 (350)
T ss_dssp             HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC---CCCTTSCHHHHHHH
T ss_pred             cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC---CCCccCCHHHHHHH
Confidence            234568999999999999989999999999999999999999999999999999998887653   23357899999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcCC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+||++||.+|||++|+|+||||+
T Consensus       258 ~~~L~~dP~~R~s~~e~l~hp~~~  281 (350)
T 4b9d_A          258 SQLFKRNPRDRPSVNSILEKGFIA  281 (350)
T ss_dssp             HHHTCSSGGGSCCHHHHHTSHHHH
T ss_pred             HHHccCChhHCcCHHHHhcCHHhh
Confidence            999999999999999999999997

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3e-53  Score=411.91  Aligned_cols=223  Identities=30%  Similarity=0.502  Sum_probs=197.7

Q ss_pred             cceEEeeeecccCceeEEEEEEC---CCCCEEEEEEeccCCCC--------------------------------CcCeE
Q 048594           49 LHFTIAEELCRGESGRIYLCTEN---STGLQFACKSISKTSKS--------------------------------DEGYL   93 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~--------------------------------~~~~l   93 (483)
                      ++|++++.||+|+||+||+|++.   .+++.||||++.+....                                ...|+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            57999999999999999999984   46889999999764311                                00199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-C
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-G  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~  172 (483)
                      |||||+||+|.+++.+.+++++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|+.... .
T Consensus       104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~~~  180 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHE  180 (304)
T ss_dssp             EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTSCEEEESSEEEEC-----
T ss_pred             EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE---cCCCCEEecccccceeccCCC
Confidence            99999999999999998999999999999999999999999999999999999999   6778999999999986543 3


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ....+.+||+.|||||++.+..|+.++||||+||++|+|++|.+||.+.+..+.+..|.+..+.++    +.+|+++++|
T Consensus       181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l  256 (304)
T 3ubd_A          181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQSL  256 (304)
T ss_dssp             CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred             ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CcCCHHHHHH
Confidence            334567899999999999998999999999999999999999999999999999999988776554    4689999999


Q ss_pred             HHHhCccCCCCCCC-----HHHHHcCCcCCC
Q 048594          253 IRRMLIRDPNNQIT-----VAQILKHPWLNY  278 (483)
Q Consensus       253 i~~~L~~dP~~R~t-----~~e~L~h~~~~~  278 (483)
                      |.+||++||.+|||     ++|+++||||+.
T Consensus       257 i~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~  287 (304)
T 3ubd_A          257 LRMLFKRNPANRLGAGPDGVEEIKRHSFFST  287 (304)
T ss_dssp             HHHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred             HHHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence            99999999999998     579999999983

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.4e-52  Score=421.57  Aligned_cols=227  Identities=29%  Similarity=0.550  Sum_probs=202.3

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC------------------------------eEEE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------------------YLKR   95 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~------------------------------~lv~   95 (483)
                      +-.++|++++.||+|+||+||+|+++.+|+.||||++.........                              ||||
T Consensus       148 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm  227 (423)
T 4fie_A          148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM  227 (423)
T ss_dssp             CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence            3457899999999999999999999999999999999765432211                              9999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ce
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~  174 (483)
                      |||+||+|.+++.. +++++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|..+... ..
T Consensus       228 Ey~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl---~~~g~vKl~DFGla~~~~~~~~~  303 (423)
T 4fie_A          228 EFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPR  303 (423)
T ss_dssp             ECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEE---CTTCCEEECCCTTCEECCSSCCC
T ss_pred             eCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEecCccceECCCCCcc
Confidence            99999999999875 479999999999999999999999999999999999999   67789999999999887543 34


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+....+..|..... .....+..+|+++++||.
T Consensus       304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~  382 (423)
T 4fie_A          304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSLKGFLD  382 (423)
T ss_dssp             BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCCSCTTSSCHHHHHHHH
T ss_pred             ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCcccccCCHHHHHHHH
Confidence            4567999999999999998999999999999999999999999999998888888876533 233445689999999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcCC
Q 048594          255 RMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +||++||.+|||++|+|+||||+
T Consensus       383 ~~L~~dP~~R~ta~ell~Hp~~~  405 (423)
T 4fie_A          383 RLLVRDPAQRATAAELLKHPFLA  405 (423)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGG
T ss_pred             HHcCCChhHCcCHHHHhcCHHhc
Confidence            99999999999999999999998

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=6.9e-52  Score=400.31  Aligned_cols=221  Identities=21%  Similarity=0.338  Sum_probs=188.3

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------------cCeEE
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------------EGYLK   94 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------------~~~lv   94 (483)
                      |++.+.||+|+||+||+|.++.++..||+|++.......                                    ..|||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            478889999999999999999999999999997543111                                    12899


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      ||||+||+|.+++.+.+++++..++.++.||+.||+|||+++  |+||||||+|||++  +.++.+||+|||+|+.... 
T Consensus       108 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~--~~~g~vKl~DFGla~~~~~-  184 (290)
T 3fpq_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATLKRA-  184 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES--STTSCEEECCTTGGGGCCT-
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE--CCCCCEEEEeCcCCEeCCC-
Confidence            999999999999998889999999999999999999999998  99999999999994  2467899999999976433 


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY-GTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      ......+||+.|||||++.+ .|+.++|||||||++|+|++|++||.+.... .....+..+...  .......++++++
T Consensus       185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~  261 (290)
T 3fpq_A          185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPEVKE  261 (290)
T ss_dssp             TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCCHHHHH
T ss_pred             CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC--CCCCccCCHHHHH
Confidence            34456789999999999976 6999999999999999999999999875544 444445443221  1223457899999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||.+||++||.+|||++|+|+||||+
T Consensus       262 li~~~L~~dP~~R~s~~e~l~Hp~~~  287 (290)
T 3fpq_A          262 IIEGCIRQNKDERYSIKDLLNHAFFQ  287 (290)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHHccCChhHCcCHHHHhcCcccc
Confidence            99999999999999999999999997

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=4.5e-52  Score=408.48  Aligned_cols=226  Identities=23%  Similarity=0.328  Sum_probs=196.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------CeEEEeccCCCC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------GYLKREHCDGGT  102 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------~~lv~E~~~g~~  102 (483)
                      .+.|.+.++||+|+||+||+|+++.+|+.||||++........                         .|||||||+||+
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~  136 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS  136 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCc
Confidence            3579999999999999999999999999999999987542211                         199999999999


Q ss_pred             hHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCC-cEEEeecccceeccCCce------e
Q 048594          103 LVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA-TLKATDFGLAFFFEEGKV------Y  175 (483)
Q Consensus       103 L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~-~ikl~Dfg~a~~~~~~~~------~  175 (483)
                      |.++|.+.+++++..++.++.||+.||.|||++||+||||||+|||+   +.++ .+||+|||+|+.+.....      .
T Consensus       137 L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~~vKl~DFGla~~~~~~~~~~~~~~~  213 (336)
T 4g3f_A          137 LGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL---SSDGSRAALCDFGHALCLQPDGLGKSLLTG  213 (336)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEE---CTTSCCEEECCCTTCEEC------------
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE---eCCCCEEEEeeCCCCeEccCCCcccceecC
Confidence            99999988899999999999999999999999999999999999999   4555 699999999988754321      1


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ...+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+.......|......+. ..++.+|+++++||.+
T Consensus       214 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~~li~~  292 (336)
T 4g3f_A          214 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIR-EIPPSCAPLTAQAIQE  292 (336)
T ss_dssp             CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGG-GSCTTSCHHHHHHHHH
T ss_pred             CccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCch-hcCccCCHHHHHHHHH
Confidence            235799999999999998999999999999999999999999998887777888877655432 2346799999999999


Q ss_pred             hCccCCCCCCCHHHH-------------HcCCcCC
Q 048594          256 MLIRDPNNQITVAQI-------------LKHPWLN  277 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~-------------L~h~~~~  277 (483)
                      ||++||.+|||+.|+             |+|||+.
T Consensus       293 ~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~  327 (336)
T 4g3f_A          293 GLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKG  327 (336)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSS
T ss_pred             HccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcC
Confidence            999999999999997             5799997

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-50  Score=408.63  Aligned_cols=229  Identities=29%  Similarity=0.410  Sum_probs=196.6

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------------   88 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------------   88 (483)
                      ++.++|.+++.||+|+||+||+|+++.||+.||||++.+....                                     
T Consensus        51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~  130 (398)
T 4b99_A           51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGE  130 (398)
T ss_dssp             CCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTT
T ss_pred             CCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccccc
Confidence            5678999999999999999999999999999999999654210                                     


Q ss_pred             -CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           89 -DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                       ...|||||||. |+|.+++...+++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+
T Consensus       131 ~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~---~~~~~~Ki~DFGla~  206 (398)
T 4b99_A          131 FKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMAR  206 (398)
T ss_dssp             CCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTTCB
T ss_pred             CCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc---CCCCCEEEeecceee
Confidence             12289999996 5799999999999999999999999999999999999999999999999   678899999999998


Q ss_pred             eccCC-----ceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC-
Q 048594          168 FFEEG-----KVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD-  240 (483)
Q Consensus       168 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-  240 (483)
                      .+...     ......+||+.|+|||++.+. .++.++||||+||++|+|++|++||.+.+..+.+..|.......+.. 
T Consensus       207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~  286 (398)
T 4b99_A          207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV  286 (398)
T ss_dssp             CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred             ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHH
Confidence            76432     233457899999999998775 46899999999999999999999999999988888876543222110 


Q ss_pred             --------------------------CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          241 --------------------------PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       241 --------------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                                .++.+++++++||.+||++||.+|||++|+|+||||+.
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  350 (398)
T 4b99_A          287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK  350 (398)
T ss_dssp             TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTT
T ss_pred             hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCc
Confidence                                      12467899999999999999999999999999999984

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.1e-49  Score=396.04  Aligned_cols=228  Identities=29%  Similarity=0.490  Sum_probs=183.8

Q ss_pred             cccccceEEeeeecccCceeEEEEEEC---CCCCEEEEEEeccCCCC-----------------------------CcCe
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTEN---STGLQFACKSISKTSKS-----------------------------DEGY   92 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~-----------------------------~~~~   92 (483)
                      -.+.++|++.+.||+|+||+||+|+++   .+++.||+|.+.+....                             +..|
T Consensus        17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            357789999999999999999999875   46789999998654311                             1119


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|||||+|++|.+++.   .+++.+++.++.||+.||+|||++||+||||||+|||++  ...+.+||+|||+|+.....
T Consensus        97 lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~--~~~~~~kl~DFGla~~~~~~  171 (361)
T 4f9c_A           97 IAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYN--RRLKKYALVDFGLAQGTHDT  171 (361)
T ss_dssp             EEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTCEECTTC
T ss_pred             EEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEe--CCCCeEEECcCCCCcccCCc
Confidence            9999999999999983   699999999999999999999999999999999999995  23478999999999765432


Q ss_pred             c-----------------------------eecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCC-
Q 048594          173 K-----------------------------VYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAE-  221 (483)
Q Consensus       173 ~-----------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~-  221 (483)
                      .                             .....+||+.|+|||++.+. .|+.++||||+||++|+|++|++||.+. 
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~  251 (361)
T 4f9c_A          172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS  251 (361)
T ss_dssp             SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred             cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence            1                             12345799999999999775 4899999999999999999999999654 


Q ss_pred             ChHHHHHHHHcc--------------------------------------c------------cCCCCCCCCCCCHHHHH
Q 048594          222 SLYGTLTAIMSR--------------------------------------E------------IDFKSDPWPTISSSAKD  251 (483)
Q Consensus       222 ~~~~~~~~i~~~--------------------------------------~------------~~~~~~~~~~~~~~~~~  251 (483)
                      +..+.+..|...                                      .            .......|+.+|+++++
T Consensus       252 ~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~D  331 (361)
T 4f9c_A          252 DDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYD  331 (361)
T ss_dssp             SHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHH
T ss_pred             CHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHH
Confidence            444444444320                                      0            00111235678999999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||.+||++||.+|||++|+|+||||+
T Consensus       332 Ll~~lL~~dP~~R~ta~eaL~Hp~f~  357 (361)
T 4f9c_A          332 LLDKLLDLNPASRITAEEALLHPFFK  357 (361)
T ss_dssp             HHHHHTCSCTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHCcCChhHCcCHHHHhcCcccC
Confidence            99999999999999999999999997

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.1e-49  Score=419.10  Aligned_cols=235  Identities=35%  Similarity=0.566  Sum_probs=213.9

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeE
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYL   93 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~l   93 (483)
                      .+.+-++|.+++.||+|+||+||+|.++.+|+.||||++......                              ...||
T Consensus       152 ~~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  231 (573)
T 3uto_A          152 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM  231 (573)
T ss_dssp             SSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred             CCcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence            345678999999999999999999999999999999999765311                              11299


Q ss_pred             EEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |||||+||+|.++|.. .+.+++..++.++.||+.||.|||++||+||||||+|||+..+ ..+.+||+|||+|..+...
T Consensus       232 v~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~-~~~~vKl~DFG~a~~~~~~  310 (573)
T 3uto_A          232 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPK  310 (573)
T ss_dssp             EEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCSSCEECCTT
T ss_pred             EEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC-CCCCEEEeeccceeEccCC
Confidence            9999999999999965 4689999999999999999999999999999999999999532 3478999999999998877


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ......+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+..+.+..|......++...++.+|+++++|
T Consensus       311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dl  390 (573)
T 3uto_A          311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF  390 (573)
T ss_dssp             SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHH
T ss_pred             CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHH
Confidence            77778899999999999999999999999999999999999999999999999999999998888888888999999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                      |.+||++||.+|||+.|+|+||||+..
T Consensus       391 i~~~L~~dp~~R~t~~e~l~Hpw~~~~  417 (573)
T 3uto_A          391 IRKLLLADPNTRMTIHQALEHPWLTPG  417 (573)
T ss_dssp             HHTTSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             HHHHccCChhHCcCHHHHhcCcCcCCC
Confidence            999999999999999999999999843

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=5.1e-49  Score=414.74  Aligned_cols=224  Identities=26%  Similarity=0.443  Sum_probs=195.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------------CCcC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------------SDEG   91 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------------~~~~   91 (483)
                      -++|.++++||+|+||+||+|+++.||+.||||++.+...                                    .+..
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            3689999999999999999999999999999999965320                                    0111


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+|||||+||+|.++|.+.+++++..++.++.||+.||.|||++|||||||||+|||+   +.++.|||+|||+|..+..
T Consensus       268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl---d~~G~vKL~DFGlA~~~~~  344 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK  344 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSS
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE---eCCCCEEecccceeeecCC
Confidence            9999999999999999998999999999999999999999999999999999999999   6788999999999988765


Q ss_pred             CceecccccCCcccCccccC-CCCCCCcCchHHHHHHHHHHhhCCCCCCCCC---hHHHHHHHHccccCCCCCCCCCCCH
Q 048594          172 GKVYEEVVGTPLYMAPELLG-PCKYGKEIDIWSAGLILYNLLSGAQPFWAES---LYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      .. ..+.+||+.|||||++. +..|+.++|||||||++|+|++|.+||.+.+   .......+....+.++    ..+|+
T Consensus       345 ~~-~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p----~~~S~  419 (689)
T 3v5w_A          345 KK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSP  419 (689)
T ss_dssp             CC-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC----TTSCH
T ss_pred             CC-CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC----ccCCH
Confidence            43 35679999999999996 4579999999999999999999999997643   3344555555554443    57899


Q ss_pred             HHHHHHHHhCccCCCCCCC-----HHHHHcCCcCCCC
Q 048594          248 SAKDLIRRMLIRDPNNQIT-----VAQILKHPWLNYE  279 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t-----~~e~L~h~~~~~~  279 (483)
                      ++++||.+||++||.+|++     ++|+++||||+.-
T Consensus       420 ~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          420 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             HHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             HHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence            9999999999999999998     7999999999843

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=6.8e-49  Score=382.33  Aligned_cols=220  Identities=27%  Similarity=0.435  Sum_probs=172.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------------
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------------   89 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------------   89 (483)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.......                                       
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            46999999999999999999999999999999997543110                                       


Q ss_pred             ----cCeEEEeccCCCChHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEee
Q 048594           90 ----EGYLKREHCDGGTLVDRISDRER---YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD  162 (483)
Q Consensus        90 ----~~~lv~E~~~g~~L~~~l~~~~~---l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~D  162 (483)
                          ..|+|||||.||+|.+++.....   .++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl---~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEE---CCCCcEEEcc
Confidence                02799999999999999987754   4556789999999999999999999999999999999   6678999999


Q ss_pred             cccceeccCCce-------------ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH-HHHH
Q 048594          163 FGLAFFFEEGKV-------------YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY-GTLT  228 (483)
Q Consensus       163 fg~a~~~~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~-~~~~  228 (483)
                      ||+|+.+.....             ....+||+.|||||++.+..|+.++|||||||++|+|++   ||.+.... ..+.
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~  238 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT  238 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHH
Confidence            999987653321             233579999999999999999999999999999999996   88653322 2233


Q ss_pred             HHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          229 AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       229 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+.....  + +.++..++.+.+||.+||++||.+|||+.|+|+||||+
T Consensus       239 ~~~~~~~--p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~  284 (299)
T 4g31_A          239 DVRNLKF--P-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFE  284 (299)
T ss_dssp             HHHTTCC--C-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHhcCCC--C-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhC
Confidence            3333221  1 12234567889999999999999999999999999997

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=6.9e-48  Score=396.24  Aligned_cols=293  Identities=33%  Similarity=0.576  Sum_probs=243.1

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------CcC
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------DEG   91 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------~~~   91 (483)
                      ...+.++|.+.+.||+|+||+||+|.++.+|+.+|+|++......                                ...
T Consensus         6 ~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   85 (444)
T 3soa_A            6 CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHH   85 (444)
T ss_dssp             -CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEE
T ss_pred             cccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEE
Confidence            346788999999999999999999999999999999999765421                                111


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+|||||.||+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+..+...+.+||+|||++.....
T Consensus        86 ~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~  165 (444)
T 3soa_A           86 YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG  165 (444)
T ss_dssp             EEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred             EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence            99999999999999999999999999999999999999999999999999999999997655678899999999987654


Q ss_pred             Cc-eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          172 GK-VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       172 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      .. .....+||+.|+|||++.+..++.++||||+||++|+|++|.+||.+.+.......+..+...++.+.|+.+++++.
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  245 (444)
T 3soa_A          166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK  245 (444)
T ss_dssp             TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred             CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHH
Confidence            32 23456899999999999988899999999999999999999999999999999999999999998888999999999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCCCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHhhh--cc--chHHHhhHH
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVE--NL--PAEEIQKHK  326 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~l~~i~~--~~--~~~~~~~l~  326 (483)
                      +||.+||+.||.+|||+.|+|+||||+..... .........+..+++|.+.++++..++..+..  .+  ..+++..+.
T Consensus       246 ~li~~~L~~dP~~Rpta~e~L~hp~~~~~~~~-~~~~~~~~~~~~l~~~~~~~klk~~~~~~~~~~~~~~~~~~e~~~~~  324 (444)
T 3soa_A          246 DLINKMLTINPSKRITAAEALKHPWISHRSTV-ASCMHRQETVDCLKKFNARRKLKGAILTVMLATRNFSVRKQEIIKVT  324 (444)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHHSCTTHHHHHH-SCCCCCHHHHHHHHHHHHHHHHHTTCSCEECCCCSCCHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCCCHHHHhcCccccCCccc-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHH
Confidence            99999999999999999999999999732211 12223356778899999999998887776532  22  234444444


Q ss_pred             HHHhhcCCCCC
Q 048594          327 ETFKQMDTNDS  337 (483)
Q Consensus       327 ~~F~~~D~d~~  337 (483)
                      +.|-....++|
T Consensus       325 ~~~l~~i~~gD  335 (444)
T 3soa_A          325 EQLIEAISNGD  335 (444)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHhhhhcCC
Confidence            44444443333

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=3.1e-47  Score=381.95  Aligned_cols=272  Identities=35%  Similarity=0.611  Sum_probs=234.0

Q ss_pred             ccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------
Q 048594           42 KAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------   89 (483)
Q Consensus        42 ~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------   89 (483)
                      .....+.++|.+.+.||+|+||.||+|.++.+|+.||+|++.......                                
T Consensus        22 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~  101 (362)
T 2bdw_A           22 NASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES  101 (362)
T ss_dssp             --CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             cCCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC
Confidence            344577889999999999999999999999999999999997653211                                


Q ss_pred             cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           90 EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ..|+|||||.|++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+..++..+.+||+|||++...
T Consensus       102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~  181 (362)
T 2bdw_A          102 FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  181 (362)
T ss_dssp             EEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred             EEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence            11899999999999999998889999999999999999999999999999999999999976555567999999999887


Q ss_pred             cCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          170 EEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      .........+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.......+..+...++.+.|+.+++++
T Consensus       182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  261 (362)
T 2bdw_A          182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA  261 (362)
T ss_dssp             TTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHH
T ss_pred             cCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence            66555566789999999999998889999999999999999999999999999989999999988888887788899999


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcCCcCCCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHhh
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIV  314 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~l~~i~  314 (483)
                      ++||.+||..||.+|||+.++|+||||..... .............+++|....+++..++..++
T Consensus       262 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  325 (362)
T 2bdw_A          262 KSLIDSMLTVNPKKRITADQALKVPWICNRER-VASAIHRQDTVDCLKKFNARRKLKGAILTTMI  325 (362)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHTTSHHHHTHHH-HSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHhcCcccCCCcc-cccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999973211 11222334567788888888888877665543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=2.6e-46  Score=374.69  Aligned_cols=234  Identities=34%  Similarity=0.614  Sum_probs=211.5

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc---------------------------------
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE---------------------------------   90 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~---------------------------------   90 (483)
                      ...+.++|.+.+.||+|+||+||+|.++.+|+.||+|++.+......                                 
T Consensus         7 ~~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~   86 (361)
T 2yab_A            7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN   86 (361)
T ss_dssp             CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             CCChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe
Confidence            45788899999999999999999999999999999999987543211                                 


Q ss_pred             ---CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCC-CCcEEEeecccc
Q 048594           91 ---GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE-NATLKATDFGLA  166 (483)
Q Consensus        91 ---~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~-~~~ikl~Dfg~a  166 (483)
                         .|+|||||.|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+..++. ...+||+|||++
T Consensus        87 ~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a  166 (361)
T 2yab_A           87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (361)
T ss_dssp             SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence               0999999999999999998889999999999999999999999999999999999999953221 237999999999


Q ss_pred             eeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          167 FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ............+||+.|+|||++.+..++.++||||+||++|+|++|.+||.+.+....+..+......++...++.++
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  246 (361)
T 2yab_A          167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS  246 (361)
T ss_dssp             EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred             eEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCC
Confidence            98776655567789999999999998889999999999999999999999999999999999999888877766677899


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +++++||.+||.+||.+|||+.|+|+||||+
T Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  277 (361)
T 2yab_A          247 ELAKDFIRKLLVKETRKRLTIQEALRHPWIT  277 (361)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence            9999999999999999999999999999998

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.3e-46  Score=366.05  Aligned_cols=219  Identities=21%  Similarity=0.373  Sum_probs=177.6

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeEEEe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYLKRE   96 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~lv~E   96 (483)
                      .+++.+.+.||+|+||+||+|+++.   .+|||+++.....                               +..|||||
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmE  111 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQ  111 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEE
Confidence            3678899999999999999998653   5999998754321                               12299999


Q ss_pred             ccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC---
Q 048594           97 HCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG---  172 (483)
Q Consensus        97 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~---  172 (483)
                      ||+||+|.++|... .++++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+.....   
T Consensus       112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl---~~~~~~Ki~DFGla~~~~~~~~~  188 (307)
T 3omv_A          112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLATVKSRWSGS  188 (307)
T ss_dssp             CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEE---ETTEEEEECCCSSCBC-------
T ss_pred             cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEE---CCCCcEEEeeccCceecccCCcc
Confidence            99999999999754 679999999999999999999999999999999999999   56789999999999876432   


Q ss_pred             ceecccccCCcccCccccCC---CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC--CCCCCCCCH
Q 048594          173 KVYEEVVGTPLYMAPELLGP---CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK--SDPWPTISS  247 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~  247 (483)
                      ......+||+.|||||++.+   ..|+.++|||||||++|||+||+.||.+.+....+..+.......+  ...++.+|+
T Consensus       189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  268 (307)
T 3omv_A          189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK  268 (307)
T ss_dssp             -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCH
T ss_pred             eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchH
Confidence            22345689999999999853   3588999999999999999999999988766555554444333222  223467899


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ++.+||.+||+.||.+|||+.|+++
T Consensus       269 ~l~~li~~cl~~dP~~RPs~~ei~~  293 (307)
T 3omv_A          269 AMKRLVADCVKKVKEERPLFPQILS  293 (307)
T ss_dssp             HHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            9999999999999999999998754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=6.4e-47  Score=367.92  Aligned_cols=221  Identities=21%  Similarity=0.321  Sum_probs=186.4

Q ss_pred             cceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCC------------------------------CCcCeE
Q 048594           49 LHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSK------------------------------SDEGYL   93 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~------------------------------~~~~~l   93 (483)
                      ++|.+.+.||+|+||+||+|++.     .++..||||++.....                              .+..||
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            57999999999999999999875     4688999999976431                              111299


Q ss_pred             EEeccCCCChHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEE
Q 048594           94 KREHCDGGTLVDRISDR-------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA  160 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~-------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl  160 (483)
                      |||||+||+|.++|...             .++++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl---~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE---CCCCcEEE
Confidence            99999999999999764             369999999999999999999999999999999999999   67789999


Q ss_pred             eecccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccC
Q 048594          161 TDFGLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREID  236 (483)
Q Consensus       161 ~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~  236 (483)
                      +|||+|+........   ....||+.|||||++.+..|+.++||||+||++|||+| |+.||.+.+..+....+..+...
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~  249 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL  249 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCC
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC
Confidence            999999866443222   23468999999999998899999999999999999998 99999999988888888876532


Q ss_pred             CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          237 FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       237 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .   .++.+|+++.+||.+||+.||++|||+.+++  +|+.
T Consensus       250 ~---~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~--~~L~  285 (299)
T 4asz_A          250 Q---RPRTCPQEVYELMLGCWQREPHMRKNIKGIH--TLLQ  285 (299)
T ss_dssp             C---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH--HHHH
T ss_pred             C---CCccchHHHHHHHHHHcCCChhHCcCHHHHH--HHHH
Confidence            1   2256899999999999999999999999984  4554

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=5.3e-45  Score=363.98  Aligned_cols=270  Identities=36%  Similarity=0.622  Sum_probs=216.5

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------cCeEE
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------EGYLK   94 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------~~~lv   94 (483)
                      ....+.++|.+.+.||+|+||+||+|.++.+++.||||++.......                            ..|+|
T Consensus        47 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  126 (349)
T 2w4o_A           47 NRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV  126 (349)
T ss_dssp             BCSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence            34567889999999999999999999999999999999997653211                            11899


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      ||||.|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+..+.+||+|||++........
T Consensus       127 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~  206 (349)
T 2w4o_A          127 LELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL  206 (349)
T ss_dssp             ECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred             EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence            99999999999999888899999999999999999999999999999999999996544578999999999987665544


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHH-HHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG-TLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+..... ....+......++.+.++.++.++.+||
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  286 (349)
T 2w4o_A          207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLV  286 (349)
T ss_dssp             ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHH
T ss_pred             cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHH
Confidence            556789999999999998889999999999999999999999998765544 6677777777766666788999999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcCCCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHhhh
Q 048594          254 RRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVE  315 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~l~~i~~  315 (483)
                      .+||..||.+|||+.++|+||||......   ..........++.+....++++......+.
T Consensus       287 ~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (349)
T 2w4o_A          287 RKLIVLDPKKRLTTFQALQHPWVTGKAAN---FVHMDTAQKKLQEFNARRKLKAAVKAVVAS  345 (349)
T ss_dssp             HTTSCSSGGGSCCHHHHHHSTTTTSTTCC---CSCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHccCChhhCcCHHHHhcCcccCCCccc---hhhhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999833221   122355667788888888888776665543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=6.3e-46  Score=365.78  Aligned_cols=220  Identities=18%  Similarity=0.266  Sum_probs=180.8

Q ss_pred             ccceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCC------------------------------CCcCe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSK------------------------------SDEGY   92 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~------------------------------~~~~~   92 (483)
                      .++|.+.+.||+|+||+||+|.++     .++..||||++.....                              ....|
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~  119 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL  119 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            357899999999999999999865     4688999999976431                              11129


Q ss_pred             EEEeccCCCChHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCc
Q 048594           93 LKREHCDGGTLVDRISDR---------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENAT  157 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~---------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~  157 (483)
                      ||||||++|+|.+++...               +++++..+..++.||+.||.|||+++|+||||||+|||+   +.++.
T Consensus       120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl---~~~~~  196 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV---GQGLV  196 (329)
T ss_dssp             EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTTE
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE---CCCCc
Confidence            999999999999999753               469999999999999999999999999999999999999   57789


Q ss_pred             EEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHcc
Q 048594          158 LKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSR  233 (483)
Q Consensus       158 ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~  233 (483)
                      +||+|||+|+.+.....   ....+||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+..+.+..+..+
T Consensus       197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g  276 (329)
T 4aoj_A          197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG  276 (329)
T ss_dssp             EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHT
T ss_pred             EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            99999999987643322   234579999999999999999999999999999999999 99999999888888888765


Q ss_pred             ccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          234 EIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ...   +.++.+|+++.+|+.+||+.||++|||+.|++++
T Consensus       277 ~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          277 REL---ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             CCC---CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             CCC---CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            421   2224689999999999999999999999999763

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=5.6e-46  Score=362.80  Aligned_cols=219  Identities=19%  Similarity=0.244  Sum_probs=186.5

Q ss_pred             cceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCCCC-------------------------------cCe
Q 048594           49 LHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSKSD-------------------------------EGY   92 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~-------------------------------~~~   92 (483)
                      ..+++.+.||+|+||+||+|...     .+++.||||++.......                               ..|
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            56889999999999999999853     467899999997543211                               119


Q ss_pred             EEEeccCCCChHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCC
Q 048594           93 LKREHCDGGTLVDRISDR----------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA  156 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~  156 (483)
                      ||||||++|+|.++|...                ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl---~~~~  182 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV---YDKL  182 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGG
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE---CCCC
Confidence            999999999999999643                358999999999999999999999999999999999999   6778


Q ss_pred             cEEEeecccceeccCCc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHc
Q 048594          157 TLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMS  232 (483)
Q Consensus       157 ~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~  232 (483)
                      .+||+|||+|+.+....   .....+||+.|||||++.+..|+.++|||||||++|||+| |..||.+.+..+....+..
T Consensus       183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~  262 (308)
T 4gt4_A          183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN  262 (308)
T ss_dssp             CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHT
T ss_pred             CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            99999999998764332   2234579999999999998899999999999999999998 8999999998888888877


Q ss_pred             cccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          233 REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      +...   +.++.+|+++.+|+.+||+.||.+|||+.|++++
T Consensus       263 ~~~~---~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          263 RQVL---PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             TCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCC---CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            6432   2235789999999999999999999999999875

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=3.6e-45  Score=361.97  Aligned_cols=226  Identities=33%  Similarity=0.569  Sum_probs=203.5

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------CcCeE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------DEGYL   93 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------~~~~l   93 (483)
                      ....+|.+++.||+|+||.||+|.+..+|+.||||++.+....                                ...|+
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   91 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL   91 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence            4456899999999999999999999999999999999764321                                11199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |||||+|++|.+++...+++++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.......
T Consensus        92 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~  168 (328)
T 3fe3_A           92 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGG  168 (328)
T ss_dssp             EECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTCCGGGSSSC
T ss_pred             EEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE---cCCCCEEEeeccCceecCCCC
Confidence            99999999999999888899999999999999999999999999999999999999   677899999999998776666


Q ss_pred             eecccccCCcccCccccCCCCCC-CcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYG-KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      .....+||+.|+|||++.+..+. .++||||+||++|+|++|..||.+.+.......+..+....+    ..+++++.+|
T Consensus       169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l  244 (328)
T 3fe3_A          169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENL  244 (328)
T ss_dssp             GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred             ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence            66678899999999999887764 799999999999999999999999998888888888766554    3578999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      |.+||..||.+|||++|+|+||||+.
T Consensus       245 i~~~L~~dP~~R~t~~eil~h~~~~~  270 (328)
T 3fe3_A          245 LKRFLVLNPIKRGTLEQIMKDRWINA  270 (328)
T ss_dssp             HHHHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred             HHHHCCCChhHCcCHHHHhcCHhhcC
Confidence            99999999999999999999999984

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-46  Score=371.00  Aligned_cols=232  Identities=31%  Similarity=0.534  Sum_probs=209.3

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKRE   96 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E   96 (483)
                      ++.++|.+.+.||+|+||+||+|.++.+|+.+|+|++......                             ...|+|||
T Consensus         2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            5778999999999999999999999999999999998754311                             11199999


Q ss_pred             ccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           97 HCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      ||+|++|.+++... .++++..+..++.||+.||.|||++||+||||||+|||+..+ ..+.+||+|||++.........
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-~~~~~kl~Dfg~a~~~~~~~~~  160 (321)
T 1tki_A           82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCEECCTTCEE
T ss_pred             eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-CCCCEEEEECCCCeECCCCCcc
Confidence            99999999999765 479999999999999999999999999999999999999532 2678999999999988776666


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....||+.|+|||++.+..++.++||||+||++|+|++|..||.+.........+......++...++.+|+++.+||.+
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  240 (321)
T 1tki_A          161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR  240 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHT
T ss_pred             ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHH
Confidence            67789999999999988778999999999999999999999999999999999999888877766677899999999999


Q ss_pred             hCccCCCCCCCHHHHHcCCcCCC
Q 048594          256 MLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      ||..||.+|||+.|+|+||||+.
T Consensus       241 ~L~~dp~~Rpt~~e~l~hp~~~~  263 (321)
T 1tki_A          241 LLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             TSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             HcCCChhHCcCHHHHhcChhhcc
Confidence            99999999999999999999983

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=5.9e-46  Score=369.00  Aligned_cols=220  Identities=19%  Similarity=0.267  Sum_probs=183.8

Q ss_pred             ccceEEeeeecccCceeEEEEEECCC-----CCEEEEEEeccCCC---------------------------------CC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENST-----GLQFACKSISKTSK---------------------------------SD   89 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~avK~~~~~~~---------------------------------~~   89 (483)
                      .++|++.+.||+|+||+||+|.+..+     ++.||||.+.....                                 ..
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~  142 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  142 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence            47899999999999999999997654     36899999865421                                 11


Q ss_pred             cCeEEEeccCCCChHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC
Q 048594           90 EGYLKREHCDGGTLVDRISDR----------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD  153 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~  153 (483)
                      ..|||||||++|+|.++|...                ..+++..+..++.||+.||.|||+++|+||||||+|||+   +
T Consensus       143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl---~  219 (353)
T 4ase_A          143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---S  219 (353)
T ss_dssp             CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---C
T ss_pred             EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceee---C
Confidence            129999999999999999753                348999999999999999999999999999999999999   6


Q ss_pred             CCCcEEEeecccceeccCCc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHH-HHH
Q 048594          154 ENATLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYG-TLT  228 (483)
Q Consensus       154 ~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~-~~~  228 (483)
                      .++.+||+|||+|+.+....   .....+||+.|||||++.+..|+.++|||||||++|||+| |..||.+..... ...
T Consensus       220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~  299 (353)
T 4ase_A          220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR  299 (353)
T ss_dssp             GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH
T ss_pred             CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            67899999999998764332   2234678999999999998899999999999999999998 999998866444 444


Q ss_pred             HHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          229 AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       229 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .+..+ ...+  ..+.+++++.++|.+||+.||.+|||+.|+++|
T Consensus       300 ~i~~g-~~~~--~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          300 RLKEG-TRMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHHT-CCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcC-CCCC--CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            44443 2222  224689999999999999999999999999986

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=2.2e-45  Score=368.43  Aligned_cols=229  Identities=31%  Similarity=0.464  Sum_probs=181.4

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-----------------------------CeEEEe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-----------------------------GYLKRE   96 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-----------------------------~~lv~E   96 (483)
                      ...++|.+++.||+|+||+||+|.++.+|+.||+|++........                             .|+|||
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            445789999999999999999999999999999999976542211                             189999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE  176 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~  176 (483)
                      ||.|++|.+++...+++++..++.++.||+.||.|||++||+||||||+|||+..+ ..+.+||+|||++..........
T Consensus        97 ~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~-~~~~~kl~Dfg~a~~~~~~~~~~  175 (361)
T 3uc3_A           97 YASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSVLHSQPK  175 (361)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSS-SSCCEEECCCCCC----------
T ss_pred             eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC-CCceEEEeecCccccccccCCCC
Confidence            99999999999888899999999999999999999999999999999999999421 23359999999998654444445


Q ss_pred             ccccCCcccCccccCCCCCCCc-CchHHHHHHHHHHhhCCCCCCCCCh----HHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          177 EVVGTPLYMAPELLGPCKYGKE-IDIWSAGLILYNLLSGAQPFWAESL----YGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~-~DiwslGvil~~ll~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      ..+||+.|+|||++.+..++.+ +|||||||++|+|++|..||.+...    ......+......++  ....+++++++
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~  253 (361)
T 3uc3_A          176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP--DDIRISPECCH  253 (361)
T ss_dssp             -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCC--TTSCCCHHHHH
T ss_pred             CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCC--CcCCCCHHHHH
Confidence            6689999999999987777554 8999999999999999999987543    344444544444333  23468999999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||.+||+.||.+|||+.|+++||||.
T Consensus       254 li~~~L~~dP~~Rps~~ell~hp~f~  279 (361)
T 3uc3_A          254 LISRIFVADPATRISIPEIKTHSWFL  279 (361)
T ss_dssp             HHHHHSCSCTTTSCCHHHHHTSHHHH
T ss_pred             HHHHHccCChhHCcCHHHHHhCcchh
Confidence            99999999999999999999999996

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.9e-45  Score=359.35  Aligned_cols=233  Identities=36%  Similarity=0.626  Sum_probs=207.7

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc----------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE----------------------------------   90 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------------------------------   90 (483)
                      +.+.++|.+.+.||+|+||.||+|.++.+|+.||+|++........                                  
T Consensus         7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   86 (326)
T 2y0a_A            7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK   86 (326)
T ss_dssp             SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            4677899999999999999999999999999999999976542210                                  


Q ss_pred             --CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC-CCCcEEEeecccce
Q 048594           91 --GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD-ENATLKATDFGLAF  167 (483)
Q Consensus        91 --~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~-~~~~ikl~Dfg~a~  167 (483)
                        .|+|||||+|++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++..++ ....+||+|||++.
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  166 (326)
T 2y0a_A           87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  166 (326)
T ss_dssp             SEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence              199999999999999999888999999999999999999999999999999999999995332 22379999999998


Q ss_pred             eccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      ...........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+......+..+......++...++.+++
T Consensus       167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (326)
T 2y0a_A          167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA  246 (326)
T ss_dssp             ECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCH
T ss_pred             ECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCH
Confidence            87655555667899999999999988899999999999999999999999999988888888887776666555678899


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+.+||.+||..||.+|||+.++|+||||+
T Consensus       247 ~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  276 (326)
T 2y0a_A          247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIK  276 (326)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHSTTTS
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcCCCcc
Confidence            999999999999999999999999999997

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.9e-45  Score=367.55  Aligned_cols=267  Identities=33%  Similarity=0.578  Sum_probs=213.0

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-----------------------------------CCc
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-----------------------------------SDE   90 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----------------------------------~~~   90 (483)
                      .+.++|.+.+.||+|+||+||+|.++.+|+.||||++.....                                   ...
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  100 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM  100 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            456789999999999999999999999999999999864210                                   001


Q ss_pred             CeEEEeccCCCChHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           91 GYLKREHCDGGTLVDRISDR----ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~----~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                      .|+|||||+|++|.+.+...    ..+++..+..++.||+.||.|||++||+||||||+|||+..++....+||+|||++
T Consensus       101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            19999999999999887543    35899999999999999999999999999999999999975555567999999999


Q ss_pred             eeccCCce-ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCC
Q 048594          167 FFFEEGKV-YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       167 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      ........ ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+. .......+..+...++...++.+
T Consensus       181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~~~~  259 (351)
T 3c0i_A          181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYKMNPRQWSHI  259 (351)
T ss_dssp             EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTCCCCCHHHHTTS
T ss_pred             eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCCCCCCccccccC
Confidence            87754432 34567999999999999888999999999999999999999999875 45666777777666655556788


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHhh
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIV  314 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~l~~i~  314 (483)
                      ++++++||.+||..||.+|||+.++|+||||+.......... .......++++....+++..++..++
T Consensus       260 s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~  327 (351)
T 3c0i_A          260 SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIH-LPETVEQLRKFNARRKLKGAVLAAVS  327 (351)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHHHHSCCSC-CHHHHHHHHHHHHHHC----------
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCcccccccc-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999984322222222 24556778888777777776665554

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.5e-44  Score=358.74  Aligned_cols=223  Identities=30%  Similarity=0.530  Sum_probs=199.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|.+++.||+|+||.||+|.++.+|+.||+|++.+...                                 ....|+||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            579999999999999999999999999999999975320                                 11119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCce
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~~  174 (483)
                      |||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... ....
T Consensus        85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~~  161 (337)
T 1o6l_A           85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTCC
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE---CCCCCEEEeeccchhhcccCCCc
Confidence            999999999999988899999999999999999999999999999999999999   677899999999997643 3334


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....+||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.+.......+......++    ..+++++++||.
T Consensus       162 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~  237 (337)
T 1o6l_A          162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLLA  237 (337)
T ss_dssp             BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHH
T ss_pred             ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence            4567899999999999988899999999999999999999999999988888888887766554    368999999999


Q ss_pred             HhCccCCCCCC-----CHHHHHcCCcCCC
Q 048594          255 RMLIRDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       255 ~~L~~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      +||++||.+||     +++++++||||..
T Consensus       238 ~lL~~dP~~R~g~~~~~~~ei~~h~~f~~  266 (337)
T 1o6l_A          238 GLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             HHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             HHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence            99999999999     9999999999983

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=3.1e-45  Score=365.97  Aligned_cols=224  Identities=29%  Similarity=0.515  Sum_probs=195.9

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCC----------------------------------CCCcCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS----------------------------------KSDEGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~----------------------------------~~~~~~l   93 (483)
                      .++|.+++.||+|+||+||+|+++.+|+.||||++.+..                                  .....|+
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            367999999999999999999999999999999987531                                  0111199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CC
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~  172 (483)
                      |||||.||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++.... ..
T Consensus       102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl---~~~g~ikL~DFG~a~~~~~~~  178 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNG  178 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCC--
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE---CCCCCEEEccccceeecccCC
Confidence            99999999999999988899999999999999999999999999999999999999   677899999999998643 23


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.......+......++    ..+++++.+|
T Consensus       179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l  254 (353)
T 3txo_A          179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWLHEDATGI  254 (353)
T ss_dssp             -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred             ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHH
Confidence            334567899999999999888899999999999999999999999999999999999998877655    3589999999


Q ss_pred             HHHhCccCCCCCCCH------HHHHcCCcCCC
Q 048594          253 IRRMLIRDPNNQITV------AQILKHPWLNY  278 (483)
Q Consensus       253 i~~~L~~dP~~R~t~------~e~L~h~~~~~  278 (483)
                      |.+||.+||.+||++      .++++||||+.
T Consensus       255 i~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~  286 (353)
T 3txo_A          255 LKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE  286 (353)
T ss_dssp             HHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred             HHHHhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence            999999999999999      89999999984

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=7.2e-45  Score=361.87  Aligned_cols=234  Identities=29%  Similarity=0.563  Sum_probs=205.5

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------cCeEEEe
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------EGYLKRE   96 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------~~~lv~E   96 (483)
                      ...+.++|.+.+.||+|+||.||+|.++.+|+.||||++.+.....                           ..|+|||
T Consensus        17 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           17 SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             --CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            3467889999999999999999999999999999999997654211                           1199999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC-CCCcEEEeecccceeccCC-ce
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD-ENATLKATDFGLAFFFEEG-KV  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~-~~~~ikl~Dfg~a~~~~~~-~~  174 (483)
                      ||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+ ..+.+||+|||++...... ..
T Consensus        97 ~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~  176 (342)
T 2qr7_A           97 LMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL  176 (342)
T ss_dssp             CCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc
Confidence            999999999999988999999999999999999999999999999999999996432 2356999999999876543 33


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCC---CChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA---ESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+   .........+..+...++...|+.+++++++
T Consensus       177 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  256 (342)
T 2qr7_A          177 LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD  256 (342)
T ss_dssp             BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHH
T ss_pred             eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHH
Confidence            4456899999999999877788999999999999999999999986   4556778888888888877778899999999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||.+||..||.+|||+.++|+||||.
T Consensus       257 li~~~L~~dP~~R~t~~~il~hp~~~  282 (342)
T 2qr7_A          257 LVSKMLHVDPHQRLTAALVLRHPWIV  282 (342)
T ss_dssp             HHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred             HHHHHCCCChhHCcCHHHHhcCCeec
Confidence            99999999999999999999999996

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=3.7e-44  Score=346.87  Aligned_cols=235  Identities=37%  Similarity=0.672  Sum_probs=212.6

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCe
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGY   92 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~   92 (483)
                      ..+.++|.+.+.||+|+||.||+|.++.+|+.||+|++.......                                ..|
T Consensus         2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (284)
T 3kk8_A            2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY   81 (284)
T ss_dssp             CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEE
Confidence            357889999999999999999999999999999999987643211                                118


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|||||.|++|.+.+.....+++..+..++.||+.||.|||++||+||||||+||++..++..+.+||+|||.+......
T Consensus        82 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  161 (284)
T 3kk8_A           82 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  161 (284)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence            99999999999999988889999999999999999999999999999999999999975555567999999999887766


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      .......||+.|+|||++.+..++.++||||+|+++|+|++|..||.+.........+......++.+.++.+++++.+|
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  241 (284)
T 3kk8_A          162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL  241 (284)
T ss_dssp             CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHH
T ss_pred             ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHH
Confidence            55566789999999999998889999999999999999999999999999999999998888888887788999999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                      |.+||++||.+|||+.|+|+||||...
T Consensus       242 i~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (284)
T 3kk8_A          242 IDSMLTVNPKKRITADQALKVPWICNR  268 (284)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred             HHHHcccChhhCCCHHHHhcCccccCC
Confidence            999999999999999999999999843

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=4.3e-44  Score=362.27  Aligned_cols=224  Identities=25%  Similarity=0.473  Sum_probs=195.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------------cCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------------EGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~l   93 (483)
                      .++|.++++||+|+||+||+|+++.+++.||+|++.+.....                                  ..|+
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            368999999999999999999999999999999997653211                                  1199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee-ccCC
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF-FEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~-~~~~  172 (483)
                      |||||.||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++.. ....
T Consensus       131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~  207 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPG  207 (396)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTT
T ss_pred             EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---CCCCCEEEeecceeeecccCC
Confidence            99999999999999988899999999999999999999999999999999999999   6778999999999986 3344


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCC---------ChHHHHHHHHccccCCCCCCCC
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE---------SLYGTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~  243 (483)
                      ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.         ........+....+.++    +
T Consensus       208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~  283 (396)
T 4dc2_A          208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----R  283 (396)
T ss_dssp             CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCC----T
T ss_pred             CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCC----C
Confidence            4456678999999999999989999999999999999999999999642         22335566666655544    3


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCH------HHHHcCCcCCC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITV------AQILKHPWLNY  278 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~------~e~L~h~~~~~  278 (483)
                      .+++++++||.+||++||.+||++      +|+++||||+.
T Consensus       284 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~  324 (396)
T 4dc2_A          284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  324 (396)
T ss_dssp             TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred             cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence            689999999999999999999985      79999999984

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=6.9e-44  Score=360.36  Aligned_cols=235  Identities=31%  Similarity=0.526  Sum_probs=209.3

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------CCcCeE
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------SDEGYL   93 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------~~~~~l   93 (483)
                      ...+.++|.+.+.||+|+||+||+|.++.+|+.+|+|++.....                              ....|+
T Consensus        46 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  125 (387)
T 1kob_A           46 QGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL  125 (387)
T ss_dssp             CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred             CCccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence            34567899999999999999999999999999999999976421                              111299


Q ss_pred             EEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |||||.|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+..+ ..+.+||+|||++......
T Consensus       126 v~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~~~vkL~DFG~a~~~~~~  204 (387)
T 1kob_A          126 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLATKLNPD  204 (387)
T ss_dssp             EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TCCCEEECCCTTCEECCTT
T ss_pred             EEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecC-CCCceEEEecccceecCCC
Confidence            99999999999999765 479999999999999999999999999999999999999532 3467999999999987766


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+......++...++.+++++++|
T Consensus       205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  284 (387)
T 1kob_A          205 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF  284 (387)
T ss_dssp             SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHH
T ss_pred             cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHH
Confidence            55556789999999999998889999999999999999999999999999888888888888777777778899999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                      |.+||..||.+|||+.++|+||||+..
T Consensus       285 i~~~L~~dP~~Rpt~~ell~hp~~~~~  311 (387)
T 1kob_A          285 IKNLLQKEPRKRLTVHDALEHPWLKGD  311 (387)
T ss_dssp             HHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             HHHHcCCChhHCcCHHHHhhCccccCC
Confidence            999999999999999999999999843

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=8.3e-44  Score=358.01  Aligned_cols=224  Identities=27%  Similarity=0.484  Sum_probs=200.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------------cCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------------EGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~l   93 (483)
                      .++|.+++.||+|+||.||+|+++.+++.||+|++.+.....                                  ..|+
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            468999999999999999999999999999999997643110                                  0199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CC
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~  172 (483)
                      |||||.||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... ..
T Consensus       117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~ikL~DFG~a~~~~~~~  193 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHN  193 (373)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCBCGGGBCCC
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEeeCccccccccCC
Confidence            99999999999999988899999999999999999999999999999999999999   677899999999997643 33


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ......+||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.+.......+......++    +.++.++++|
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~l  269 (373)
T 2r5t_A          194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHL  269 (373)
T ss_dssp             CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCC----SSSCHHHHHH
T ss_pred             CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC----CCCCHHHHHH
Confidence            344567899999999999998999999999999999999999999999998899999888766554    4689999999


Q ss_pred             HHHhCccCCCCCCCH----HHHHcCCcCCC
Q 048594          253 IRRMLIRDPNNQITV----AQILKHPWLNY  278 (483)
Q Consensus       253 i~~~L~~dP~~R~t~----~e~L~h~~~~~  278 (483)
                      |.+||++||.+||++    .++++||||+.
T Consensus       270 i~~lL~~dp~~R~~~~~~~~~i~~h~~f~~  299 (373)
T 2r5t_A          270 LEGLLQKDRTKRLGAKDDFMEIKSHVFFSL  299 (373)
T ss_dssp             HHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred             HHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence            999999999999987    69999999984

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=2.7e-44  Score=359.03  Aligned_cols=224  Identities=28%  Similarity=0.496  Sum_probs=200.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~l   93 (483)
                      .++|.+++.||+|+||.||+|.++.+|+.||+|++.+...                                  ....|+
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            3679999999999999999999999999999999875310                                  011199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CC
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~  172 (483)
                      |||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... ..
T Consensus        99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~  175 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDG  175 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTT
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---cCCCcEEEEeCCcccccccCC
Confidence            99999999999999988899999999999999999999999999999999999999   677899999999998643 23


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ......+||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.+.......+......++    ..+++++++|
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l  251 (353)
T 2i0e_A          176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAI  251 (353)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred             cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence            344567899999999999988999999999999999999999999999999899999988776654    3689999999


Q ss_pred             HHHhCccCCCCCCC-----HHHHHcCCcCCC
Q 048594          253 IRRMLIRDPNNQIT-----VAQILKHPWLNY  278 (483)
Q Consensus       253 i~~~L~~dP~~R~t-----~~e~L~h~~~~~  278 (483)
                      |.+||.+||.+||+     ++++++||||+.
T Consensus       252 i~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          252 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             HHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             HHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence            99999999999994     699999999983

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2e-44  Score=358.85  Aligned_cols=225  Identities=28%  Similarity=0.466  Sum_probs=200.2

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~l   93 (483)
                      .++|.+.+.||+|+||.||+|+++.+|+.||+|++.+...                                  ....|+
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l   95 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   95 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence            4689999999999999999999999999999999975320                                  011199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-C
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-G  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~  172 (483)
                      |||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... .
T Consensus        96 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~  172 (345)
T 1xjd_A           96 VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGD  172 (345)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTT
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE---CCCCCEEEeEChhhhhcccCC
Confidence            99999999999999988899999999999999999999999999999999999999   6778999999999986432 2


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ......+||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.+.......+......++    ..+++++++|
T Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l  248 (345)
T 1xjd_A          173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDL  248 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred             CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCC----cccCHHHHHH
Confidence            334567899999999999988899999999999999999999999999998888888887765544    3689999999


Q ss_pred             HHHhCccCCCCCCCHH-HHHcCCcCCCC
Q 048594          253 IRRMLIRDPNNQITVA-QILKHPWLNYE  279 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~-e~L~h~~~~~~  279 (483)
                      |.+||..||.+|||+. ++++||||+..
T Consensus       249 i~~lL~~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          249 LVKLFVREPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             HHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             HHHHhcCCHhHcCCChHHHHcCccccCC
Confidence            9999999999999998 99999999843

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=5e-44  Score=353.69  Aligned_cols=245  Identities=27%  Similarity=0.472  Sum_probs=210.4

Q ss_pred             ccccccccccccceEEe-eeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------
Q 048594           38 TILGKAYEDIKLHFTIA-EELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------   89 (483)
Q Consensus        38 ~~~~~~~~~i~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------   89 (483)
                      -+..+..+.|.++|.+. +.||+|+||+||+|.++.+|+.||+|++.......                           
T Consensus        17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~   96 (327)
T 3lm5_A           17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE   96 (327)
T ss_dssp             CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence            34455567899999998 89999999999999999999999999987643211                           


Q ss_pred             ------cCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEe
Q 048594           90 ------EGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKAT  161 (483)
Q Consensus        90 ------~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~  161 (483)
                            ..|+|||||.|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||++......+.+||+
T Consensus        97 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~  176 (327)
T 3lm5_A           97 VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIV  176 (327)
T ss_dssp             EEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred             EEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEe
Confidence                  118999999999999998654  679999999999999999999999999999999999999643346899999


Q ss_pred             ecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCC
Q 048594          162 DFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP  241 (483)
Q Consensus       162 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  241 (483)
                      |||++.............||+.|+|||++.+..++.++||||||+++|+|++|..||.+.........+......++...
T Consensus       177 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  256 (327)
T 3lm5_A          177 DFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEET  256 (327)
T ss_dssp             CGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT
T ss_pred             eCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchh
Confidence            99999987665555567899999999999988899999999999999999999999999998888888888887777777


Q ss_pred             CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCCCCC
Q 048594          242 WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGE  282 (483)
Q Consensus       242 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~~~~  282 (483)
                      ++.+++.+.+||.+||+.||.+|||++++|+||||+....+
T Consensus       257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~  297 (327)
T 3lm5_A          257 FSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFE  297 (327)
T ss_dssp             TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTT
T ss_pred             hcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccccc
Confidence            78899999999999999999999999999999999854443

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=8.1e-44  Score=350.72  Aligned_cols=221  Identities=32%  Similarity=0.584  Sum_probs=199.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|.+++.||+|+||.||+|.++.+|+.||+|++.+...                                 ....|+||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            579999999999999999999999999999999865320                                 01119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      |||.|++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......  .
T Consensus        86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~Dfg~a~~~~~~--~  160 (318)
T 1fot_A           86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDV--T  160 (318)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSSC--B
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE---cCCCCEEEeecCcceecCCc--c
Confidence            999999999999998899999999999999999999999999999999999999   67789999999999876432  3


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ...+||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.+.......+......++    +.++++++++|.+
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~  236 (318)
T 1fot_A          161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSR  236 (318)
T ss_dssp             CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHH
T ss_pred             ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHHHH
Confidence            456899999999999988899999999999999999999999999998888888888776554    4689999999999


Q ss_pred             hCccCCCCCC-----CHHHHHcCCcCCC
Q 048594          256 MLIRDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       256 ~L~~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      ||..||.+||     +++++++||||+.
T Consensus       237 lL~~dp~~R~~~~~~~~~~i~~hp~f~~  264 (318)
T 1fot_A          237 LITRDLSQRLGNLQNGTEDVKNHPWFKE  264 (318)
T ss_dssp             HTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             HhccCHHHcCCCcCCCHHHHhcCccccC
Confidence            9999999999     9999999999983

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.9e-43  Score=346.23  Aligned_cols=229  Identities=27%  Similarity=0.393  Sum_probs=193.7

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------C----------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------D----------   89 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------~----------   89 (483)
                      +.+.++|.+.+.||+|+||+||+|.++.+|+.||+|++......                         .          
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~   84 (308)
T 3g33_A            5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA   84 (308)
T ss_dssp             -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred             cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence            34567999999999999999999999999999999998643210                         0          


Q ss_pred             --------cCeEEEeccCCCChHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEE
Q 048594           90 --------EGYLKREHCDGGTLVDRISDRER--YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLK  159 (483)
Q Consensus        90 --------~~~lv~E~~~g~~L~~~l~~~~~--l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ik  159 (483)
                              ..|+|+||+.+ +|.+++.....  +++..+..++.||+.||.|||++||+||||||+||++   +.++.+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~---~~~~~~k  160 (308)
T 3g33_A           85 TSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVK  160 (308)
T ss_dssp             ECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE---CTTSCEE
T ss_pred             ccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEE
Confidence                    11899999975 99999987654  9999999999999999999999999999999999999   6778999


Q ss_pred             EeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC
Q 048594          160 ATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS  239 (483)
Q Consensus       160 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (483)
                      |+|||.+.............||+.|+|||++.+..++.++|||||||++|+|++|.+||.+......+..+.......+.
T Consensus       161 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  240 (308)
T 3g33_A          161 LADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE  240 (308)
T ss_dssp             ECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             EeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence            99999998776555556678999999999998888999999999999999999999999999888887777653222211


Q ss_pred             CC-----------------------CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          240 DP-----------------------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       240 ~~-----------------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ..                       .+.+++++.+||.+||++||.+|||+.|+|+||||+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~  301 (308)
T 3g33_A          241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH  301 (308)
T ss_dssp             TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC-
T ss_pred             hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCcccc
Confidence            11                       246789999999999999999999999999999998

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=5e-44  Score=363.40  Aligned_cols=234  Identities=35%  Similarity=0.603  Sum_probs=195.1

Q ss_pred             ccccccceEEe-eeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------CCcCe
Q 048594           44 YEDIKLHFTIA-EELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------SDEGY   92 (483)
Q Consensus        44 ~~~i~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------~~~~~   92 (483)
                      ...+.++|.+. +.||+|+||+||+|.++.+|+.||||++.....                              ....|
T Consensus        56 ~~~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           56 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             CCcccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            34566778876 789999999999999999999999999854210                              11128


Q ss_pred             EEEeccCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           93 LKREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      +|||||.||+|.+++...+  .+++..+..++.||+.||.|||++||+||||||+|||++..+.++.+||+|||++....
T Consensus       136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~  215 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT  215 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence            9999999999999998753  59999999999999999999999999999999999999654447899999999998776


Q ss_pred             CCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH----HHHHHHHccccCCCCCCCCCCC
Q 048594          171 EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY----GTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+....    .....+..+...++...|..++
T Consensus       216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s  295 (400)
T 1nxk_A          216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS  295 (400)
T ss_dssp             -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSC
T ss_pred             CCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCC
Confidence            555556678999999999999889999999999999999999999999875532    2556677777777777788899


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .++.+||.+||..||.+|||+.++|+||||.
T Consensus       296 ~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~  326 (400)
T 1nxk_A          296 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  326 (400)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence            9999999999999999999999999999997

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=4.9e-44  Score=353.50  Aligned_cols=234  Identities=32%  Similarity=0.582  Sum_probs=183.0

Q ss_pred             cccccceEEe---eeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------CCcCeE
Q 048594           45 EDIKLHFTIA---EELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------SDEGYL   93 (483)
Q Consensus        45 ~~i~~~y~~~---~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------~~~~~l   93 (483)
                      +.+.++|.+.   +.||+|+||+||+|.++.+|+.||||++.+...                            ....|+
T Consensus         4 ~~f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~l   83 (325)
T 3kn6_A            4 SPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFL   83 (325)
T ss_dssp             CHHHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             CcchhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEE
Confidence            4566778886   789999999999999999999999999976431                            111199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-  172 (483)
                      |||||+|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+..++....+||+|||++...... 
T Consensus        84 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~  163 (325)
T 3kn6_A           84 VMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN  163 (325)
T ss_dssp             EECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred             EEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence            9999999999999999999999999999999999999999999999999999999976555568999999999866433 


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC-------hHHHHHHHHccccCCCCCCCCCC
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES-------LYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~-------~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      ......+||+.|+|||++.+..++.++||||+||++|+|++|..||.+..       ..+....+..+...++...++.+
T Consensus       164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  243 (325)
T 3kn6_A          164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV  243 (325)
T ss_dssp             --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTS
T ss_pred             CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCC
Confidence            23345678999999999998889999999999999999999999997643       34667777777776666666678


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      ++++++||.+||..||.+|||+.++++||||+.
T Consensus       244 s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~  276 (325)
T 3kn6_A          244 SQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD  276 (325)
T ss_dssp             CHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCT
T ss_pred             CHHHHHHHHHHCCCChhHCCCHHHHhcChhhcc
Confidence            999999999999999999999999999999983

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1.5e-43  Score=349.31  Aligned_cols=233  Identities=35%  Similarity=0.620  Sum_probs=206.3

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc----------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE----------------------------------   90 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------------------------------   90 (483)
                      +.+.++|.+.+.||+|+||.||+|.++.+|+.||+|++........                                  
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   87 (321)
T 2a2a_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR   87 (321)
T ss_dssp             SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence            4677899999999999999999999999999999999976542211                                  


Q ss_pred             --CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCC-CCcEEEeecccce
Q 048594           91 --GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE-NATLKATDFGLAF  167 (483)
Q Consensus        91 --~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~-~~~ikl~Dfg~a~  167 (483)
                        .|+|||||.|++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++..++. ...+||+|||.+.
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~  167 (321)
T 2a2a_A           88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (321)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence              1999999999999999998889999999999999999999999999999999999999953221 1279999999998


Q ss_pred             eccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      ............||+.|+|||++.+..++.++||||||+++|+|++|..||.+.........+......++...++.+++
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (321)
T 2a2a_A          168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSE  247 (321)
T ss_dssp             ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCH
T ss_pred             ecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCH
Confidence            87665555567899999999999988899999999999999999999999999988888888887766655444467899


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+.+||.+||..||.+|||+.++|+||||.
T Consensus       248 ~~~~li~~~l~~dp~~Rps~~e~l~hp~~~  277 (321)
T 2a2a_A          248 LAKDFIRKLLVKETRKRLTIQEALRHPWIT  277 (321)
T ss_dssp             HHHHHHHTTSCSSTTTSCCHHHHHHSTTTS
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcCcccc
Confidence            999999999999999999999999999997

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=7.5e-44  Score=343.57  Aligned_cols=233  Identities=38%  Similarity=0.676  Sum_probs=209.1

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------cCeE
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------EGYL   93 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------~~~l   93 (483)
                      ...+.++|.+.+.||+|+||.||+|.++.++..+|+|.+.......                              ..|+
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (277)
T 3f3z_A            4 KGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL   83 (277)
T ss_dssp             --CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence            4567889999999999999999999999999999999987643211                              1199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |||||+|++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++..++.++.++|+|||.+.......
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~  163 (277)
T 3f3z_A           84 VMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK  163 (277)
T ss_dssp             EEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred             EEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence            99999999999999888899999999999999999999999999999999999999765677899999999998877666


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ......||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+......++...+..+++.+.++|
T Consensus       164 ~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (277)
T 3f3z_A          164 MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLI  242 (277)
T ss_dssp             CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHH
T ss_pred             chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHH
Confidence            6667789999999999977 589999999999999999999999999998888888888877766655668899999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcCC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+||+.||.+|||+.++|+||||+
T Consensus       243 ~~~l~~dp~~R~s~~~~l~h~~~~  266 (277)
T 3f3z_A          243 RRLLTKSPKQRITSLQALEHEWFE  266 (277)
T ss_dssp             HHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred             HHHccCChhhCcCHHHHhcCHHHh
Confidence            999999999999999999999997

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.9e-43  Score=352.05  Aligned_cols=223  Identities=26%  Similarity=0.468  Sum_probs=193.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------------cCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------------EGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~lv   94 (483)
                      ++|.+++.||+|+||.||+|+++.+|+.||+|++.+.....                                  ..|+|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            57999999999999999999999999999999997643111                                  11999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CCc
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~~  173 (483)
                      ||||.|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... ...
T Consensus        89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFG~a~~~~~~~~  165 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGD  165 (345)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCGGGCBCSCCTTC
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEEeccccccccCCCC
Confidence            9999999999999988899999999999999999999999999999999999999   677899999999998632 333


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCC---------CChHHHHHHHHccccCCCCCCCCC
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA---------ESLYGTLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~---------~~~~~~~~~i~~~~~~~~~~~~~~  244 (483)
                      .....+||+.|+|||++.+..++.++|+|||||++|+|++|..||..         .........+......++    ..
T Consensus       166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~  241 (345)
T 3a8x_A          166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RS  241 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC----TT
T ss_pred             cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC----CC
Confidence            44567899999999999988899999999999999999999999965         233445556666655543    36


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCH------HHHHcCCcCCC
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITV------AQILKHPWLNY  278 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~------~e~L~h~~~~~  278 (483)
                      +++++++||.+||++||.+|||+      +++++||||+.
T Consensus       242 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~  281 (345)
T 3a8x_A          242 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  281 (345)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred             CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence            89999999999999999999995      89999999984

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=7.2e-44  Score=362.43  Aligned_cols=230  Identities=33%  Similarity=0.515  Sum_probs=200.7

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~   92 (483)
                      ...++|.+++.||+|+||+||+|+++.+|+.||+|++.+...                                 ....|
T Consensus        66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~  145 (410)
T 3v8s_A           66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY  145 (410)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence            345789999999999999999999999999999999865210                                 01119


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|||||+||+|.+++... .+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......
T Consensus       146 lV~E~~~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFG~a~~~~~~  221 (410)
T 3v8s_A          146 MVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKE  221 (410)
T ss_dssp             EEECCCTTEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTT
T ss_pred             EEEeCCCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE---CCCCCEEEeccceeEeeccC
Confidence            999999999999999764 79999999999999999999999999999999999999   67889999999999876544


Q ss_pred             ce--ecccccCCcccCccccCCCC----CCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          173 KV--YEEVVGTPLYMAPELLGPCK----YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       173 ~~--~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ..  ....+||+.|+|||++.+..    ++.++|||||||++|+|++|.+||.+.+.......|......+..+.++.++
T Consensus       222 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s  301 (410)
T 3v8s_A          222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS  301 (410)
T ss_dssp             SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCC
T ss_pred             CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCccccc
Confidence            32  23678999999999997654    7899999999999999999999999999999999988765444444456799


Q ss_pred             HHHHHHHHHhCccCCCC--CCCHHHHHcCCcCCCC
Q 048594          247 SSAKDLIRRMLIRDPNN--QITVAQILKHPWLNYE  279 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~--R~t~~e~L~h~~~~~~  279 (483)
                      +++++||.+||..+|.+  ||+++|+++||||+..
T Consensus       302 ~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          302 KEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             HHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             HHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence            99999999999999988  9999999999999843

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.9e-43  Score=344.80  Aligned_cols=228  Identities=28%  Similarity=0.488  Sum_probs=196.8

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------cCeEE
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------EGYLK   94 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------~~~lv   94 (483)
                      .+..++|.+.+.||+|+||+||+|.+..+|+.||+|++.......                              ..|+|
T Consensus        16 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   95 (297)
T 3fxz_A           16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV   95 (297)
T ss_dssp             SCGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence            356678999999999999999999999999999999986543221                              11899


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-  173 (483)
                      ||||.|++|.+++... .+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....... 
T Consensus        96 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~  171 (297)
T 3fxz_A           96 MEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQS  171 (297)
T ss_dssp             EECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSTTC
T ss_pred             EECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEE---CCCCCEEEeeCCCceecCCccc
Confidence            9999999999999775 69999999999999999999999999999999999999   677899999999998765433 


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+.........+....... ......+++.+.+||
T Consensus       172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li  250 (297)
T 3fxz_A          172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE-LQNPEKLSAIFRDFL  250 (297)
T ss_dssp             CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCC-CSCGGGSCHHHHHHH
T ss_pred             ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-CCCccccCHHHHHHH
Confidence            2345679999999999988889999999999999999999999999888776666655433221 122356899999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcCC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+||+.||.+|||+.|+|+||||+
T Consensus       251 ~~~l~~dp~~Rps~~ell~h~~~~  274 (297)
T 3fxz_A          251 NRCLEMDVEKRGSAKELLQHQFLK  274 (297)
T ss_dssp             HHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred             HHHccCChhHCcCHHHHhhChhhc
Confidence            999999999999999999999998

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.6e-43  Score=353.11  Aligned_cols=223  Identities=29%  Similarity=0.490  Sum_probs=200.5

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYL   93 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~l   93 (483)
                      ..++|.+++.||+|+||.||+|.++.+|+.||+|++.+...                                 ....|+
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  118 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            34689999999999999999999999999999999865321                                 111199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |||||+|++|.+++...+++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...... 
T Consensus       119 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFg~a~~~~~~-  194 (350)
T 1rdq_E          119 VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGR-  194 (350)
T ss_dssp             EEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSC-
T ss_pred             EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE---CCCCCEEEcccccceeccCC-
Confidence            99999999999999988899999999999999999999999999999999999999   67789999999999876543 


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                       ....+||+.|+|||++.+..++.++|+|||||++|+|++|.+||.+.+.......+..+...++    +.+++++.++|
T Consensus       195 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li  269 (350)
T 1rdq_E          195 -TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL  269 (350)
T ss_dssp             -BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHHHH
T ss_pred             -cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHH
Confidence             2456899999999999988899999999999999999999999999998889999988776554    36899999999


Q ss_pred             HHhCccCCCCCCC-----HHHHHcCCcCCC
Q 048594          254 RRMLIRDPNNQIT-----VAQILKHPWLNY  278 (483)
Q Consensus       254 ~~~L~~dP~~R~t-----~~e~L~h~~~~~  278 (483)
                      .+||+.||.+||+     ++++++||||+.
T Consensus       270 ~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             HHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             HHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence            9999999999998     999999999983

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=2.9e-43  Score=344.35  Aligned_cols=232  Identities=40%  Similarity=0.674  Sum_probs=206.5

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc------------------------------CeEE
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------------------GYLK   94 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~------------------------------~~lv   94 (483)
                      ..+.++|.+.+.||+|+||.||+|.++.+|+.||+|++........                              .|+|
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (304)
T 2jam_A            5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV   84 (304)
T ss_dssp             -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence            4677899999999999999999999999999999999976532111                              1899


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      ||||+|++|.+++...+.+++..+..++.||+.||.|||++|++||||||+||++...+..+.++|+|||.+...... .
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-~  163 (304)
T 2jam_A           85 MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-I  163 (304)
T ss_dssp             ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-T
T ss_pred             EEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-c
Confidence            999999999999988889999999999999999999999999999999999999965556788999999998765432 2


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .....||+.|+|||++.+..++.++||||||+++|+|++|..||.+.........+..+...++.+.++.+++++.+||.
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  243 (304)
T 2jam_A          164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFIC  243 (304)
T ss_dssp             THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHH
T ss_pred             cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHH
Confidence            34457999999999999888999999999999999999999999999888888888888877777777889999999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcCC
Q 048594          255 RMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +||..||.+|||+.++|+||||.
T Consensus       244 ~~l~~dp~~Rps~~~~l~h~~~~  266 (304)
T 2jam_A          244 HLLEKDPNERYTCEKALSHPWID  266 (304)
T ss_dssp             HHHCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHcCCChhHCcCHHHHhcCcccc
Confidence            99999999999999999999997

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.6e-43  Score=362.67  Aligned_cols=232  Identities=31%  Similarity=0.512  Sum_probs=199.2

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~   92 (483)
                      ...++|.++++||+|+||+||+|.++.+++.||+|++.+...                                 ....|
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  150 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY  150 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence            345789999999999999999999999999999999975210                                 11119


Q ss_pred             EEEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           93 LKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +|||||.||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus       151 lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---~~~g~vkL~DFGla~~~~~  227 (437)
T 4aw2_A          151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLME  227 (437)
T ss_dssp             EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred             EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE---cCCCCEEEcchhhhhhccc
Confidence            99999999999999987 5789999999999999999999999999999999999999   6788999999999987654


Q ss_pred             Cce--ecccccCCcccCccccC-----CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC-CCC
Q 048594          172 GKV--YEEVVGTPLYMAPELLG-----PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD-PWP  243 (483)
Q Consensus       172 ~~~--~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~  243 (483)
                      ...  ....+||+.|+|||++.     ...++.++||||+||++|+|++|.+||.+.+..+....+......+..+ .++
T Consensus       228 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~  307 (437)
T 4aw2_A          228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVT  307 (437)
T ss_dssp             TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCC
T ss_pred             CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccc
Confidence            332  23468999999999986     4568999999999999999999999999999888888887654332222 235


Q ss_pred             CCCHHHHHHHHHhCccCCCC--CCCHHHHHcCCcCCCCC
Q 048594          244 TISSSAKDLIRRMLIRDPNN--QITVAQILKHPWLNYEN  280 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~--R~t~~e~L~h~~~~~~~  280 (483)
                      .+++++++||.+||..+|.+  |++++|+++||||+..+
T Consensus       308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~  346 (437)
T 4aw2_A          308 DVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGID  346 (437)
T ss_dssp             CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCC
T ss_pred             cCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCC
Confidence            68999999999999998888  99999999999998443

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.2e-43  Score=346.69  Aligned_cols=220  Identities=22%  Similarity=0.306  Sum_probs=171.0

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYL   93 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~l   93 (483)
                      |..+|.+.+.||+|+||+||+|++  +|+.||||++......                                 ...||
T Consensus         1 Iar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l   78 (303)
T 3hmm_A            1 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             CCcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence            456799999999999999999987  4899999999654310                                 01289


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN--------GIMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~--------~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                      |||||+||+|.+++... ++++..+..++.|++.||.|||++        +|+||||||+|||+   +.++.+||+|||+
T Consensus        79 V~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl---~~~~~~Ki~DFGl  154 (303)
T 3hmm_A           79 VSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGL  154 (303)
T ss_dssp             EEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE---CTTSCEEECCCTT
T ss_pred             EecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE---CCCCCEEEEeCCC
Confidence            99999999999999765 799999999999999999999987        89999999999999   6788999999999


Q ss_pred             ceeccCCce-----ecccccCCcccCccccCCC------CCCCcCchHHHHHHHHHHhhCCCCCCCC-------------
Q 048594          166 AFFFEEGKV-----YEEVVGTPLYMAPELLGPC------KYGKEIDIWSAGLILYNLLSGAQPFWAE-------------  221 (483)
Q Consensus       166 a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslGvil~~ll~g~~pf~~~-------------  221 (483)
                      |+.......     ....+||+.|||||++.+.      .++.++|||||||++|||+||.+||...             
T Consensus       155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~  234 (303)
T 3hmm_A          155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS  234 (303)
T ss_dssp             CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred             CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccc
Confidence            987654322     2235799999999999754      3567899999999999999998765321             


Q ss_pred             --ChHHHHHHHHccccCCCCCC-C--CCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          222 --SLYGTLTAIMSREIDFKSDP-W--PTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       222 --~~~~~~~~i~~~~~~~~~~~-~--~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                        ........+.........+. +  ...+..+.+|+.+||+.||.+|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             cchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence              11233333433333221111 0  113356889999999999999999999876

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.4e-42  Score=337.47  Aligned_cols=225  Identities=27%  Similarity=0.457  Sum_probs=186.0

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------CeEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GYLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~lv~E   96 (483)
                      ++|++++.||+|+||+||+|.++.+|+.||+|++........                                .|+|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            579999999999999999999999999999999976543221                                199999


Q ss_pred             ccCCCChHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ce
Q 048594           97 HCDGGTLVDRIS-DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KV  174 (483)
Q Consensus        97 ~~~g~~L~~~l~-~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~  174 (483)
                      ||.+ +|.+.+. ..+.+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||.+...... ..
T Consensus        82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~  157 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCSCCSC
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceecCCcccc
Confidence            9987 5655554 46789999999999999999999999999999999999999   67789999999999876532 23


Q ss_pred             ecccccCCcccCccccCCCC-CCCcCchHHHHHHHHHHhhCCCC-CCCCChHHHHHHHHccccCCCC-------------
Q 048594          175 YEEVVGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQP-FWAESLYGTLTAIMSREIDFKS-------------  239 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~~ll~g~~p-f~~~~~~~~~~~i~~~~~~~~~-------------  239 (483)
                      .....||+.|+|||++.+.. ++.++||||+||++|+|++|..| |.+......+..+.........             
T Consensus       158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  237 (292)
T 3o0g_A          158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK  237 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred             ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence            34567899999999987755 79999999999999999988777 4555556666665442111111             


Q ss_pred             ------------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          240 ------------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       240 ------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                  ...+.+++++++||.+||+.||.+|||++|+|+||||+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  287 (292)
T 3o0g_A          238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS  287 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccc
Confidence                        11235789999999999999999999999999999997

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4.6e-44  Score=354.92  Aligned_cols=223  Identities=35%  Similarity=0.599  Sum_probs=191.6

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYL   93 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~l   93 (483)
                      .-++|.+.+.||+|+||+||+|.+..+|+.||+|++.+...                                 ....|+
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   86 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM   86 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            44689999999999999999999999999999999864310                                 011199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ||||+ +|+|.+++...+++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....+.
T Consensus        87 v~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~DFG~s~~~~~~~  162 (336)
T 3h4j_B           87 VIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGN  162 (336)
T ss_dssp             EECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE---CTTCCEEECCSSCTBTTTTSB
T ss_pred             EEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE---cCCCCEEEEEeccceeccCCc
Confidence            99999 67999999888899999999999999999999999999999999999999   677899999999998877666


Q ss_pred             eecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      .....+||+.|+|||++.+..+ +.++||||+||++|+|++|..||.+.........+......    ..+.+|+++.+|
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~----~p~~~s~~~~~l  238 (336)
T 3h4j_B          163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYV----MPDFLSPGAQSL  238 (336)
T ss_dssp             TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCC----CCTTSCHHHHHH
T ss_pred             ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCC----CcccCCHHHHHH
Confidence            5667789999999999988776 68999999999999999999999876544433333222222    224689999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      |.+||..||.+|||++|+++||||+
T Consensus       239 i~~~L~~dP~~Rpt~~eil~hp~~~  263 (336)
T 3h4j_B          239 IRRMIVADPMQRITIQEIRRDPWFN  263 (336)
T ss_dssp             HHTTSCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHhChhhc
Confidence            9999999999999999999999998

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=2.8e-43  Score=360.18  Aligned_cols=233  Identities=33%  Similarity=0.615  Sum_probs=193.4

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------   88 (483)
                      ..+.++|.+.+.||+|+||+||+|.++.+++.||||++.+....                                    
T Consensus       131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~  210 (419)
T 3i6u_A          131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD  210 (419)
T ss_dssp             HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred             hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            35678999999999999999999999999999999998764210                                    


Q ss_pred             -CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           89 -DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                       ...|+|||||.|++|.+++...+++++..+..++.||+.||.|||+++|+||||||+|||+...+....+||+|||++.
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~  290 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  290 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred             cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence             0118999999999999999988899999999999999999999999999999999999999655555679999999998


Q ss_pred             eccCCceecccccCCcccCccccCC---CCCCCcCchHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHHccccCCCCCCCC
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLGP---CKYGKEIDIWSAGLILYNLLSGAQPFWAESL-YGTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~  243 (483)
                      ...........+||+.|+|||++.+   ..++.++|||||||++|+|++|.+||..... ......+..+...+....++
T Consensus       291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~  370 (419)
T 3i6u_A          291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA  370 (419)
T ss_dssp             SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHT
T ss_pred             ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhc
Confidence            8766555566789999999999853   4678899999999999999999999976543 34455666666655555567


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+++.+.+||.+||+.||.+|||++|+|+||||+
T Consensus       371 ~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~  404 (419)
T 3i6u_A          371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ  404 (419)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             ccCHHHHHHHHHHccCChhHCcCHHHHhCCcccC
Confidence            7899999999999999999999999999999997

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1e-42  Score=337.48  Aligned_cols=231  Identities=34%  Similarity=0.596  Sum_probs=193.6

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------CeE
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------GYL   93 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~~l   93 (483)
                      ..+.++|.+.+.||+|+||+||+|.++.+|..+|+|++........                               .|+
T Consensus        18 g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   97 (285)
T 3is5_A           18 GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYI   97 (285)
T ss_dssp             SCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEE
Confidence            3677899999999999999999999999999999999976542211                               199


Q ss_pred             EEeccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           94 KREHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      |||||+|++|.+++..    ...+++..+..++.||+.||.|||++||+||||||+||++...+..+.+||+|||++...
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A           98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            9999999999998854    368999999999999999999999999999999999999975556678999999999877


Q ss_pred             cCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          170 EEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      ..........||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+......+... ...+++++
T Consensus       178 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  255 (285)
T 3is5_A          178 KSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLTPQA  255 (285)
T ss_dssp             ---------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC---CCCCHHH
T ss_pred             CCcccCcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccc-cCcCCHHH
Confidence            65555566789999999999875 78899999999999999999999999988777777666555444332 23578999


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+||.+||+.||.+|||+.|+|+||||+
T Consensus       256 ~~li~~~L~~dP~~Rps~~e~l~hp~f~  283 (285)
T 3is5_A          256 VDLLKQMLTKDPERRPSAAQVLHHEWFK  283 (285)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHHTSGGGG
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCHHhh
Confidence            9999999999999999999999999997

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.2e-42  Score=350.56  Aligned_cols=224  Identities=24%  Similarity=0.478  Sum_probs=195.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv   94 (483)
                      .++|.+++.||+|+||.||+|.++.+|+.||+|++.+...                                 ....|+|
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            4689999999999999999999999999999999865320                                 1112999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      ||||.||+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++..+.....
T Consensus        94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~  170 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQ  170 (384)
T ss_dssp             ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTTCC
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---CCCCCEEEeccceeeeccCCCc
Confidence            9999999999999998899999999999999999999999999999999999999   6778999999999998776666


Q ss_pred             ecccccCCcccCccccCC---CCCCCcCchHHHHHHHHHHhhCCCCCCCCC---hHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          175 YEEVVGTPLYMAPELLGP---CKYGKEIDIWSAGLILYNLLSGAQPFWAES---LYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~~ll~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      ....+||+.|+|||++..   ..++.++|||||||++|+|++|..||.+..   .......+......++    ..++++
T Consensus       171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p----~~~s~~  246 (384)
T 4fr4_A          171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP----SAWSQE  246 (384)
T ss_dssp             BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC----TTSCHH
T ss_pred             eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC----CcCCHH
Confidence            677899999999999863   458899999999999999999999997543   3444555555444433    468999


Q ss_pred             HHHHHHHhCccCCCCCCC-HHHHHcCCcCCC
Q 048594          249 AKDLIRRMLIRDPNNQIT-VAQILKHPWLNY  278 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t-~~e~L~h~~~~~  278 (483)
                      +.+||.+||..||.+||+ ++++++||||+.
T Consensus       247 ~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~  277 (384)
T 4fr4_A          247 MVSLLKKLLEPNPDQRFSQLSDVQNFPYMND  277 (384)
T ss_dssp             HHHHHHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred             HHHHHHHHhcCCHhHhcccHHHHHcChhhhc
Confidence            999999999999999998 899999999983

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=7.5e-43  Score=344.73  Aligned_cols=228  Identities=31%  Similarity=0.552  Sum_probs=191.8

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLK   94 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv   94 (483)
                      .+.++|++.+.||+|+||+||+|.++.+++.||+|++.......                               ..|+|
T Consensus         4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv   83 (323)
T 3tki_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   83 (323)
T ss_dssp             TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            46678999999999999999999999999999999986543211                               11899


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-  173 (483)
                      ||||+|++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++..+.... 
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~~  160 (323)
T 3tki_A           84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNR  160 (323)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEETTE
T ss_pred             EEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE---eCCCCEEEEEeeccceeccCCc
Confidence            9999999999999888889999999999999999999999999999999999999   677899999999998664322 


Q ss_pred             --eecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHH-HHHHHccccCCCCCCCCCCCHHH
Q 048594          174 --VYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGT-LTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       174 --~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                        .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+...... .........  ...++..+++.+
T Consensus       161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  238 (323)
T 3tki_A          161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNPWKKIDSAP  238 (323)
T ss_dssp             ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT--TSTTGGGSCHHH
T ss_pred             ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc--cCCccccCCHHH
Confidence              2235679999999999977665 6789999999999999999999987655422 233232222  223356789999


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      .+||.+||..||.+|||+.|+++||||+.
T Consensus       239 ~~li~~~L~~dP~~R~t~~eil~h~~~~~  267 (323)
T 3tki_A          239 LALLHKILVENPSARITIPDIKKDRWYNK  267 (323)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             HHHHHHHccCChhhCcCHHHHhhChhhcc
Confidence            99999999999999999999999999984

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=8.1e-43  Score=359.71  Aligned_cols=225  Identities=30%  Similarity=0.524  Sum_probs=198.3

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYL   93 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~l   93 (483)
                      ..++|.+++.||+|+||.||+|.++.+|+.||||++.+...                                 ....|+
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l  225 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF  225 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence            35789999999999999999999999999999999875310                                 001189


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-C
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-E  171 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~  171 (483)
                      |||||+|++|.+++.....+++..+..++.||+.||.|||+ +||+||||||+|||+   +.++.+||+|||++.... .
T Consensus       226 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~  302 (446)
T 4ejn_A          226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKD  302 (446)
T ss_dssp             EECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEE---CSSSCEEECCCCCCCTTCC-
T ss_pred             EEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEE---CCCCCEEEccCCCceeccCC
Confidence            99999999999999988899999999999999999999998 999999999999999   667899999999997643 2


Q ss_pred             CceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          172 GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+......++    ..+++++.+
T Consensus       303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~  378 (446)
T 4ejn_A          303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLGPEAKS  378 (446)
T ss_dssp             ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred             CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHH
Confidence            3334567899999999999888999999999999999999999999999998888888887766554    368999999


Q ss_pred             HHHHhCccCCCCCC-----CHHHHHcCCcCCC
Q 048594          252 LIRRMLIRDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       252 li~~~L~~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      ||.+||++||.+||     |++|+++||||+.
T Consensus       379 li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~  410 (446)
T 4ejn_A          379 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG  410 (446)
T ss_dssp             HHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             HHHHHcccCHHHhCCCCCCCHHHHHhCccccC
Confidence            99999999999999     9999999999983

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=3.2e-43  Score=345.71  Aligned_cols=233  Identities=33%  Similarity=0.564  Sum_probs=192.6

Q ss_pred             cccccceEEe-eeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCe
Q 048594           45 EDIKLHFTIA-EELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGY   92 (483)
Q Consensus        45 ~~i~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~   92 (483)
                      ..+.++|.+. +.||+|+||+||+|.++.+|+.||||++.......                               ..|
T Consensus         8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~   87 (316)
T 2ac3_A            8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY   87 (316)
T ss_dssp             CCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             cccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence            4577899995 78999999999999999999999999997653211                               118


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|||||+|++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++..++....+||+|||++......
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  167 (316)
T 2ac3_A           88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN  167 (316)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred             EEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence            99999999999999998889999999999999999999999999999999999999965444455999999998765321


Q ss_pred             c--------eecccccCCcccCccccCC-----CCCCCcCchHHHHHHHHHHhhCCCCCCCCCh---------------H
Q 048594          173 K--------VYEEVVGTPLYMAPELLGP-----CKYGKEIDIWSAGLILYNLLSGAQPFWAESL---------------Y  224 (483)
Q Consensus       173 ~--------~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~~ll~g~~pf~~~~~---------------~  224 (483)
                      .        .....+||+.|+|||++.+     ..++.++|||||||++|+|++|..||.+...               .
T Consensus       168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  247 (316)
T 2ac3_A          168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN  247 (316)
T ss_dssp             --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred             CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence            1        1223569999999999864     3578999999999999999999999977542               3


Q ss_pred             HHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          225 GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       225 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .....+......++...++.+++.+++||.+||..||.+|||+.|+|+||||+
T Consensus       248 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~  300 (316)
T 2ac3_A          248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ  300 (316)
T ss_dssp             HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC
T ss_pred             HHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhc
Confidence            45666666666655544567899999999999999999999999999999998

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=7.5e-43  Score=350.57  Aligned_cols=230  Identities=36%  Similarity=0.667  Sum_probs=205.5

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------   88 (483)
                      ..+.++|.+.+.||+|++|.||+|.++.+|+.||||++......                                    
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            45668899999999999999999999999999999998654311                                    


Q ss_pred             ---CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           89 ---DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        89 ---~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                         ...|+|||||.|++|.+++.....+++..+..++.||+.||.|||+.||+|+||||+||++   +.++.++|+|||+
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~---~~~~~ikl~DfG~  246 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGF  246 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTT
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEEecCc
Confidence               0119999999999999999988889999999999999999999999999999999999999   6778999999999


Q ss_pred             ceeccCCceecccccCCcccCccccCC------CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC
Q 048594          166 AFFFEEGKVYEEVVGTPLYMAPELLGP------CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS  239 (483)
Q Consensus       166 a~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (483)
                      +..+.........+||+.|+|||++.+      ..++.++|||||||++|+|++|..||.+.........+..+...++.
T Consensus       247 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  326 (365)
T 2y7j_A          247 SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS  326 (365)
T ss_dssp             CEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH
T ss_pred             ccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC
Confidence            988776665667789999999998853      35788999999999999999999999998888888888887777666


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +.++.+++.+.+||.+||..||.+|||+.++|+||||+
T Consensus       327 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          327 PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence            56678899999999999999999999999999999996

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.9e-42  Score=339.95  Aligned_cols=231  Identities=26%  Similarity=0.423  Sum_probs=188.6

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------c
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------E   90 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~   90 (483)
                      ..+.+.++|.+++.||+|+||+||+|.++ +|+.||+|++.......                                .
T Consensus        15 ~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   93 (311)
T 3niz_A           15 YFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERC   93 (311)
T ss_dssp             CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSC
T ss_pred             eecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCE
Confidence            45678899999999999999999999996 58999999997543221                                1


Q ss_pred             CeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           91 GYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      .|+|||||.| +|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...
T Consensus        94 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~  169 (311)
T 3niz_A           94 LTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAF  169 (311)
T ss_dssp             EEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEET
T ss_pred             EEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE---CCCCCEEEccCcCceec
Confidence            1999999986 788887665 459999999999999999999999999999999999999   67789999999999876


Q ss_pred             cCC-ceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCC------
Q 048594          170 EEG-KVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP------  241 (483)
Q Consensus       170 ~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~------  241 (483)
                      ... .......||+.|+|||++.+ ..++.++||||+||++|+|++|..||.+......+..+...........      
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  249 (311)
T 3niz_A          170 GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE  249 (311)
T ss_dssp             TSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTT
T ss_pred             CCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhc
Confidence            532 23345678999999999876 4579999999999999999999999988777666666543211111111      


Q ss_pred             --------------------CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          242 --------------------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       242 --------------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                          .+.+++++.+||.+||++||.+|||++|+|+||||+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  306 (311)
T 3niz_A          250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD  306 (311)
T ss_dssp             SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCccccc
Confidence                                2356789999999999999999999999999999983

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8.5e-43  Score=353.06  Aligned_cols=228  Identities=29%  Similarity=0.477  Sum_probs=182.9

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-----------------------------------CC
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-----------------------------------SD   89 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----------------------------------~~   89 (483)
                      ..+.++|.+++.||+|+||+||+|.++.+|+.||||++.....                                   ..
T Consensus         5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~   84 (388)
T 3oz6_A            5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR   84 (388)
T ss_dssp             HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred             CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence            4567899999999999999999999999999999999854310                                   01


Q ss_pred             cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           90 EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ..|+|||||.+ +|.+++.. ..+++..+..++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+++.+
T Consensus        85 ~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~  159 (388)
T 3oz6_A           85 DVYLVFDYMET-DLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSF  159 (388)
T ss_dssp             CEEEEEECCSE-EHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEES
T ss_pred             EEEEEecccCc-CHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE---cCCCCEEecCCcccccc
Confidence            12999999985 89998876 479999999999999999999999999999999999999   67789999999999865


Q ss_pred             cC----------------------CceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHH
Q 048594          170 EE----------------------GKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGT  226 (483)
Q Consensus       170 ~~----------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~  226 (483)
                      ..                      .......+||++|+|||++.+ ..++.++||||+||++|+|++|.+||.+.+....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  239 (388)
T 3oz6_A          160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ  239 (388)
T ss_dssp             SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            32                      112234589999999999876 5789999999999999999999999999988887


Q ss_pred             HHHHHccccCCCC--------------------------------------------CCCCCCCHHHHHHHHHhCccCCC
Q 048594          227 LTAIMSREIDFKS--------------------------------------------DPWPTISSSAKDLIRRMLIRDPN  262 (483)
Q Consensus       227 ~~~i~~~~~~~~~--------------------------------------------~~~~~~~~~~~~li~~~L~~dP~  262 (483)
                      +..+.... ..+.                                            .+...+++++.+||.+||++||.
T Consensus       240 ~~~i~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~  318 (388)
T 3oz6_A          240 LERIIGVI-DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN  318 (388)
T ss_dssp             HHHHHHHH-CCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred             HHHHHHhc-CCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence            77765321 1110                                            01236789999999999999999


Q ss_pred             CCCCHHHHHcCCcCCC
Q 048594          263 NQITVAQILKHPWLNY  278 (483)
Q Consensus       263 ~R~t~~e~L~h~~~~~  278 (483)
                      +|||++|+|+||||+.
T Consensus       319 ~R~t~~e~l~Hp~~~~  334 (388)
T 3oz6_A          319 KRISANDALKHPFVSI  334 (388)
T ss_dssp             GSCCHHHHTTSTTTTT
T ss_pred             cCCCHHHHhCCHHHHH
Confidence            9999999999999974

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.1e-42  Score=375.34  Aligned_cols=225  Identities=28%  Similarity=0.492  Sum_probs=202.4

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~l   93 (483)
                      .++|.+++.||+|+||.||+|.++.+++.||||++.+...                                  ....|+
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            4689999999999999999999999999999999875310                                  011299


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc-CC
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~-~~  172 (483)
                      |||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++.... ..
T Consensus       420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~  496 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDG  496 (674)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE---CSSSCEEECCCTTCEECCCTT
T ss_pred             EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE---cCCCcEEEeecceeeccccCC
Confidence            99999999999999988899999999999999999999999999999999999999   677899999999998643 33


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+....|....+.++    ..+++++.+|
T Consensus       497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l  572 (674)
T 3pfq_A          497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAI  572 (674)
T ss_dssp             CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCC----TTSCHHHHHH
T ss_pred             cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHH
Confidence            344567899999999999988999999999999999999999999999999999999998877665    3689999999


Q ss_pred             HHHhCccCCCCCCCH-----HHHHcCCcCCCC
Q 048594          253 IRRMLIRDPNNQITV-----AQILKHPWLNYE  279 (483)
Q Consensus       253 i~~~L~~dP~~R~t~-----~e~L~h~~~~~~  279 (483)
                      |.+||++||.+||++     +++++||||+..
T Consensus       573 i~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          573 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             HHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred             HHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence            999999999999997     999999999843

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.9e-43  Score=355.41  Aligned_cols=232  Identities=27%  Similarity=0.434  Sum_probs=196.4

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~   92 (483)
                      ...++|.+++.||+|+||.||+|+++.+|+.||+|++.+...                                 ....|
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  137 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLY  137 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence            345789999999999999999999999999999999965210                                 11119


Q ss_pred             EEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           93 LKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++.....
T Consensus       138 lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---d~~g~vkL~DFGla~~~~~  214 (412)
T 2vd5_A          138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRA  214 (412)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred             EEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee---cCCCCEEEeechhheeccC
Confidence            999999999999999875 479999999999999999999999999999999999999   6778999999999987654


Q ss_pred             Cce--ecccccCCcccCccccC-------CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC-C
Q 048594          172 GKV--YEEVVGTPLYMAPELLG-------PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD-P  241 (483)
Q Consensus       172 ~~~--~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~  241 (483)
                      ...  ....+||+.|+|||++.       ...++.++|||||||++|+|++|..||.+.+.......|.........+ .
T Consensus       215 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~  294 (412)
T 2vd5_A          215 DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLV  294 (412)
T ss_dssp             TSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC--
T ss_pred             CCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCcc
Confidence            432  23468999999999986       3468999999999999999999999999999888888887643222222 1


Q ss_pred             CCCCCHHHHHHHHHhCccCCCCC---CCHHHHHcCCcCCCCCC
Q 048594          242 WPTISSSAKDLIRRMLIRDPNNQ---ITVAQILKHPWLNYENG  281 (483)
Q Consensus       242 ~~~~~~~~~~li~~~L~~dP~~R---~t~~e~L~h~~~~~~~~  281 (483)
                      ...+|+++++||.+||. +|.+|   ++++|+++||||+.-++
T Consensus       295 ~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w  336 (412)
T 2vd5_A          295 DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDW  336 (412)
T ss_dssp             --CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCS
T ss_pred             ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCH
Confidence            24689999999999999 99998   59999999999985444

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=2.1e-42  Score=342.30  Aligned_cols=234  Identities=26%  Similarity=0.397  Sum_probs=188.0

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------Ce
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GY   92 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~   92 (483)
                      ....++|.+++.||+|+||+||+|.++.+|+.||||++........                                .|
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            3456789999999999999999999999999999999975542211                                18


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC--CCCCcEEEeecccceecc
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD--DENATLKATDFGLAFFFE  170 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~--~~~~~ikl~Dfg~a~~~~  170 (483)
                      +|||||.| +|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+..+  +..+.+||+|||++....
T Consensus       110 lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~  188 (329)
T 3gbz_A          110 LIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG  188 (329)
T ss_dssp             EEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred             EEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence            99999986 999999998899999999999999999999999999999999999999643  234569999999998764


Q ss_pred             CC-ceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCC-----
Q 048594          171 EG-KVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP-----  243 (483)
Q Consensus       171 ~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-----  243 (483)
                      .. .......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+......+..+...........++     
T Consensus       189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (329)
T 3gbz_A          189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL  268 (329)
T ss_dssp             -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh
Confidence            32 233455789999999999764 47999999999999999999999999988877777765432221111111     


Q ss_pred             ---------------------CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          244 ---------------------TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       244 ---------------------~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                                           .+++++.+||.+||++||.+|||++|+|+||||+..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN  325 (329)
T ss_dssp             TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred             hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence                                 167899999999999999999999999999999843

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=3.3e-42  Score=340.69  Aligned_cols=225  Identities=30%  Similarity=0.515  Sum_probs=193.9

Q ss_pred             cccceEEeeeecccCceeEEEEEEC---CCCCEEEEEEeccCCCC----------------------------------C
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTEN---STGLQFACKSISKTSKS----------------------------------D   89 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~----------------------------------~   89 (483)
                      ..++|.+.+.||+|+||.||+|.+.   .+|+.||+|++.+....                                  .
T Consensus        15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   94 (327)
T 3a62_A           15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG   94 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence            3468999999999999999999985   68999999999764210                                  0


Q ss_pred             cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           90 EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ..|+|||||.|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~~~~~  171 (327)
T 3a62_A           95 KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKES  171 (327)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTSCEEECCCSCC---
T ss_pred             EEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEE---CCCCcEEEEeCCccccc
Confidence            119999999999999999988889999999999999999999999999999999999999   67789999999998764


Q ss_pred             cC-CceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          170 EE-GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       170 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      .. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+......++    +.++++
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~  247 (327)
T 3a62_A          172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQE  247 (327)
T ss_dssp             -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC----TTSCHH
T ss_pred             ccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHH
Confidence            32 2233456899999999999888899999999999999999999999999988888888887765544    468999


Q ss_pred             HHHHHHHhCccCCCCCC-----CHHHHHcCCcCCC
Q 048594          249 AKDLIRRMLIRDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      +++||.+||..||.+||     ++.++++||||+.
T Consensus       248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~  282 (327)
T 3a62_A          248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH  282 (327)
T ss_dssp             HHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred             HHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence            99999999999999999     8999999999983

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.2e-42  Score=349.92  Aligned_cols=231  Identities=33%  Similarity=0.557  Sum_probs=199.5

Q ss_pred             ccccceEE--eeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------CCcCeE
Q 048594           46 DIKLHFTI--AEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------SDEGYL   93 (483)
Q Consensus        46 ~i~~~y~~--~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------~~~~~l   93 (483)
                      .+...|.+  .+.||+|+||.||+|.++.+|+.||+|++.....                              ....|+
T Consensus        84 ~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  163 (373)
T 2x4f_A           84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVL  163 (373)
T ss_dssp             CGGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence            44556666  6789999999999999999999999999976431                              111199


Q ss_pred             EEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |||||+|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+..+ ..+.+||+|||++......
T Consensus       164 v~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~DFG~a~~~~~~  242 (373)
T 2x4f_A          164 VMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNR-DAKQIKIIDFGLARRYKPR  242 (373)
T ss_dssp             EEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEET-TTTEEEECCCSSCEECCTT
T ss_pred             EEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecC-CCCcEEEEeCCCceecCCc
Confidence            99999999999988755 469999999999999999999999999999999999999642 4578999999999987766


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+......++...++.+++++++|
T Consensus       243 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  322 (373)
T 2x4f_A          243 EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEF  322 (373)
T ss_dssp             CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHH
T ss_pred             cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHH
Confidence            55566789999999999988888999999999999999999999999999989999998887777766677899999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      |.+||+.||.+|||+.|+|+||||.
T Consensus       323 i~~~L~~dp~~Rps~~e~l~hp~~~  347 (373)
T 2x4f_A          323 ISKLLIKEKSWRISASEALKHPWLS  347 (373)
T ss_dssp             HHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHHHcCCChhhCCCHHHHhcCcCcC
Confidence            9999999999999999999999997

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.1e-42  Score=339.49  Aligned_cols=227  Identities=26%  Similarity=0.381  Sum_probs=184.9

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E~   97 (483)
                      ++|.+++.||+|+||+||+|.++.+|+.||+|++.......                               ..|+||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57999999999999999999999999999999987543211                               11999999


Q ss_pred             cCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-cee
Q 048594           98 CDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~  175 (483)
                      |.| +|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++...... ...
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~~~~~~~~  157 (324)
T 3mtl_A           82 LDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTY  157 (324)
T ss_dssp             CSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEE---CTTCCEEECSSSEEECC-------
T ss_pred             ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEE---CCCCCEEEccCcccccccCCcccc
Confidence            986 899988765 459999999999999999999999999999999999999   67789999999999865432 233


Q ss_pred             cccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCC-------------
Q 048594          176 EEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP-------------  241 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-------------  241 (483)
                      ....||+.|+|||++.+ ..++.++||||+||++|+|++|..||.+.+..+....+...........             
T Consensus       158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (324)
T 3mtl_A          158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY  237 (324)
T ss_dssp             -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred             ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence            44578999999999876 5679999999999999999999999999888877777655322222111             


Q ss_pred             -------------CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          242 -------------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       242 -------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                                   .+.+++++.+||.+||++||.+|||++|+|+||||...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  288 (324)
T 3mtl_A          238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL  288 (324)
T ss_dssp             CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhc
Confidence                         23578999999999999999999999999999999843

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=8.1e-43  Score=349.41  Aligned_cols=239  Identities=24%  Similarity=0.340  Sum_probs=195.8

Q ss_pred             ccccccccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------
Q 048594           36 DDTILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------   87 (483)
Q Consensus        36 ~~~~~~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------   87 (483)
                      ...+.......+.++|.+++.||+|+||+||+|.+..+++.||||++.....                            
T Consensus        22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~  101 (360)
T 3llt_A           22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKY  101 (360)
T ss_dssp             GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred             ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence            3334455567888999999999999999999999999999999999864210                            


Q ss_pred             ------CCcCeEEEeccCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC-------
Q 048594           88 ------SDEGYLKREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD-------  152 (483)
Q Consensus        88 ------~~~~~lv~E~~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~-------  152 (483)
                            .+..|+||||| |++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+...       
T Consensus       102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~  180 (360)
T 3llt_A          102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLI  180 (360)
T ss_dssp             EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEE
T ss_pred             cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccccccc
Confidence                  01118999999 889999998764  59999999999999999999999999999999999999531       


Q ss_pred             ---------------CCCCcEEEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCC
Q 048594          153 ---------------DENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQP  217 (483)
Q Consensus       153 ---------------~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~p  217 (483)
                                     ...+.+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p  258 (360)
T 3llt_A          181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY--HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL  258 (360)
T ss_dssp             EEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC--CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             chhcccccccccccccCCCCEEEEeccCceecCCC--CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCC
Confidence                           12678999999999875432  2456789999999999998999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHccccCCCCC---------------------CCC---------------------CCCHHHHHHHHH
Q 048594          218 FWAESLYGTLTAIMSREIDFKSD---------------------PWP---------------------TISSSAKDLIRR  255 (483)
Q Consensus       218 f~~~~~~~~~~~i~~~~~~~~~~---------------------~~~---------------------~~~~~~~~li~~  255 (483)
                      |.+......+..+.......+..                     .|+                     ..++.+.+||.+
T Consensus       259 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  338 (360)
T 3llt_A          259 FRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYS  338 (360)
T ss_dssp             CCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHH
Confidence            99888777666655432221100                     000                     123778899999


Q ss_pred             hCccCCCCCCCHHHHHcCCcCC
Q 048594          256 MLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||++||.+|||++|+|+||||+
T Consensus       339 ~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          339 ILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HhcCChhhCCCHHHHhcCcccC
Confidence            9999999999999999999995

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=5.2e-42  Score=334.09  Aligned_cols=231  Identities=34%  Similarity=0.624  Sum_probs=206.0

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------C---------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------S---------   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------~---------   88 (483)
                      ..+.++|.+.+.||+|++|.||+|.++.+|+.||||++.....                           .         
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (298)
T 1phk_A           13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT   92 (298)
T ss_dssp             --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence            4677899999999999999999999999999999999865421                           0         


Q ss_pred             ----CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           89 ----DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        89 ----~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                          ...|+||||+.+++|.+++.....+++..+..++.||+.||.|||++|++|+||+|+||++   +.++.+||+|||
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg  169 (298)
T 1phk_A           93 YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFG  169 (298)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCT
T ss_pred             eccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---cCCCcEEEeccc
Confidence                0119999999999999999988899999999999999999999999999999999999999   677889999999


Q ss_pred             cceeccCCceecccccCCcccCccccC------CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC
Q 048594          165 LAFFFEEGKVYEEVVGTPLYMAPELLG------PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK  238 (483)
Q Consensus       165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  238 (483)
                      .+.............|++.|+|||++.      ...++.++||||||+++|+|++|..||.+.........+......++
T Consensus       170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  249 (298)
T 1phk_A          170 FSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG  249 (298)
T ss_dssp             TCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC
T ss_pred             chhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccC
Confidence            998876665556678999999999884      44678999999999999999999999999888888888888877777


Q ss_pred             CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          239 SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       239 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      .+.++.++..+.++|.+||..||.+|||+.++|+||||+.
T Consensus       250 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (298)
T 1phk_A          250 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  289 (298)
T ss_dssp             TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             cccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhh
Confidence            7667789999999999999999999999999999999983

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=9.6e-43  Score=360.41  Aligned_cols=229  Identities=26%  Similarity=0.402  Sum_probs=185.7

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------------------C--
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------------------S--   88 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------------------~--   88 (483)
                      ..-.+.++|.+++.||+|+||+||+|.++.+|+.||||++.....                                .  
T Consensus        56 ~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~  135 (464)
T 3ttj_A           56 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT  135 (464)
T ss_dssp             CEEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCS
T ss_pred             cceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCc
Confidence            334567899999999999999999999999999999999965310                                0  


Q ss_pred             ----CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           89 ----DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        89 ----~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                          ...|+|||||.+ +|.+.+..  .+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||
T Consensus       136 ~~~~~~~~lv~E~~~~-~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll---~~~~~~kl~DFG  209 (464)
T 3ttj_A          136 LEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFG  209 (464)
T ss_dssp             TTTCCEEEEEEECCSE-EHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCC
T ss_pred             cccCCeEEEEEeCCCC-CHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE---eCCCCEEEEEEE
Confidence                112899999987 57777753  59999999999999999999999999999999999999   677899999999


Q ss_pred             cceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCC-------
Q 048594          165 LAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDF-------  237 (483)
Q Consensus       165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------  237 (483)
                      +++...........+||+.|+|||++.+..|+.++||||+||++|+|++|++||.+.+..+.+..+.......       
T Consensus       210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~  289 (464)
T 3ttj_A          210 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK  289 (464)
T ss_dssp             CC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred             eeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence            9988766555566789999999999999899999999999999999999999999988877777665421110       


Q ss_pred             ---------------CCCCC----CC------------CCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          238 ---------------KSDPW----PT------------ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       238 ---------------~~~~~----~~------------~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                     ....+    +.            .++++++||.+||++||.+|||++|+|+||||+
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~  360 (464)
T 3ttj_A          290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN  360 (464)
T ss_dssp             SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred             cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhh
Confidence                           00000    00            156799999999999999999999999999997

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=5.4e-42  Score=332.81  Aligned_cols=224  Identities=30%  Similarity=0.442  Sum_probs=184.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~E   96 (483)
                      ++|.+++.||+|+||+||+|.+ .+|+.+|+|.+.......                                ..|+|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence            5799999999999999999998 679999999996543211                                1199999


Q ss_pred             ccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ce
Q 048594           97 HCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KV  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~  174 (483)
                      |+.+ +|.+++... +.+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||.+...... ..
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~  156 (288)
T 1ob3_A           81 HLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRK  156 (288)
T ss_dssp             CCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC----
T ss_pred             ecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEeECccccccCccccc
Confidence            9987 899988764 679999999999999999999999999999999999999   67789999999999765432 22


Q ss_pred             ecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC--------------
Q 048594          175 YEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS--------------  239 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~--------------  239 (483)
                      .....||+.|+|||++.+. .++.++||||+||++|+|++|..||.+......+..+.........              
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T 1ob3_A          157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP  236 (288)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccc
Confidence            3445789999999998754 5799999999999999999999999988877776666532111000              


Q ss_pred             -----------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          240 -----------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       240 -----------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                 ...+.+++++.+||.+||..||.+|||++|+|+||||+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  285 (288)
T 1ob3_A          237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK  285 (288)
T ss_dssp             TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred             ccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchh
Confidence                       01235789999999999999999999999999999997

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=1.2e-42  Score=359.62  Aligned_cols=224  Identities=30%  Similarity=0.568  Sum_probs=200.9

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYL   93 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~l   93 (483)
                      ..++|.+.+.||+|+||.||+|.++.+|+.||||++.+...                                 ....|+
T Consensus        14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l   93 (476)
T 2y94_A           14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM   93 (476)
T ss_dssp             EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            44689999999999999999999999999999999865321                                 111199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |||||.|++|.+++...+++++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....+.
T Consensus        94 v~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll---~~~~~vkL~DFG~a~~~~~~~  170 (476)
T 2y94_A           94 VMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGE  170 (476)
T ss_dssp             EEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE---CTTCCEEECCCSSCEECCTTC
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE---ecCCCeEEEeccchhhccccc
Confidence            99999999999999988899999999999999999999999999999999999999   677899999999999877666


Q ss_pred             eecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      .....+||+.|+|||++.+..+ +.++||||+||++|+|++|..||.+.........+..+....+    ..+++++.+|
T Consensus       171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~L  246 (476)
T 2y94_A          171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP----QYLNPSVISL  246 (476)
T ss_dssp             CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC----TTCCHHHHHH
T ss_pred             cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC----ccCCHHHHHH
Confidence            5667789999999999988765 6799999999999999999999999888888888887765433    3678999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      |.+||+.||.+|||+.++++||||+
T Consensus       247 i~~~L~~dP~~Rpt~~eil~hp~~~  271 (476)
T 2y94_A          247 LKHMLQVDPMKRATIKDIREHEWFK  271 (476)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred             HHHHcCCCchhCcCHHHHHhCHHhh
Confidence            9999999999999999999999997

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=2.1e-42  Score=334.35  Aligned_cols=231  Identities=37%  Similarity=0.649  Sum_probs=199.2

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc------------------------------------
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------------------------   90 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~------------------------------------   90 (483)
                      +.++|.+.+.||+|+||.||+|.++.+|+.+|+|++........                                    
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   82 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD   82 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence            56789999999999999999999999999999999876532211                                    


Q ss_pred             CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC-CCCcEEEeecccceec
Q 048594           91 GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD-ENATLKATDFGLAFFF  169 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~-~~~~ikl~Dfg~a~~~  169 (483)
                      .|+||||+++++|.+++.....+++..+..++.||+.||.|||++|++|+||||+||++..++ ....++|+|||.+...
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~  162 (283)
T 3bhy_A           83 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI  162 (283)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence            199999999999999998888899999999999999999999999999999999999995432 2348999999999887


Q ss_pred             cCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          170 EEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      ..........|++.|+|||++.+..++.++|+||||+++|+|++|..||.+.........+......++...++.+++.+
T Consensus       163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (283)
T 3bhy_A          163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA  242 (283)
T ss_dssp             C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHH
T ss_pred             cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHH
Confidence            65555556679999999999998889999999999999999999999999988888888887766655544456789999


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+||.+||..||.+|||+.++|+||||+
T Consensus       243 ~~li~~~l~~dp~~Rps~~~~l~h~~~~  270 (283)
T 3bhy_A          243 KDFIRRLLVKDPKRRMTIAQSLEHSWIK  270 (283)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHCHHHH
T ss_pred             HHHHHHHccCCHhHCcCHHHHHhCHHHH
Confidence            9999999999999999999999999997

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.1e-42  Score=365.33  Aligned_cols=225  Identities=28%  Similarity=0.471  Sum_probs=195.5

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYL   93 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~l   93 (483)
                      ..++|.+.+.||+|+||.||+|.++.+|+.||+|++.+...                                 ....|+
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            34689999999999999999999999999999999865321                                 111199


Q ss_pred             EEeccCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           94 KREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |||||+||+|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++.....
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl---d~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE---eCCCCeEEEecccceeccc
Confidence            999999999999998754  49999999999999999999999999999999999999   6778999999999998766


Q ss_pred             CceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC----hHHHHHHHHccccCCCCCCCCCCCH
Q 048594          172 GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----LYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+..    .......+......++    ..+++
T Consensus       339 ~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p----~~~s~  414 (576)
T 2acx_A          339 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS----ERFSP  414 (576)
T ss_dssp             TCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC----TTSCH
T ss_pred             CccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC----ccCCH
Confidence            655566789999999999998889999999999999999999999998754    2344555554443333    46899


Q ss_pred             HHHHHHHHhCccCCCCCC-----CHHHHHcCCcCCC
Q 048594          248 SAKDLIRRMLIRDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      ++++||.+||++||.+||     |++|+++||||+.
T Consensus       415 ~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             HHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             HHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence            999999999999999999     8999999999984

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=7.4e-42  Score=336.65  Aligned_cols=227  Identities=27%  Similarity=0.416  Sum_probs=176.9

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------CeEEEe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------GYLKRE   96 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~~lv~E   96 (483)
                      .++|++++.||+|+||+||+|.++.+|+.||+|++........                               .|+|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            3579999999999999999999999999999999976542211                               199999


Q ss_pred             ccCCCChHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           97 HCDGGTLVDRISDR------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        97 ~~~g~~L~~~l~~~------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      ||.| +|.+++...      ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus        84 ~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCSSCEETT
T ss_pred             ecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEE---cCCCCEEECcCccceecC
Confidence            9985 999988653      359999999999999999999999999999999999999   677899999999998765


Q ss_pred             CC-ceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC---------
Q 048594          171 EG-KVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS---------  239 (483)
Q Consensus       171 ~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~---------  239 (483)
                      .. .......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+....+..+.......+.         
T Consensus       160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  239 (317)
T 2pmi_A          160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL  239 (317)
T ss_dssp             SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred             CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence            32 233456789999999998763 5799999999999999999999999998887777766542111000         


Q ss_pred             ---------------------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          240 ---------------------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       240 ---------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                           .....+++++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  299 (317)
T 2pmi_A          240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE  299 (317)
T ss_dssp             TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhc
Confidence                                 011257889999999999999999999999999999984

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=2.5e-42  Score=340.57  Aligned_cols=233  Identities=33%  Similarity=0.614  Sum_probs=196.9

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------   88 (483)
                      ..+.++|.+.+.||+|+||.||+|.++.+++.||||++......                                    
T Consensus         6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   85 (322)
T 2ycf_A            6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD   85 (322)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence            35678899999999999999999999999999999998654210                                    


Q ss_pred             -CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           89 -DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                       ...|+|||||.+++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++..++....+||+|||++.
T Consensus        86 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A           86 AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             SSSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             CCceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence             0119999999999999999988899999999999999999999999999999999999999654445569999999998


Q ss_pred             eccCCceecccccCCcccCccccC---CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHccccCCCCCCCC
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLG---PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY-GTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~  243 (483)
                      ............||+.|+|||++.   ...++.++|||||||++|+|++|..||...... .....+..+...+....++
T Consensus       166 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (322)
T 2ycf_A          166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA  245 (322)
T ss_dssp             ECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHT
T ss_pred             ecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhh
Confidence            876554445567999999999873   456889999999999999999999999765433 3444555555444443446


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .++..+.+||.+||..||.+|||+.++|+||||.
T Consensus       246 ~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~  279 (322)
T 2ycf_A          246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ  279 (322)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGC
T ss_pred             hcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcC
Confidence            7899999999999999999999999999999997

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=3.7e-42  Score=333.66  Aligned_cols=232  Identities=37%  Similarity=0.689  Sum_probs=206.0

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------Ce
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GY   92 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~   92 (483)
                      ..+.++|.+.+.||+|++|.||+|.++.+++.||+|++........                                .|
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   97 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY   97 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence            4667899999999999999999999999999999999865432111                                18


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|+||+.+++|.+++....++++..+..++.||+.||.|||++|++|+||+|+||++...+....+||+|||.+......
T Consensus        98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~  177 (287)
T 2wei_A           98 IVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN  177 (287)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred             EEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence            99999999999999988889999999999999999999999999999999999999965545568999999999876555


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      .......|++.|+|||++.+ .++.++|+||||+++|+|++|..||.+.........+..+...++.+.+..+++++.++
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  256 (287)
T 2wei_A          178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL  256 (287)
T ss_dssp             SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHH
T ss_pred             CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHH
Confidence            44455678999999999977 58999999999999999999999999998888888888887766666667899999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      |.+||..||.+|||+.++|+||||+
T Consensus       257 i~~~l~~dp~~Rps~~ell~hp~~~  281 (287)
T 2wei_A          257 IRKMLTFHPSLRITATQCLEHPWIQ  281 (287)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHHHcccChhhCcCHHHHhcCHHHh
Confidence            9999999999999999999999997

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.8e-42  Score=338.75  Aligned_cols=224  Identities=25%  Similarity=0.356  Sum_probs=184.2

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------Cc
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DE   90 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~   90 (483)
                      .+.+.++|.+.+.||+|+||+||+|.++.+|+.||||++......                                 ..
T Consensus        52 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~  131 (311)
T 3p1a_A           52 ESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI  131 (311)
T ss_dssp             SCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             cchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCE
Confidence            345668999999999999999999999999999999998653211                                 11


Q ss_pred             CeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           91 GYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      .|+||||| +++|.+++... .++++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++...
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kl~DFG~a~~~  207 (311)
T 3p1a_A          132 LYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL---GPRGRCKLGDFGLLVEL  207 (311)
T ss_dssp             EEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CGGGCEEECCCTTCEEC
T ss_pred             EEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEccceeeeec
Confidence            18999999 55898888654 569999999999999999999999999999999999999   66779999999999887


Q ss_pred             cCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          170 EEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      ..........||+.|+|||++.+ .++.++||||+||++|+|++|..||.+..   ....+.....  +....+.+++++
T Consensus       208 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~l  281 (311)
T 3p1a_A          208 GTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE---GWQQLRQGYL--PPEFTAGLSSEL  281 (311)
T ss_dssp             C------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH---HHHHHTTTCC--CHHHHTTSCHHH
T ss_pred             ccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHhccCC--CcccccCCCHHH
Confidence            65555556679999999999987 78999999999999999999987775532   2333333322  111234688999


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+||.+||++||.+|||++++|+||||+
T Consensus       282 ~~li~~~L~~dP~~Rpt~~ell~hp~~~  309 (311)
T 3p1a_A          282 RSVLVMMLEPDPKLRATAEALLALPVLR  309 (311)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHTSGGGS
T ss_pred             HHHHHHHcCCChhhCcCHHHHHhCcccc
Confidence            9999999999999999999999999997

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=5.5e-42  Score=336.12  Aligned_cols=227  Identities=28%  Similarity=0.467  Sum_probs=186.6

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeEEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYLKR   95 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~lv~   95 (483)
                      .++|.+++.||+|+||+||+|.++.+|+.||+|++.......                                ..|+||
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF   81 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence            468999999999999999999999999999999986653211                                119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ce
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~  174 (483)
                      |||.+++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||.+...... ..
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~  158 (311)
T 4agu_A           82 EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDY  158 (311)
T ss_dssp             ECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECC-----
T ss_pred             EeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEE---cCCCCEEEeeCCCchhccCcccc
Confidence            999999999999888889999999999999999999999999999999999999   67789999999999876532 23


Q ss_pred             ecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-----------------
Q 048594          175 YEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-----------------  236 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----------------  236 (483)
                      .....||+.|+|||++.+ ..++.++||||+|+++|+|++|.+||.+.........+......                 
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (311)
T 4agu_A          159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG  238 (311)
T ss_dssp             -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred             cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence            345678999999999865 56799999999999999999999999988877666555432110                 


Q ss_pred             --CCCC--------CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          237 --FKSD--------PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       237 --~~~~--------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                        .+.+        .++.+++++.+||.+||.+||.+|||++|+|+||||+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~  289 (311)
T 4agu_A          239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE  289 (311)
T ss_dssp             CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGT
T ss_pred             CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHH
Confidence              1100        1256889999999999999999999999999999998

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=1.5e-41  Score=339.06  Aligned_cols=227  Identities=27%  Similarity=0.442  Sum_probs=192.8

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------------
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------------   89 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------------   89 (483)
                      ..++|.+++.||+|+||+||+|.++.+|+.||+|++.......                                     
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   94 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred             cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence            4578999999999999999999999999999999986554221                                     


Q ss_pred             ---cCeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           90 ---EGYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        90 ---~~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                         ..|+|||||.| +|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus        95 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~  170 (351)
T 3mi9_A           95 CKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGL  170 (351)
T ss_dssp             --CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTT
T ss_pred             CCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCCEEEccchh
Confidence               12799999987 777777654 679999999999999999999999999999999999999   6778999999999


Q ss_pred             ceeccC-----CceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC
Q 048594          166 AFFFEE-----GKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS  239 (483)
Q Consensus       166 a~~~~~-----~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (483)
                      +..+..     ........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.........+.......+.
T Consensus       171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  250 (351)
T 3mi9_A          171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP  250 (351)
T ss_dssp             CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence            987642     222344578999999998876 45799999999999999999999999999888887777665444444


Q ss_pred             CCCCCC----------------------------CHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          240 DPWPTI----------------------------SSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       240 ~~~~~~----------------------------~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ..++..                            ++.+.+||.+||+.||.+|||++|+|+||||.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  316 (351)
T 3mi9_A          251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW  316 (351)
T ss_dssp             TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred             hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcC
Confidence            433332                            67899999999999999999999999999997

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-41  Score=341.74  Aligned_cols=229  Identities=26%  Similarity=0.422  Sum_probs=188.6

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------   88 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------   88 (483)
                      ....+.++|.+++.||+|+||.||+|.++.+|+.||||.+......                                  
T Consensus        19 ~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~   98 (367)
T 1cm8_A           19 TAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDET   98 (367)
T ss_dssp             SEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSS
T ss_pred             ceeeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCc
Confidence            4456788999999999999999999999999999999998543110                                  


Q ss_pred             ----CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           89 ----DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        89 ----~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                          ...|+||||+ |++|.+++.. .++++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||
T Consensus        99 ~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg  173 (367)
T 1cm8_A           99 LDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFG  173 (367)
T ss_dssp             TTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCT
T ss_pred             cccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE---cCCCCEEEEeee
Confidence                1129999999 7799999876 579999999999999999999999999999999999999   677899999999


Q ss_pred             cceeccCCceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-------
Q 048594          165 LAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-------  236 (483)
Q Consensus       165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-------  236 (483)
                      +++.....  ....++|+.|+|||++.+ ..++.++||||+||++|+|++|++||.+.+....+..+......       
T Consensus       174 ~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~  251 (367)
T 1cm8_A          174 LARQADSE--MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ  251 (367)
T ss_dssp             TCEECCSS--CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             cccccccc--cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence            99876432  345688999999999876 67899999999999999999999999998887777666542111       


Q ss_pred             ----------------CCC----CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          237 ----------------FKS----DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       237 ----------------~~~----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                      ...    ..++.+++.+.+||.+||..||.+|||++++|+||||+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~  313 (367)
T 1cm8_A          252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES  313 (367)
T ss_dssp             TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHh
Confidence                            011    123567899999999999999999999999999999983

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1.6e-42  Score=351.74  Aligned_cols=233  Identities=25%  Similarity=0.347  Sum_probs=189.8

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------   90 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------   90 (483)
                      ..+....+|.+.+.||+|+||+||+|.+..++. +|+|.+........                                
T Consensus        34 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~  112 (394)
T 4e7w_A           34 TGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF  112 (394)
T ss_dssp             SCCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred             CCCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence            445667789999999999999999999987776 88887754321110                                


Q ss_pred             CeEEEeccCCCChHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           91 GYLKREHCDGGTLVDRIS----DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~----~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                      .|+|||||.++ +.+.+.    ....+++..++.++.||+.||.|||++||+||||||+|||++  ..++.+||+|||++
T Consensus       113 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~--~~~~~~kL~DFG~a  189 (394)
T 4e7w_A          113 LNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD--PPSGVLKLIDFGSA  189 (394)
T ss_dssp             EEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTC
T ss_pred             EEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc--CCCCcEEEeeCCCc
Confidence            26999999874 444332    356899999999999999999999999999999999999994  25779999999999


Q ss_pred             eeccCCceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc-----------
Q 048594          167 FFFEEGKVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE-----------  234 (483)
Q Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~-----------  234 (483)
                      .............||+.|+|||++.+. .++.++||||+||++|+|++|++||.+.+....+..+....           
T Consensus       190 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~  269 (394)
T 4e7w_A          190 KILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM  269 (394)
T ss_dssp             EECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred             ccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence            887666555667899999999998664 58999999999999999999999999988777766665421           


Q ss_pred             ------cCCCC---C-----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          235 ------IDFKS---D-----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       235 ------~~~~~---~-----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                            ..++.   .     ..+.+++++.+||.+||++||.+|||+.|+|+||||+..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred             ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence                  00110   0     113478999999999999999999999999999999843

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.6e-41  Score=331.07  Aligned_cols=224  Identities=31%  Similarity=0.580  Sum_probs=190.4

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------------   87 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------------   87 (483)
                      .++|.+.+.||+|+||.||+|.++.+|+.||||++.....                                        
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999865421                                        


Q ss_pred             ------------------CCcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEE
Q 048594           88 ------------------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF  149 (483)
Q Consensus        88 ------------------~~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll  149 (483)
                                        ....|+|||||++++|.+++. ..++++..+..++.||+.||.|||++||+||||||+||++
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~  170 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV  170 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence                              011189999999999988654 4579999999999999999999999999999999999999


Q ss_pred             eeCCCCCcEEEeecccceeccCCc-eecccccCCcccCccccCCCC---CCCcCchHHHHHHHHHHhhCCCCCCCCChHH
Q 048594          150 TTDDENATLKATDFGLAFFFEEGK-VYEEVVGTPLYMAPELLGPCK---YGKEIDIWSAGLILYNLLSGAQPFWAESLYG  225 (483)
Q Consensus       150 ~~~~~~~~ikl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslGvil~~ll~g~~pf~~~~~~~  225 (483)
                         +.++.+||+|||++....... ......||+.|+|||++.+..   ++.++|||||||++|+|++|..||.+.....
T Consensus       171 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~  247 (298)
T 2zv2_A          171 ---GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC  247 (298)
T ss_dssp             ---CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ---CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence               677899999999998765432 334568999999999997654   3678999999999999999999999888777


Q ss_pred             HHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          226 TLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       226 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ....+......++.  .+.+++++.+||.+||..||.+|||+.|+|+||||+
T Consensus       248 ~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          248 LHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            77777666554432  357899999999999999999999999999999995

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.7e-42  Score=343.31  Aligned_cols=237  Identities=31%  Similarity=0.552  Sum_probs=199.6

Q ss_pred             cccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------
Q 048594           41 GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------   87 (483)
Q Consensus        41 ~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------   87 (483)
                      +.....+.++|.+.+.||+|+||+||+|.++.++..+|+|++.+...                                 
T Consensus        18 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~   97 (345)
T 3hko_A           18 GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVY   97 (345)
T ss_dssp             CBCHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CchhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhh
Confidence            44456788999999999999999999999999999999999865321                                 


Q ss_pred             --CCcCeEEEeccCCCChHHHHhc----------------------------------------CCCCCHHHHHHHHHHH
Q 048594           88 --SDEGYLKREHCDGGTLVDRISD----------------------------------------RERYTERAAASVFRSV  125 (483)
Q Consensus        88 --~~~~~lv~E~~~g~~L~~~l~~----------------------------------------~~~l~~~~~~~i~~qi  125 (483)
                        ....|+|||||+|++|.+++..                                        ...+++..++.++.||
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  177 (345)
T 3hko_A           98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI  177 (345)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence              0111999999999999999852                                        1124678899999999


Q ss_pred             HHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-----eecccccCCcccCccccCC--CCCCCc
Q 048594          126 VNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-----VYEEVVGTPLYMAPELLGP--CKYGKE  198 (483)
Q Consensus       126 l~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~  198 (483)
                      +.||.|||+++|+||||||+||++..+ ....+||+|||++..+....     ......||+.|+|||++.+  ..++.+
T Consensus       178 ~~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  256 (345)
T 3hko_A          178 FSALHYLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK  256 (345)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEESCS-SSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred             HHHHHHHHHCCccccCCChhhEEEecC-CCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence            999999999999999999999999532 23389999999998764321     1235679999999999865  578899


Q ss_pred             CchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       199 ~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      +|||||||++|+|++|..||.+.........+......++.+.+..+++++.+||.+||..||.+|||+.++|+||||+.
T Consensus       257 ~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~  336 (345)
T 3hko_A          257 CDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ  336 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhcc
Confidence            99999999999999999999999998988888888877777666778999999999999999999999999999999984

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=3.5e-41  Score=332.49  Aligned_cols=224  Identities=29%  Similarity=0.540  Sum_probs=193.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------cCeEEEecc
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------EGYLKREHC   98 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------~~~lv~E~~   98 (483)
                      ..|...+.||+|+||.||+|.++.+|+.||||++.......                              ..|+||||+
T Consensus        45 ~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  124 (321)
T 2c30_A           45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL  124 (321)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecC
Confidence            35888999999999999999999999999999987544221                              119999999


Q ss_pred             CCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-eecc
Q 048594           99 DGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYEE  177 (483)
Q Consensus        99 ~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~~~  177 (483)
                      +|++|.+++.. .++++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++....... ....
T Consensus       125 ~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~  200 (321)
T 2c30_A          125 QGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVPKRKS  200 (321)
T ss_dssp             CSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred             CCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCcEEEeeeeeeeecccCcccccc
Confidence            99999998865 479999999999999999999999999999999999999   667899999999998765432 2345


Q ss_pred             cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhC
Q 048594          178 VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML  257 (483)
Q Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  257 (483)
                      ..||+.|+|||++.+..++.++||||||+++|+|++|..||.+.........+........ .....+++.+.+||.+||
T Consensus       201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l  279 (321)
T 2c30_A          201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKL-KNSHKVSPVLRDFLERML  279 (321)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCC-TTGGGSCHHHHHHHHHHS
T ss_pred             ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCc-CccccCCHHHHHHHHHHc
Confidence            6799999999999988899999999999999999999999998888777777665433211 123467899999999999


Q ss_pred             ccCCCCCCCHHHHHcCCcCC
Q 048594          258 IRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       258 ~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +.||.+|||+.++|+||||.
T Consensus       280 ~~dp~~Rps~~ell~hp~~~  299 (321)
T 2c30_A          280 VRDPQERATAQELLDHPFLL  299 (321)
T ss_dssp             CSSTTTSCCHHHHHTSGGGG
T ss_pred             cCChhhCcCHHHHhcChhhc
Confidence            99999999999999999997

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.4e-41  Score=337.39  Aligned_cols=220  Identities=28%  Similarity=0.470  Sum_probs=191.2

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc----------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE----------------------------------   90 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------------------------------   90 (483)
                      ..+.++|.+.+.||+|+||+||+|.++.+|+.||||++........                                  
T Consensus        20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~   99 (335)
T 3dls_A           20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE   99 (335)
T ss_dssp             THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            4577899999999999999999999999999999999987542111                                  


Q ss_pred             ----CeEEEeccCCC-ChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           91 ----GYLKREHCDGG-TLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        91 ----~~lv~E~~~g~-~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                          .|+||||+.+| +|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus       100 ~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~  176 (335)
T 3dls_A          100 NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGS  176 (335)
T ss_dssp             CSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTT
T ss_pred             eCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEE---cCCCcEEEeeccc
Confidence                18999999766 999999998899999999999999999999999999999999999999   6678999999999


Q ss_pred             ceeccCCceecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCC
Q 048594          166 AFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       166 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  244 (483)
                      +............+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.....      .    ..........
T Consensus       177 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~----~~~~~~~~~~  246 (335)
T 3dls_A          177 AAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------T----VEAAIHPPYL  246 (335)
T ss_dssp             CEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------G----TTTCCCCSSC
T ss_pred             ceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------H----HhhccCCCcc
Confidence            998776665666789999999999988776 7899999999999999999999965221      1    1111222345


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +++++.+||.+||.+||.+|||+.++++||||+
T Consensus       247 ~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~  279 (335)
T 3dls_A          247 VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVT  279 (335)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTT
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcCcccc
Confidence            799999999999999999999999999999998

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=1.6e-42  Score=340.27  Aligned_cols=231  Identities=24%  Similarity=0.369  Sum_probs=194.2

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc----------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE----------------------------------   90 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------------------------------   90 (483)
                      ..+.++|.+.+.||+|+||.||+|.++.+++.||||++........                                  
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   87 (311)
T 3ork_A            8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA   87 (311)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT
T ss_pred             ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC
Confidence            5678899999999999999999999999999999999976432110                                  


Q ss_pred             ---CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           91 ---GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        91 ---~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                         .|+|||||+|++|.+++...+++++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.
T Consensus        88 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~a~  164 (311)
T 3ork_A           88 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIAR  164 (311)
T ss_dssp             EEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---ETTSCEEECCCSCC-
T ss_pred             CcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEE---cCCCCEEEeeccCcc
Confidence               07999999999999999988899999999999999999999999999999999999999   566789999999998


Q ss_pred             eccCCc----eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCC
Q 048594          168 FFEEGK----VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       168 ~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  243 (483)
                      ......    ......||+.|+|||++.+..++.++||||||+++|+|++|..||.+.........+.......+....+
T Consensus       165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  244 (311)
T 3ork_A          165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE  244 (311)
T ss_dssp             -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHST
T ss_pred             cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccC
Confidence            664322    1233568999999999988889999999999999999999999999988877777666655443333345


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      .+++++.++|.+||..||.+||++.++|.|+|++.
T Consensus       245 ~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          245 GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            68999999999999999999999999999999974

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=3.6e-42  Score=341.75  Aligned_cols=232  Identities=36%  Similarity=0.640  Sum_probs=172.1

Q ss_pred             cccccceEEee-eecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------CCcCeE
Q 048594           45 EDIKLHFTIAE-ELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------SDEGYL   93 (483)
Q Consensus        45 ~~i~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------~~~~~l   93 (483)
                      ..+.++|.+.+ .||+|+||+||+|.++.+|+.||||++.....                              ....|+
T Consensus        24 ~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l  103 (336)
T 3fhr_A           24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLI  103 (336)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             ccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence            36778899965 69999999999999999999999999865320                              011289


Q ss_pred             EEeccCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           94 KREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |||||.|++|.+++....  .+++..++.++.||+.||.|||++||+||||||+||++..++..+.+||+|||++.....
T Consensus       104 v~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~  183 (336)
T 3fhr_A          104 IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ  183 (336)
T ss_dssp             EEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred             EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence            999999999999998764  699999999999999999999999999999999999997655567799999999987653


Q ss_pred             CceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHH----HHHHHccccCCCCCCCCCCCH
Q 048594          172 GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGT----LTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      . ......||+.|+|||++.+..++.++||||||+++|+|++|..||.+......    ...+......++.+.+..+++
T Consensus       184 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (336)
T 3fhr_A          184 N-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSE  262 (336)
T ss_dssp             ---------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCH
T ss_pred             c-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCH
Confidence            3 23456789999999999887889999999999999999999999977654433    333444445556666678999


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ++.+||.+||..||.+|||+.++|+||||+
T Consensus       263 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  292 (336)
T 3fhr_A          263 DAKQLIRLLLKTDPTERLTITQFMNHPWIN  292 (336)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence            999999999999999999999999999998

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=6.5e-42  Score=330.49  Aligned_cols=223  Identities=30%  Similarity=0.553  Sum_probs=193.9

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv   94 (483)
                      .++|.+.+.||+|+||+||+|.++.++..+|+|++.....                                 ....|+|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            4689999999999999999999999999999999854310                                 1112999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      |||+++++|.+++....++++..+..++.||+.||.|||++||+||||||+||++   +.++.++|+|||++...... .
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l~Dfg~~~~~~~~-~  163 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSS-R  163 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE---CTTSCEEECSCCEESCC-----
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE---cCCCCEEEEeccccccCCcc-c
Confidence            9999999999999988899999999999999999999999999999999999999   67789999999988655433 2


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .....|++.|+|||.+.+..++.++||||||+++|+|++|..||...........+......++    ..+++.+.+||.
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~  239 (279)
T 3fdn_A          164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS  239 (279)
T ss_dssp             ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCHHHHHHHH
T ss_pred             ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC----CcCCHHHHHHHH
Confidence            3456789999999999988889999999999999999999999999888888888877655443    357899999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcCCC
Q 048594          255 RMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      +||..||.+|||+.|+|+||||+.
T Consensus       240 ~~l~~~p~~Rps~~e~l~h~~~~~  263 (279)
T 3fdn_A          240 RLLKHNPSQRPMLREVLEHPWITA  263 (279)
T ss_dssp             HHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred             HHhccChhhCCCHHHHhhCccccC
Confidence            999999999999999999999983

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=5.4e-42  Score=351.61  Aligned_cols=232  Identities=23%  Similarity=0.369  Sum_probs=192.5

Q ss_pred             ccccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------------------
Q 048594           40 LGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------------------   87 (483)
Q Consensus        40 ~~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------------------   87 (483)
                      .....+.+..+|.+++.||+|+||+||+|.+..+++.||||++.....                                
T Consensus        88 ~~~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~  167 (429)
T 3kvw_A           88 VQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLEN  167 (429)
T ss_dssp             CCCTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEE
T ss_pred             cccCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEee
Confidence            344557788999999999999999999999999999999999965421                                


Q ss_pred             ---CCcCeEEEeccCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCc--EEE
Q 048594           88 ---SDEGYLKREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENAT--LKA  160 (483)
Q Consensus        88 ---~~~~~lv~E~~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~--ikl  160 (483)
                         ....|+|||||.+ +|.+++....  .+++..++.++.||+.||.|||+++|+||||||+|||+.   ..+.  +||
T Consensus       168 ~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~---~~~~~~vkL  243 (429)
T 3kvw_A          168 FTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLK---QQGRSGIKV  243 (429)
T ss_dssp             EEETTEEEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEES---STTSCCEEE
T ss_pred             cccCCeEEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc---cCCCcceEE
Confidence               0111899999975 8999998753  499999999999999999999999999999999999994   4444  999


Q ss_pred             eecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC--
Q 048594          161 TDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK--  238 (483)
Q Consensus       161 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--  238 (483)
                      +|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+....-..+  
T Consensus       244 ~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~  321 (429)
T 3kvw_A          244 IDFGSSCYEHQR--VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQK  321 (429)
T ss_dssp             CCCTTCEETTCC--CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             eecccceecCCc--ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence            999999765432  3456899999999999888899999999999999999999999999888777666553210000  


Q ss_pred             ----------------------------------------------C--CC-----CCCCCHHHHHHHHHhCccCCCCCC
Q 048594          239 ----------------------------------------------S--DP-----WPTISSSAKDLIRRMLIRDPNNQI  265 (483)
Q Consensus       239 ----------------------------------------------~--~~-----~~~~~~~~~~li~~~L~~dP~~R~  265 (483)
                                                                    .  ..     ....++.+.+||.+||++||.+||
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rp  401 (429)
T 3kvw_A          322 LLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRM  401 (429)
T ss_dssp             HHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCC
Confidence                                                          0  00     012378899999999999999999


Q ss_pred             CHHHHHcCCcCC
Q 048594          266 TVAQILKHPWLN  277 (483)
Q Consensus       266 t~~e~L~h~~~~  277 (483)
                      |++|+|+||||+
T Consensus       402 ta~e~L~Hpw~~  413 (429)
T 3kvw_A          402 TPGQALRHPWLR  413 (429)
T ss_dssp             CHHHHHTSTTTC
T ss_pred             CHHHHhCChhhc
Confidence            999999999998

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.3e-41  Score=344.43  Aligned_cols=229  Identities=18%  Similarity=0.272  Sum_probs=186.7

Q ss_pred             cccceEEeeeeccc--CceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCe
Q 048594           47 IKLHFTIAEELCRG--ESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGY   92 (483)
Q Consensus        47 i~~~y~~~~~lg~G--~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~   92 (483)
                      -.++|.+++.||+|  +||+||+|.++.+|+.||||++.......                                ..|
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            35689999999999  99999999999999999999997653211                                118


Q ss_pred             EEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           93 LKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      +|||||+|++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||.+....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll---~~~~~~kl~dfg~~~~~~  179 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMI  179 (389)
T ss_dssp             EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCGGGCEECE
T ss_pred             EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccccceeec
Confidence            999999999999999875  679999999999999999999999999999999999999   677899999999886543


Q ss_pred             CCc--------eecccccCCcccCccccCC--CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCC---
Q 048594          171 EGK--------VYEEVVGTPLYMAPELLGP--CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDF---  237 (483)
Q Consensus       171 ~~~--------~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~---  237 (483)
                      ...        .....+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.........+..+....   
T Consensus       180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  259 (389)
T 3gni_B          180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD  259 (389)
T ss_dssp             ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------
T ss_pred             cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccc
Confidence            221        1223478999999999987  578999999999999999999999998766555444433222110   


Q ss_pred             ---------------------------------------CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          238 ---------------------------------------KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       238 ---------------------------------------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                                             ..+.+..+++++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~  339 (389)
T 3gni_B          260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  339 (389)
T ss_dssp             ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred             ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence                                                   00123457899999999999999999999999999999983

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.2e-41  Score=352.27  Aligned_cols=231  Identities=29%  Similarity=0.415  Sum_probs=173.9

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------   88 (483)
                      ..+.++|.+++.||+|+||+||+|.++.+|+.||||++......                                    
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  128 (458)
T 3rp9_A           49 WQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEK  128 (458)
T ss_dssp             CCSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred             CccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCccc
Confidence            46778999999999999999999999999999999998653110                                    


Q ss_pred             -CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           89 -DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                       ...|+||||+. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++
T Consensus       129 ~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl---~~~~~~kl~DFGla~  204 (458)
T 3rp9_A          129 FDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLAR  204 (458)
T ss_dssp             CCCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTTCB
T ss_pred             CceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE---CCCCCEeecccccch
Confidence             12399999985 5899999988899999999999999999999999999999999999999   677899999999998


Q ss_pred             eccCCc----------------------------eecccccCCcccCcccc-CCCCCCCcCchHHHHHHHHHHhh-----
Q 048594          168 FFEEGK----------------------------VYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLS-----  213 (483)
Q Consensus       168 ~~~~~~----------------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslGvil~~ll~-----  213 (483)
                      ......                            .....+||++|+|||++ .+..++.++|||||||++|+|++     
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~  284 (458)
T 3rp9_A          205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN  284 (458)
T ss_dssp             CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTT
T ss_pred             hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccc
Confidence            764221                            22345789999999976 55678999999999999999998     


Q ss_pred             ------CCCCCCCCCh--------------------HHHHHHHHccc--------------------cCCC-------CC
Q 048594          214 ------GAQPFWAESL--------------------YGTLTAIMSRE--------------------IDFK-------SD  240 (483)
Q Consensus       214 ------g~~pf~~~~~--------------------~~~~~~i~~~~--------------------~~~~-------~~  240 (483)
                            |.++|.+...                    ...+..+....                    ..++       ..
T Consensus       285 ~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (458)
T 3rp9_A          285 VAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAE  364 (458)
T ss_dssp             CSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGG
T ss_pred             ccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHH
Confidence                  7777766441                    12222221100                    0000       11


Q ss_pred             CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       241 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                      .++.+++++.+||.+||.+||.+|||++|+|+||||+..
T Consensus       365 ~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~  403 (458)
T 3rp9_A          365 RFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV  403 (458)
T ss_dssp             GSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence            245679999999999999999999999999999999843

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=4.8e-41  Score=345.00  Aligned_cols=231  Identities=31%  Similarity=0.449  Sum_probs=183.4

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------   88 (483)
                      -.+.++|.+.+.||+|+||+||+|.++.+|+.||||++......                                    
T Consensus        22 ~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  101 (432)
T 3n9x_A           22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK  101 (432)
T ss_dssp             CCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred             ceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCc
Confidence            46778999999999999999999999999999999999653110                                    


Q ss_pred             -CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           89 -DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                       ...|+|||||.+ +|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++
T Consensus       102 ~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl---~~~~~~kL~DFGla~  177 (432)
T 3n9x_A          102 FDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLAR  177 (432)
T ss_dssp             CCCEEEEEECCSE-EHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCE
T ss_pred             CCeEEEEEecCCc-CHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE---CCCCCEEEccCCCcc
Confidence             123999999975 999999988889999999999999999999999999999999999999   677899999999998


Q ss_pred             eccCCc-----------------------eecccccCCcccCcccc-CCCCCCCcCchHHHHHHHHHHhhC---------
Q 048594          168 FFEEGK-----------------------VYEEVVGTPLYMAPELL-GPCKYGKEIDIWSAGLILYNLLSG---------  214 (483)
Q Consensus       168 ~~~~~~-----------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslGvil~~ll~g---------  214 (483)
                      ......                       .....+||++|+|||++ ....++.++||||+||++|+|++|         
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~  257 (432)
T 3n9x_A          178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPT  257 (432)
T ss_dssp             EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGG
T ss_pred             cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccc
Confidence            765332                       12456899999999985 555689999999999999999984         


Q ss_pred             --CCCCCCCC-----------------hHHHHHHHHcccc--------------------CCCCC-------CCCCCCHH
Q 048594          215 --AQPFWAES-----------------LYGTLTAIMSREI--------------------DFKSD-------PWPTISSS  248 (483)
Q Consensus       215 --~~pf~~~~-----------------~~~~~~~i~~~~~--------------------~~~~~-------~~~~~~~~  248 (483)
                        .++|.+.+                 ....+..+....-                    .++..       .++.++++
T Consensus       258 ~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  337 (432)
T 3n9x_A          258 NRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDD  337 (432)
T ss_dssp             GCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHH
T ss_pred             cccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHH
Confidence              44444432                 1122222211000                    00000       13568999


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                      +.+||.+||++||.+|||++|+|+||||+..
T Consensus       338 ~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  368 (432)
T 3n9x_A          338 GINLLESMLKFNPNKRITIDQALDHPYLKDV  368 (432)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTCGGGTTT
T ss_pred             HHHHHHHHhcCCcccCCCHHHHhcChhhhhc
Confidence            9999999999999999999999999999843

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=7.9e-42  Score=357.81  Aligned_cols=224  Identities=27%  Similarity=0.479  Sum_probs=193.9

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv   94 (483)
                      .++|.+.+.||+|+||.||+|.++.+|+.||+|++.+...                                 ....|+|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            4789999999999999999999999999999999965321                                 1111999


Q ss_pred             EeccCCCChHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           95 REHCDGGTLVDRISDR----ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~----~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      ||||+||+|.+++...    ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..+.
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl---~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE---eCCCCEEEeecceeeecc
Confidence            9999999999999764    469999999999999999999999999999999999999   677899999999998875


Q ss_pred             CCce-ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC----hHHHHHHHHccccCCCCCCCCCC
Q 048594          171 EGKV-YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES----LYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       171 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      .... ....+||+.|+|||++.+..++.++|+|||||++|+|++|.+||.+..    .......+......++    +.+
T Consensus       341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p----~~~  416 (543)
T 3c4z_A          341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKF  416 (543)
T ss_dssp             TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC----TTS
T ss_pred             CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC----ccc
Confidence            5433 234589999999999999889999999999999999999999998753    3455666666555443    478


Q ss_pred             CHHHHHHHHHhCccCCCCCCC-----HHHHHcCCcCCC
Q 048594          246 SSSAKDLIRRMLIRDPNNQIT-----VAQILKHPWLNY  278 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t-----~~e~L~h~~~~~  278 (483)
                      ++++++||.+||++||.+||+     ++++++||||+.
T Consensus       417 s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          417 SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             CHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence            999999999999999999996     589999999983

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.7e-41  Score=325.14  Aligned_cols=227  Identities=31%  Similarity=0.556  Sum_probs=191.4

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKR   95 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~   95 (483)
                      +.++|.+.+.||+|++|.||+|.++.+|+.||+|++.......                               ..|+|+
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence            5578999999999999999999999999999999986543211                               118999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--  173 (483)
                      ||++|++|.+++.....+++..+..++.||+.||.|||++|++|+||+|+||++   +.++.++|+|||.+.......  
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~~~~  161 (276)
T 2yex_A           85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE  161 (276)
T ss_dssp             ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEETTEE
T ss_pred             EecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEE---ccCCCEEEeeCCCccccCCCcch
Confidence            999999999999888889999999999999999999999999999999999999   667889999999998764322  


Q ss_pred             -eecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          174 -VYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLY-GTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       174 -~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                       ......|++.|+|||.+.+..+ +.++|+||||+++|+|++|..||...... .....+......  ...++.+++.+.
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  239 (276)
T 2yex_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--LNPWKKIDSAPL  239 (276)
T ss_dssp             CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--STTGGGSCHHHH
T ss_pred             hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--cCchhhcCHHHH
Confidence             2234578999999999987665 67899999999999999999999876543 233333333222  223457899999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      ++|.+||..||.+|||+.++++||||+.
T Consensus       240 ~li~~~l~~~p~~Rps~~~il~~~~~~~  267 (276)
T 2yex_A          240 ALLHKILVENPSARITIPDIKKDRWYNK  267 (276)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             HHHHHHCCCCchhCCCHHHHhcCccccC
Confidence            9999999999999999999999999983

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1.7e-41  Score=342.85  Aligned_cols=232  Identities=23%  Similarity=0.266  Sum_probs=191.6

Q ss_pred             ccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-----------------C----------------
Q 048594           42 KAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-----------------S----------------   88 (483)
Q Consensus        42 ~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----------------~----------------   88 (483)
                      ...+.+.++|.+.+.||+|+||+||+|.++.+|+.||||++.....                 .                
T Consensus        47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  126 (382)
T 2vx3_A           47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM  126 (382)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred             ecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence            4456788999999999999999999999999999999999965320                 0                


Q ss_pred             --CcCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH--HCCCeeeCCCCCeEEEeeCCCCCcEEEee
Q 048594           89 --DEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACH--SNGIMHRDLKPENFIFTTDDENATLKATD  162 (483)
Q Consensus        89 --~~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH--~~~ivH~dlkp~NIll~~~~~~~~ikl~D  162 (483)
                        ...|+|||||.| +|.+++...  ..+++..+..++.||+.||.|||  ..||+||||||+|||+.. +..+.+||+|
T Consensus       127 ~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~-~~~~~~kL~D  204 (382)
T 2vx3_A          127 FRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-PKRSAIKIVD  204 (382)
T ss_dssp             ETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS-TTSCCEEECC
T ss_pred             cCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec-CCCCcEEEEe
Confidence              111899999975 999999865  46999999999999999999999  478999999999999953 2356899999


Q ss_pred             cccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC----
Q 048594          163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK----  238 (483)
Q Consensus       163 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~----  238 (483)
                      ||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+....+..+.......+    
T Consensus       205 FG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~  282 (382)
T 2vx3_A          205 FGSSCQLGQR--IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL  282 (382)
T ss_dssp             CTTCEETTCC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred             ccCceecccc--cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            9999876432  3456899999999999998899999999999999999999999999888777776654211100    


Q ss_pred             --------------C-----------------CCCCC-------------------------CCHHHHHHHHHhCccCCC
Q 048594          239 --------------S-----------------DPWPT-------------------------ISSSAKDLIRRMLIRDPN  262 (483)
Q Consensus       239 --------------~-----------------~~~~~-------------------------~~~~~~~li~~~L~~dP~  262 (483)
                                    .                 +....                         .++++++||.+||++||.
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~  362 (382)
T 2vx3_A          283 DQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPK  362 (382)
T ss_dssp             TTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTT
T ss_pred             HhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChh
Confidence                          0                 00000                         014789999999999999


Q ss_pred             CCCCHHHHHcCCcCC
Q 048594          263 NQITVAQILKHPWLN  277 (483)
Q Consensus       263 ~R~t~~e~L~h~~~~  277 (483)
                      +|||++|+|+||||+
T Consensus       363 ~Rpta~e~L~hp~f~  377 (382)
T 2vx3_A          363 TRIQPYYALQHSFFK  377 (382)
T ss_dssp             TSCCHHHHTTSGGGC
T ss_pred             hCCCHHHHhcCcccc
Confidence            999999999999998

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=2.9e-41  Score=341.94  Aligned_cols=224  Identities=26%  Similarity=0.478  Sum_probs=183.3

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------C-------------cC
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------D-------------EG   91 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------~-------------~~   91 (483)
                      ....+|.+.+.||+|+||+||+|.+.. ++.||||++......                     .             ..
T Consensus        53 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~  131 (390)
T 2zmd_A           53 VKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI  131 (390)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             ccCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEE
Confidence            344679999999999999999999875 899999999654311                     0             11


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+||| |.+++|.+++.....+++..+..++.||+.||.|||+++|+||||||+|||+.    .+.+||+|||++..+..
T Consensus       132 ~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~----~~~~kl~DFG~a~~~~~  206 (390)
T 2zmd_A          132 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQP  206 (390)
T ss_dssp             EEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES----SSCEEECCCSSSCCC--
T ss_pred             EEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE----CCeEEEEecCccccccC
Confidence            89999 56789999999988999999999999999999999999999999999999993    36899999999987653


Q ss_pred             Cc---eecccccCCcccCccccCC-----------CCCCCcCchHHHHHHHHHHhhCCCCCCCCC-hHHHHHHHHccccC
Q 048594          172 GK---VYEEVVGTPLYMAPELLGP-----------CKYGKEIDIWSAGLILYNLLSGAQPFWAES-LYGTLTAIMSREID  236 (483)
Q Consensus       172 ~~---~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwslGvil~~ll~g~~pf~~~~-~~~~~~~i~~~~~~  236 (483)
                      ..   .....+||+.|+|||++.+           ..++.++|||||||++|+|++|..||.... ....+..+......
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~  286 (390)
T 2zmd_A          207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE  286 (390)
T ss_dssp             -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSC
T ss_pred             CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCcccc
Confidence            32   1235679999999999864           357889999999999999999999998754 33455566554443


Q ss_pred             CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          237 FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       237 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ...+  ...+.++.+||.+||..||.+|||+.|+|+||||.
T Consensus       287 ~~~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  325 (390)
T 2zmd_A          287 IEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  325 (390)
T ss_dssp             CCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             CCCC--ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcc
Confidence            3322  34578999999999999999999999999999997

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=2.3e-41  Score=325.81  Aligned_cols=225  Identities=31%  Similarity=0.556  Sum_probs=188.3

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~   92 (483)
                      -..++|.+.+.||+|++|.||+|.++.+|+.||+|++.....                                 ....|
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   87 (276)
T 2h6d_A            8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFF   87 (276)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             ceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEE
Confidence            345789999999999999999999999999999999865321                                 01119


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|||||.+++|.+++...+++++..+..++.||+.||.|||++|++|+||+|+||++   +.++.++|+|||.+......
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~  164 (276)
T 2h6d_A           88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDG  164 (276)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE---CTTSCEEECCCCGGGCCCC-
T ss_pred             EEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE---CCCCCEEEeecccccccCCC
Confidence            999999999999999888889999999999999999999999999999999999999   67789999999999877655


Q ss_pred             ceecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      .......|++.|+|||.+.+..+ +.++|+||||+++|+|++|..||...........+.......+    ..++..+.+
T Consensus       165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~  240 (276)
T 2h6d_A          165 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVAT  240 (276)
T ss_dssp             ------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred             cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc----hhcCHHHHH
Confidence            54456678999999999987665 5799999999999999999999998888787777776654433    357899999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +|.+||+.||.+|||+.++++||||+
T Consensus       241 li~~~l~~~p~~Rps~~~~l~h~~~~  266 (276)
T 2h6d_A          241 LLMHMLQVDPLKRATIKDIREHEWFK  266 (276)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHHHHccCChhhCCCHHHHHhChhhc
Confidence            99999999999999999999999997

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.3e-41  Score=341.60  Aligned_cols=232  Identities=28%  Similarity=0.432  Sum_probs=177.8

Q ss_pred             ccccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------------------
Q 048594           40 LGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------------------   87 (483)
Q Consensus        40 ~~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------------------   87 (483)
                      +......+.++|.+++.||+|+||.||+|.++.+|+.||||++.....                                
T Consensus        20 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~   99 (367)
T 2fst_X           20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP   99 (367)
T ss_dssp             ETTEEEEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECS
T ss_pred             ecCcccCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec
Confidence            444566788999999999999999999999999999999999865310                                


Q ss_pred             ------CCcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEe
Q 048594           88 ------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKAT  161 (483)
Q Consensus        88 ------~~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~  161 (483)
                            ....|+|+|++ +++|.+++.. .++++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+
T Consensus       100 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kL~  174 (367)
T 2fst_X          100 ARSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKIL  174 (367)
T ss_dssp             CSSGGGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEEC
T ss_pred             CCccccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEE---CCCCCEEEe
Confidence                  01239999999 6799998876 579999999999999999999999999999999999999   677899999


Q ss_pred             ecccceeccCCceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC----
Q 048594          162 DFGLAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID----  236 (483)
Q Consensus       162 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~----  236 (483)
                      |||++......  .....||+.|+|||++.+ ..++.++||||+||++|+|++|.+||.+.+....+..+......    
T Consensus       175 DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~  252 (367)
T 2fst_X          175 DFGLARHTADE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE  252 (367)
T ss_dssp             C-----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred             ecccccccccc--CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            99999875432  345689999999999876 57899999999999999999999999998887777666542110    


Q ss_pred             -------------------CCCC----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          237 -------------------FKSD----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       237 -------------------~~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                         .+..    .++.+++.+.+||.+||..||.+|||+.++|+||||+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~  317 (367)
T 2fst_X          253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  317 (367)
T ss_dssp             HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhh
Confidence                               0111    12457899999999999999999999999999999983

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=2.9e-41  Score=326.82  Aligned_cols=223  Identities=29%  Similarity=0.559  Sum_probs=197.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv   94 (483)
                      .++|.+.+.||+|+||.||+|.+..++..||+|++.....                                 ....|+|
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            3679999999999999999999999999999999864310                                 0111999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      |||+++++|.+++...+.+++..+..++.||+.||.|||++|++|+||+|+||++   +.++.++|+|||.+...... .
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~~-~  168 (284)
T 2vgo_A           93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM---GYKGELKIADFGWSVHAPSL-R  168 (284)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECSSS-C
T ss_pred             EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---cCCCCEEEecccccccCccc-c
Confidence            9999999999999988889999999999999999999999999999999999999   66778999999999765433 2


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .....|++.|+|||++.+..++.++|+||||+++|+|++|..||...........+......++    +.++..++++|.
T Consensus       169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~  244 (284)
T 2vgo_A          169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLIS  244 (284)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHHHH
T ss_pred             cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC----CcCCHHHHHHHH
Confidence            3456789999999999988899999999999999999999999998888888877777655443    468899999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcCCC
Q 048594          255 RMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      +||..||.+|||+.++++||||+.
T Consensus       245 ~~l~~~p~~Rps~~~ll~h~~~~~  268 (284)
T 2vgo_A          245 KLLRYHPPQRLPLKGVMEHPWVKA  268 (284)
T ss_dssp             HHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred             HHhhcCHhhCCCHHHHhhCHHHHh
Confidence            999999999999999999999983

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.5e-40  Score=340.10  Aligned_cols=231  Identities=26%  Similarity=0.366  Sum_probs=190.6

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------Ce
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GY   92 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~   92 (483)
                      .....+|.+.+.||+|+||+||+|.++.+|+.||||.+........                                .+
T Consensus        50 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           50 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             CCEEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             CcccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            3455689999999999999999999999999999999865431110                                15


Q ss_pred             EEEeccCCCChHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           93 LKREHCDGGTLVDRIS----DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~----~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      +||||+.+ +|.+.+.    ....+++..+..++.||+.||.|||++||+||||||+|||+.  ...+.+||+|||+++.
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~--~~~~~~kl~DFG~a~~  206 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQ  206 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEE--TTTTEEEECCCTTCEE
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEe--CCCCeEEeccchhhhh
Confidence            89999987 6666554    356899999999999999999999999999999999999995  2346789999999998


Q ss_pred             ccCCceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcc--------------
Q 048594          169 FEEGKVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSR--------------  233 (483)
Q Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~--------------  233 (483)
                      +.........+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..+...              
T Consensus       207 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~  286 (420)
T 1j1b_A          207 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP  286 (420)
T ss_dssp             CCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCS
T ss_pred             cccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence            7655555567899999999998764 6899999999999999999999999998877766665431              


Q ss_pred             ---ccCCCC---CC-----CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          234 ---EIDFKS---DP-----WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       234 ---~~~~~~---~~-----~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                         ...++.   .+     .+.+++++.+||.+||..||.+|||+.|+|+||||..
T Consensus       287 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~  342 (420)
T 1j1b_A          287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE  342 (420)
T ss_dssp             CCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             hhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcc
Confidence               011111   01     1356899999999999999999999999999999974

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.7e-41  Score=341.47  Aligned_cols=227  Identities=26%  Similarity=0.407  Sum_probs=180.0

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------   88 (483)
                      -.+.++|.+++.||+|+||.||+|.++.+|+.||||++......                                    
T Consensus        21 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  100 (371)
T 2xrw_A           21 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE  100 (371)
T ss_dssp             EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTT
T ss_pred             cchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccc
Confidence            35678999999999999999999999999999999998653210                                    


Q ss_pred             --CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           89 --DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        89 --~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                        ...|+|||||.| +|.+.+.  ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++
T Consensus       101 ~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~a  174 (371)
T 2xrw_A          101 EFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA  174 (371)
T ss_dssp             TCCEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCCCC-
T ss_pred             cccceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEEEeecc
Confidence              022999999986 7888886  358999999999999999999999999999999999999   67789999999999


Q ss_pred             eeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC--------
Q 048594          167 FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK--------  238 (483)
Q Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--------  238 (483)
                      ............+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+........        
T Consensus       175 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  254 (371)
T 2xrw_A          175 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ  254 (371)
T ss_dssp             ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred             cccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence            876654444567899999999999988899999999999999999999999999888777777654321100        


Q ss_pred             ---------CCC--------------CC-------CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          239 ---------SDP--------------WP-------TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       239 ---------~~~--------------~~-------~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                               .+.              ++       ..++++++||.+||+.||.+|||++|+|+||||+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~  323 (371)
T 2xrw_A          255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN  323 (371)
T ss_dssp             HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred             hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchh
Confidence                     000              00       0156799999999999999999999999999997

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.6e-41  Score=324.97  Aligned_cols=223  Identities=30%  Similarity=0.552  Sum_probs=167.7

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv   94 (483)
                      .++|.+.+.||+|+||.||+|.+..+|+.||+|++.....                                 ....|+|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            4579999999999999999999999999999999864321                                 0111899


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-  172 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-  172 (483)
                      +|||++++|.+++... .++++..+..++.||+.||.|||++|++|+||||+||++   +.++.++|+|||.+...... 
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~~~~~~  166 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPH  166 (278)
T ss_dssp             EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE---CTTCCEEECCCTTCEECC---
T ss_pred             EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEEeecceeeccCCC
Confidence            9999999999999875 679999999999999999999999999999999999999   67789999999999876432 


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      .......||+.|+|||.+.+..++.++|+||+|+++|+|++|..||...........+......    ....++.++.++
T Consensus       167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l  242 (278)
T 3cok_A          167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE----MPSFLSIEAKDL  242 (278)
T ss_dssp             -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCC----CCTTSCHHHHHH
T ss_pred             CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccC----CccccCHHHHHH
Confidence            2223457899999999998888899999999999999999999999876655554444333222    224578999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      |.+||..||.+|||+.++++||||.
T Consensus       243 i~~~l~~dp~~Rps~~~~l~h~~~~  267 (278)
T 3cok_A          243 IHQLLRRNPADRLSLSSVLDHPFMS  267 (278)
T ss_dssp             HHHHSCSSGGGSCCHHHHTTSTTTC
T ss_pred             HHHHcccCHhhCCCHHHHhcCcccc
Confidence            9999999999999999999999998

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8.7e-41  Score=337.75  Aligned_cols=229  Identities=24%  Similarity=0.355  Sum_probs=189.8

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------------   88 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------------   88 (483)
                      ...++|.+.+.||+|+||+||+|.+..+|+.||||++......                                     
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~   83 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP   83 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence            3457899999999999999999999999999999998654210                                     


Q ss_pred             ---------------------------CcCeEEEeccCCCChHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 048594           89 ---------------------------DEGYLKREHCDGGTLVDRIS----DRERYTERAAASVFRSVVNALHACHSNGI  137 (483)
Q Consensus        89 ---------------------------~~~~lv~E~~~g~~L~~~l~----~~~~l~~~~~~~i~~qil~~l~~LH~~~i  137 (483)
                                                 ...|+|||||+| +|.+.+.    ....+++..+..++.||+.||.|||++||
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  162 (383)
T 3eb0_A           84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGI  162 (383)
T ss_dssp             --------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             cccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence                                       003699999986 7666654    45789999999999999999999999999


Q ss_pred             eeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCC
Q 048594          138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQ  216 (483)
Q Consensus       138 vH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~  216 (483)
                      +||||||+||+++  ...+.+||+|||.+..+..........||+.|+|||++.+. .++.++||||+||++|+|++|.+
T Consensus       163 ~H~Dikp~Nil~~--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  240 (383)
T 3eb0_A          163 CHRDIKPQNLLVN--SKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP  240 (383)
T ss_dssp             ECSCCCGGGEEEE--TTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCccCHHHEEEc--CCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence            9999999999994  24678999999999987666666667899999999988764 48999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHccc-----------------cCCCC---C-----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHH
Q 048594          217 PFWAESLYGTLTAIMSRE-----------------IDFKS---D-----PWPTISSSAKDLIRRMLIRDPNNQITVAQIL  271 (483)
Q Consensus       217 pf~~~~~~~~~~~i~~~~-----------------~~~~~---~-----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L  271 (483)
                      ||.+....+.+..+....                 ..++.   .     ....+++++.+||.+||+.||.+|||+.|+|
T Consensus       241 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  320 (383)
T 3eb0_A          241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM  320 (383)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            999988877777665311                 11111   0     1134789999999999999999999999999


Q ss_pred             cCCcCC
Q 048594          272 KHPWLN  277 (483)
Q Consensus       272 ~h~~~~  277 (483)
                      +||||+
T Consensus       321 ~hp~f~  326 (383)
T 3eb0_A          321 AHPFFD  326 (383)
T ss_dssp             TSGGGH
T ss_pred             cCHHHH
Confidence            999997

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3e-41  Score=337.61  Aligned_cols=223  Identities=32%  Similarity=0.504  Sum_probs=185.9

Q ss_pred             cceEEeeeecccCceeEEEEEEC---CCCCEEEEEEeccCCC-----------------------------------CCc
Q 048594           49 LHFTIAEELCRGESGRIYLCTEN---STGLQFACKSISKTSK-----------------------------------SDE   90 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~-----------------------------------~~~   90 (483)
                      ++|.+.+.||+|+||.||+|.+.   .+|+.||||++.+...                                   ...
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            78999999999999999999984   5899999999865321                                   001


Q ss_pred             CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           91 GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      .|+|||||.|++|.+++....++++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++....
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~  210 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFV  210 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEECC
T ss_pred             EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCcEEEeeCCCCeecc
Confidence            18999999999999999988899999999999999999999999999999999999999   677899999999998654


Q ss_pred             CCc--eecccccCCcccCccccCCC--CCCCcCchHHHHHHHHHHhhCCCCCCCCCh----HHHHHHHHccccCCCCCCC
Q 048594          171 EGK--VYEEVVGTPLYMAPELLGPC--KYGKEIDIWSAGLILYNLLSGAQPFWAESL----YGTLTAIMSREIDFKSDPW  242 (483)
Q Consensus       171 ~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~~ll~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~  242 (483)
                      ...  .....+||+.|+|||++.+.  .++.++|||||||++|+|++|..||.....    ......+......    ..
T Consensus       211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~----~~  286 (355)
T 1vzo_A          211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP----YP  286 (355)
T ss_dssp             GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC----CC
T ss_pred             cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCC----CC
Confidence            322  22345799999999999753  468899999999999999999999975432    3333444333322    23


Q ss_pred             CCCCHHHHHHHHHhCccCCCCCC-----CHHHHHcCCcCCC
Q 048594          243 PTISSSAKDLIRRMLIRDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       243 ~~~~~~~~~li~~~L~~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      +.++..+.+||.+||..||.+||     |++++++||||..
T Consensus       287 ~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~  327 (355)
T 1vzo_A          287 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  327 (355)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence            57899999999999999999999     9999999999983

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1.4e-40  Score=328.97  Aligned_cols=226  Identities=26%  Similarity=0.471  Sum_probs=185.4

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------CCcCeEEEe
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------SDEGYLKRE   96 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------~~~~~lv~E   96 (483)
                      ..++|++.+.||+|+||+||+|.+..+++.||+|++.....                              ....++|||
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e  113 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  113 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence            35789999999999999999999999999999999875321                              111289999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE  176 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~  176 (483)
                      ||.+++|.+++.   .+++..+..++.||+.||.|||++||+||||||+|||+.  .....+||+|||++..........
T Consensus       114 ~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~--~~~~~~kl~Dfg~a~~~~~~~~~~  188 (330)
T 3nsz_A          114 HVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN  188 (330)
T ss_dssp             CCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECCCTTCEECCTTCCCC
T ss_pred             ccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEc--CCCCEEEEEeCCCceEcCCCCccc
Confidence            999999999885   489999999999999999999999999999999999994  233489999999998876666566


Q ss_pred             ccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCC-ChHHHHHHHHc-------------cccCC----
Q 048594          177 EVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAE-SLYGTLTAIMS-------------REIDF----  237 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~-~~~~~~~~i~~-------------~~~~~----  237 (483)
                      ...|++.|+|||++.+ ..++.++|||||||++|+|++|..||... .....+..+..             .....    
T Consensus       189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (330)
T 3nsz_A          189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF  268 (330)
T ss_dssp             SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHH
T ss_pred             cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccch
Confidence            6789999999999876 56899999999999999999999999543 33222222211             11111    


Q ss_pred             ----------------CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          238 ----------------KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       238 ----------------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                      .......+++++.+||.+||++||.+|||++|+|+||||+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~  324 (330)
T 3nsz_A          269 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY  324 (330)
T ss_dssp             HHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGT
T ss_pred             hhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHh
Confidence                            0111123789999999999999999999999999999998

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.3e-40  Score=323.81  Aligned_cols=225  Identities=29%  Similarity=0.438  Sum_probs=198.5

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~   92 (483)
                      ...++|.+.+.||+|+||.||+|.++.+++.+|+|++.......                                 ..|
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF   91 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence            45578999999999999999999999999999999987643111                                 118


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|||||.|++|.+++.....+++..+..++.||+.||.|||++|++||||||+||++   +.++.+||+|||.+......
T Consensus        92 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~  168 (294)
T 2rku_A           92 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYD  168 (294)
T ss_dssp             EEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCST
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEE---cCCCCEEEEeccCceecccC
Confidence            999999999999999888899999999999999999999999999999999999999   67788999999999876532


Q ss_pred             -ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          173 -KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       173 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                       .......||+.|+|||.+.+..++.++|+||+|+++|+|++|..||...........+.......+    ..+++.+.+
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  244 (294)
T 2rku_A          169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAAS  244 (294)
T ss_dssp             TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHH
T ss_pred             ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCc----cccCHHHHH
Confidence             233446789999999999888889999999999999999999999999888777777776655433    367899999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +|.+||+.||.+|||+.++++||||.
T Consensus       245 li~~~l~~~p~~Rps~~~ll~~~~~~  270 (294)
T 2rku_A          245 LIQKMLQTDPTARPTINELLNDEFFT  270 (294)
T ss_dssp             HHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             HHHHHcccChhhCcCHHHHhhChhee
Confidence            99999999999999999999999997

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-40  Score=332.26  Aligned_cols=230  Identities=28%  Similarity=0.370  Sum_probs=186.5

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------------Cc
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------------DE   90 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------------~~   90 (483)
                      ...++|.+.+.||+|+||.||+|.++.+|+.||||++......                                   ..
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            3456899999999999999999999999999999999753211                                   11


Q ss_pred             CeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           91 GYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      .|+|||||.+ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++...
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~~~  162 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSF  162 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTT
T ss_pred             eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEE---cCCCCEEEEecccceec
Confidence            1999999987 888888765 468999999999999999999999999999999999999   67789999999999876


Q ss_pred             cCC-ceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCC------
Q 048594          170 EEG-KVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP------  241 (483)
Q Consensus       170 ~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~------  241 (483)
                      ... ......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+......+..+...........      
T Consensus       163 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  242 (346)
T 1ua2_A          163 GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS  242 (346)
T ss_dssp             TSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTS
T ss_pred             cCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhcc
Confidence            432 233456789999999998654 478899999999999999999999999888887777765322111111      


Q ss_pred             ------------------CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          242 ------------------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       242 ------------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                                        ++.++.++.+||.+||..||.+|||+.|+|+||||...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~  298 (346)
T 1ua2_A          243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  298 (346)
T ss_dssp             STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             CcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcC
Confidence                              14567899999999999999999999999999999843

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.1e-40  Score=322.51  Aligned_cols=223  Identities=21%  Similarity=0.320  Sum_probs=184.9

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~   92 (483)
                      .+.++|.+.+.||+|+||+||+|.++.+++.||+|++.......                                 ..|
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~   87 (289)
T 1x8b_A            8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML   87 (289)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred             cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence            46678999999999999999999999999999999997643111                                 118


Q ss_pred             EEEeccCCCChHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC---------------
Q 048594           93 LKREHCDGGTLVDRISDR----ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD---------------  153 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~----~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~---------------  153 (483)
                      +|||||+|++|.+++...    ..+++..+..++.||+.||.|||++||+||||||+||++..++               
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~  167 (289)
T 1x8b_A           88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA  167 (289)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC------------------
T ss_pred             EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence            999999999999999764    6799999999999999999999999999999999999996432               


Q ss_pred             -CCCcEEEeecccceeccCCceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHH
Q 048594          154 -ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIM  231 (483)
Q Consensus       154 -~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~  231 (483)
                       ....++|+|||.+.......   ...||+.|+|||++.+. .++.++|||||||++|+|++|.+|+....   ....+.
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~  241 (289)
T 1x8b_A          168 SNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEIR  241 (289)
T ss_dssp             --CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHHH
T ss_pred             CCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHHH
Confidence             45589999999998765432   34689999999999765 45679999999999999999998875443   334444


Q ss_pred             ccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .....   ...+.+++++.++|.+||..||.+|||+.++++||||.
T Consensus       242 ~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~  284 (289)
T 1x8b_A          242 QGRLP---RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL  284 (289)
T ss_dssp             TTCCC---CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC-
T ss_pred             cCCCC---CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhh
Confidence            44332   12246899999999999999999999999999999998

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=4.4e-41  Score=326.08  Aligned_cols=225  Identities=23%  Similarity=0.357  Sum_probs=175.4

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------------------CCcCeEE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------------------SDEGYLK   94 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------------------~~~~~lv   94 (483)
                      ..++|++.+.||+|+||+||+|.+..+|+.||+|++.....                                ....|+|
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            45789999999999999999999999999999999875421                                1112999


Q ss_pred             EeccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           95 REHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      ||||+| +|.+++..    ..++++..+..++.||+.||.|||++ |++||||||+||++   +..+.+||+|||.+...
T Consensus        85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEE---CTTCCEEBCCC------
T ss_pred             Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecCCcccc
Confidence            999986 88777653    56899999999999999999999998 99999999999999   66789999999999877


Q ss_pred             cCCceecccccCCcccCcccc----CCCCCCCcCchHHHHHHHHHHhhCCCCCCC-CChHHHHHHHHccccCCCCCCCCC
Q 048594          170 EEGKVYEEVVGTPLYMAPELL----GPCKYGKEIDIWSAGLILYNLLSGAQPFWA-ESLYGTLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       170 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DiwslGvil~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~  244 (483)
                      ..........||+.|+|||++    .+..++.++||||+|+++|+|++|..||.. ................  ..+...
T Consensus       161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~  238 (290)
T 3fme_A          161 VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP--QLPADK  238 (290)
T ss_dssp             ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCC--CCCTTT
T ss_pred             cccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCC--Cccccc
Confidence            655555556899999999996    455688899999999999999999999976 3344444444433221  222356


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +++++.++|.+||+.||.+|||+.++++||||+
T Consensus       239 ~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~  271 (290)
T 3fme_A          239 FSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT  271 (290)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             CCHHHHHHHHHHhhcChhhCcCHHHHHhCcccc
Confidence            899999999999999999999999999999997

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.1e-40  Score=330.19  Aligned_cols=232  Identities=25%  Similarity=0.382  Sum_probs=190.2

Q ss_pred             cccccccceEEeeeecccCceeEEEEEE-CCCCCEEEEEEeccCCC----------------------------------
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTE-NSTGLQFACKSISKTSK----------------------------------   87 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~~avK~~~~~~~----------------------------------   87 (483)
                      ..+.+.++|.+.+.||+|+||+||+|.+ +.+|+.||+|++.....                                  
T Consensus         8 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~   87 (339)
T 1z57_A            8 SGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE   87 (339)
T ss_dssp             TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred             cCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence            4456788999999999999999999998 56889999999865320                                  


Q ss_pred             -CCcCeEEEeccCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCC----------
Q 048594           88 -SDEGYLKREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE----------  154 (483)
Q Consensus        88 -~~~~~lv~E~~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~----------  154 (483)
                       ....|+||||| +++|.+++...+  ++++..+..++.||+.||.|||++||+||||||+||++...+.          
T Consensus        88 ~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~  166 (339)
T 1z57_A           88 HHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKR  166 (339)
T ss_dssp             ETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred             cCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccc
Confidence             11129999999 789999998765  6899999999999999999999999999999999999953221          


Q ss_pred             ------CCcEEEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHH
Q 048594          155 ------NATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLT  228 (483)
Q Consensus       155 ------~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~  228 (483)
                            ++.+||+|||.+......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+......
T Consensus       167 ~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  244 (339)
T 1z57_A          167 DERTLINPDIKVVDFGSATYDDEH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA  244 (339)
T ss_dssp             EEEEESCCCEEECCCSSCEETTSC--CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHH
T ss_pred             ccccccCCCceEeeCcccccCccc--cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence                  567999999999875432  345678999999999998889999999999999999999999999887766555


Q ss_pred             HHHccccCCCC----------------------------------------CCCCCCCHHHHHHHHHhCccCCCCCCCHH
Q 048594          229 AIMSREIDFKS----------------------------------------DPWPTISSSAKDLIRRMLIRDPNNQITVA  268 (483)
Q Consensus       229 ~i~~~~~~~~~----------------------------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~  268 (483)
                      .+.......+.                                        ......++++.+||.+||..||.+|||+.
T Consensus       245 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~  324 (339)
T 1z57_A          245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLR  324 (339)
T ss_dssp             HHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHH
Confidence            44322111110                                        00112356789999999999999999999


Q ss_pred             HHHcCCcCC
Q 048594          269 QILKHPWLN  277 (483)
Q Consensus       269 e~L~h~~~~  277 (483)
                      |+|+||||+
T Consensus       325 ell~hp~f~  333 (339)
T 1z57_A          325 EALKHPFFD  333 (339)
T ss_dssp             HHTTSGGGG
T ss_pred             HHhcCHHHH
Confidence            999999998

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=3.2e-40  Score=322.50  Aligned_cols=226  Identities=27%  Similarity=0.417  Sum_probs=195.7

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------CeE
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------GYL   93 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~~l   93 (483)
                      ....++|.+++.||+|+||.||+|.++.+++.||+|++........                               .|+
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   97 (303)
T 3a7i_A           18 ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWI   97 (303)
T ss_dssp             ECGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence            3556789999999999999999999999999999999976542211                               189


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ||||++|++|.+++.. +++++..+..++.||+.||.|||++|++|+||+|+||++   +.++.++|+|||.+.......
T Consensus        98 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~~~  173 (303)
T 3a7i_A           98 IMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQ  173 (303)
T ss_dssp             EEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECBTTB
T ss_pred             EEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEE---CCCCCEEEeecccceecCccc
Confidence            9999999999999865 579999999999999999999999999999999999999   677899999999998765433


Q ss_pred             -eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          174 -VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       174 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                       ......|++.|+|||++.+..++.++||||||+++|+|++|..||...........+......   .....++..+.+|
T Consensus       174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l  250 (303)
T 3a7i_A          174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP---TLEGNYSKPLKEF  250 (303)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC---CCCSSCCHHHHHH
T ss_pred             cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCC---CCccccCHHHHHH
Confidence             223457899999999999888999999999999999999999999888777766666544322   2234688999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      |.+||..||.+|||+.++++||||.
T Consensus       251 i~~~l~~dp~~Rps~~~ll~~~~~~  275 (303)
T 3a7i_A          251 VEACLNKEPSFRPTAKELLKHKFIL  275 (303)
T ss_dssp             HHHHCCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHHHcCCChhhCcCHHHHhhChhhh
Confidence            9999999999999999999999997

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=1.1e-40  Score=332.53  Aligned_cols=232  Identities=27%  Similarity=0.385  Sum_probs=188.6

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCC-CEEEEEEeccCCC----------------------------------
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTG-LQFACKSISKTSK----------------------------------   87 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~~avK~~~~~~~----------------------------------   87 (483)
                      ..+.+.++|.+.+.||+|+||+||+|.++.++ ..||+|++.....                                  
T Consensus        13 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~   92 (355)
T 2eu9_A           13 IGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN   92 (355)
T ss_dssp             TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred             cCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence            34567889999999999999999999998887 6899999875320                                  


Q ss_pred             -CCcCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC------------
Q 048594           88 -SDEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD------------  152 (483)
Q Consensus        88 -~~~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~------------  152 (483)
                       ....|+||||| +++|.+++...  .++++..+..++.||+.||.|||++||+||||||+|||+...            
T Consensus        93 ~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~  171 (355)
T 2eu9_A           93 FHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSC  171 (355)
T ss_dssp             ETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred             eCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccc
Confidence             01118999999 55788887765  379999999999999999999999999999999999999532            


Q ss_pred             ----CCCCcEEEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHH
Q 048594          153 ----DENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLT  228 (483)
Q Consensus       153 ----~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~  228 (483)
                          +..+.+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+........
T Consensus       172 ~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  249 (355)
T 2eu9_A          172 EEKSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV  249 (355)
T ss_dssp             CEEEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             cccccCCCcEEEeecCcccccccc--ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                24678999999999875433  245689999999999998899999999999999999999999999887766555


Q ss_pred             HHHccccCCCC----------------------------------------CCCCCCCHHHHHHHHHhCccCCCCCCCHH
Q 048594          229 AIMSREIDFKS----------------------------------------DPWPTISSSAKDLIRRMLIRDPNNQITVA  268 (483)
Q Consensus       229 ~i~~~~~~~~~----------------------------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~  268 (483)
                      .+.......+.                                        ......+.++.+||.+||..||.+|||+.
T Consensus       250 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~  329 (355)
T 2eu9_A          250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLA  329 (355)
T ss_dssp             HHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHH
Confidence            44332111110                                        00112245789999999999999999999


Q ss_pred             HHHcCCcCC
Q 048594          269 QILKHPWLN  277 (483)
Q Consensus       269 e~L~h~~~~  277 (483)
                      |+|+||||+
T Consensus       330 e~l~hp~f~  338 (355)
T 2eu9_A          330 EALLHPFFA  338 (355)
T ss_dssp             HHTTSGGGG
T ss_pred             HHhcChhhc
Confidence            999999998

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=4.2e-40  Score=324.76  Aligned_cols=229  Identities=24%  Similarity=0.372  Sum_probs=193.1

Q ss_pred             ccccceEEeeeecccCceeEEEEEEC-CCCCEEEEEEeccCCCCC-----------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTEN-STGLQFACKSISKTSKSD-----------------------------------   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~-----------------------------------   89 (483)
                      .+.++|.+.+.||+|+||.||+|.+. .+|+.||+|++.......                                   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            45678999999999999999999995 678999999986432111                                   


Q ss_pred             -----cCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEee
Q 048594           90 -----EGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD  162 (483)
Q Consensus        90 -----~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~D  162 (483)
                           ..|+|+||+.| +|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|
T Consensus        88 ~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili---~~~~~~kl~D  163 (326)
T 1blx_A           88 TDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLAD  163 (326)
T ss_dssp             CSSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECS
T ss_pred             cCCCceEEEEEecCCC-CHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEE---cCCCCEEEec
Confidence                 01899999985 999999865  349999999999999999999999999999999999999   6778999999


Q ss_pred             cccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-----C
Q 048594          163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-----F  237 (483)
Q Consensus       163 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----~  237 (483)
                      ||.+.............||+.|+|||++.+..++.++||||||+++|+|++|..||.+......+..+......     +
T Consensus       164 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  243 (326)
T 1blx_A          164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW  243 (326)
T ss_dssp             CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred             CcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccC
Confidence            99998765444445567899999999999888999999999999999999999999998887777666532110     0


Q ss_pred             C------------------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          238 K------------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       238 ~------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      +                  ...++.++..+++||.+||..||.+|||+.++|+||||+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  302 (326)
T 1blx_A          244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD  302 (326)
T ss_dssp             CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccc
Confidence            0                  0112468899999999999999999999999999999983

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.5e-40  Score=323.82  Aligned_cols=230  Identities=27%  Similarity=0.401  Sum_probs=189.5

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cC
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EG   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~   91 (483)
                      ..+.++|.+++.||+|+||.||+|.+..++..||+|++.......                                 ..
T Consensus         7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~   86 (294)
T 4eqm_A            7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCY   86 (294)
T ss_dssp             SCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEE
T ss_pred             hHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeE
Confidence            456789999999999999999999999999999999986543211                                 11


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+|||||+|++|.+++...+++++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.....
T Consensus        87 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~  163 (294)
T 4eqm_A           87 YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSE  163 (294)
T ss_dssp             EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCSSSTTC--
T ss_pred             EEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEEeCCCcccccc
Confidence            8999999999999999988899999999999999999999999999999999999999   6778999999999986643


Q ss_pred             Cc--eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-CCCCCCCCCCHH
Q 048594          172 GK--VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-FKSDPWPTISSS  248 (483)
Q Consensus       172 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~  248 (483)
                      ..  ......||+.|+|||.+.+..++.++||||+|+++|+|++|..||.+................ .+....+.+|+.
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (294)
T 4eqm_A          164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQS  243 (294)
T ss_dssp             -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHH
T ss_pred             ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHH
Confidence            32  223457999999999999888999999999999999999999999988876665554443322 222234578999


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +.++|.+||.+||.+||+..+.+.+.|..
T Consensus       244 l~~li~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          244 LSNVILRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             HHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence            99999999999999999766667777655

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=3.1e-40  Score=320.55  Aligned_cols=226  Identities=20%  Similarity=0.326  Sum_probs=188.9

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------C
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------D   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------~   89 (483)
                      .-...|.+.+.||+|+||+||+|.+..++..||+|.+......                                    .
T Consensus        23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~  102 (290)
T 1t4h_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK  102 (290)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred             cCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCc
Confidence            3455799999999999999999999999999999998654211                                    0


Q ss_pred             cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           90 EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                      ..|+|||||++++|.+++.....+++..+..++.||+.||.|||+++  |+|+||||+||++.  +..+.+||+|||++.
T Consensus       103 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~--~~~~~~kl~Dfg~~~  180 (290)
T 1t4h_A          103 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLAT  180 (290)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGGG
T ss_pred             eEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE--CCCCCEEEeeCCCcc
Confidence            12899999999999999998888999999999999999999999999  99999999999994  256789999999997


Q ss_pred             eccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHH-HHHHHHccccCCCCCCCCCCC
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG-TLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ..... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||....... ....+......  .......+
T Consensus       181 ~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~  256 (290)
T 1t4h_A          181 LKRAS-FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAI  256 (290)
T ss_dssp             GCCTT-SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCC
T ss_pred             ccccc-ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc--cccCCCCC
Confidence            55433 2345679999999999875 68999999999999999999999998754443 44444333221  11123567


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +++.++|.+||..||.+|||+.++|+||||+
T Consensus       257 ~~l~~li~~~l~~dp~~Rps~~ell~h~~f~  287 (290)
T 1t4h_A          257 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  287 (290)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhhCcccc
Confidence            8999999999999999999999999999997

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=8.7e-41  Score=335.41  Aligned_cols=229  Identities=28%  Similarity=0.428  Sum_probs=190.8

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------   88 (483)
                      -++..+|.+++.||+|+||.||+|.++.++..||||++......                                    
T Consensus        23 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  102 (364)
T 3qyz_A           23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM  102 (364)
T ss_dssp             CCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred             ccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcccc
Confidence            35667999999999999999999999999999999998643210                                    


Q ss_pred             CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           89 DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        89 ~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      ...|+|+||+.| +|.+++... ++++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||.+..
T Consensus       103 ~~~~iv~e~~~~-~L~~~l~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~  177 (364)
T 3qyz_A          103 KDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARV  177 (364)
T ss_dssp             CCEEEEEECCSE-EHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEE
T ss_pred             ceEEEEEcccCc-CHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE---CCCCCEEEEeCcceEe
Confidence            122899999986 899998764 79999999999999999999999999999999999999   6778899999999987


Q ss_pred             ccCCce----ecccccCCcccCccccC-CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCC------
Q 048594          169 FEEGKV----YEEVVGTPLYMAPELLG-PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDF------  237 (483)
Q Consensus       169 ~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~------  237 (483)
                      ......    ....+||+.|+|||++. +..++.++|||||||++|+|++|.+||.+......+..+.......      
T Consensus       178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  257 (364)
T 3qyz_A          178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN  257 (364)
T ss_dssp             CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHH
T ss_pred             cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence            653321    23457999999999864 4458999999999999999999999999888777766664321110      


Q ss_pred             --------------CC---C----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          238 --------------KS---D----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       238 --------------~~---~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                    +.   .    .++.+++++.+||.+||++||.+|||+.|+|+||||+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  319 (364)
T 3qyz_A          258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ  319 (364)
T ss_dssp             TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhh
Confidence                          00   0    12467899999999999999999999999999999983

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.6e-40  Score=329.63  Aligned_cols=225  Identities=29%  Similarity=0.438  Sum_probs=198.6

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~   92 (483)
                      ....+|.+.+.||+|+||.||+|.+..+++.+|+|++.......                                 ..|
T Consensus        38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  117 (335)
T 2owb_A           38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF  117 (335)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence            45678999999999999999999999999999999987643111                                 118


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|||||.|++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++......
T Consensus       118 lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~  194 (335)
T 2owb_A          118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYD  194 (335)
T ss_dssp             EEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCST
T ss_pred             EEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEE---cCCCCEEEeeccCceecccC
Confidence            999999999999999888899999999999999999999999999999999999999   66788999999999876532


Q ss_pred             -ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          173 -KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       173 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                       .......||+.|+|||++.+..++.++||||||+++|+|++|..||...........+......++    ..+++.+.+
T Consensus       195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  270 (335)
T 2owb_A          195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAAS  270 (335)
T ss_dssp             TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCHHHHH
T ss_pred             cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCC----ccCCHHHHH
Confidence             233456799999999999888889999999999999999999999998888777777776655443    367899999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||.+||+.||.+|||+.++|+||||.
T Consensus       271 li~~~l~~dp~~Rps~~ell~~~~~~  296 (335)
T 2owb_A          271 LIQKMLQTDPTARPTINELLNDEFFT  296 (335)
T ss_dssp             HHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             HHHHHccCChhHCcCHHHHhcCcccc
Confidence            99999999999999999999999997

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=6.1e-41  Score=331.15  Aligned_cols=224  Identities=24%  Similarity=0.400  Sum_probs=180.9

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------------   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------------   89 (483)
                      .+.++|.+.+.||+|+||.||+|+++.+|+.||||++.......                                    
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   82 (332)
T 3qd2_B            3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ   82 (332)
T ss_dssp             HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred             hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence            45678999999999999999999999999999999986432110                                    


Q ss_pred             ----------------------------------------------------cCeEEEeccCCCChHHHHhcCCC---CC
Q 048594           90 ----------------------------------------------------EGYLKREHCDGGTLVDRISDRER---YT  114 (483)
Q Consensus        90 ----------------------------------------------------~~~lv~E~~~g~~L~~~l~~~~~---l~  114 (483)
                                                                          ..|+|||||+|++|.+++.....   .+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  162 (332)
T 3qd2_B           83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE  162 (332)
T ss_dssp             HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred             hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence                                                                03799999999999999987643   56


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-------------eecccccC
Q 048594          115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-------------VYEEVVGT  181 (483)
Q Consensus       115 ~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-------------~~~~~~gt  181 (483)
                      +..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.......             .....+||
T Consensus       163 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt  239 (332)
T 3qd2_B          163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT  239 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEE---eCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence            66789999999999999999999999999999999   667899999999998765432             12335799


Q ss_pred             CcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCC
Q 048594          182 PLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP  261 (483)
Q Consensus       182 ~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  261 (483)
                      +.|+|||++.+..++.++|||||||++|+|++|..|+..  .......+.....   +..++..++++.+||.+||+.||
T Consensus       240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p  314 (332)
T 3qd2_B          240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKF---PLLFTQKYPQEHMMVQDMLSPSP  314 (332)
T ss_dssp             GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCC---CHHHHHHCHHHHHHHHHHHCSSG
T ss_pred             cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCC---CcccccCChhHHHHHHHHccCCC
Confidence            999999999988899999999999999999998877521  1122222222211   11123467889999999999999


Q ss_pred             CCCCCHHHHHcCCcCC
Q 048594          262 NNQITVAQILKHPWLN  277 (483)
Q Consensus       262 ~~R~t~~e~L~h~~~~  277 (483)
                      .+|||+.|+|+||||+
T Consensus       315 ~~Rps~~~~l~~~~f~  330 (332)
T 3qd2_B          315 TERPEATDIIENAIFE  330 (332)
T ss_dssp             GGSCCHHHHHHSTTCC
T ss_pred             CcCCCHHHHhhchhhh
Confidence            9999999999999997

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=7.5e-41  Score=331.36  Aligned_cols=229  Identities=28%  Similarity=0.436  Sum_probs=188.1

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cCeE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EGYL   93 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~~l   93 (483)
                      ...++|++++.||+|+||.||+|.++.+|+.||+|++.......                                ..|+
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  101 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL  101 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence            44568999999999999999999999999999999986543211                                1189


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-  172 (483)
                      |||||.+++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||.+...... 
T Consensus       102 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~  178 (331)
T 4aaa_A          102 VFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPG  178 (331)
T ss_dssp             EEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCTTC-------
T ss_pred             EEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEE---cCCCcEEEEeCCCceeecCCc
Confidence            99999999998888888889999999999999999999999999999999999999   67789999999999765432 


Q ss_pred             ceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC---------------
Q 048594          173 KVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID---------------  236 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~---------------  236 (483)
                      .......||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.........+......               
T Consensus       179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (331)
T 4aaa_A          179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF  258 (331)
T ss_dssp             -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred             cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence            233456789999999998765 6789999999999999999999999988877666555421110               


Q ss_pred             ----CCC--------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          237 ----FKS--------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       237 ----~~~--------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                          .+.        ..++.+++.+.+||.+||++||.+|||+.|+|+||||+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~  311 (331)
T 4aaa_A          259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ  311 (331)
T ss_dssp             TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhc
Confidence                000        01246789999999999999999999999999999997

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=9.2e-41  Score=328.93  Aligned_cols=231  Identities=23%  Similarity=0.378  Sum_probs=188.2

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cC
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EG   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~   91 (483)
                      ..+.++|.+.+.||+|+||+||+|.++.+|+.||||++.......                                 ..
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   84 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK   84 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceE
Confidence            345678999999999999999999999999999999987533111                                 12


Q ss_pred             eEEEeccCCCChHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee-CCCCCcEEEeecccce
Q 048594           92 YLKREHCDGGTLVDRISDRE---RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT-DDENATLKATDFGLAF  167 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~---~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~-~~~~~~ikl~Dfg~a~  167 (483)
                      |+|||||+|++|.+++....   .+++..+..++.||+.||.|||++||+||||||+||++.. ++..+.+||+|||++.
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~  164 (319)
T 4euu_A           85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (319)
T ss_dssp             EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred             EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence            89999999999999998653   3999999999999999999999999999999999999843 3455679999999999


Q ss_pred             eccCCceecccccCCcccCccccC--------CCCCCCcCchHHHHHHHHHHhhCCCCCCCCC----hHHHHHHHHcccc
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLG--------PCKYGKEIDIWSAGLILYNLLSGAQPFWAES----LYGTLTAIMSREI  235 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DiwslGvil~~ll~g~~pf~~~~----~~~~~~~i~~~~~  235 (483)
                      ............||+.|+|||++.        +..++.++|||||||++|+|++|..||....    ....+..+..+.+
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p  244 (319)
T 4euu_A          165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP  244 (319)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred             ecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence            877666556678999999999885        4578999999999999999999999996432    2344444444322


Q ss_pred             C-------------------CCC--CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCc
Q 048594          236 D-------------------FKS--DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW  275 (483)
Q Consensus       236 ~-------------------~~~--~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~  275 (483)
                      .                   ++.  .....++..+.+||.+||++||.+|||++|+|+||-
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            1                   000  011234567899999999999999999999999974

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=8.8e-40  Score=322.62  Aligned_cols=229  Identities=26%  Similarity=0.438  Sum_probs=187.9

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------------
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------------   87 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------------   87 (483)
                      .....++|.+.+.||+|+||.||+|.+..+|+.||+|++.....                                    
T Consensus        19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~   98 (326)
T 2x7f_A           19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   98 (326)
T ss_dssp             CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred             ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence            34567899999999999999999999999999999999865421                                    


Q ss_pred             CCcCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           88 SDEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        88 ~~~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                      ....|+|||||.+++|.+++...  ..+++..+..++.||+.||.|||++||+|+||||+||++   +.++.+||+|||+
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~  175 (326)
T 2x7f_A           99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGV  175 (326)
T ss_dssp             CCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTCCEEECCCTT
T ss_pred             cceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEE---cCCCCEEEeeCcC
Confidence            11228999999999999999864  579999999999999999999999999999999999999   6678899999999


Q ss_pred             ceeccCC-ceecccccCCcccCccccC-----CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC
Q 048594          166 AFFFEEG-KVYEEVVGTPLYMAPELLG-----PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS  239 (483)
Q Consensus       166 a~~~~~~-~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (483)
                      +...... .......||+.|+|||++.     +..++.++|||||||++|+|++|..||.+.........+......  .
T Consensus       176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~  253 (326)
T 2x7f_A          176 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP--R  253 (326)
T ss_dssp             TC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC--C
T ss_pred             ceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccc--c
Confidence            8876432 2233457899999999986     456889999999999999999999999888777666665544322  2


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .....++..+.+||.+||..||.+|||+.++++||||+
T Consensus       254 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~  291 (326)
T 2x7f_A          254 LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIR  291 (326)
T ss_dssp             CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHH
T ss_pred             CCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHh
Confidence            22356789999999999999999999999999999998

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.6e-40  Score=329.22  Aligned_cols=224  Identities=26%  Similarity=0.462  Sum_probs=180.2

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------------cC
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------------EG   91 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~   91 (483)
                      ...++|.+++.||+|+||.||+|.+. +++.||||++.......                                  ..
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~   84 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI   84 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEE
Confidence            34568999999999999999999985 68999999987543110                                  11


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+||| +.+++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+.    ++.+||+|||++.....
T Consensus        85 ~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~----~~~~kl~DFG~a~~~~~  159 (343)
T 3dbq_A           85 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQP  159 (343)
T ss_dssp             EEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCCC--
T ss_pred             EEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE----CCcEEEeecccccccCc
Confidence            89999 55779999999999999999999999999999999999999999999999994    46799999999987653


Q ss_pred             Cce---ecccccCCcccCccccCC-----------CCCCCcCchHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHHccccC
Q 048594          172 GKV---YEEVVGTPLYMAPELLGP-----------CKYGKEIDIWSAGLILYNLLSGAQPFWAESL-YGTLTAIMSREID  236 (483)
Q Consensus       172 ~~~---~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwslGvil~~ll~g~~pf~~~~~-~~~~~~i~~~~~~  236 (483)
                      ...   ....+||+.|+|||++.+           ..++.++|||||||++|+|++|..||..... ...+..+......
T Consensus       160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~  239 (343)
T 3dbq_A          160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE  239 (343)
T ss_dssp             ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC
T ss_pred             ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcc
Confidence            322   234679999999999853           5678899999999999999999999976433 3444444443332


Q ss_pred             CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          237 FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       237 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ..  .....+.++.+||.+||+.||.+|||+.++|+||||+
T Consensus       240 ~~--~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~  278 (343)
T 3dbq_A          240 IE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  278 (343)
T ss_dssp             CC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             cC--CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence            22  2235678999999999999999999999999999998

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=3.3e-40  Score=330.20  Aligned_cols=229  Identities=24%  Similarity=0.313  Sum_probs=179.0

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc------------------------------------
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------------------------   90 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~------------------------------------   90 (483)
                      ..++|.+.+.||+|+||+||+|.++.+|+.||||++........                                    
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  100 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY  100 (360)
T ss_dssp             HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEE
T ss_pred             hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccccee
Confidence            34689999999999999999999999999999999865431110                                    


Q ss_pred             CeEEEeccCCCChHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           91 GYLKREHCDGGTLVDRI----SDRERYTERAAASVFRSVVNALHACH--SNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l----~~~~~l~~~~~~~i~~qil~~l~~LH--~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                      .|+|||||.+ +|.+.+    .....+++..+..++.||+.||.|||  ++||+||||||+|||++  ..++.+||+|||
T Consensus       101 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~--~~~~~~kl~Dfg  177 (360)
T 3e3p_A          101 LNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN--EADGTLKLCDFG  177 (360)
T ss_dssp             EEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEE--TTTTEEEECCCT
T ss_pred             EEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEe--CCCCcEEEeeCC
Confidence            2789999987 555443    35678999999999999999999999  99999999999999994  236799999999


Q ss_pred             cceeccCCceecccccCCcccCccccCCCC-CCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC-----
Q 048594          165 LAFFFEEGKVYEEVVGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK-----  238 (483)
Q Consensus       165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-----  238 (483)
                      ++.............||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+....+..+.......+     
T Consensus       178 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  257 (360)
T 3e3p_A          178 SAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLR  257 (360)
T ss_dssp             TCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             CceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHH
Confidence            998877665556678999999999986544 79999999999999999999999999888777777654211100     


Q ss_pred             -----------------------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          239 -----------------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       239 -----------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                             .......++++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  320 (360)
T 3e3p_A          258 KLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE  320 (360)
T ss_dssp             HHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGG
T ss_pred             hcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccc
Confidence                                   0011235688999999999999999999999999999984

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=3.1e-40  Score=332.29  Aligned_cols=230  Identities=28%  Similarity=0.436  Sum_probs=188.6

Q ss_pred             cccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------
Q 048594           41 GKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------   88 (483)
Q Consensus        41 ~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------   88 (483)
                      ......+.++|.+.+.||+|+||+||+|.++.+|+.||||++......                                
T Consensus        34 ~~~~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~  113 (371)
T 4exu_A           34 NKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPA  113 (371)
T ss_dssp             TTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             ccceecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheecc
Confidence            344567889999999999999999999999999999999999753211                                


Q ss_pred             Cc------CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEee
Q 048594           89 DE------GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD  162 (483)
Q Consensus        89 ~~------~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~D  162 (483)
                      ..      .|+||||+.+ +|.+.+.  ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|
T Consensus       114 ~~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kL~D  187 (371)
T 4exu_A          114 SSLRNFYDFYLVMPFMQT-DLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILD  187 (371)
T ss_dssp             SSSTTCCCCEEEEECCCE-EHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECS
T ss_pred             CCcccceeEEEEEccccc-cHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE---CCCCCEEEEe
Confidence            11      1899999985 8888874  359999999999999999999999999999999999999   6778899999


Q ss_pred             cccceeccCCceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-----
Q 048594          163 FGLAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-----  236 (483)
Q Consensus       163 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----  236 (483)
                      ||.+......  .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+......     
T Consensus       188 fg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  265 (371)
T 4exu_A          188 FGLARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF  265 (371)
T ss_dssp             TTCC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred             cCcccccccC--cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHH
Confidence            9999865432  345678999999999876 67899999999999999999999999998877776665431110     


Q ss_pred             ------------------CCCC----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          237 ------------------FKSD----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       237 ------------------~~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                        .+..    .++.+++.+.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  329 (371)
T 4exu_A          266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP  329 (371)
T ss_dssp             HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCccccc
Confidence                              0000    12467899999999999999999999999999999983

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=6.7e-40  Score=326.85  Aligned_cols=224  Identities=25%  Similarity=0.409  Sum_probs=190.8

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cC
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EG   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~   91 (483)
                      .+..++|.+++.||+|+||+||+|.+..+|+.||||++.......                                 ..
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  129 (348)
T 1u5q_A           50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTA  129 (348)
T ss_dssp             SCHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             cchhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeE
Confidence            355678999999999999999999999999999999997543111                                 11


Q ss_pred             eEEEeccCCCChHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           92 YLKREHCDGGTLVDRIS-DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~-~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      |+|||||.| +|.+++. ...++++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus       130 ~lv~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          130 WLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             EEEEECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE---ETTTEEEECCCTTCBSSS
T ss_pred             EEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEeeccCceecC
Confidence            899999985 7888775 45689999999999999999999999999999999999999   567799999999998764


Q ss_pred             CCceecccccCCcccCccccC---CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          171 EGKVYEEVVGTPLYMAPELLG---PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       171 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      ..   ....||+.|+|||++.   ...++.++|||||||++|+|++|..||.+.+....+..+.......  .....+++
T Consensus       206 ~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  280 (348)
T 1u5q_A          206 PA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA--LQSGHWSE  280 (348)
T ss_dssp             SB---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC--CCCTTSCH
T ss_pred             CC---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--CCCCCCCH
Confidence            33   3457999999999883   4578999999999999999999999999888777766666543322  22346789


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+.+||.+||+.||.+|||++++|+||||.
T Consensus       281 ~l~~li~~~l~~dP~~Rps~~~ll~h~~~~  310 (348)
T 1u5q_A          281 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVL  310 (348)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHHHHHHHHcccChhhCcCHHHHhhChhhh
Confidence            999999999999999999999999999997

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=8.6e-40  Score=320.95  Aligned_cols=229  Identities=25%  Similarity=0.435  Sum_probs=187.9

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------cCeEEEe
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------EGYLKRE   96 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------~~~lv~E   96 (483)
                      ....++|.+.+.||+|+||.||+|.++.+|+.||+|.+.......                            ..|+|||
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            356778999999999999999999999999999999997653211                            1199999


Q ss_pred             ccCCCChHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-e
Q 048594           97 HCDGGTLVDRIS-DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-V  174 (483)
Q Consensus        97 ~~~g~~L~~~l~-~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~  174 (483)
                      ||.+++|.+++. ....+++..+..++.||+.||.|||+.|++|+||+|+||++   +.++.++|+|||.+....... .
T Consensus       105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~~~~  181 (314)
T 3com_A          105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL---NTEGHAKLADFGVAGQLTDTMAK  181 (314)
T ss_dssp             CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECBTTBSC
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEE---CCCCCEEEeecccchhhhhhccc
Confidence            999999999997 45689999999999999999999999999999999999999   667889999999998765432 2


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .....|++.|+|||++.+..++.++||||||+++|+|++|..||...........+...... .......++..+.+||.
T Consensus       182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~  260 (314)
T 3com_A          182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPP-TFRKPELWSDNFTDFVK  260 (314)
T ss_dssp             BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC-CCSSGGGSCHHHHHHHH
T ss_pred             cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCc-ccCCcccCCHHHHHHHH
Confidence            33457899999999999888999999999999999999999999887766655555443221 11122457899999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcCC
Q 048594          255 RMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +||..||.+|||+.++|+||||+
T Consensus       261 ~~l~~dp~~Rpt~~~ll~~~~~~  283 (314)
T 3com_A          261 QCLVKSPEQRATATQLLQHPFVR  283 (314)
T ss_dssp             HHTCSCTTTSCCHHHHTTSHHHH
T ss_pred             HHccCChhhCcCHHHHHhCHHHh
Confidence            99999999999999999999998

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=9.6e-41  Score=339.96  Aligned_cols=235  Identities=27%  Similarity=0.398  Sum_probs=173.9

Q ss_pred             cccccccceEE-eeeecccCceeEEEEEEC--CCCCEEEEEEeccCCCC------------------------------C
Q 048594           43 AYEDIKLHFTI-AEELCRGESGRIYLCTEN--STGLQFACKSISKTSKS------------------------------D   89 (483)
Q Consensus        43 ~~~~i~~~y~~-~~~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~------------------------------~   89 (483)
                      ..+.+.+.|.+ .++||+|+||+||+|.++  .+++.||||++......                              .
T Consensus        14 ~~~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   93 (405)
T 3rgf_A           14 ERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADR   93 (405)
T ss_dssp             HCCCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred             hhhhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence            34577788988 558999999999999976  57899999998764311                              1


Q ss_pred             cCeEEEeccCCCChHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC-CCCCcEE
Q 048594           90 EGYLKREHCDGGTLVDRISDR---------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD-DENATLK  159 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~---------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~-~~~~~ik  159 (483)
                      ..|+|||||.| +|.+++...         ..+++..++.++.||+.||.|||++||+||||||+|||+... +..+.+|
T Consensus        94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~k  172 (405)
T 3rgf_A           94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVK  172 (405)
T ss_dssp             EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred             eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEE
Confidence            12899999976 888887532         259999999999999999999999999999999999999643 4567999


Q ss_pred             EeecccceeccCC----ceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCCh---------HH
Q 048594          160 ATDFGLAFFFEEG----KVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESL---------YG  225 (483)
Q Consensus       160 l~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~---------~~  225 (483)
                      |+|||++......    ......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+...         ..
T Consensus       173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~  252 (405)
T 3rgf_A          173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD  252 (405)
T ss_dssp             ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHH
T ss_pred             EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHH
Confidence            9999999876432    223456889999999998774 489999999999999999999999976543         23


Q ss_pred             HHHHHHccccCCCCCCCC----------------------------------CCCHHHHHHHHHhCccCCCCCCCHHHHH
Q 048594          226 TLTAIMSREIDFKSDPWP----------------------------------TISSSAKDLIRRMLIRDPNNQITVAQIL  271 (483)
Q Consensus       226 ~~~~i~~~~~~~~~~~~~----------------------------------~~~~~~~~li~~~L~~dP~~R~t~~e~L  271 (483)
                      .+..+...........|+                                  ..++.+.+||.+||.+||.+|||++|+|
T Consensus       253 ~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L  332 (405)
T 3rgf_A          253 QLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM  332 (405)
T ss_dssp             HHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             HHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence            444443322111111111                                  1267899999999999999999999999


Q ss_pred             cCCcCCC
Q 048594          272 KHPWLNY  278 (483)
Q Consensus       272 ~h~~~~~  278 (483)
                      +||||..
T Consensus       333 ~hp~f~~  339 (405)
T 3rgf_A          333 QDPYFLE  339 (405)
T ss_dssp             TSGGGTS
T ss_pred             cChhhcc
Confidence            9999984

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.4e-39  Score=317.53  Aligned_cols=229  Identities=27%  Similarity=0.417  Sum_probs=189.5

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------cCeEE
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------EGYLK   94 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------~~~lv   94 (483)
                      .++.++|++++.||+|+||.||+|.++.+|+.+|+|++.......                              ..|+|
T Consensus        15 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   94 (302)
T 2j7t_A           15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM   94 (302)
T ss_dssp             SCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred             cCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence            467789999999999999999999999999999999987643211                              11999


Q ss_pred             EeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-C
Q 048594           95 REHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-G  172 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~  172 (483)
                      ||||++++|.+++.. ...+++..+..++.||+.||.|||++|++||||||+||++   +.++.+||+|||++..... .
T Consensus        95 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~  171 (302)
T 2j7t_A           95 IEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM---TLEGDIRLADFGVSAKNLKTL  171 (302)
T ss_dssp             EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTSCEEECCCHHHHHHHHHH
T ss_pred             EEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---CCCCCEEEEECCCCccccccc
Confidence            999999999998875 4679999999999999999999999999999999999999   6678899999998754321 1


Q ss_pred             ceecccccCCcccCcccc-----CCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          173 KVYEEVVGTPLYMAPELL-----GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      .......||+.|+|||++     .+..++.++||||||+++|+|++|..||...+.......+........ .....++.
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  250 (302)
T 2j7t_A          172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL-LTPSKWSV  250 (302)
T ss_dssp             HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-SSGGGSCH
T ss_pred             cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCccc-CCccccCH
Confidence            122345789999999988     456788999999999999999999999998887777666665443221 12246789


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+.++|.+||..||.+|||+.++++||||.
T Consensus       251 ~l~~li~~~l~~dp~~Rps~~~ll~h~~~~  280 (302)
T 2j7t_A          251 EFRDFLKIALDKNPETRPSAAQLLEHPFVS  280 (302)
T ss_dssp             HHHHHHHHHSCSCTTTSCCHHHHTTSTTTT
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhcChHHh
Confidence            999999999999999999999999999998

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=4.4e-41  Score=338.41  Aligned_cols=224  Identities=16%  Similarity=0.186  Sum_probs=180.9

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------C-----------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------S-----------------   88 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------~-----------------   88 (483)
                      ...|.+.+.||+|+||+||+|.++.+|+.||||++.....                      .                 
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            4459999999999999999999999999999999876321                      1                 


Q ss_pred             --------------------CcCeEEEeccCCCChHHHHhcC-CCCCHHHH------HHHHHHHHHHHHHHHHCCCeeeC
Q 048594           89 --------------------DEGYLKREHCDGGTLVDRISDR-ERYTERAA------ASVFRSVVNALHACHSNGIMHRD  141 (483)
Q Consensus        89 --------------------~~~~lv~E~~~g~~L~~~l~~~-~~l~~~~~------~~i~~qil~~l~~LH~~~ivH~d  141 (483)
                                          ...|+|||||. ++|.+++... ..+++...      ..++.||+.||+|||++||+|||
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD  219 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH  219 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence                                11489999999 6999999864 33455555      67779999999999999999999


Q ss_pred             CCCCeEEEeeCCCCCcEEEeecccceeccCCceecccccCCcccCccccCC--CCCCCcCchHHHHHHHHHHhhCCCCCC
Q 048594          142 LKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP--CKYGKEIDIWSAGLILYNLLSGAQPFW  219 (483)
Q Consensus       142 lkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~~ll~g~~pf~  219 (483)
                      |||+|||+   +.++.+||+|||++......  .....+|+.|+|||++.+  ..++.++|||||||++|+|++|..||.
T Consensus       220 ikp~NIll---~~~~~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~  294 (371)
T 3q60_A          220 FTPDNLFI---MPDGRLMLGDVSALWKVGTR--GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG  294 (371)
T ss_dssp             CSGGGEEE---CTTSCEEECCGGGEEETTCE--EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred             CCHHHEEE---CCCCCEEEEecceeeecCCC--ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence            99999999   67789999999999876432  224567799999999987  678999999999999999999999997


Q ss_pred             CCChHHH--HHH---HHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          220 AESLYGT--LTA---IMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       220 ~~~~~~~--~~~---i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +......  ...   .......+..+.++.+++.+.+||.+||+.||.+|||+.++|+||||+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  357 (371)
T 3q60_A          295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL  357 (371)
T ss_dssp             BCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHH
T ss_pred             CcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHH
Confidence            7632210  000   111112222333457899999999999999999999999999999997

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2.3e-40  Score=331.68  Aligned_cols=227  Identities=27%  Similarity=0.414  Sum_probs=188.8

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeE
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYL   93 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~l   93 (483)
                      +-..++|.+.+.||+|+||+||+|.++.+|..||+|++......                               ...|+
T Consensus        29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  108 (360)
T 3eqc_A           29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI  108 (360)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence            34567999999999999999999999999999999998764211                               11189


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |||||+|++|.+++...+.+++..+..++.||+.||.|||++ ||+||||||+||++   +.++.++|+|||++......
T Consensus       109 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~  185 (360)
T 3eqc_A          109 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS  185 (360)
T ss_dssp             EECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHHHHHH
T ss_pred             EEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEE---CCCCCEEEEECCCCcccccc
Confidence            999999999999999888999999999999999999999996 99999999999999   66788999999998765322


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHH----------------------
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI----------------------  230 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i----------------------  230 (483)
                       ......||+.|+|||++.+..++.++|||||||++|+|++|..||...........+                      
T Consensus       186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (360)
T 3eqc_A          186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL  264 (360)
T ss_dssp             -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred             -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence             223457899999999999888999999999999999999999999876654432221                      


Q ss_pred             --------------------HccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          231 --------------------MSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       231 --------------------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                          .....  +..+...++.++.+||.+||++||.+|||++++|+||||+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  329 (360)
T 3eqc_A          265 NKFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK  329 (360)
T ss_dssp             ---------CCCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred             cccccCCCCcccchhhhhHHhccCC--CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence                                11111  1112234789999999999999999999999999999998

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=4.7e-41  Score=339.01  Aligned_cols=217  Identities=17%  Similarity=0.199  Sum_probs=178.3

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------------   88 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------------   88 (483)
                      ...++|.+.+.||+|+||+||+|.++.+|+.||||++......                                     
T Consensus        70 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~  149 (377)
T 3byv_A           70 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF  149 (377)
T ss_dssp             CCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred             CCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence            3457899999999999999999999999999999998632100                                     


Q ss_pred             C-----------------------cCeEEEeccCCCChHHHHhcCCCCCH-------HHHHHHHHHHHHHHHHHHHCCCe
Q 048594           89 D-----------------------EGYLKREHCDGGTLVDRISDRERYTE-------RAAASVFRSVVNALHACHSNGIM  138 (483)
Q Consensus        89 ~-----------------------~~~lv~E~~~g~~L~~~l~~~~~l~~-------~~~~~i~~qil~~l~~LH~~~iv  138 (483)
                      +                       ..|+||||| +|+|.+++...+.+++       ..+..++.||+.||.|||++||+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv  228 (377)
T 3byv_A          150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV  228 (377)
T ss_dssp             EEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCee
Confidence            0                       137999999 5699999987655555       78888999999999999999999


Q ss_pred             eeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecccccCCcccCccccCCC-----------CCCCcCchHHHHHH
Q 048594          139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPC-----------KYGKEIDIWSAGLI  207 (483)
Q Consensus       139 H~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DiwslGvi  207 (483)
                      ||||||+|||+   +.++.+||+|||++....  ......+| +.|+|||++.+.           .++.++|||||||+
T Consensus       229 HrDikp~NIll---~~~~~~kL~DFG~a~~~~--~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i  302 (377)
T 3byv_A          229 HTYLRPVDIVL---DQRGGVFLTGFEHLVRDG--ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV  302 (377)
T ss_dssp             CSCCCGGGEEE---CTTCCEEECCGGGCEETT--CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred             cCCCCHHHEEE---cCCCCEEEEechhheecC--CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence            99999999999   567899999999998643  23455678 999999999876           78999999999999


Q ss_pred             HHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          208 LYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       208 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +|+|++|..||.+.........+.        ..++.+++++.+||.+||+.||.+|||+.++|+||||+
T Consensus       303 l~elltg~~Pf~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~  364 (377)
T 3byv_A          303 IYWIWCADLPITKDAALGGSEWIF--------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE  364 (377)
T ss_dssp             HHHHHHSSCCC------CCSGGGG--------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHH
T ss_pred             HHHHHHCCCCCcccccccchhhhh--------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHH
Confidence            999999999997655333222221        22357899999999999999999999999999999997

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=2e-40  Score=335.81  Aligned_cols=231  Identities=23%  Similarity=0.341  Sum_probs=182.7

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------------
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------------   87 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------------   87 (483)
                      .+.+.++|.+.+.||+|+||+||+|++..+|+.||||++.....                                    
T Consensus        32 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~  111 (397)
T 1wak_A           32 GDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK  111 (397)
T ss_dssp             TCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred             hhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence            35667899999999999999999999999999999999865320                                    


Q ss_pred             -----CCcCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCCeEEEeeCC------
Q 048594           88 -----SDEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDD------  153 (483)
Q Consensus        88 -----~~~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~-~ivH~dlkp~NIll~~~~------  153 (483)
                           ....|+||||| +++|.+.+...  ..+++..++.++.||+.||.|||++ ||+||||||+|||+..++      
T Consensus       112 ~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~  190 (397)
T 1wak_A          112 ISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRL  190 (397)
T ss_dssp             EEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred             ecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhh
Confidence                 01128999999 55777777654  5699999999999999999999998 999999999999995321      


Q ss_pred             ----------------------------------------CCCcEEEeecccceeccCCceecccccCCcccCccccCCC
Q 048594          154 ----------------------------------------ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPC  193 (483)
Q Consensus       154 ----------------------------------------~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  193 (483)
                                                              ....+||+|||.+......  ....+||+.|+|||++.+.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~~~~~  268 (397)
T 1wak_A          191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGS  268 (397)
T ss_dssp             HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHHHHTS
T ss_pred             hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChhhcCC
Confidence                                                    1137999999999876533  3456799999999999888


Q ss_pred             CCCCcCchHHHHHHHHHHhhCCCCCCCCCh------HHHHHHHHccccCCC-------------------------CCC-
Q 048594          194 KYGKEIDIWSAGLILYNLLSGAQPFWAESL------YGTLTAIMSREIDFK-------------------------SDP-  241 (483)
Q Consensus       194 ~~~~~~DiwslGvil~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~~-------------------------~~~-  241 (483)
                      .++.++|||||||++|+|++|..||.+.+.      ...+..+....-..+                         ..+ 
T Consensus       269 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (397)
T 1wak_A          269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPW  348 (397)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCC
T ss_pred             CCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCc
Confidence            899999999999999999999999976542      222222221100000                         000 


Q ss_pred             ------------CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          242 ------------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       242 ------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                  ....++.+.+||.+||++||.+|||++|+|+||||+
T Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          349 GLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             CHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             chhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence                        012346788999999999999999999999999996

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=6.2e-40  Score=327.36  Aligned_cols=230  Identities=30%  Similarity=0.466  Sum_probs=189.1

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------------
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------------   87 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------------   87 (483)
                      ...+.++|.+.+.||+|+||.||+|.++.+|+.||||++.....                                    
T Consensus         6 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   85 (353)
T 2b9h_A            6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFEN   85 (353)
T ss_dssp             CCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTT
T ss_pred             ccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCc
Confidence            34678899999999999999999999999999999999864321                                    


Q ss_pred             CCcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           88 SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        88 ~~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                      ....|+|+||+.+ +|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.
T Consensus        86 ~~~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~  160 (353)
T 2b9h_A           86 FNEVYIIQELMQT-DLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLAR  160 (353)
T ss_dssp             CCCEEEEECCCSE-EHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCE
T ss_pred             cceEEEEEeccCc-cHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---cCCCcEEEEeccccc
Confidence            0122999999975 89998876 479999999999999999999999999999999999999   677899999999998


Q ss_pred             eccCCce-----------ecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc
Q 048594          168 FFEEGKV-----------YEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI  235 (483)
Q Consensus       168 ~~~~~~~-----------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~  235 (483)
                      .......           ....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+....+..+.....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  240 (353)
T 2b9h_A          161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG  240 (353)
T ss_dssp             ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC
Confidence            7643211           123478999999998754 5788999999999999999999999998877665554432110


Q ss_pred             ------------------------CCCCC----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          236 ------------------------DFKSD----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       236 ------------------------~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                              ..+..    .++.+++++.+||.+||..||.+|||+.++|+||||+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  311 (353)
T 2b9h_A          241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT  311 (353)
T ss_dssp             CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                                    00100    12468899999999999999999999999999999984

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=324.54  Aligned_cols=228  Identities=28%  Similarity=0.443  Sum_probs=187.1

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------C-
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------D-   89 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------~-   89 (483)
                      ....+.++|.+.+.||+|+||.||+|.++.+|+.||||++......                                . 
T Consensus        18 ~~~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   97 (353)
T 3coi_A           18 TAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS   97 (353)
T ss_dssp             EEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred             cccccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccc
Confidence            3456778999999999999999999999999999999998653210                                0 


Q ss_pred             -----cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           90 -----EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        90 -----~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                           ..|+||||+.+ +|.+++..  ++++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||
T Consensus        98 ~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg  171 (353)
T 3coi_A           98 LRNFYDFYLVMPFMQT-DLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFG  171 (353)
T ss_dssp             GGGCCCCEEEEECCSE-EGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTCCEEECSTT
T ss_pred             cccceeEEEEeccccC-CHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeE---CCCCcEEEeecc
Confidence                 12899999985 88888743  59999999999999999999999999999999999999   677899999999


Q ss_pred             cceeccCCceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc--------
Q 048594          165 LAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI--------  235 (483)
Q Consensus       165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~--------  235 (483)
                      ++......  .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+....+..+.....        
T Consensus       172 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  249 (353)
T 3coi_A          172 LARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ  249 (353)
T ss_dssp             CTTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred             cccCCCCC--ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            99865432  345678999999999876 5789999999999999999999999998887766665543110        


Q ss_pred             ---------------CC----CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          236 ---------------DF----KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       236 ---------------~~----~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                     ..    ....++.+++++.+||.+||..||.+|||++++|+||||+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  311 (353)
T 3coi_A          250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP  311 (353)
T ss_dssp             TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence                           00    01123567999999999999999999999999999999983

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=7.4e-40  Score=319.34  Aligned_cols=229  Identities=26%  Similarity=0.438  Sum_probs=177.8

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------CcCeEE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------DEGYLK   94 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~lv   94 (483)
                      ...++|.+.+.||+|+||+||+|.+..+++.||||++......                               ...|+|
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            3457899999999999999999999999999999998653211                               111899


Q ss_pred             EeccCCCChHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           95 REHCDGGTLVDRISD--------RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~--------~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                      |||++|++|.+++..        ...+++..+..++.||+.||.|||++|++||||+|+||++   +.++.+||+|||.+
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~  168 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVS  168 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTCCEEECCCHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEE---cCCCCEEEEeccch
Confidence            999999999999974        4569999999999999999999999999999999999999   66789999999998


Q ss_pred             eeccCCc------eecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC-
Q 048594          167 FFFEEGK------VYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK-  238 (483)
Q Consensus       167 ~~~~~~~------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-  238 (483)
                      .......      ......||+.|+|||++.+ ..++.++||||||+++|+|++|..||.................... 
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  248 (303)
T 2vwi_A          169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE  248 (303)
T ss_dssp             HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTT
T ss_pred             heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccc
Confidence            7654321      1234578999999999865 4688999999999999999999999988776665554443332211 


Q ss_pred             -----CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          239 -----SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       239 -----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                           ......+++++.++|.+||..||.+|||+.++++||||+
T Consensus       249 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~  292 (303)
T 2vwi_A          249 TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ  292 (303)
T ss_dssp             C-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-
T ss_pred             cccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhh
Confidence                 112356789999999999999999999999999999998

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.7e-39  Score=325.53  Aligned_cols=230  Identities=25%  Similarity=0.407  Sum_probs=181.7

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------------
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------------   89 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------   89 (483)
                      ...+.++|.+.+.||+|+||.||+|.+.. |..||||++.......                                  
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   95 (362)
T 3pg1_A           17 LHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLR   95 (362)
T ss_dssp             HHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred             HHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcccee
Confidence            35677899999999999999999999875 9999999985432110                                  


Q ss_pred             ------------cCeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCC
Q 048594           90 ------------EGYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA  156 (483)
Q Consensus        90 ------------~~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~  156 (483)
                                  ..|+|||||.| +|.+.+... ..+++..+..++.||+.||.|||++||+||||||+||++   +.++
T Consensus        96 ~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~---~~~~  171 (362)
T 3pg1_A           96 DIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL---ADNN  171 (362)
T ss_dssp             EEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTC
T ss_pred             eeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE---cCCC
Confidence                        11899999985 888888755 479999999999999999999999999999999999999   6678


Q ss_pred             cEEEeecccceeccCCceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHcccc
Q 048594          157 TLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI  235 (483)
Q Consensus       157 ~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~  235 (483)
                      .+||+|||++.............||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+......+..+.....
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~  251 (362)
T 3pg1_A          172 DITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVG  251 (362)
T ss_dssp             CEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             CEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence            899999999986655555556689999999999876 5689999999999999999999999999887777666543111


Q ss_pred             ------------------------CCCCC----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          236 ------------------------DFKSD----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       236 ------------------------~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                              ..+..    ..+..++.+.+||.+||++||.+|||+.|+|+||||+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  322 (362)
T 3pg1_A          252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES  322 (362)
T ss_dssp             CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTT
T ss_pred             CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhh
Confidence                                    01111    12456899999999999999999999999999999983

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1e-39  Score=317.42  Aligned_cols=226  Identities=17%  Similarity=0.253  Sum_probs=187.0

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-----------------------------CeEEEe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-----------------------------GYLKRE   96 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-----------------------------~~lv~E   96 (483)
                      .+.++|.+.+.||+|+||.||+|.++.+|+.||||++........                             .|+|||
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            567899999999999999999999999999999999876542211                             189999


Q ss_pred             ccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           97 HCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      |+ +++|.+++.. ..++++..+..++.||+.||.|||++||+||||||+||++...+..+.+||+|||.+........ 
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~  164 (296)
T 3uzp_A           86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence            99 8899999974 46799999999999999999999999999999999999996444667899999999987654322 


Q ss_pred             -------ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC---hHHHHHHHHccccCCCCC-CCC
Q 048594          175 -------YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES---LYGTLTAIMSREIDFKSD-PWP  243 (483)
Q Consensus       175 -------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~---~~~~~~~i~~~~~~~~~~-~~~  243 (483)
                             .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+..   .......+.......+.. ..+
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (296)
T 3uzp_A          165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK  244 (296)
T ss_dssp             CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTT
T ss_pred             cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHh
Confidence                   234579999999999999889999999999999999999999997633   233444444333322211 124


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+|+++.++|.+||+.||.+|||+.++++
T Consensus       245 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          245 GYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             TSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             hCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            67899999999999999999999999876

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.5e-39  Score=323.92  Aligned_cols=227  Identities=26%  Similarity=0.470  Sum_probs=194.3

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------------   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------   88 (483)
                      ..+.++|.+.+.||+|+||.||+|.+  +|+.||+|++......                                    
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~  104 (348)
T 2pml_X           27 DKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEY  104 (348)
T ss_dssp             CEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTT
T ss_pred             ccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCC
Confidence            45567999999999999999999999  8999999998654211                                    


Q ss_pred             -----------CcCeEEEeccCCCChHHH------Hhc--CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEE
Q 048594           89 -----------DEGYLKREHCDGGTLVDR------ISD--RERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFI  148 (483)
Q Consensus        89 -----------~~~~lv~E~~~g~~L~~~------l~~--~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIl  148 (483)
                                 ...|+|||||+|++|.++      +..  ...+++..+..++.||+.||.|||+ +|++|+||+|+||+
T Consensus       105 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil  184 (348)
T 2pml_X          105 CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL  184 (348)
T ss_dssp             BCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEE
T ss_pred             cceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEE
Confidence                       011999999999999998      665  5789999999999999999999999 99999999999999


Q ss_pred             EeeCCCCCcEEEeecccceeccCCceecccccCCcccCccccCCC-CCCC-cCchHHHHHHHHHHhhCCCCCCCCCh-HH
Q 048594          149 FTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPC-KYGK-EIDIWSAGLILYNLLSGAQPFWAESL-YG  225 (483)
Q Consensus       149 l~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DiwslGvil~~ll~g~~pf~~~~~-~~  225 (483)
                      +   +.++.++|+|||.+...... ......|++.|+|||++.+. .++. ++||||+|+++|+|++|..||..... ..
T Consensus       185 ~---~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  260 (348)
T 2pml_X          185 M---DKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE  260 (348)
T ss_dssp             E---CTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH
T ss_pred             E---cCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence            9   67789999999999876544 34556899999999999876 5555 99999999999999999999988776 67


Q ss_pred             HHHHHHccccCCCCCC---------------CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          226 TLTAIMSREIDFKSDP---------------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       226 ~~~~i~~~~~~~~~~~---------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ....+......++...               .+.+++++.+||.+||..||.+|||+.++++||||.
T Consensus       261 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~  327 (348)
T 2pml_X          261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLA  327 (348)
T ss_dssp             HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGT
T ss_pred             HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCcccc
Confidence            7777776655544211               146899999999999999999999999999999998

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=7.2e-40  Score=315.89  Aligned_cols=224  Identities=29%  Similarity=0.446  Sum_probs=191.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~l   93 (483)
                      .++|++.+.||+|+||.||+|.++.+|+.||+|.+......                                  ...|+
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            46899999999999999999999999999999999754311                                  11189


Q ss_pred             EEeccCCCChHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC-----CeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           94 KREHCDGGTLVDRISDR----ERYTERAAASVFRSVVNALHACHSNG-----IMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~----~~l~~~~~~~i~~qil~~l~~LH~~~-----ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                      |||||+|++|.+++...    ..+++..+..++.||+.||.|||+++     ++|+||||+||++   +.++.+||+|||
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~---~~~~~~kl~dfg  161 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFG  161 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEE---CSSSCEEECCCC
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEE---cCCCCEEEecCc
Confidence            99999999999999753    35999999999999999999999999     9999999999999   667889999999


Q ss_pred             cceeccCCc-eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCC
Q 048594          165 LAFFFEEGK-VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       165 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  243 (483)
                      .+....... ......|++.|+|||++.+..++.++||||||+++|+|++|..||...........+..+....   ...
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~  238 (279)
T 2w5a_A          162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPY  238 (279)
T ss_dssp             HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC---CCT
T ss_pred             hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccccc---CCc
Confidence            997664332 2234578999999999988889999999999999999999999999888877777777665422   124


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .++.++.++|.+||..||.+|||+.++++|+|+.
T Consensus       239 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~  272 (279)
T 2w5a_A          239 RYSDELNEIITRMLNLKDYHRPSVEEILENPLIL  272 (279)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred             ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence            6789999999999999999999999999999997

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=2e-39  Score=315.69  Aligned_cols=227  Identities=15%  Similarity=0.227  Sum_probs=185.9

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC-----------------------------eEEE
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG-----------------------------YLKR   95 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------------------~lv~   95 (483)
                      ..+.++|.+.+.||+|+||.||+|.+..+|+.||||++.........                             |+||
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   85 (298)
T 1csn_A            6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   85 (298)
T ss_dssp             CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence            45678899999999999999999999999999999998755422111                             8999


Q ss_pred             eccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC--CCCcEEEeecccceeccCC
Q 048594           96 EHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD--ENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        96 E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~--~~~~ikl~Dfg~a~~~~~~  172 (483)
                      ||+ |++|.+++... .++++..+..++.||+.||.|||++||+||||||+||++..++  ....+||+|||++......
T Consensus        86 e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~  164 (298)
T 1csn_A           86 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  164 (298)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             Eec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence            999 88999999875 4699999999999999999999999999999999999995431  2334999999999876543


Q ss_pred             ce--------ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCC---ChHHHHHHHHccccCCC-CC
Q 048594          173 KV--------YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE---SLYGTLTAIMSREIDFK-SD  240 (483)
Q Consensus       173 ~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~---~~~~~~~~i~~~~~~~~-~~  240 (483)
                      ..        .....||+.|+|||++.+..++.++||||||+++|+|++|..||.+.   ........+.......+ ..
T Consensus       165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (298)
T 1csn_A          165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE  244 (298)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH
T ss_pred             cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHH
Confidence            21        23457999999999999888999999999999999999999999874   33344444433322221 11


Q ss_pred             CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       241 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ..+.+|+++.++|.+||..||.+|||++++++
T Consensus       245 ~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          245 LCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence            12468899999999999999999999999876

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=1.8e-39  Score=317.21  Aligned_cols=224  Identities=25%  Similarity=0.480  Sum_probs=191.0

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------------CCc
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------------SDE   90 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------------~~~   90 (483)
                      +.++|.+.+.||+|+||.||+|.++.+++.+|+|++.....                                    ...
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence            55789999999999999999999999999999999865320                                    011


Q ss_pred             CeEEEeccCCCChHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           91 GYLKREHCDGGTLVDRISD--RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~--~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      .|+|||||.++ |.+++..  ...+++..+..++.||+.||.|||++|++||||||+||++   +.++.++|+|||.+..
T Consensus        83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~---~~~~~~kl~dfg~~~~  158 (305)
T 2wtk_C           83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL---TTGGTLKISALGVAEA  158 (305)
T ss_dssp             EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEE
T ss_pred             EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---cCCCcEEeeccccccc
Confidence            29999999986 7777765  4579999999999999999999999999999999999999   6678999999999987


Q ss_pred             ccC---CceecccccCCcccCccccCCCCC--CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCC
Q 048594          169 FEE---GKVYEEVVGTPLYMAPELLGPCKY--GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       169 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~--~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  243 (483)
                      ...   ........||+.|+|||++.+...  +.++||||||+++|+|++|..||.+.........+......++    .
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~----~  234 (305)
T 2wtk_C          159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP----G  234 (305)
T ss_dssp             CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC----S
T ss_pred             cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC----C
Confidence            643   223345578999999999976443  6799999999999999999999999888888888877655443    4


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      .+++.+.+||.+||..||.+|||+.++++||||+.
T Consensus       235 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~  269 (305)
T 2wtk_C          235 DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK  269 (305)
T ss_dssp             SSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHS
T ss_pred             ccCHHHHHHHHHHccCChhhCCCHHHHhcCccccc
Confidence            67899999999999999999999999999999984

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.4e-39  Score=316.95  Aligned_cols=226  Identities=29%  Similarity=0.477  Sum_probs=183.7

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------------------------   87 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------------------------   87 (483)
                      .+.++|.+.+.||+|+||.||+|.+..+|+.||||++.....                                      
T Consensus         3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             cccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            356789999999999999999999999999999999864210                                      


Q ss_pred             ----CCcCeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEee
Q 048594           88 ----SDEGYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD  162 (483)
Q Consensus        88 ----~~~~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~D  162 (483)
                          ....|+|||||+|++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||++   +.++.+||+|
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~---~~~~~~kl~d  159 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGD  159 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECC
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEE---cCCCCEEEee
Confidence                11228999999999999999854 468899999999999999999999999999999999999   6778999999


Q ss_pred             cccceeccCC---------------ceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCC-ChHH
Q 048594          163 FGLAFFFEEG---------------KVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAE-SLYG  225 (483)
Q Consensus       163 fg~a~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~-~~~~  225 (483)
                      ||.+......               .......||+.|+|||++.+. .++.++|||||||++|+|++   ||... ....
T Consensus       160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~  236 (303)
T 1zy4_A          160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN  236 (303)
T ss_dssp             CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred             CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence            9998765421               122345789999999999764 68999999999999999998   55432 3344


Q ss_pred             HHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          226 TLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       226 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ....+......++.......++.+.++|.+||..||.+|||+.++++||||.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~  288 (303)
T 1zy4_A          237 ILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLP  288 (303)
T ss_dssp             HHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSC
T ss_pred             HHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcC
Confidence            5556665555555555567788999999999999999999999999999997

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=1.3e-39  Score=320.93  Aligned_cols=222  Identities=31%  Similarity=0.553  Sum_probs=187.6

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------   89 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------   89 (483)
                      ..+.+.++|.+.+.||+|+||.||+|.++.+|+.||||++.......                                 
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~  116 (320)
T 3a99_A           37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW  116 (320)
T ss_dssp             ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred             ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence            44678889999999999999999999999999999999987653211                                 


Q ss_pred             -----cCeEEEeccCC-CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeec
Q 048594           90 -----EGYLKREHCDG-GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDF  163 (483)
Q Consensus        90 -----~~~lv~E~~~g-~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Df  163 (483)
                           ..|+|+|++.+ ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++  ...+.+||+||
T Consensus       117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~--~~~~~~kL~Df  194 (320)
T 3a99_A          117 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDF  194 (320)
T ss_dssp             EECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECCC
T ss_pred             EecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEe--CCCCCEEEeeC
Confidence                 11899999986 89999999888999999999999999999999999999999999999994  25678999999


Q ss_pred             ccceeccCCceecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCC
Q 048594          164 GLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW  242 (483)
Q Consensus       164 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  242 (483)
                      |++...... ......||+.|+|||++.+..+ +.++||||||+++|+|++|..||....      .+......+    .
T Consensus       195 g~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~----~  263 (320)
T 3a99_A          195 GSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFF----R  263 (320)
T ss_dssp             TTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCC----S
T ss_pred             ccccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhcccccc----c
Confidence            999876543 2345679999999999876565 678999999999999999999996532      222332222    2


Q ss_pred             CCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       243 ~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +.+++++.+||.+||..||.+|||+.++++||||+
T Consensus       264 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~  298 (320)
T 3a99_A          264 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ  298 (320)
T ss_dssp             SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhc
Confidence            46889999999999999999999999999999998

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=1.5e-39  Score=316.15  Aligned_cols=226  Identities=17%  Similarity=0.254  Sum_probs=181.0

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-----------------------------CeEEEe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-----------------------------GYLKRE   96 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-----------------------------~~lv~E   96 (483)
                      .+.++|.+.+.||+|+||+||+|.+..+++.||||++........                             .|+|||
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            466899999999999999999999999999999998765432211                             189999


Q ss_pred             ccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           97 HCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      || +++|.+++.. ..++++..+..++.||+.||.|||++||+||||||+|||+...+..+.+||+|||.+........ 
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~  164 (296)
T 4hgt_A           86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence            99 8899999984 46799999999999999999999999999999999999995444667899999999987654321 


Q ss_pred             -------ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh---HHHHHHHHccccCCCCC-CCC
Q 048594          175 -------YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL---YGTLTAIMSREIDFKSD-PWP  243 (483)
Q Consensus       175 -------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~---~~~~~~i~~~~~~~~~~-~~~  243 (483)
                             .....||+.|+|||++.+..++.++||||+||++|+|++|..||.+...   ......+.......+.. ..+
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (296)
T 4hgt_A          165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK  244 (296)
T ss_dssp             CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTT
T ss_pred             ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhc
Confidence                   2345789999999999998899999999999999999999999976432   23333333332222211 124


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+|+++.++|.+||+.||.+|||+.++++
T Consensus       245 ~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          245 GYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             TSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             cCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            67899999999999999999999999876

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=2.5e-39  Score=320.30  Aligned_cols=223  Identities=17%  Similarity=0.190  Sum_probs=181.7

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC-----------------------------eEEEe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG-----------------------------YLKRE   96 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------------------~lv~E   96 (483)
                      .+.++|.+.+.||+|+||.||+|.++.+|+.||||++.........                             |+|||
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            3567899999999999999999999999999999998765422111                             89999


Q ss_pred             ccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCc-----EEEeecccceecc
Q 048594           97 HCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENAT-----LKATDFGLAFFFE  170 (483)
Q Consensus        97 ~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~-----ikl~Dfg~a~~~~  170 (483)
                      || |++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+.   ..+.     +||+|||++....
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~---~~~~~~~~~~kl~DFg~a~~~~  161 (330)
T 2izr_A           86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIG---RPGNKTQQVIHIIDFALAKEYI  161 (330)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---CGGGTCTTSEEECCCTTCEESB
T ss_pred             eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec---cCCCCCCceEEEEEcccceeee
Confidence            99 8899999986 46899999999999999999999999999999999999994   4444     9999999998764


Q ss_pred             CCce--------ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC---hHHHHHHHHccccCCCC
Q 048594          171 EGKV--------YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES---LYGTLTAIMSREIDFKS  239 (483)
Q Consensus       171 ~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~---~~~~~~~i~~~~~~~~~  239 (483)
                      ....        ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+..   .......+.......+.
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~  241 (330)
T 2izr_A          162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI  241 (330)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH
T ss_pred             cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH
Confidence            3321        235679999999999999889999999999999999999999998743   33444554443333222


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .......+++.++|..||..||.+||+++++++
T Consensus       242 ~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          242 EVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            111122239999999999999999999988776

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=7.8e-39  Score=313.95  Aligned_cols=227  Identities=22%  Similarity=0.296  Sum_probs=182.4

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------cC
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------EG   91 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------~~   91 (483)
                      .+...++|.+.+.||+|+||+||+|.+  +|..||||++.......                                ..
T Consensus        32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  109 (309)
T 3p86_A           32 MDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL  109 (309)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred             ccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence            344467899999999999999999987  48899999987653211                                12


Q ss_pred             eEEEeccCCCChHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHHCC--CeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           92 YLKREHCDGGTLVDRISDRER---YTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~---l~~~~~~~i~~qil~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                      |+|||||.|++|.+++.....   +++..+..++.||+.||.|||++|  |+||||||+||++   +.++.+||+|||++
T Consensus       110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll---~~~~~~kL~Dfg~a  186 (309)
T 3p86_A          110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGLS  186 (309)
T ss_dssp             EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE---CTTCCEEECCCC--
T ss_pred             EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE---eCCCcEEECCCCCC
Confidence            999999999999999987654   999999999999999999999999  9999999999999   67789999999999


Q ss_pred             eeccCCc-eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCC
Q 048594          167 FFFEEGK-VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       167 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      ....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.........+........  ....+
T Consensus       187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~  264 (309)
T 3p86_A          187 RLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE--IPRNL  264 (309)
T ss_dssp             ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCC--CCTTS
T ss_pred             ccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC--CCccC
Confidence            7654322 23346799999999999998899999999999999999999999998887777766643333222  22478


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHc--CCcCC
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILK--HPWLN  277 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~--h~~~~  277 (483)
                      ++++.+||.+||..||.+|||+.++++  .++++
T Consensus       265 ~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          265 NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999987  45554

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.5e-39  Score=319.41  Aligned_cols=230  Identities=27%  Similarity=0.409  Sum_probs=184.5

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------------
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------------   87 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------------   87 (483)
                      ...+.++|.+++.||+|+||.||+|.++.+|+.||+|++.....                                    
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   85 (320)
T 2i6l_A            6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT   85 (320)
T ss_dssp             CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred             cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence            35678899999999999999999999999999999999864320                                    


Q ss_pred             --------CCcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEE
Q 048594           88 --------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLK  159 (483)
Q Consensus        88 --------~~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ik  159 (483)
                              ....|+||||+.| +|.+++.. +++++..+..++.||+.||.|||++||+||||||+||++.  ...+.+|
T Consensus        86 ~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~~k  161 (320)
T 2i6l_A           86 DDVGSLTELNSVYIVQEYMET-DLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN--TEDLVLK  161 (320)
T ss_dssp             C----CCSCSEEEEEEECCSE-EHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE--TTTTEEE
T ss_pred             cccccccccCceeEEeeccCC-CHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc--CCCCeEE
Confidence                    0122799999985 99999865 5799999999999999999999999999999999999995  2456899


Q ss_pred             EeecccceeccCC----ceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc
Q 048594          160 ATDFGLAFFFEEG----KVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE  234 (483)
Q Consensus       160 l~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~  234 (483)
                      |+|||.+......    .......+++.|+|||.+.+ ..++.++||||||+++|+|++|..||.+.........+....
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  241 (320)
T 2i6l_A          162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI  241 (320)
T ss_dssp             ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHS
T ss_pred             EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            9999999876432    12234567999999998754 578899999999999999999999999988777666655432


Q ss_pred             cCC----------------------CCC----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          235 IDF----------------------KSD----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       235 ~~~----------------------~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ...                      +..    .++.+++++.+||.+||+.||.+|||++++|+||||+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  310 (320)
T 2i6l_A          242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMS  310 (320)
T ss_dssp             CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHH
T ss_pred             CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccc
Confidence            111                      111    1246899999999999999999999999999999998

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.7e-39  Score=326.57  Aligned_cols=228  Identities=21%  Similarity=0.360  Sum_probs=181.4

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------------   87 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------------   87 (483)
                      ..+|.+.+.||+|+||+||+|.++.+|+.||||++.....                                        
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            4589999999999999999999999999999999864310                                        


Q ss_pred             ----CCcCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCCeEEEeeC---CCCCc
Q 048594           88 ----SDEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTD---DENAT  157 (483)
Q Consensus        88 ----~~~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~-~ivH~dlkp~NIll~~~---~~~~~  157 (483)
                          ....++|+||+ |++|.+++...  ..+++..+..++.||+.||.|||++ ||+||||||+|||+...   +..+.
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~  176 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ  176 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcce
Confidence                00228999999 88999999763  4699999999999999999999998 99999999999999643   23457


Q ss_pred             EEEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC------hHHHHHHHH
Q 048594          158 LKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES------LYGTLTAIM  231 (483)
Q Consensus       158 ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~------~~~~~~~i~  231 (483)
                      +||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+..      ....+..+.
T Consensus       177 ~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  254 (373)
T 1q8y_A          177 IKIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII  254 (373)
T ss_dssp             EEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred             EEEcccccccccCCC--CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence            999999999876533  344578999999999998889999999999999999999999997654      222222222


Q ss_pred             ccccCCC--------------------------------------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          232 SREIDFK--------------------------------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       232 ~~~~~~~--------------------------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ......+                                      ....+..+.++.+||.+||+.||.+|||++|+|+|
T Consensus       255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  334 (373)
T 1q8y_A          255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  334 (373)
T ss_dssp             HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence            1100000                                      00012345788999999999999999999999999


Q ss_pred             CcCCC
Q 048594          274 PWLNY  278 (483)
Q Consensus       274 ~~~~~  278 (483)
                      |||+.
T Consensus       335 p~f~~  339 (373)
T 1q8y_A          335 PWLKD  339 (373)
T ss_dssp             GGGTT
T ss_pred             hhhhc
Confidence            99984

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-39  Score=326.60  Aligned_cols=229  Identities=20%  Similarity=0.262  Sum_probs=191.1

Q ss_pred             ccccceEEeeeecccCceeEEEEE-----ECCCCCEEEEEEeccCCC-------------------------------CC
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCT-----ENSTGLQFACKSISKTSK-------------------------------SD   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~~avK~~~~~~~-------------------------------~~   89 (483)
                      ...++|.+.+.||+|+||+||+|.     +..++..||||++.....                               ..
T Consensus        68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~  147 (367)
T 3l9p_A           68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  147 (367)
T ss_dssp             CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence            446789999999999999999999     556788999999864321                               11


Q ss_pred             cCeEEEeccCCCChHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEee
Q 048594           90 EGYLKREHCDGGTLVDRISDR-------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATD  162 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~-------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~D  162 (483)
                      ..|+|||||.|++|.+++...       ..+++..+..++.||+.||.|||++||+||||||+|||+..++....+||+|
T Consensus       148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECC
Confidence            229999999999999999764       3599999999999999999999999999999999999996554566799999


Q ss_pred             cccceeccCC---ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCC
Q 048594          163 FGLAFFFEEG---KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFK  238 (483)
Q Consensus       163 fg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~  238 (483)
                      ||++......   .......||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.........+....... 
T Consensus       228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~-  306 (367)
T 3l9p_A          228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD-  306 (367)
T ss_dssp             CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC-
T ss_pred             CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-
Confidence            9999754321   12234567899999999988889999999999999999998 999999988888888877654322 


Q ss_pred             CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          239 SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       239 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                        ....++..+.+||.+||+.||.+|||+.++++|.++.
T Consensus       307 --~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          307 --PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             --CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence              2346789999999999999999999999999987764

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=6.8e-39  Score=314.84  Aligned_cols=230  Identities=23%  Similarity=0.395  Sum_probs=172.9

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------Cc
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------DE   90 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------~~   90 (483)
                      .+..-.++|.+.+.||+|+||.||+|.++.+|+.||||++......                                ..
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~   98 (318)
T 2dyl_A           19 RYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD   98 (318)
T ss_dssp             EEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             hhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCc
Confidence            3444557899999999999999999999999999999999764311                                11


Q ss_pred             CeEEEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           91 GYLKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      .|+||||+ ++.+..+... ...+++..+..++.||+.||.|||++ |++|+||||+||++   +.++.+||+|||++..
T Consensus        99 ~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~  174 (318)
T 2dyl_A           99 VFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISGR  174 (318)
T ss_dssp             EEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEE---CTTSCEEECCCTTC--
T ss_pred             EEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEE---CCCCCEEEEECCCchh
Confidence            19999999 5455555443 56899999999999999999999995 99999999999999   6778999999999987


Q ss_pred             ccCCceecccccCCcccCccccC-----CCCCCCcCchHHHHHHHHHHhhCCCCCCCC-ChHHHHHHHHccccCCCCCCC
Q 048594          169 FEEGKVYEEVVGTPLYMAPELLG-----PCKYGKEIDIWSAGLILYNLLSGAQPFWAE-SLYGTLTAIMSREIDFKSDPW  242 (483)
Q Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~  242 (483)
                      ...........||+.|+|||++.     ...++.++||||+|+++|+|++|..||... ........+........ +..
T Consensus       175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~  253 (318)
T 2dyl_A          175 LVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL-PGH  253 (318)
T ss_dssp             ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCC-CSS
T ss_pred             ccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCC-Ccc
Confidence            65554445567999999999984     456788999999999999999999999873 44555555555433222 223


Q ss_pred             CCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          243 PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       243 ~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ..+++++.+||.+||..||.+|||+.++++||||+
T Consensus       254 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~  288 (318)
T 2dyl_A          254 MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK  288 (318)
T ss_dssp             SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHH
T ss_pred             CCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHH
Confidence            46899999999999999999999999999999997

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=1.8e-39  Score=320.67  Aligned_cols=226  Identities=23%  Similarity=0.368  Sum_probs=164.6

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC--------------------------------CcCeEEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------------------DEGYLKR   95 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------------~~~~lv~   95 (483)
                      .++|.+.+.||+|+||.||+|.++.+|+.||||++......                                ...|+||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            46899999999999999999999999999999999764311                                1118999


Q ss_pred             eccCCCChHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           96 EHCDGGTLVDRISD-----RERYTERAAASVFRSVVNALHACHSN-GIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        96 E~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qil~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      |||.| +|.+++..     ...+++..+..++.||+.||.|||+. ||+||||||+||++   +.++.+||+|||++...
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL---DRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEE---ETTTEEEECCCSSSCC-
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEE---cCCCCEEEccCCCceec
Confidence            99987 78887763     56899999999999999999999999 99999999999999   56779999999999877


Q ss_pred             cCCceecccccCCcccCcccc----CCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHccc-cCCCCCCCC
Q 048594          170 EEGKVYEEVVGTPLYMAPELL----GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY-GTLTAIMSRE-IDFKSDPWP  243 (483)
Q Consensus       170 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~-~~~~~i~~~~-~~~~~~~~~  243 (483)
                      ..........||+.|+|||++    .+..++.++||||||+++|+|++|..||.+.... .....+..+. ..++.....
T Consensus       177 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (327)
T 3aln_A          177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEER  256 (327)
T ss_dssp             -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSC
T ss_pred             ccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccc
Confidence            554444455799999999998    4556889999999999999999999999764321 2222222211 122222335


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+++.+.+||.+||..||.+|||+.++++||||.
T Consensus       257 ~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~  290 (327)
T 3aln_A          257 EFSPSFINFVNLCLTKDESKRPKYKELLKHPFIL  290 (327)
T ss_dssp             CCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             cCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHH
Confidence            6899999999999999999999999999999997

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=3.6e-38  Score=305.38  Aligned_cols=222  Identities=20%  Similarity=0.276  Sum_probs=181.2

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------------cC
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------------EG   91 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------------~~   91 (483)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|++.......                                   ..
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   96 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP   96 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred             hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence            3468999999999999999999999999999999986543211                                   11


Q ss_pred             eEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeeeCCCCCeEEEeeCC--CCCcEEEeecccc
Q 048594           92 YLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDD--ENATLKATDFGLA  166 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~--ivH~dlkp~NIll~~~~--~~~~ikl~Dfg~a  166 (483)
                      ++|||||++++|.+++... .++++..+..++.||+.||.|||++|  |+||||||+||++..++  ....+||+|||++
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~  176 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS  176 (287)
T ss_dssp             EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTC
T ss_pred             eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcc
Confidence            8999999999999988655 57999999999999999999999999  99999999999995322  1223999999999


Q ss_pred             eeccCCceecccccCCcccCccccC--CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHH--HHHHHccccCCCCCCC
Q 048594          167 FFFEEGKVYEEVVGTPLYMAPELLG--PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGT--LTAIMSREIDFKSDPW  242 (483)
Q Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~  242 (483)
                      .....  ......||+.|+|||++.  ...++.++||||+|+++|+|++|..||........  ...+.....  .....
T Consensus       177 ~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~  252 (287)
T 4f0f_A          177 QQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL--RPTIP  252 (287)
T ss_dssp             BCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC--CCCCC
T ss_pred             ccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC--CCCCC
Confidence            86443  234567999999999984  44568899999999999999999999977554333  333333322  22233


Q ss_pred             CCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          243 PTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       243 ~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ..+++++.++|.+||..||.+|||+.++++
T Consensus       253 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          253 EDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            578999999999999999999999999986

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=8.1e-39  Score=315.39  Aligned_cols=226  Identities=18%  Similarity=0.246  Sum_probs=172.8

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCC---EEEEEEeccCCCC--------------------------------Cc
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGL---QFACKSISKTSKS--------------------------------DE   90 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~avK~~~~~~~~--------------------------------~~   90 (483)
                      ...++|.+.+.||+|+||+||+|.++.++.   .||||++......                                ..
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence            345689999999999999999999887775   8999998754210                                00


Q ss_pred             C------eEEEeccCCCChHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           91 G------YLKREHCDGGTLVDRISDRE------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        91 ~------~lv~E~~~g~~L~~~l~~~~------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                      .      |+|+|||.+++|.+++....      .+++..+..++.||+.||.|||++||+||||||+||++   +.++.+
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli---~~~~~~  176 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML---AEDMTV  176 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCE
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEE---cCCCCE
Confidence            1      79999999999999996432      69999999999999999999999999999999999999   677899


Q ss_pred             EEeecccceeccCCcee---cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccc
Q 048594          159 KATDFGLAFFFEEGKVY---EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSRE  234 (483)
Q Consensus       159 kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~  234 (483)
                      ||+|||++.........   ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+.........+....
T Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~  256 (323)
T 3qup_A          177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN  256 (323)
T ss_dssp             EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC
T ss_pred             EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC
Confidence            99999999876443322   23356778999999988889999999999999999999 999999988888877776654


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHhCccCCCCCCC-------HHHHHcCCcCC
Q 048594          235 IDFKSDPWPTISSSAKDLIRRMLIRDPNNQIT-------VAQILKHPWLN  277 (483)
Q Consensus       235 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-------~~e~L~h~~~~  277 (483)
                      ..   ...+.+++++.+||.+||..||.+|||       .++++.|||+.
T Consensus       257 ~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~  303 (323)
T 3qup_A          257 RL---KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVL  303 (323)
T ss_dssp             CC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred             CC---CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhc
Confidence            32   223578899999999999999999999       78899999998

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=3.8e-39  Score=322.39  Aligned_cols=223  Identities=19%  Similarity=0.274  Sum_probs=183.9

Q ss_pred             ccccceEEeeeecccCceeEEEEE-----ECCCCCEEEEEEeccCCCC--------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCT-----ENSTGLQFACKSISKTSKS--------------------------------   88 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~~avK~~~~~~~~--------------------------------   88 (483)
                      --.++|.+.+.||+|+||.||+|.     +..+++.||||++......                                
T Consensus        19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~   98 (359)
T 3vhe_A           19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP   98 (359)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence            345789999999999999999999     5667899999999764210                                


Q ss_pred             -CcCeEEEeccCCCChHHHHhcCCC-------------------------------------------------------
Q 048594           89 -DEGYLKREHCDGGTLVDRISDRER-------------------------------------------------------  112 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~~~-------------------------------------------------------  112 (483)
                       ...|+|||||.||+|.+++.....                                                       
T Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (359)
T 3vhe_A           99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE  178 (359)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred             CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence             112899999999999999986543                                                       


Q ss_pred             -----------CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc---eeccc
Q 048594          113 -----------YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---VYEEV  178 (483)
Q Consensus       113 -----------l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~---~~~~~  178 (483)
                                 +++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.......   .....
T Consensus       179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  255 (359)
T 3vhe_A          179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGDA  255 (359)
T ss_dssp             -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred             cccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCcEEEEeccceeeecccccchhcccc
Confidence                       8999999999999999999999999999999999999   567789999999998664322   22345


Q ss_pred             ccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhC
Q 048594          179 VGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML  257 (483)
Q Consensus       179 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  257 (483)
                      .||+.|+|||++.+..++.++|||||||++|+|++ |..||.+..................  ....+++++.++|.+||
T Consensus       256 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l  333 (359)
T 3vhe_A          256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR--APDYTTPEMYQTMLDCW  333 (359)
T ss_dssp             EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC--CCTTCCHHHHHHHHHHT
T ss_pred             CCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHHc
Confidence            68889999999988889999999999999999998 9999988765444433333322222  22468899999999999


Q ss_pred             ccCCCCCCCHHHHHcC
Q 048594          258 IRDPNNQITVAQILKH  273 (483)
Q Consensus       258 ~~dP~~R~t~~e~L~h  273 (483)
                      ..||.+|||+.++++|
T Consensus       334 ~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          334 HGEPSQRPTFSELVEH  349 (359)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCChhhCCCHHHHHHH
Confidence            9999999999999875

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=1.7e-38  Score=313.83  Aligned_cols=221  Identities=19%  Similarity=0.299  Sum_probs=185.7

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCC---EEEEEEeccCCCC-------------------------------CcC
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGL---QFACKSISKTSKS-------------------------------DEG   91 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~avK~~~~~~~~-------------------------------~~~   91 (483)
                      ...++|.+.+.||+|+||+||+|.++.+|.   .||||++......                               ...
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  125 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA  125 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence            345799999999999999999999986665   4999999764211                               112


Q ss_pred             eEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           92 YLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      |+|||||+|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus       126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~  202 (325)
T 3kul_A          126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLE  202 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCSSCEECC
T ss_pred             EEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---CCCCCEEECCCCcccccc
Confidence            9999999999999999754 689999999999999999999999999999999999999   677899999999998765


Q ss_pred             CCc----eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCC
Q 048594          171 EGK----VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       171 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      ...    ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+.........+.....   .+....+
T Consensus       203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~  279 (325)
T 3kul_A          203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYR---LPAPMGC  279 (325)
T ss_dssp             ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCC---CCCCTTC
T ss_pred             cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCC---CCCCCCc
Confidence            332    1223346778999999988788999999999999999999 9999999888888887776532   1223578


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ++.+.++|.+||..||.+|||+.++++
T Consensus       280 ~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          280 PHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            999999999999999999999999886

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=7.7e-39  Score=311.08  Aligned_cols=224  Identities=24%  Similarity=0.367  Sum_probs=179.2

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------cCeEEEeccCC
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------EGYLKREHCDG  100 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------~~~lv~E~~~g  100 (483)
                      |.....||+|+||.||+|.+..++..||+|.+.......                              ..|+|||||++
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  103 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG  103 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence            344558999999999999999999999999987653211                              11899999999


Q ss_pred             CChHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-eec
Q 048594          101 GTLVDRISDR---ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VYE  176 (483)
Q Consensus       101 ~~L~~~l~~~---~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~~  176 (483)
                      ++|.+++...   ..+++..+..++.||+.||.|||++|++|+||||+||++.  ..++.+||+|||.+....... ...
T Consensus       104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~--~~~~~~kl~Dfg~~~~~~~~~~~~~  181 (295)
T 2clq_A          104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN--TYSGVLKISDFGTSKRLAGINPCTE  181 (295)
T ss_dssp             EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTCCEEECCTTTCEESCC-----C
T ss_pred             CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEE--CCCCCEEEeecccccccCCCCCccc
Confidence            9999999765   3567999999999999999999999999999999999995  226789999999998765322 233


Q ss_pred             ccccCCcccCccccCCCC--CCCcCchHHHHHHHHHHhhCCCCCCCCChHHH-HHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          177 EVVGTPLYMAPELLGPCK--YGKEIDIWSAGLILYNLLSGAQPFWAESLYGT-LTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~--~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ...|++.|+|||++.+..  ++.++||||||+++|+|++|..||........ ......  ..........+++++.++|
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li  259 (295)
T 2clq_A          182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM--FKVHPEIPESMSAEAKAFI  259 (295)
T ss_dssp             CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHH--HCCCCCCCTTSCHHHHHHH
T ss_pred             ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcc--ccccccccccCCHHHHHHH
Confidence            457899999999986543  78899999999999999999999976433221 111111  1112222356899999999


Q ss_pred             HHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          254 RRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      .+||..||.+|||+.++|+||||+.
T Consensus       260 ~~~l~~dp~~Rps~~~ll~~~~~~~  284 (295)
T 2clq_A          260 LKCFEPDPDKRACANDLLVDEFLKV  284 (295)
T ss_dssp             HHTTCSSTTTSCCHHHHHTSGGGCC
T ss_pred             HHHccCChhhCCCHHHHhcChhhhh
Confidence            9999999999999999999999983

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.9e-38  Score=304.21  Aligned_cols=220  Identities=20%  Similarity=0.299  Sum_probs=187.3

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------cCeEEEec
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------EGYLKREH   97 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~lv~E~   97 (483)
                      -.++|++.+.||+|+||+||+|.++ ++..||+|++.......                             ..|+||||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            3568999999999999999999877 56789999997654211                             11899999


Q ss_pred             cCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee-
Q 048594           98 CDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY-  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~-  175 (483)
                      |+|++|.+++... ..+++..+..++.||+.||.|||++|++||||||+||++   +.++.++|+|||.+......... 
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~~~  161 (268)
T 3sxs_A           85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVLDDQYVS  161 (268)
T ss_dssp             CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE---CTTCCEEECCTTCEEECCTTCEEE
T ss_pred             cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE---CCCCCEEEccCccceecchhhhhc
Confidence            9999999999765 459999999999999999999999999999999999999   67789999999999876544322 


Q ss_pred             -cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          176 -EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       176 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                       ....+|+.|+|||.+.+..++.++||||+|+++|+|++ |..||...........+........   ....++.+.++|
T Consensus       162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li  238 (268)
T 3sxs_A          162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR---PHLASDTIYQIM  238 (268)
T ss_dssp             CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CTTSCHHHHHHH
T ss_pred             ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCC---CCcChHHHHHHH
Confidence             23345678999999988788999999999999999999 9999998888877777766543322   245789999999


Q ss_pred             HHhCccCCCCCCCHHHHHcC
Q 048594          254 RRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .+||+.||.+|||+.+++++
T Consensus       239 ~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          239 YSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999985

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=312.58  Aligned_cols=222  Identities=28%  Similarity=0.527  Sum_probs=182.9

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------   88 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------   88 (483)
                      ..+.+.++|.+.+.||+|+||.||+|.++.+|+.||||++......                                  
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~  104 (312)
T 2iwi_A           25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL  104 (312)
T ss_dssp             --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred             chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence            3467788999999999999999999999999999999999654210                                  


Q ss_pred             ------CcCeEEEec-cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEe
Q 048594           89 ------DEGYLKREH-CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKAT  161 (483)
Q Consensus        89 ------~~~~lv~E~-~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~  161 (483)
                            ...|+|+|+ +.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++  ..++.+||+
T Consensus       105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~~kl~  182 (312)
T 2iwi_A          105 DWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID--LRRGCAKLI  182 (312)
T ss_dssp             EEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEE--TTTTEEEEC
T ss_pred             EEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEe--CCCCeEEEE
Confidence                  011899999 78999999999888899999999999999999999999999999999999994  256789999


Q ss_pred             ecccceeccCCceecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC
Q 048594          162 DFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD  240 (483)
Q Consensus       162 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  240 (483)
                      |||.+....... .....|++.|+|||++.+..+ +.++||||||+++|+|++|..||....      .+......++  
T Consensus       183 dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~--  253 (312)
T 2iwi_A          183 DFGSGALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELHFP--  253 (312)
T ss_dssp             CCSSCEECCSSC-BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHTCCCCC--
T ss_pred             EcchhhhcccCc-ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhhhccCCc--
Confidence            999998765433 345678999999999876565 458999999999999999999996532      2233333322  


Q ss_pred             CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       241 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                        ..++..+.++|.+||..||.+|||+.++++||||+
T Consensus       254 --~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~  288 (312)
T 2iwi_A          254 --AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ  288 (312)
T ss_dssp             --TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTC
T ss_pred             --ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhc
Confidence              46889999999999999999999999999999998

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=1.4e-38  Score=314.22  Aligned_cols=220  Identities=18%  Similarity=0.239  Sum_probs=183.6

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCE----EEEEEeccCCCCC------------------------------cCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQ----FACKSISKTSKSD------------------------------EGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----~avK~~~~~~~~~------------------------------~~~l   93 (483)
                      .++|.+.+.||+|+||+||+|.+..++..    +|+|.+.......                              ..|+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL   91 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEE
Confidence            36899999999999999999999988876    7777765432111                              1189


Q ss_pred             EEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |+|||.+++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++......
T Consensus        92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~a~~~~~~  168 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVADLLPPD  168 (325)
T ss_dssp             EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEE---SSSSCEEECSCSGGGGSCCC
T ss_pred             EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEE---CCCCeEEECCCCcccccCcc
Confidence            99999999999999875 579999999999999999999999999999999999999   66788999999999876433


Q ss_pred             c---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          173 K---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       173 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      .   ......|++.|+|||++.+..++.++||||||+++|+|++ |..||.+.........+........   ....+++
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  245 (325)
T 3kex_A          169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQ---PQICTID  245 (325)
T ss_dssp             TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCC---CTTBCTT
T ss_pred             cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCC---CCcCcHH
Confidence            2   2234567889999999988889999999999999999999 9999998887777777665533222   2357788


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      +.++|.+||..||.+|||+.++++|
T Consensus       246 ~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          246 VYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             TTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999999986

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.8e-38  Score=319.18  Aligned_cols=219  Identities=20%  Similarity=0.290  Sum_probs=185.3

Q ss_pred             ccceEEeeeecccCceeEEEEEEC-------CCCCEEEEEEeccCCC--------------------------------C
Q 048594           48 KLHFTIAEELCRGESGRIYLCTEN-------STGLQFACKSISKTSK--------------------------------S   88 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~~avK~~~~~~~--------------------------------~   88 (483)
                      .++|.+.+.||+|+||.||+|.+.       .++..||+|++.....                                .
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            578999999999999999999874       3456899999975421                                1


Q ss_pred             CcCeEEEeccCCCChHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC
Q 048594           89 DEGYLKREHCDGGTLVDRISDRE----------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD  152 (483)
Q Consensus        89 ~~~~lv~E~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~  152 (483)
                      ...|+|||||.||+|.+++....                .+++..+..++.||+.||.|||++||+||||||+|||+   
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEE---
Confidence            11299999999999999998653                48999999999999999999999999999999999999   


Q ss_pred             CCCCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHH
Q 048594          153 DENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLT  228 (483)
Q Consensus       153 ~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~  228 (483)
                      +.++.+||+|||++........   .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+........
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~  316 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK  316 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            6778999999999987654321   223456789999999988889999999999999999999 999999888777777


Q ss_pred             HHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          229 AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       229 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+..+...   .....++.++.++|.+||..||.+|||+.|+++
T Consensus       317 ~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~  357 (370)
T 2psq_A          317 LLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE  357 (370)
T ss_dssp             HHHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            76655322   222468899999999999999999999999987

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.6e-38  Score=305.00  Aligned_cols=219  Identities=19%  Similarity=0.307  Sum_probs=186.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------cCeEEEecc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------EGYLKREHC   98 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~lv~E~~   98 (483)
                      .++|.+.+.||+|+||+||+|.+. ++..||+|++.......                             ..|+|||||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            368999999999999999999987 57789999997654211                             119999999


Q ss_pred             CCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--ee
Q 048594           99 DGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--VY  175 (483)
Q Consensus        99 ~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--~~  175 (483)
                      ++++|.+++... ..+++..+..++.||+.||.|||++|++||||||+||++   +.++.+||+|||.+.......  ..
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~  164 (269)
T 4hcu_A           88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSS  164 (269)
T ss_dssp             TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CGGGCEEECCTTGGGGBCCHHHHST
T ss_pred             CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEE---cCCCCEEeccccccccccccccccc
Confidence            999999999654 569999999999999999999999999999999999999   566789999999997654322  12


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....+++.|+|||++.+..++.++|+||+|+++|+|++ |..||.+.........+.......   .....++.+.++|.
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~  241 (269)
T 4hcu_A          165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY---KPRLASTHVYQIMN  241 (269)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---CCTTSCHHHHHHHH
T ss_pred             cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCC---CCCcCCHHHHHHHH
Confidence            23456778999999988889999999999999999999 999999988888888777653322   22457899999999


Q ss_pred             HhCccCCCCCCCHHHHHcC
Q 048594          255 RMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h  273 (483)
                      +||..||.+|||+.++++|
T Consensus       242 ~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          242 HCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHccCCcccCcCHHHHHHH
Confidence            9999999999999999875

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=3e-38  Score=310.07  Aligned_cols=231  Identities=25%  Similarity=0.449  Sum_probs=182.3

Q ss_pred             cccccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------
Q 048594           39 ILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------   89 (483)
Q Consensus        39 ~~~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------   89 (483)
                      +..+......++|.+.+.||+|+||.||+|.++ +++.||||++.......                             
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~   96 (313)
T 3cek_A           18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY   96 (313)
T ss_dssp             --CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred             CCeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence            334445556678999999999999999999986 58999999996543110                             


Q ss_pred             -----cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           90 -----EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        90 -----~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                           ..|+||| +.+++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++.    .+.+||+|||
T Consensus        97 ~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~----~~~~kL~Dfg  171 (313)
T 3cek_A           97 EITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFG  171 (313)
T ss_dssp             EECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCS
T ss_pred             eecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE----CCeEEEeecc
Confidence                 0189999 56779999999988999999999999999999999999999999999999993    3689999999


Q ss_pred             cceeccCCce---ecccccCCcccCccccCC-----------CCCCCcCchHHHHHHHHHHhhCCCCCCCCCh-HHHHHH
Q 048594          165 LAFFFEEGKV---YEEVVGTPLYMAPELLGP-----------CKYGKEIDIWSAGLILYNLLSGAQPFWAESL-YGTLTA  229 (483)
Q Consensus       165 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwslGvil~~ll~g~~pf~~~~~-~~~~~~  229 (483)
                      ++........   .....||+.|+|||++.+           ..++.++||||||+++|+|++|..||..... ......
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  251 (313)
T 3cek_A          172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA  251 (313)
T ss_dssp             SSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH
T ss_pred             ccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Confidence            9987643321   234578999999999865           3678899999999999999999999976543 334444


Q ss_pred             HHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          230 IMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       230 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +........  .....+.++.++|.+||..||.+|||+.++|+||||+
T Consensus       252 ~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~  297 (313)
T 3cek_A          252 IIDPNHEIE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  297 (313)
T ss_dssp             HHCTTSCCC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHhcccccC--CcccchHHHHHHHHHHccCCcccCcCHHHHhcCcccc
Confidence            444333222  1235688999999999999999999999999999998

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=3e-38  Score=305.27  Aligned_cols=220  Identities=20%  Similarity=0.293  Sum_probs=184.5

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEec
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKREH   97 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E~   97 (483)
                      -.++|.+++.||+|+||+||+|.++ ++..||+|++......                             ...|+||||
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  100 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY  100 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence            3468999999999999999999887 6778999999865321                             111999999


Q ss_pred             cCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce--
Q 048594           98 CDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV--  174 (483)
Q Consensus        98 ~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~--  174 (483)
                      |.|++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||.+........  
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~  177 (283)
T 3gen_A          101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTS  177 (283)
T ss_dssp             CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTSCEEECSTTGGGGBCCHHHHS
T ss_pred             cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE---cCCCCEEEcccccccccccccccc
Confidence            999999999977 4679999999999999999999999999999999999999   6778999999999976543221  


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      .....+|+.|+|||++.+..++.++||||+|+++|+|++ |..||...........+........   ....++.+.++|
T Consensus       178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li  254 (283)
T 3gen_A          178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---PHLASEKVYTIM  254 (283)
T ss_dssp             TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CTTCCHHHHHHH
T ss_pred             ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCC---CCcCCHHHHHHH
Confidence            123356778999999988889999999999999999998 9999999888888887776543222   245789999999


Q ss_pred             HHhCccCCCCCCCHHHHHcC
Q 048594          254 RRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .+||..||.+|||+.++++|
T Consensus       255 ~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          255 YSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHccCChhHCcCHHHHHHH
Confidence            99999999999999999875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.4e-38  Score=308.50  Aligned_cols=222  Identities=26%  Similarity=0.374  Sum_probs=175.9

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCeE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGYL   93 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~l   93 (483)
                      .-++|.+.+.||+|+||.||+|.++.+++.||+|++......+                                 ..|+
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV  111 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence            3468999999999999999999999999999999987543211                                 1189


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |+||++|++|.+++...+++++..+..++.||+.||.|||++||+|+||||+||++   +.++.+||+|||++.......
T Consensus       112 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~  188 (309)
T 2h34_A          112 DMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV---SADDFAYLVDFGIASATTDEK  188 (309)
T ss_dssp             EEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSCCC--------
T ss_pred             EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEE---cCCCCEEEecCccCccccccc
Confidence            99999999999999988889999999999999999999999999999999999999   567899999999987664332


Q ss_pred             --eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          174 --VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       174 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                        ......|++.|+|||++.+..++.++||||||+++|+|++|..||.+.........+ ......+....+.+|+++.+
T Consensus       189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~  267 (309)
T 2h34_A          189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHI-NQAIPRPSTVRPGIPVAFDA  267 (309)
T ss_dssp             --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHH-HSCCCCGGGTSTTCCTHHHH
T ss_pred             cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHh-ccCCCCccccCCCCCHHHHH
Confidence              223457899999999998888999999999999999999999999876655433333 33333333344678999999


Q ss_pred             HHHHhCccCCCCCC-CHHHHHc
Q 048594          252 LIRRMLIRDPNNQI-TVAQILK  272 (483)
Q Consensus       252 li~~~L~~dP~~R~-t~~e~L~  272 (483)
                      +|.+||..||.+|| |++++++
T Consensus       268 li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          268 VIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHH
T ss_pred             HHHHhccCCHHHHHHhHHHHHH
Confidence            99999999999999 7887765

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=7.8e-39  Score=313.75  Aligned_cols=216  Identities=24%  Similarity=0.331  Sum_probs=178.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------CCcCeEEEec
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------SDEGYLKREH   97 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------~~~~~lv~E~   97 (483)
                      .++|.+.+.||+|+||+||+|.++.+|+.+|+|.+.....                              ....|+||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            3689999999999999999999999999999998855321                              0111899999


Q ss_pred             cCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee-
Q 048594           98 CDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY-  175 (483)
Q Consensus        98 ~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~-  175 (483)
                      |.|++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||.+......... 
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~  165 (310)
T 3s95_A           89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQP  165 (310)
T ss_dssp             CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---CTTSCEEECCCTTCEECC------
T ss_pred             cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE---CCCCCEEEeecccceecccccccc
Confidence            999999999987 5679999999999999999999999999999999999999   67788999999999876433221 


Q ss_pred             --------------cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHH-----HHHHHHccccC
Q 048594          176 --------------EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG-----TLTAIMSREID  236 (483)
Q Consensus       176 --------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~-----~~~~i~~~~~~  236 (483)
                                    ...+||+.|+|||++.+..++.++||||+|+++|+|++|..||.......     ........   
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---  242 (310)
T 3s95_A          166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR---  242 (310)
T ss_dssp             --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH---
T ss_pred             cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc---
Confidence                          14579999999999999889999999999999999999999986532111     01111111   


Q ss_pred             CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          237 FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       237 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                         ...+.+++.+.++|.+||..||.+|||+.++++
T Consensus       243 ---~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          243 ---YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             ---TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence               112467888999999999999999999999976

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=2.1e-38  Score=306.33  Aligned_cols=222  Identities=19%  Similarity=0.274  Sum_probs=177.0

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCC---CCEEEEEEeccCCC------------------------------CCcC
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENST---GLQFACKSISKTSK------------------------------SDEG   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~avK~~~~~~~------------------------------~~~~   91 (483)
                      +...++|.+.+.||+|+||.||+|.+..+   +..+|+|++.....                              ....
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   90 (281)
T 1mp8_A           11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV   90 (281)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSC
T ss_pred             EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCcc
Confidence            44567999999999999999999998754   45799999865321                              1122


Q ss_pred             eEEEeccCCCChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           92 YLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      |+|||||.+++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++....
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~  167 (281)
T 1mp8_A           91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYME  167 (281)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECC--------
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEEC---CCCCEEECccccccccC
Confidence            89999999999999998654 799999999999999999999999999999999999994   55789999999998765


Q ss_pred             CCce--ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          171 EGKV--YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       171 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      ....  .....+++.|+|||++.+..++.++||||||+++|+|++ |..||.+.........+......   +..+.+++
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~---~~~~~~~~  244 (281)
T 1mp8_A          168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPNCPP  244 (281)
T ss_dssp             -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCTTCCH
T ss_pred             cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCC---CCCCCCCH
Confidence            4332  223456788999999988889999999999999999996 99999988888887777665322   22357899


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+.++|.+||..||.+|||+.++++
T Consensus       245 ~l~~li~~~l~~~p~~Rps~~~l~~  269 (281)
T 1mp8_A          245 TLYSLMTKCWAYDPSRRPRFTELKA  269 (281)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999999999876

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=5.7e-38  Score=301.27  Aligned_cols=220  Identities=25%  Similarity=0.373  Sum_probs=176.9

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------------cCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------------EGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~l   93 (483)
                      .++|.+.+.||+|+||.||+|.+.  |..+|+|++.......                                  ..|+
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL   83 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence            368999999999999999999985  8899999987543211                                  1199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeeCCCCCeEEEeeCC-----CCCcEEEeeccc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG---IMHRDLKPENFIFTTDD-----ENATLKATDFGL  165 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~---ivH~dlkp~NIll~~~~-----~~~~ikl~Dfg~  165 (483)
                      |||||+|++|.+++.. .++++..+..++.||+.||.|||++|   |+||||||+||++....     ..+.+||+|||.
T Consensus        84 v~e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~  162 (271)
T 3dtc_A           84 VMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL  162 (271)
T ss_dssp             EEECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred             EEEcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence            9999999999998864 58999999999999999999999999   89999999999995321     267899999999


Q ss_pred             ceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCC
Q 048594          166 AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       166 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      +........ ....||+.|+|||.+.+..++.++||||+|+++|+|++|..||.+.........+.......+.  ...+
T Consensus       163 ~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~  239 (271)
T 3dtc_A          163 AREWHRTTK-MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI--PSTC  239 (271)
T ss_dssp             --------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCC--CTTC
T ss_pred             ccccccccc-cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCC--Cccc
Confidence            987654332 3457899999999998888999999999999999999999999988877777776665544332  3568


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ++.+.++|.+||..||.+|||+.++++|
T Consensus       240 ~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          240 PEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            8999999999999999999999999874

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.1e-38  Score=316.28  Aligned_cols=223  Identities=20%  Similarity=0.264  Sum_probs=188.2

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCC-------CCEEEEEEeccCCCC-----------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENST-------GLQFACKSISKTSKS-----------------------------   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~~avK~~~~~~~~-----------------------------   88 (483)
                      +...++|.+.+.||+|+||+||+|.+..+       +..||+|++......                             
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            34457999999999999999999997543       357999998764311                             


Q ss_pred             ---CcCeEEEeccCCCChHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEE
Q 048594           89 ---DEGYLKREHCDGGTLVDRISDRE----------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIF  149 (483)
Q Consensus        89 ---~~~~lv~E~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll  149 (483)
                         ...|+|||||.|++|.+++....                .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus       145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll  224 (382)
T 3tt0_A          145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV  224 (382)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEE
Confidence               11299999999999999998653                49999999999999999999999999999999999999


Q ss_pred             eeCCCCCcEEEeecccceeccCCc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHH
Q 048594          150 TTDDENATLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYG  225 (483)
Q Consensus       150 ~~~~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~  225 (483)
                         +.++.+||+|||++.......   ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.....
T Consensus       225 ---~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~  301 (382)
T 3tt0_A          225 ---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE  301 (382)
T ss_dssp             ---CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred             ---cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence               667899999999998764322   2234467889999999988889999999999999999999 999999888887


Q ss_pred             HHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          226 TLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       226 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ....+.......   ....+++++.+||.+||..||.+|||+.+++++
T Consensus       302 ~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          302 LFKLLKEGHRMD---KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHHHHHTTCCCC---CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCC---CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            777776654321   225689999999999999999999999999885

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=2.8e-38  Score=327.62  Aligned_cols=226  Identities=18%  Similarity=0.250  Sum_probs=186.2

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC-----------------------------eEEEe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG-----------------------------YLKRE   96 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------------------~lv~E   96 (483)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||||++.........                             |||||
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            4668999999999999999999999999999999998765432211                             89999


Q ss_pred             ccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           97 HCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        97 ~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      || |++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+...+..+.+||+|||++..+..... 
T Consensus        84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~  162 (483)
T 3sv0_A           84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH  162 (483)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence            99 8899999985 46799999999999999999999999999999999999996444677899999999987654322 


Q ss_pred             -------ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh---HHHHHHHHccccCCCCC-CCC
Q 048594          175 -------YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL---YGTLTAIMSREIDFKSD-PWP  243 (483)
Q Consensus       175 -------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~---~~~~~~i~~~~~~~~~~-~~~  243 (483)
                             .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+...   ...+..+.......... ...
T Consensus       163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  242 (483)
T 3sv0_A          163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCR  242 (483)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHT
T ss_pred             cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhc
Confidence                   1256799999999999998999999999999999999999999977443   33344433332211111 114


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .++.++.+||.+||..+|.+||++.++++
T Consensus       243 ~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          243 GYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             TSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             CCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            67899999999999999999999998765

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.2e-38  Score=313.09  Aligned_cols=230  Identities=21%  Similarity=0.276  Sum_probs=188.0

Q ss_pred             cccccceEEeeeecccCceeEEEEE-----ECCCCCEEEEEEeccCCC-------------------------------C
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCT-----ENSTGLQFACKSISKTSK-------------------------------S   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~~avK~~~~~~~-------------------------------~   88 (483)
                      +...++|.+.+.||+|+||.||+|.     +..++..||||++.....                               .
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS  105 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence            3456789999999999999999999     567889999999864321                               1


Q ss_pred             CcCeEEEeccCCCChHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEe
Q 048594           89 DEGYLKREHCDGGTLVDRISDR-------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKAT  161 (483)
Q Consensus        89 ~~~~lv~E~~~g~~L~~~l~~~-------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~  161 (483)
                      ...|+|||||+|++|.+++...       ..+++..+..++.||+.||.|||++||+||||||+||++..++....+||+
T Consensus       106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEEC
Confidence            1229999999999999999875       348999999999999999999999999999999999999655456679999


Q ss_pred             ecccceeccCCc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCC
Q 048594          162 DFGLAFFFEEGK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDF  237 (483)
Q Consensus       162 Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~  237 (483)
                      |||.+.......   ......|++.|+|||++.+..++.++||||||+++|+|++ |..||...........+...... 
T Consensus       186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~-  264 (327)
T 2yfx_A          186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM-  264 (327)
T ss_dssp             CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC-
T ss_pred             ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCC-
Confidence            999987654322   1223467889999999988889999999999999999998 99999988887777777665432 


Q ss_pred             CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          238 KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       238 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                        .....+++.+.++|.+||..||.+|||+.++++|.|+.
T Consensus       265 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          265 --DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence              22356889999999999999999999999999998764

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.7e-38  Score=312.12  Aligned_cols=224  Identities=19%  Similarity=0.261  Sum_probs=183.9

Q ss_pred             cccceEEeeeecccCceeEEEEEE-----CCCCCEEEEEEeccCCCC--------------------------------C
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTE-----NSTGLQFACKSISKTSKS--------------------------------D   89 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~~avK~~~~~~~~--------------------------------~   89 (483)
                      -.++|.+.+.||+|+||.||+|.+     ..++..||+|++......                                .
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            357899999999999999999997     345678999999754311                                1


Q ss_pred             cCeEEEeccCCCChHHHHhcCC-----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCe
Q 048594           90 EGYLKREHCDGGTLVDRISDRE-----------------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPEN  146 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~-----------------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~N  146 (483)
                      ..|+|||||+|++|.+++....                       .+++..+..++.||+.||.|||++||+||||||+|
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N  202 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN  202 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhh
Confidence            1199999999999999997653                       37999999999999999999999999999999999


Q ss_pred             EEEeeCCCCCcEEEeecccceeccCCc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCC
Q 048594          147 FIFTTDDENATLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAES  222 (483)
Q Consensus       147 Ill~~~~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~  222 (483)
                      |++   +.++.+||+|||++.......   ......||+.|+|||++.+..++.++||||||+++|+|++ |..||.+..
T Consensus       203 Ill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          203 VLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             EEE---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             EEE---cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            999   567799999999998664332   1233467889999999988889999999999999999998 999998876


Q ss_pred             hHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCc
Q 048594          223 LYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW  275 (483)
Q Consensus       223 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~  275 (483)
                      .......+........  ....+++++.++|.+||..||.+|||+.++++|..
T Consensus       280 ~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~  330 (344)
T 1rjb_A          280 VDANFYKLIQNGFKMD--QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  330 (344)
T ss_dssp             CSHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence            5555555444433322  23467899999999999999999999999998643

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-38  Score=314.07  Aligned_cols=223  Identities=19%  Similarity=0.248  Sum_probs=188.5

Q ss_pred             cccccceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCC-------------------------------C
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSK-------------------------------S   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~-------------------------------~   88 (483)
                      +...++|.+.+.||+|+||.||+|.++     .+++.||+|++.....                               .
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  122 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG  122 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence            344679999999999999999999997     4568999999976431                               1


Q ss_pred             CcCeEEEeccCCCChHHHHhcC------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCC
Q 048594           89 DEGYLKREHCDGGTLVDRISDR------------------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKP  144 (483)
Q Consensus        89 ~~~~lv~E~~~g~~L~~~l~~~------------------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp  144 (483)
                      ...|+|||||+|++|.+++...                        .++++..+..++.||+.||.|||++||+||||||
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp  202 (343)
T 1luf_A          123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT  202 (343)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCc
Confidence            1229999999999999999763                        5799999999999999999999999999999999


Q ss_pred             CeEEEeeCCCCCcEEEeecccceeccCCc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCC
Q 048594          145 ENFIFTTDDENATLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWA  220 (483)
Q Consensus       145 ~NIll~~~~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~  220 (483)
                      +||++   +.++.+||+|||++.......   ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+
T Consensus       203 ~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  279 (343)
T 1luf_A          203 RNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  279 (343)
T ss_dssp             GGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             ceEEE---CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence            99999   567799999999997654322   1234567889999999988889999999999999999999 9999999


Q ss_pred             CChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          221 ESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       221 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .........+..+....   ....+++.+.++|.+||..||.+|||+.+++++
T Consensus       280 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          280 MAHEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             SCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CChHHHHHHHhCCCcCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            88888888777664432   224688999999999999999999999999873

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=8.2e-39  Score=321.02  Aligned_cols=225  Identities=14%  Similarity=0.178  Sum_probs=178.0

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCC-----CCEEEEEEeccCCC----------------------------C----
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENST-----GLQFACKSISKTSK----------------------------S----   88 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~avK~~~~~~~----------------------------~----   88 (483)
                      ...++|.+.+.||+|+||+||+|.++.+     ++.||||++.....                            .    
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv  111 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP  111 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence            3456899999999999999999999765     58899999765420                            0    


Q ss_pred             -------------CcCeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCC
Q 048594           89 -------------DEGYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE  154 (483)
Q Consensus        89 -------------~~~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~  154 (483)
                                   ...|+||||| |++|.+++... .++++..+..++.||+.||.|||++||+||||||+|||++. +.
T Consensus       112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~-~~  189 (364)
T 3op5_A          112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KN  189 (364)
T ss_dssp             CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES-SC
T ss_pred             eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec-CC
Confidence                         1138999999 99999999876 68999999999999999999999999999999999999953 15


Q ss_pred             CCcEEEeecccceeccCCce--------ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHH
Q 048594          155 NATLKATDFGLAFFFEEGKV--------YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGT  226 (483)
Q Consensus       155 ~~~ikl~Dfg~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~  226 (483)
                      .+.+||+|||++..+.....        ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+......
T Consensus       190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~  269 (364)
T 3op5_A          190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK  269 (364)
T ss_dssp             TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred             CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence            67899999999987643221        1234599999999999998899999999999999999999999986432222


Q ss_pred             HHHHHccc-----cCCCC--CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          227 LTAIMSRE-----IDFKS--DPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       227 ~~~i~~~~-----~~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ........     ..+..  .+...+|+++.++|..||..+|.+||++.++++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          270 YVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            11111100     00000  011467899999999999999999999998876

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=3.7e-38  Score=309.05  Aligned_cols=222  Identities=19%  Similarity=0.242  Sum_probs=186.7

Q ss_pred             ccccceEEeeeecccCceeEEEEEE-----CCCCCEEEEEEeccCCC-------------------------------CC
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTE-----NSTGLQFACKSISKTSK-------------------------------SD   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~~avK~~~~~~~-------------------------------~~   89 (483)
                      -..++|.+.+.||+|+||.||+|.+     +.++..||+|++.....                               ..
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   99 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG   99 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence            3357899999999999999999998     34568999999975431                               11


Q ss_pred             cCeEEEeccCCCChHHHHhcCCC------------------------CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCC
Q 048594           90 EGYLKREHCDGGTLVDRISDRER------------------------YTERAAASVFRSVVNALHACHSNGIMHRDLKPE  145 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~------------------------l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~  145 (483)
                      ..|+|||||.|++|.+++.....                        +++..+..++.||+.||.|||++||+||||||+
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~  179 (314)
T 2ivs_A          100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAAR  179 (314)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchh
Confidence            12999999999999999987543                        899999999999999999999999999999999


Q ss_pred             eEEEeeCCCCCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCC
Q 048594          146 NFIFTTDDENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAE  221 (483)
Q Consensus       146 NIll~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~  221 (483)
                      ||++   +.++.+||+|||++........   .....+++.|+|||++.+..++.++||||||+++|+|++ |..||.+.
T Consensus       180 NIli---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  256 (314)
T 2ivs_A          180 NILV---AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI  256 (314)
T ss_dssp             GEEE---ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             eEEE---cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999   5667899999999987654322   123456788999999988788999999999999999999 99999988


Q ss_pred             ChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          222 SLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       222 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ........+......   .....+++.+.++|.+||..||.+|||+.+++++
T Consensus       257 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          257 PPERLFNLLKTGHRM---ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             CGGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHhhcCCcC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            877777776655322   2235789999999999999999999999999874

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=2.9e-38  Score=305.11  Aligned_cols=222  Identities=25%  Similarity=0.441  Sum_probs=188.2

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-------------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-------------------------------------   87 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------------------------------------   87 (483)
                      ..+..+|.+.+.||+|+||.||+|.++.+|+.||+|.+.....                                     
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B            7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred             chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence            3567789999999999999999999999999999999875431                                     


Q ss_pred             -----CCcCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEE
Q 048594           88 -----SDEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA  160 (483)
Q Consensus        88 -----~~~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl  160 (483)
                           ....|+|||||++++|.+++...  ..+++..+..++.||+.||.|||++||+|+||||+||++.   .++.+||
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl  163 (284)
T 2a19_B           87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV---DTKQVKI  163 (284)
T ss_dssp             --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEE
T ss_pred             ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEc---CCCCEEE
Confidence                 00127999999999999999754  6799999999999999999999999999999999999994   5678999


Q ss_pred             eecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC
Q 048594          161 TDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD  240 (483)
Q Consensus       161 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  240 (483)
                      +|||.+.............|++.|+|||++.+..++.++||||||+++|+|++|..||...  ......+.....     
T Consensus       164 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~~~~-----  236 (284)
T 2a19_B          164 GDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRDGII-----  236 (284)
T ss_dssp             CCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHTTCC-----
T ss_pred             CcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhcccc-----
Confidence            9999998876655555667999999999998888999999999999999999999997432  222333333221     


Q ss_pred             CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       241 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                       .+.++..+.++|.+||..||.+|||+.++++|.+.-
T Consensus       237 -~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          237 -SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             -CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence             245789999999999999999999999999998765

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1e-38  Score=314.65  Aligned_cols=227  Identities=20%  Similarity=0.268  Sum_probs=180.4

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeE
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYL   93 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~l   93 (483)
                      .+...++|.+.+.||+|+||+||+|.++ +|+.||+|.+......                              ...|+
T Consensus        34 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  112 (321)
T 2qkw_B           34 LEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL  112 (321)
T ss_dssp             CCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred             HHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence            3456789999999999999999999965 7899999998754311                              11299


Q ss_pred             EEeccCCCChHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           94 KREHCDGGTLVDRISDRE----RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~----~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      |||||+|++|.+++....    .+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++...
T Consensus       113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~  189 (321)
T 2qkw_B          113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGISKKG  189 (321)
T ss_dssp             EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE---CTTCCEEECCCTTCEEC
T ss_pred             EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE---CCCCCEEEeeccccccc
Confidence            999999999999997543    58999999999999999999999999999999999999   67789999999999865


Q ss_pred             cCCc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHH-------HHHHccccC---
Q 048594          170 EEGK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTL-------TAIMSREID---  236 (483)
Q Consensus       170 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~-------~~i~~~~~~---  236 (483)
                      ....   ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.+.......       .........   
T Consensus       190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (321)
T 2qkw_B          190 TELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV  269 (321)
T ss_dssp             SSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSS
T ss_pred             ccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhc
Confidence            4221   223346899999999998888999999999999999999999999765432211       111111111   


Q ss_pred             ---CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCC
Q 048594          237 ---FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHP  274 (483)
Q Consensus       237 ---~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~  274 (483)
                         ......+..+..+.+++.+||..||.+|||+.++++|.
T Consensus       270 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             SSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             ChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence               01111123456789999999999999999999999864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=3.6e-38  Score=311.46  Aligned_cols=219  Identities=22%  Similarity=0.280  Sum_probs=183.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEE--EEEEeccCCCCC--------------------------------cCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQF--ACKSISKTSKSD--------------------------------EGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~--avK~~~~~~~~~--------------------------------~~~lv   94 (483)
                      ++|.+.+.||+|+||.||+|.++.+|..+  |+|.+.......                                ..|+|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            68999999999999999999999998866  999987532111                                01899


Q ss_pred             EeccCCCChHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           95 REHCDGGTLVDRISDRE----------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                      ||||++++|.+++....                ++++..++.++.||+.||.|||++||+||||||+||++   +.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEE---cCCCeE
Confidence            99999999999997654                79999999999999999999999999999999999999   567799


Q ss_pred             EEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCC
Q 048594          159 KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDF  237 (483)
Q Consensus       159 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~  237 (483)
                      ||+|||++.............+++.|+|||++.+..++.++||||||+++|+|++ |..||.+.........+.....  
T Consensus       182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~--  259 (327)
T 1fvr_A          182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR--  259 (327)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC--
T ss_pred             EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCC--
Confidence            9999999875433222334467889999999988788999999999999999998 9999998887777776655422  


Q ss_pred             CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          238 KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       238 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                       ......+++.+.++|.+||..||.+|||+.+++++
T Consensus       260 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          260 -LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             -CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence             22235789999999999999999999999999885

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=4.6e-38  Score=317.12  Aligned_cols=219  Identities=21%  Similarity=0.297  Sum_probs=184.8

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-------------------------------CCcCeEEEe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-------------------------------SDEGYLKRE   96 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------------------------------~~~~~lv~E   96 (483)
                      .++|.+.+.||+|+||.||+|.++.+++.||||++.....                               ....|+|||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            4789999999999999999999999999999999875421                               111299999


Q ss_pred             ccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           97 HCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      ||+|++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||+   +.++.+||+|||++.........
T Consensus       193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~---~~~~~~kl~DfG~s~~~~~~~~~  269 (377)
T 3cbl_A          193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEADGVYA  269 (377)
T ss_dssp             CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGGGCEECTTSEEE
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEE---cCCCcEEECcCCCceecCCCcee
Confidence            99999999999765 469999999999999999999999999999999999999   67789999999999875433221


Q ss_pred             c---ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          176 E---EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       176 ~---~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      .   ...+++.|+|||++....++.++|||||||++|+|++ |..||.+.........+..+.. .  +....+|+++.+
T Consensus       270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~  346 (377)
T 3cbl_A          270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR-L--PCPELCPDAVFR  346 (377)
T ss_dssp             CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCC-C--CCCTTCCHHHHH
T ss_pred             ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-C--CCCCCCCHHHHH
Confidence            1   1234677999999988788999999999999999998 9999998887777666655432 1  122457899999


Q ss_pred             HHHHhCccCCCCCCCHHHHHc
Q 048594          252 LIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +|.+||+.||.+|||+.++++
T Consensus       347 li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          347 LMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCCchhCcCHHHHHH
Confidence            999999999999999999875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=4.8e-38  Score=310.76  Aligned_cols=220  Identities=18%  Similarity=0.249  Sum_probs=178.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEE----EEEEeccCCCC------------------------------CcCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQF----ACKSISKTSKS------------------------------DEGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~----avK~~~~~~~~------------------------------~~~~l   93 (483)
                      .++|.+.+.||+|+||+||+|.+..+|+.+    |+|.+......                              ...++
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   93 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL   93 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEE
Confidence            468999999999999999999998887754    77776543211                              11189


Q ss_pred             EEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |+||+.+++|.+++.. ...+++..+..++.||+.||.|||+++|+||||||+|||+.   ..+.+||+|||++......
T Consensus        94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~  170 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCTTHHHHHTTT
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEEC---CCCCEEEccCcceeEccCC
Confidence            9999999999999987 46799999999999999999999999999999999999994   5678999999999876543


Q ss_pred             ce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          173 KV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       173 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      ..   .....+|+.|+|||.+.+..++.++|||||||++|+|++ |..||.+.........+......   +..+..+..
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  247 (327)
T 3poz_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL---PQPPICTID  247 (327)
T ss_dssp             CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCTTBCHH
T ss_pred             cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCC---CCCccCCHH
Confidence            22   223456889999999988889999999999999999999 99999988777776666554322   223568899


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      +.+++.+||+.||.+|||+.+++++
T Consensus       248 ~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          248 VYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHHH
Confidence            9999999999999999999999875

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=1.1e-37  Score=304.24  Aligned_cols=213  Identities=33%  Similarity=0.581  Sum_probs=170.3

Q ss_pred             cccccceEEe-eeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------CCcCeE
Q 048594           45 EDIKLHFTIA-EELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------SDEGYL   93 (483)
Q Consensus        45 ~~i~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------~~~~~l   93 (483)
                      ..+.++|.+. +.||+|+||.||+|.++.+|+.||+|++.....                              ....|+
T Consensus        13 ~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l   92 (299)
T 3m2w_A           13 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI   92 (299)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence            4566778887 889999999999999999999999999865320                              111289


Q ss_pred             EEeccCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           94 KREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |||||+|++|.+++....  .+++..+..++.||+.||.|||++||+||||||+||++...+..+.+||+|||++.....
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  172 (299)
T 3m2w_A           93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG  172 (299)
T ss_dssp             EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT
T ss_pred             EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc
Confidence            999999999999998764  699999999999999999999999999999999999996544478899999999865421


Q ss_pred             CceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHc----cccCCCCCCCCCCCH
Q 048594          172 GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS----REIDFKSDPWPTISS  247 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~----~~~~~~~~~~~~~~~  247 (483)
                                           ..++.++||||+||++|+|++|..||.+.........+..    ....++...+..+++
T Consensus       173 ---------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (299)
T 3m2w_A          173 ---------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE  231 (299)
T ss_dssp             ---------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCH
T ss_pred             ---------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCH
Confidence                                 2467789999999999999999999977554332221111    111222222256899


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      ++.+||.+||..||.+|||+.|+|+||||..
T Consensus       232 ~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~  262 (299)
T 3m2w_A          232 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  262 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhcChhhcc
Confidence            9999999999999999999999999999983

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=5.1e-38  Score=305.62  Aligned_cols=221  Identities=18%  Similarity=0.260  Sum_probs=175.7

Q ss_pred             ccccceEEeeeecccCceeEEEEE----ECCCCCEEEEEEeccCCCC--------------------------------C
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCT----ENSTGLQFACKSISKTSKS--------------------------------D   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~~avK~~~~~~~~--------------------------------~   89 (483)
                      -..++|++++.||+|+||+||+|.    +..+++.||||++......                                .
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   86 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR   86 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence            345789999999999999999998    6778999999998764311                                1


Q ss_pred             cCeEEEeccCCCChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           90 EGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      ..|+|||||++++|.+++.... ++++..+..++.||+.||.|||++||+||||||+||+++   ..+.+||+|||++..
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGLTKV  163 (295)
T ss_dssp             SCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCCSCC-
T ss_pred             ceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEc---CCCeEEEccCccccc
Confidence            1289999999999999998754 599999999999999999999999999999999999994   567899999999987


Q ss_pred             ccCCce----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH----------------HHHH
Q 048594          169 FEEGKV----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY----------------GTLT  228 (483)
Q Consensus       169 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~----------------~~~~  228 (483)
                      ......    .....+++.|+|||.+.+..++.++||||+|+++|+|++|..||......                ....
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (295)
T 3ugc_A          164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  243 (295)
T ss_dssp             ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence            643321    22345677899999998888999999999999999999999998543211                1111


Q ss_pred             HHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          229 AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       229 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+... .  ..+....+++++.++|.+||..||.+|||+.++++
T Consensus       244 ~~~~~-~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          244 LLKNN-G--RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHTT-C--CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHhcc-C--cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            12211 1  12223578999999999999999999999999876

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=3.7e-38  Score=307.19  Aligned_cols=222  Identities=23%  Similarity=0.379  Sum_probs=175.7

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcC
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEG   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~   91 (483)
                      ..+.++|.+.+.||+|+||+||+|.+  +|+.||||++......                                 ...
T Consensus         4 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~   81 (301)
T 3q4u_A            4 RTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL   81 (301)
T ss_dssp             CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             ccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence            35678999999999999999999987  5899999998654310                                 001


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeeeCCCCCeEEEeeCCCCCcEEEeec
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACH--------SNGIMHRDLKPENFIFTTDDENATLKATDF  163 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH--------~~~ivH~dlkp~NIll~~~~~~~~ikl~Df  163 (483)
                      |+|||||++++|.+++.. ..+++..+..++.||+.||.|||        +.+|+||||||+|||+   +.++.+||+||
T Consensus        82 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Df  157 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQCCIADL  157 (301)
T ss_dssp             EEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE---CTTSCEEECCC
T ss_pred             EEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE---cCCCCEEEeeC
Confidence            799999999999999954 57999999999999999999999        9999999999999999   67789999999


Q ss_pred             ccceeccCCcee-----cccccCCcccCccccCCC------CCCCcCchHHHHHHHHHHhhC----------CCCCCCCC
Q 048594          164 GLAFFFEEGKVY-----EEVVGTPLYMAPELLGPC------KYGKEIDIWSAGLILYNLLSG----------AQPFWAES  222 (483)
Q Consensus       164 g~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~------~~~~~~DiwslGvil~~ll~g----------~~pf~~~~  222 (483)
                      |++.........     ....||+.|+|||++.+.      .++.++||||+||++|+|++|          ..||....
T Consensus       158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~  237 (301)
T 3q4u_A          158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV  237 (301)
T ss_dssp             TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence            999876543221     234799999999999875      344689999999999999999          88886532


Q ss_pred             ----hHHHHHHHHccccCCCCCCC----CCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          223 ----LYGTLTAIMSREIDFKSDPW----PTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       223 ----~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                          ...............+..+.    ...++++.+||.+||+.||.+|||+.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          238 PNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             CSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                22233332222111111110    124578999999999999999999999986

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.5e-38  Score=322.78  Aligned_cols=228  Identities=23%  Similarity=0.381  Sum_probs=184.1

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cC
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EG   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~   91 (483)
                      ..+.++|.+.+.||+|+||+||+|.++.+|+.||||++.......                                 ..
T Consensus         5 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~   84 (396)
T 4eut_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK   84 (396)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred             CCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence            345678999999999999999999999999999999987532111                                 12


Q ss_pred             eEEEeccCCCChHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee-CCCCCcEEEeecccce
Q 048594           92 YLKREHCDGGTLVDRISDRE---RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT-DDENATLKATDFGLAF  167 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~---~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~-~~~~~~ikl~Dfg~a~  167 (483)
                      |+|||||+|++|.+++....   .+++..+..++.||+.||.|||++||+||||||+|||+.. ++..+.+||+|||++.
T Consensus        85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A           85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            89999999999999997643   3999999999999999999999999999999999999843 2455679999999998


Q ss_pred             eccCCceecccccCCcccCccccCC--------CCCCCcCchHHHHHHHHHHhhCCCCCCC----CChHHHHHHHHcccc
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLGP--------CKYGKEIDIWSAGLILYNLLSGAQPFWA----ESLYGTLTAIMSREI  235 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslGvil~~ll~g~~pf~~----~~~~~~~~~i~~~~~  235 (483)
                      ............||+.|+|||++.+        ..++.++|||||||++|+|++|..||..    ......+..+..+..
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p  244 (396)
T 4eut_A          165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP  244 (396)
T ss_dssp             ECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred             EccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence            8766655566789999999998854        4567899999999999999999999964    233455555554432


Q ss_pred             CCC-----------------CCC----CCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          236 DFK-----------------SDP----WPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       236 ~~~-----------------~~~----~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ...                 .+.    ...++..+.++|.+||++||.+|||+.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence            100                 000    1224567899999999999999999999865

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=2.4e-37  Score=303.10  Aligned_cols=222  Identities=28%  Similarity=0.463  Sum_probs=172.4

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~   92 (483)
                      ....+|.+.+.||+|+||.||+|.+..+|+.||+|++.......                                 ..|
T Consensus        29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~  108 (310)
T 2wqm_A           29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN  108 (310)
T ss_dssp             SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEE
Confidence            34568999999999999999999999999999999997533111                                 118


Q ss_pred             EEEeccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           93 LKREHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      +||||+.+++|.+++..    ...+++..+..++.||+.||.|||++|++|+||||+||++   +.++.++|+|||++..
T Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~---~~~~~~kl~Dfg~~~~  185 (310)
T 2wqm_A          109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRF  185 (310)
T ss_dssp             EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCC-----
T ss_pred             EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE---cCCCCEEEEeccceee
Confidence            99999999999999864    4679999999999999999999999999999999999999   6778999999999876


Q ss_pred             ccCCc-eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC--hHHHHHHHHccccCCCCCCCCCC
Q 048594          169 FEEGK-VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES--LYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       169 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      ..... ......|++.|+|||++.+..++.++||||||+++|+|++|..||.+..  .......+....  ++......+
T Consensus       186 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  263 (310)
T 2wqm_A          186 FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPLPSDHY  263 (310)
T ss_dssp             -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC--SCCCCTTTS
T ss_pred             ecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc--CCCCccccc
Confidence            54322 2234578999999999998889999999999999999999999997653  233444444332  233334578


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ++++.++|.+||..||.+|||+.++++
T Consensus       264 ~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          264 SEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            999999999999999999999999986

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=8.3e-38  Score=302.84  Aligned_cols=222  Identities=20%  Similarity=0.304  Sum_probs=188.9

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEE
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKR   95 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~   95 (483)
                      +...++|++.+.||+|+||+||+|.++.++..+|+|++......                             ...|+||
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   88 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   88 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence            34567899999999999999999999999999999999764311                             1129999


Q ss_pred             eccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           96 EHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |||.|++|.+++...  ..+++..+..++.||+.||.|||++||+|+||||+||++   +.++.++|+|||.+.......
T Consensus        89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~~  165 (288)
T 3kfa_A           89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDT  165 (288)
T ss_dssp             ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEE---CGGGCEEECCCCGGGTSCSSS
T ss_pred             EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEE---cCCCCEEEccCccceeccCCc
Confidence            999999999999864  459999999999999999999999999999999999999   567789999999998765332


Q ss_pred             --eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          174 --VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       174 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                        ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||.+.........+.....   ......+++.+.
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~  242 (288)
T 3kfa_A          166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR---MERPEGCPEKVY  242 (288)
T ss_dssp             SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC---CCCCTTCCHHHH
T ss_pred             cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCC---CCCCCCCCHHHH
Confidence              2233456888999999988889999999999999999999 9999988877777666655422   222357899999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHc
Q 048594          251 DLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +||.+||..||.+|||+.++++
T Consensus       243 ~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          243 ELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCChhhCcCHHHHHH
Confidence            9999999999999999999976

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.1e-37  Score=306.98  Aligned_cols=223  Identities=19%  Similarity=0.254  Sum_probs=188.6

Q ss_pred             cccccceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCC-------------------------------C
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSK-------------------------------S   88 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~-------------------------------~   88 (483)
                      +...++|.+.+.||+|+||.||+|.++     .+++.||+|.+.....                               .
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  100 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG  100 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence            455678999999999999999999887     4678999999875431                               1


Q ss_pred             CcCeEEEeccCCCChHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           89 DEGYLKREHCDGGTLVDRISDR----------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        89 ~~~~lv~E~~~g~~L~~~l~~~----------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                      ...|+|||||.|++|.+++...          .++++..+..++.||+.||.|||++||+||||||+||++   +.++.+
T Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli---~~~~~~  177 (322)
T 1p4o_A          101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV  177 (322)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE---CTTCCE
T ss_pred             CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEE---cCCCeE
Confidence            1129999999999999999752          457999999999999999999999999999999999999   667899


Q ss_pred             EEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccc
Q 048594          159 KATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSRE  234 (483)
Q Consensus       159 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~  234 (483)
                      ||+|||++........   .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+.........+....
T Consensus       178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  257 (322)
T 1p4o_A          178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG  257 (322)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC
T ss_pred             EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCC
Confidence            9999999986543322   123456889999999988889999999999999999999 899999888888777777654


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          235 IDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       235 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ...   ....++..+.++|.+||..||.+|||+.++++|
T Consensus       258 ~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          258 LLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            322   235788999999999999999999999999986

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=1.7e-38  Score=316.29  Aligned_cols=225  Identities=13%  Similarity=0.161  Sum_probs=174.5

Q ss_pred             ccccceEEeeeecccCceeEEEEEECC---CCCEEEEEEeccCCC-----------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENS---TGLQFACKSISKTSK-----------------------------------   87 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~-----------------------------------   87 (483)
                      ...++|.+.+.||+|+||+||+|.++.   ++..+|+|++.....                                   
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~  113 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF  113 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence            345789999999999999999999987   889999999876421                                   


Q ss_pred             ----------CCcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCc
Q 048594           88 ----------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENAT  157 (483)
Q Consensus        88 ----------~~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~  157 (483)
                                ....|+||||| |++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+..+ ..+.
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-~~~~  191 (345)
T 2v62_A          114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK-NPDQ  191 (345)
T ss_dssp             EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESS-STTS
T ss_pred             ecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccC-CCCc
Confidence                      12239999999 99999999888899999999999999999999999999999999999999542 2238


Q ss_pred             EEEeecccceeccCCc--------eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCC--ChHHHH
Q 048594          158 LKATDFGLAFFFEEGK--------VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE--SLYGTL  227 (483)
Q Consensus       158 ikl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~--~~~~~~  227 (483)
                      +||+|||++..+....        ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.  ......
T Consensus       192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~  271 (345)
T 2v62_A          192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ  271 (345)
T ss_dssp             EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred             EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence            9999999998764321        113457999999999999888999999999999999999999999653  222222


Q ss_pred             HHHHccccCCCC-----CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          228 TAIMSREIDFKS-----DPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       228 ~~i~~~~~~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ..........+.     .+...+++++.++|.+||..||.+|||+.++++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          272 TAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            111111111110     011268899999999999999999999999887

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=1e-37  Score=305.70  Aligned_cols=223  Identities=21%  Similarity=0.308  Sum_probs=184.8

Q ss_pred             ccccceEEeeeecccCceeEEEEEE-----CCCCCEEEEEEeccCCC--------------------------------C
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTE-----NSTGLQFACKSISKTSK--------------------------------S   88 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~~avK~~~~~~~--------------------------------~   88 (483)
                      -..++|.+.+.||+|+||.||+|.+     ..+++.||+|++.....                                .
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   99 (313)
T 1t46_A           20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG   99 (313)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence            3457999999999999999999985     56788999999975431                                1


Q ss_pred             CcCeEEEeccCCCChHHHHhcCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEe
Q 048594           89 DEGYLKREHCDGGTLVDRISDRE------------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFT  150 (483)
Q Consensus        89 ~~~~lv~E~~~g~~L~~~l~~~~------------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~  150 (483)
                      ...|+|||||++++|.+++....                  ++++..+..++.||+.||.|||++||+||||||+||++ 
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~-  178 (313)
T 1t46_A          100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL-  178 (313)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-
T ss_pred             CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEE-
Confidence            11299999999999999998654                  48999999999999999999999999999999999999 


Q ss_pred             eCCCCCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHH
Q 048594          151 TDDENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGT  226 (483)
Q Consensus       151 ~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~  226 (483)
                        +..+.+||+|||.+........   .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+......
T Consensus       179 --~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  256 (313)
T 1t46_A          179 --THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK  256 (313)
T ss_dssp             --ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred             --cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence              5677999999999987654322   223456788999999988889999999999999999999 9999988765554


Q ss_pred             HHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          227 LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       227 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ...+........  ....+++.+.++|.+||..||.+|||+.+++++
T Consensus       257 ~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          257 FYKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HHHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhccCCCCC--CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            444444333222  235689999999999999999999999999873

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=1.8e-37  Score=304.41  Aligned_cols=221  Identities=15%  Similarity=0.199  Sum_probs=177.6

Q ss_pred             cccceEEeeeecccCceeEEEEEECC---CCCEEEEEEeccCCCCC----------------------------------
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENS---TGLQFACKSISKTSKSD----------------------------------   89 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~----------------------------------   89 (483)
                      -.++|.+.+.||+|+||.||+|.+..   ++..||+|++.......                                  
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence            35789999999999999999998765   55689999987542110                                  


Q ss_pred             ---cCeEEEeccCCCChHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEE
Q 048594           90 ---EGYLKREHCDGGTLVDRIS------DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKA  160 (483)
Q Consensus        90 ---~~~lv~E~~~g~~L~~~l~------~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl  160 (483)
                         ..|+|+|||.+++|.+++.      ....+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||
T Consensus       112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli---~~~~~~kl  188 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML---RDDMTVCV  188 (313)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEE---CTTSCEEE
T ss_pred             CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCcEEE
Confidence               1189999999999999984      34579999999999999999999999999999999999999   67789999


Q ss_pred             eecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccC
Q 048594          161 TDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREID  236 (483)
Q Consensus       161 ~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~  236 (483)
                      +|||++........   .....+++.|+|||.+.+..++.++||||||+++|+|++ |..||.+.........+......
T Consensus       189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~  268 (313)
T 3brb_A          189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRL  268 (313)
T ss_dssp             CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC
T ss_pred             eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCC
Confidence            99999987643321   223457888999999988889999999999999999999 99999988887777777665322


Q ss_pred             CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          237 FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       237 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                         ...+.+++.+.++|.+||..||.+|||+.+++++
T Consensus       269 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          269 ---KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             ---CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ---CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence               2235688999999999999999999999999873

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.5e-37  Score=301.69  Aligned_cols=227  Identities=22%  Similarity=0.399  Sum_probs=172.5

Q ss_pred             ccccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------
Q 048594           40 LGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------   88 (483)
Q Consensus        40 ~~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------   88 (483)
                      .....+-..++|++.+.||+|+||+||+|.++.   .+|+|++......                               
T Consensus        15 ~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   91 (289)
T 3og7_A           15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA   91 (289)
T ss_dssp             ---CCBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             CCCCCccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC
Confidence            344455667799999999999999999998653   5999998754321                               


Q ss_pred             CcCeEEEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           89 DEGYLKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        89 ~~~~lv~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                      ...++|||||.|++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~  168 (289)
T 3og7_A           92 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLAT  168 (289)
T ss_dssp             SSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTTEEEECCCC---
T ss_pred             CccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE---CCCCCEEEccceecc
Confidence            112999999999999999964 3579999999999999999999999999999999999999   566799999999997


Q ss_pred             eccC---CceecccccCCcccCccccC---CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHH-HHHHccccCCC-C
Q 048594          168 FFEE---GKVYEEVVGTPLYMAPELLG---PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTL-TAIMSREIDFK-S  239 (483)
Q Consensus       168 ~~~~---~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~-~~i~~~~~~~~-~  239 (483)
                      ....   ........||+.|+|||++.   +..++.++||||||+++|+|++|..||.+....... ..+........ .
T Consensus       169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  248 (289)
T 3og7_A          169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS  248 (289)
T ss_dssp             ---------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTT
T ss_pred             ccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchh
Confidence            6542   22233457899999999986   556788999999999999999999999876554443 44444333222 1


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .....+|+.+.+||.+||..||.+|||+.++++
T Consensus       249 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            223568899999999999999999999999986

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=6.9e-38  Score=321.64  Aligned_cols=229  Identities=28%  Similarity=0.413  Sum_probs=174.2

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------CCcCeEEEe
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------SDEGYLKRE   96 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------~~~~~lv~E   96 (483)
                      +.+.+.|.+.+.||+|+||+||.+ ...+|+.||||++.....                            ....|+|||
T Consensus        11 ~~l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E   89 (434)
T 2rio_A           11 QSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE   89 (434)
T ss_dssp             CSCSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhhhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence            456778889999999999999875 455799999999865420                            011199999


Q ss_pred             ccCCCChHHHHhcCCCC-------CHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC----------CCCCcEE
Q 048594           97 HCDGGTLVDRISDRERY-------TERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD----------DENATLK  159 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l-------~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~----------~~~~~ik  159 (483)
                      ||.| +|.+++......       ++..+..++.||+.||.|||++||+||||||+|||++..          +....+|
T Consensus        90 ~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k  168 (434)
T 2rio_A           90 LCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL  168 (434)
T ss_dssp             CCSE-EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred             cCCC-CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence            9965 999999876433       233457899999999999999999999999999999643          2456899


Q ss_pred             EeecccceeccCCce-----ecccccCCcccCccccCC-------CCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHH
Q 048594          160 ATDFGLAFFFEEGKV-----YEEVVGTPLYMAPELLGP-------CKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGT  226 (483)
Q Consensus       160 l~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~  226 (483)
                      |+|||++........     ....+||+.|+|||++.+       ..++.++|||||||++|+|++ |..||....... 
T Consensus       169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-  247 (434)
T 2rio_A          169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-  247 (434)
T ss_dssp             ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-
T ss_pred             EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-
Confidence            999999987754321     234579999999999865       568899999999999999999 999997654333 


Q ss_pred             HHHHHccccCCCCCC---CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          227 LTAIMSREIDFKSDP---WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       227 ~~~i~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                       ..+.......+...   .+.+++++.+||.+||+.||.+|||+.++++||||.
T Consensus       248 -~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~  300 (434)
T 2rio_A          248 -SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW  300 (434)
T ss_dssp             -HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             -HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence             34444443332221   123568899999999999999999999999999997

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=5.9e-38  Score=307.86  Aligned_cols=222  Identities=19%  Similarity=0.263  Sum_probs=183.1

Q ss_pred             ccccceEEeeeecccCceeEEEEEE-----CCCCCEEEEEEeccCCCC--------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTE-----NSTGLQFACKSISKTSKS--------------------------------   88 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~~avK~~~~~~~~--------------------------------   88 (483)
                      -..++|.+.+.||+|+||+||+|.+     ..+++.||+|++......                                
T Consensus        24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  103 (316)
T 2xir_A           24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP  103 (316)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence            3457899999999999999999985     457789999998754210                                


Q ss_pred             -CcCeEEEeccCCCChHHHHhcCCC----------------CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee
Q 048594           89 -DEGYLKREHCDGGTLVDRISDRER----------------YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT  151 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~~~----------------l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~  151 (483)
                       ...|+|||||.|++|.+++.....                +++..+..++.||+.||.|||++||+||||||+||++  
T Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~--  181 (316)
T 2xir_A          104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--  181 (316)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE--
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE--
Confidence             113999999999999999987654                8999999999999999999999999999999999999  


Q ss_pred             CCCCCcEEEeecccceeccCCc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHH-
Q 048594          152 DDENATLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGT-  226 (483)
Q Consensus       152 ~~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~-  226 (483)
                       +..+.+||+|||.+.......   ......||+.|+|||++.+..++.++||||||+++|+|++ |..||.+...... 
T Consensus       182 -~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~  260 (316)
T 2xir_A          182 -SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF  260 (316)
T ss_dssp             -CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred             -CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHH
Confidence             567789999999998664332   2234567889999999988889999999999999999998 9999987654433 


Q ss_pred             HHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          227 LTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       227 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ...+..... .  .....+++.+.++|.+||..||.+|||+.++++|
T Consensus       261 ~~~~~~~~~-~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          261 CRRLKEGTR-M--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHHHHHTCC-C--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhccCcc-C--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            333333321 1  1224578999999999999999999999999885

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2e-37  Score=296.72  Aligned_cols=219  Identities=19%  Similarity=0.307  Sum_probs=186.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEecc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKREHC   98 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E~~   98 (483)
                      .++|.+.+.||+|+||.||+|.+. ++..||+|++......                             ...|+||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            368999999999999999999987 6788999999865421                             1129999999


Q ss_pred             CCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--ee
Q 048594           99 DGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--VY  175 (483)
Q Consensus        99 ~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--~~  175 (483)
                      +|++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||++   +.++.++|+|||.+.......  ..
T Consensus        86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~~~~~~~~~~  162 (267)
T 3t9t_A           86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSS  162 (267)
T ss_dssp             TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CGGGCEEECCTTGGGGBCCHHHHST
T ss_pred             CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE---CCCCCEEEccccccccccccccccc
Confidence            999999999865 568999999999999999999999999999999999999   567789999999987654321  11


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....+++.|+|||++.+..++.++|+||+|+++|+|++ |..||...........+.......   .....++.+.++|.
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~l~~li~  239 (267)
T 3t9t_A          163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY---KPRLASTHVYQIMN  239 (267)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---CCTTSCHHHHHHHH
T ss_pred             ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCC---CCccCcHHHHHHHH
Confidence            23456788999999988788999999999999999999 899999888888877777653322   22467899999999


Q ss_pred             HhCccCCCCCCCHHHHHcC
Q 048594          255 RMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h  273 (483)
                      +||..||.+|||+.+++++
T Consensus       240 ~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          240 HCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHccCChhhCcCHHHHHHH
Confidence            9999999999999999873

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.6e-37  Score=301.65  Aligned_cols=219  Identities=18%  Similarity=0.246  Sum_probs=183.1

Q ss_pred             ccceEEee-eecccCceeEEEEE--ECCCCCEEEEEEeccCCCCC-------------------------------cCeE
Q 048594           48 KLHFTIAE-ELCRGESGRIYLCT--ENSTGLQFACKSISKTSKSD-------------------------------EGYL   93 (483)
Q Consensus        48 ~~~y~~~~-~lg~G~~g~V~~~~--~~~~~~~~avK~~~~~~~~~-------------------------------~~~l   93 (483)
                      ..+|.+.+ .||+|+||+||+|.  ++.+++.||||++.......                               ..|+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~l   94 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWML   94 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEE
Confidence            46899988 99999999999994  46678999999997653211                               1189


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ||||+.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++.   .++.+||+|||++.......
T Consensus        95 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~~~~~  171 (291)
T 1xbb_A           95 VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADE  171 (291)
T ss_dssp             EEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTCEECCTTC
T ss_pred             EEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEe---CCCcEEEccCCcceeeccCC
Confidence            999999999999999988899999999999999999999999999999999999994   55689999999998765432


Q ss_pred             ee----cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          174 VY----EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       174 ~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      ..    ....+++.|+|||.+.+..++.++||||||+++|+|++ |..||.+.........+......   ...+.+++.
T Consensus       172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  248 (291)
T 1xbb_A          172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPAGCPRE  248 (291)
T ss_dssp             SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHH
T ss_pred             CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHH
Confidence            21    22345788999999988788899999999999999999 99999988877777776654322   123568999


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHc
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.++|.+||..||.+|||+.++++
T Consensus       249 l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          249 MYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999999876

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=9.2e-38  Score=320.15  Aligned_cols=226  Identities=26%  Similarity=0.399  Sum_probs=170.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------CcCeEEEeccCC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------DEGYLKREHCDG  100 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------~~~~lv~E~~~g  100 (483)
                      .+|.+.+.||+|+||+|+. ....+|+.||||++......                            ...|+|||||.|
T Consensus        24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g  102 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA  102 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCC
Confidence            4699999999999999763 44567999999998654311                            011999999975


Q ss_pred             CChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC--CCCcEEEeecccceeccCCc----
Q 048594          101 GTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD--ENATLKATDFGLAFFFEEGK----  173 (483)
Q Consensus       101 ~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~--~~~~ikl~Dfg~a~~~~~~~----  173 (483)
                       +|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+..++  ....+||+|||++.......    
T Consensus       103 -~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~  181 (432)
T 3p23_A          103 -TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFS  181 (432)
T ss_dssp             -EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--------
T ss_pred             -CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCccee
Confidence             9999997653 466667789999999999999999999999999999996432  23468899999998765332    


Q ss_pred             eecccccCCcccCccccC---CCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          174 VYEEVVGTPLYMAPELLG---PCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      .....+||+.|+|||++.   ...++.++||||+||++|+|++ |..||...........+...... ...+....+..+
T Consensus       182 ~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  260 (432)
T 3p23_A          182 RRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLD-CLHPEKHEDVIA  260 (432)
T ss_dssp             ----CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCT-TSCTTCHHHHHH
T ss_pred             eccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCcc-ccCccccccHHH
Confidence            223467999999999997   3456789999999999999999 99999655443332222211111 111223346678


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+||.+||+.||.+|||+.++++||||.
T Consensus       261 ~~li~~~L~~dP~~Rps~~evl~hp~f~  288 (432)
T 3p23_A          261 RELIEKMIAMDPQKRPSAKHVLKHPFFW  288 (432)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHTSTTTC
T ss_pred             HHHHHHHHhCCHhhCCCHHHHHhCcccc
Confidence            9999999999999999999999999997

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.3e-37  Score=305.99  Aligned_cols=219  Identities=18%  Similarity=0.258  Sum_probs=177.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEE----EEEEeccCCCCC------------------------------cCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQF----ACKSISKTSKSD------------------------------EGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~----avK~~~~~~~~~------------------------------~~~l   93 (483)
                      .++|.+++.||+|+||+||+|.+..+++.+    |+|.+.......                              ..++
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   93 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL   93 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceE
Confidence            468999999999999999999999888765    666654322111                              1189


Q ss_pred             EEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |+||+.+++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++......
T Consensus        94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kL~DfG~a~~~~~~  170 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCTTC-------
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEE---cCCCCEEEccCcceeEccCc
Confidence            99999999999999764 679999999999999999999999999999999999999   45678999999999876433


Q ss_pred             ce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          173 KV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       173 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      ..   .....+|+.|+|||.+.+..++.++|||||||++|+|++ |..||.+.........+......   +..+.++.+
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  247 (327)
T 3lzb_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL---PQPPICTID  247 (327)
T ss_dssp             ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCTTBCHH
T ss_pred             cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCccCCHH
Confidence            22   223456778999999988889999999999999999999 99999988877777766654322   223568999


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHc
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.++|.+||..||.+|||+.++++
T Consensus       248 l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          248 VYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999999987

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=2.2e-37  Score=306.88  Aligned_cols=221  Identities=20%  Similarity=0.288  Sum_probs=184.8

Q ss_pred             cccceEEeeeecccCceeEEEEEEC-------CCCCEEEEEEeccCCC--------------------------------
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTEN-------STGLQFACKSISKTSK--------------------------------   87 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~~avK~~~~~~~--------------------------------   87 (483)
                      -.++|.+.+.||+|+||.||+|.+.       .++..||+|++.....                                
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            3578999999999999999999975       4678899999975431                                


Q ss_pred             CCcCeEEEeccCCCChHHHHhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee
Q 048594           88 SDEGYLKREHCDGGTLVDRISDRE----------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT  151 (483)
Q Consensus        88 ~~~~~lv~E~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~  151 (483)
                      ....|+|||||.|++|.+++....                .+++..+..++.||+.||.|||++||+||||||+||++  
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll--  190 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV--  190 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE--
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE--
Confidence            111299999999999999998654                38999999999999999999999999999999999999  


Q ss_pred             CCCCCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHH
Q 048594          152 DDENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTL  227 (483)
Q Consensus       152 ~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~  227 (483)
                       +.++.+||+|||++........   .....+++.|+|||++.+..++.++||||||+++|+|++ |..||.+.......
T Consensus       191 -~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~  269 (334)
T 2pvf_A          191 -TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF  269 (334)
T ss_dssp             -CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred             -cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH
Confidence             6778999999999987654322   223456788999999988788999999999999999999 99999988877777


Q ss_pred             HHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          228 TAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       228 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ..+......   .....++.++.++|.+||..||.+|||+.+++++
T Consensus       270 ~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          270 KLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHHHHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhcCCCC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            776655322   2234688999999999999999999999999873

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-37  Score=310.62  Aligned_cols=221  Identities=17%  Similarity=0.238  Sum_probs=178.6

Q ss_pred             ccceEEeeeecccCceeEEEEEECCC--------CCEEEEEEeccCCC--------------------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENST--------GLQFACKSISKTSK--------------------------------   87 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~--------~~~~avK~~~~~~~--------------------------------   87 (483)
                      .++|.+.+.||+|+||.||+|.++.+        ++.||+|++.....                                
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~  120 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP  120 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence            57899999999999999999999984        88999999975420                                


Q ss_pred             ---------CCcCeEEEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCC
Q 048594           88 ---------SDEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA  156 (483)
Q Consensus        88 ---------~~~~~lv~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~  156 (483)
                               ....|+||||| |++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++   .++
T Consensus       121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~---~~~  196 (352)
T 2jii_A          121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD---PED  196 (352)
T ss_dssp             CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEE---TTE
T ss_pred             chhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEc---CCC
Confidence                     12339999999 89999999876  7899999999999999999999999999999999999994   455


Q ss_pred             --cEEEeecccceeccCCce--------ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCC--hH
Q 048594          157 --TLKATDFGLAFFFEEGKV--------YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES--LY  224 (483)
Q Consensus       157 --~ikl~Dfg~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~--~~  224 (483)
                        .+||+|||++..+.....        .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+..  ..
T Consensus       197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  276 (352)
T 2jii_A          197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE  276 (352)
T ss_dssp             EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred             CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHH
Confidence              899999999976643221        133478999999999998889999999999999999999999997753  22


Q ss_pred             HHHHHHH---ccccCCC--CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          225 GTLTAIM---SREIDFK--SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       225 ~~~~~i~---~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .......   .....+.  ...+..+++++.+||.+||..||.+|||+.++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          277 DIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             HHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            2222221   1111111  1122357899999999999999999999999876

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=5.8e-38  Score=309.47  Aligned_cols=218  Identities=22%  Similarity=0.291  Sum_probs=172.2

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|++.+.||+|+||+||+|.+.  ++.||||++.....                                 ....|+||
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~  101 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT  101 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence            57999999999999999999876  78999999865321                                 00128999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC----------CCeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN----------GIMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~----------~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                      |||++++|.+++... ++++..+..++.||+.||.|||+.          +|+||||||+|||+   +..+.+||+|||+
T Consensus       102 e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill---~~~~~~kL~DFg~  177 (322)
T 3soc_A          102 AFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTACIADFGL  177 (322)
T ss_dssp             ECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE---CTTCCEEECCCTT
T ss_pred             ecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE---CCCCeEEEccCCc
Confidence            999999999999775 699999999999999999999999          99999999999999   6778999999999


Q ss_pred             ceeccCCce---ecccccCCcccCccccCCC-----CCCCcCchHHHHHHHHHHhhCCCCCCCCCh--------------
Q 048594          166 AFFFEEGKV---YEEVVGTPLYMAPELLGPC-----KYGKEIDIWSAGLILYNLLSGAQPFWAESL--------------  223 (483)
Q Consensus       166 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslGvil~~ll~g~~pf~~~~~--------------  223 (483)
                      +........   .....||+.|+|||++.+.     .++.++|||||||++|+|++|..||.+...              
T Consensus       178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~  257 (322)
T 3soc_A          178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP  257 (322)
T ss_dssp             CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred             ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence            987654322   2335789999999999763     345678999999999999999999975421              


Q ss_pred             --HHHHHHHHccccCCCCCC-C--CCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          224 --YGTLTAIMSREIDFKSDP-W--PTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       224 --~~~~~~i~~~~~~~~~~~-~--~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                        ......+........... +  ...++++.+||.+||+.||.+|||+.++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          258 SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence              122222222221111100 0  112456999999999999999999999976

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=5e-38  Score=304.53  Aligned_cols=220  Identities=16%  Similarity=0.251  Sum_probs=176.1

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCC-------CEEEEEEeccCCC------------------------------CC
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTG-------LQFACKSISKTSK------------------------------SD   89 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~~avK~~~~~~~------------------------------~~   89 (483)
                      ..++|.+.+.||+|+||+||+|.++.++       ..||+|++.....                              ..
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD   85 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence            3578999999999999999999999887       4799999865431                              11


Q ss_pred             cCeEEEeccCCCChHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCC-----CCcEEEeec
Q 048594           90 EGYLKREHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDE-----NATLKATDF  163 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~~~-l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~-----~~~ikl~Df  163 (483)
                      ..|+|||||.|++|.+++..... +++..+..++.||+.||.|||+++|+||||||+|||+..++.     .+.+||+||
T Consensus        86 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df  165 (289)
T 4fvq_A           86 ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP  165 (289)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred             CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccC
Confidence            22899999999999999987654 999999999999999999999999999999999999965332     122999999


Q ss_pred             ccceeccCCceecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCC
Q 048594          164 GLAFFFEEGKVYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW  242 (483)
Q Consensus       164 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  242 (483)
                      |.+......   ....||+.|+|||++.+ ..++.++||||+|+++|+|++|..|+...................+    
T Consensus       166 g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~----  238 (289)
T 4fvq_A          166 GISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLP----  238 (289)
T ss_dssp             CSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCC----
T ss_pred             cccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCC----
Confidence            998765332   33468899999999976 5689999999999999999995554444433333333333333222    


Q ss_pred             CCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          243 PTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       243 ~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      +..++++.++|.+||+.||.+|||+.++++|
T Consensus       239 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          239 APKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            3457789999999999999999999999985

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.7e-37  Score=299.83  Aligned_cols=222  Identities=17%  Similarity=0.224  Sum_probs=182.1

Q ss_pred             ccccceEEeeeecccCceeEEEEEECC---CCCEEEEEEeccCCC------------------------------CCcCe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENS---TGLQFACKSISKTSK------------------------------SDEGY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~------------------------------~~~~~   92 (483)
                      ...++|.+.+.||+|+||+||+|.+..   ++..||+|++.....                              ....|
T Consensus         9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   88 (281)
T 3cc6_A            9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTW   88 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCE
T ss_pred             ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCE
Confidence            345789999999999999999998654   345699999876521                              11228


Q ss_pred             EEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           93 LKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +||||+.+++|.+++... ..+++..+..++.||+.||.|||++|++||||||+||++.   .++.+||+|||.+.....
T Consensus        89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~  165 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA---SPECVKLGDFGLSRYIED  165 (281)
T ss_dssp             EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---ETTEEEECCCCGGGCC--
T ss_pred             EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEC---CCCcEEeCccCCCccccc
Confidence            999999999999999764 4699999999999999999999999999999999999994   556899999999987644


Q ss_pred             Cce--ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          172 GKV--YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       172 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      ...  .....+++.|+|||++.+..++.++||||||+++|+|++ |..||...........+......   +....+++.
T Consensus       166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  242 (281)
T 3cc6_A          166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL---PKPDLCPPV  242 (281)
T ss_dssp             -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCC---CCCTTCCHH
T ss_pred             ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCC---CCCCCCCHH
Confidence            321  223456788999999988889999999999999999998 99999887777776666554322   122467899


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      +.++|.+||..||.+|||+.+++++
T Consensus       243 l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          243 LYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHccCCchhCcCHHHHHHH
Confidence            9999999999999999999999873

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=3.1e-38  Score=322.17  Aligned_cols=214  Identities=16%  Similarity=0.211  Sum_probs=175.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------------
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------------   89 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------------   89 (483)
                      ..|...+.||+|+||+||+|.+..+|+.||||++.......                                       
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            45889999999999999999999999999999987322111                                       


Q ss_pred             ---------------------cCeEEEeccCCCChHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeC
Q 048594           90 ---------------------EGYLKREHCDGGTLVDRISD-------RERYTERAAASVFRSVVNALHACHSNGIMHRD  141 (483)
Q Consensus        90 ---------------------~~~lv~E~~~g~~L~~~l~~-------~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~d  141 (483)
                                           ..+++|+++ +++|.+++..       ..++++..+..++.||+.||.|||++||+|||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrD  236 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY  236 (413)
T ss_dssp             ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence                                 015566655 5689988841       34578889999999999999999999999999


Q ss_pred             CCCCeEEEeeCCCCCcEEEeecccceeccCCceecccccCCcccCcccc----------CCCCCCCcCchHHHHHHHHHH
Q 048594          142 LKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL----------GPCKYGKEIDIWSAGLILYNL  211 (483)
Q Consensus       142 lkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DiwslGvil~~l  211 (483)
                      |||+|||+   +.++.+||+|||++.....  .....+| +.|+|||++          ....++.++|||||||++|+|
T Consensus       237 iKp~NILl---~~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~el  310 (413)
T 3dzo_A          237 LRPVDIVL---DQRGGVFLTGFEHLVRDGA--SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI  310 (413)
T ss_dssp             CCGGGEEE---CTTCCEEECCGGGCEETTE--EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHH
T ss_pred             cccceEEE---ecCCeEEEEeccceeecCC--ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHH
Confidence            99999999   6777899999999887543  2455678 999999998          555678899999999999999


Q ss_pred             hhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          212 LSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       212 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ++|+.||.+.........+.        ..++.+|+++.+||.+||+.||.+|||+.++++||||+
T Consensus       311 ltg~~Pf~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~  368 (413)
T 3dzo_A          311 WCADLPNTDDAALGGSEWIF--------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE  368 (413)
T ss_dssp             HHSSCCCCTTGGGSCSGGGG--------SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             HHCCCCCCCcchhhhHHHHH--------hhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHH
Confidence            99999998765433322221        12346789999999999999999999999999999997

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=3.5e-37  Score=300.51  Aligned_cols=220  Identities=22%  Similarity=0.309  Sum_probs=176.1

Q ss_pred             ccceEEeeeecccCceeEEEEE----ECCCCCEEEEEEeccCCCC---------------------------------Cc
Q 048594           48 KLHFTIAEELCRGESGRIYLCT----ENSTGLQFACKSISKTSKS---------------------------------DE   90 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~~avK~~~~~~~~---------------------------------~~   90 (483)
                      .++|++.+.||+|+||.||+|.    +..+++.||+|++......                                 ..
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   99 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   99 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence            4579999999999999999999    6778999999998754311                                 11


Q ss_pred             CeEEEeccCCCChHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           91 GYLKREHCDGGTLVDRIS-DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~-~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      .|+|||||++++|.+++. ....+++..+..++.||+.||.|||++||+||||||+||+++   .++.++|+|||.+...
T Consensus       100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~  176 (302)
T 4e5w_A          100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTKAI  176 (302)
T ss_dssp             EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEc---CCCCEEECcccccccc
Confidence            289999999999999994 456799999999999999999999999999999999999994   5578999999999877


Q ss_pred             cCCce----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCC--------------ChHHHHHHHH
Q 048594          170 EEGKV----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE--------------SLYGTLTAIM  231 (483)
Q Consensus       170 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~--------------~~~~~~~~i~  231 (483)
                      .....    .....||+.|+|||++.+..++.++||||+|+++|+|++|..|+...              ..........
T Consensus       177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (302)
T 4e5w_A          177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL  256 (302)
T ss_dssp             CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred             cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH
Confidence            54432    22346788899999998878899999999999999999999886321              1111111111


Q ss_pred             ccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ....  ..+..+.+++.+.++|.+||..||.+|||+.++++
T Consensus       257 ~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          257 KEGK--RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HTTC--CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             hccC--CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            1111  12223578999999999999999999999999986

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=8e-38  Score=313.88  Aligned_cols=220  Identities=18%  Similarity=0.210  Sum_probs=173.6

Q ss_pred             ccccceEEeeeecccCceeEEEE-----EECCCCCEEEEEEeccCCC------------------------------CCc
Q 048594           46 DIKLHFTIAEELCRGESGRIYLC-----TENSTGLQFACKSISKTSK------------------------------SDE   90 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~-----~~~~~~~~~avK~~~~~~~------------------------------~~~   90 (483)
                      .-.++|.+.+.||+|+||+||+|     .+..+++.||+|++.....                              .+.
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~  141 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG  141 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence            34578999999999999999999     4677899999999976431                              112


Q ss_pred             CeEEEeccCCCChHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEee--------CCCCCc
Q 048594           91 GYLKREHCDGGTLVDRISD-----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTT--------DDENAT  157 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~--------~~~~~~  157 (483)
                      .|+|||||+||+|.+++..     ...+++..+..++.||+.||.|||++||+||||||+|||++.        ++..+.
T Consensus       142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~  221 (365)
T 3e7e_A          142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAG  221 (365)
T ss_dssp             EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTT
T ss_pred             cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCC
Confidence            2999999999999999973     567999999999999999999999999999999999999953        122789


Q ss_pred             EEEeecccceecc---CCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc
Q 048594          158 LKATDFGLAFFFE---EGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE  234 (483)
Q Consensus       158 ikl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~  234 (483)
                      +||+|||++..+.   ........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.......       ..
T Consensus       222 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-------~~  294 (365)
T 3e7e_A          222 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-------CK  294 (365)
T ss_dssp             EEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-------EE
T ss_pred             EEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-------ee
Confidence            9999999997653   3334456789999999999999889999999999999999999999996543210       00


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          235 IDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       235 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ....... ...+..+.+++..||+.+|.+|++..+.+.+
T Consensus       295 ~~~~~~~-~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~  332 (365)
T 3e7e_A          295 PEGLFRR-LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ  332 (365)
T ss_dssp             ECSCCTT-CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred             echhccc-cCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence            1011111 1346789999999999999999765555543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=6.3e-37  Score=293.51  Aligned_cols=214  Identities=18%  Similarity=0.229  Sum_probs=181.9

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~l   93 (483)
                      .++|.+.+.||+|+||+||+|.++  |..+|+|++......                                  ...|+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   86 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL   86 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence            468999999999999999999986  889999998754311                                  22289


Q ss_pred             EEeccCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCC--CeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           94 KREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      |||||+|++|.+++....  .+++..+..++.||+.||.|||+++  ++||||||+||++   +.++.++|+|||++...
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~---~~~~~~~l~~~~~~~~~  163 (271)
T 3kmu_A           87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI---DEDMTARISMADVKFSF  163 (271)
T ss_dssp             EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE---CTTSCEEEEGGGSCCTT
T ss_pred             eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE---cCCcceeEEeccceeee
Confidence            999999999999998765  4899999999999999999999999  9999999999999   67778999999887653


Q ss_pred             cCCceecccccCCcccCccccCCCCCCC---cCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          170 EEGKVYEEVVGTPLYMAPELLGPCKYGK---EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ..    ....||+.|+|||.+.+..++.   ++||||||+++|+|++|..||.+.........+........  ..+.++
T Consensus       164 ~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~  237 (271)
T 3kmu_A          164 QS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT--IPPGIS  237 (271)
T ss_dssp             SC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCC--CCTTCC
T ss_pred             cc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCC--CCCCCC
Confidence            32    3457899999999998755544   79999999999999999999998888777666665543322  235789


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +++.++|.+||..||.+|||+.++++
T Consensus       238 ~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          238 PHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999999986

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=4.5e-37  Score=296.43  Aligned_cols=220  Identities=20%  Similarity=0.288  Sum_probs=186.3

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------CcCeEEEec
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------DEGYLKREH   97 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------~~~~lv~E~   97 (483)
                      ...++|.+.+.||+|+||.||+|.++ ++..||+|++......                            ...|+||||
T Consensus        10 v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~   88 (279)
T 1qpc_A           10 VPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEY   88 (279)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             cCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEec
Confidence            34578999999999999999999976 5678999999764321                            112899999


Q ss_pred             cCCCChHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           98 CDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~~--~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      +.|++|.+++....  .+++..+..++.||+.||.|||++|++||||||+||++   +.++.+||+|||.+.........
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~  165 (279)
T 1qpc_A           89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNEYT  165 (279)
T ss_dssp             CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECSSSCEE
T ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE---cCCCCEEECCCcccccccCcccc
Confidence            99999999997543  69999999999999999999999999999999999999   67789999999999876543322


Q ss_pred             --cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          176 --EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       176 --~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                        ....+++.|+|||++.+..++.++||||||+++|+|++ |..||.+.........+......   .....+++++.++
T Consensus       166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l  242 (279)
T 1qpc_A          166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM---VRPDNCPEELYQL  242 (279)
T ss_dssp             CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHHHHHH
T ss_pred             cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC---CCcccccHHHHHH
Confidence              23456788999999987788999999999999999999 99999988887777777655322   2234688999999


Q ss_pred             HHHhCccCCCCCCCHHHHHc
Q 048594          253 IRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~  272 (483)
                      |.+||..||.+|||+.++++
T Consensus       243 i~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          243 MRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhccChhhCCCHHHHHH
Confidence            99999999999999999876

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=3e-37  Score=303.24  Aligned_cols=221  Identities=24%  Similarity=0.316  Sum_probs=176.2

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~l   93 (483)
                      .++|.+.+.||+|+||.||+|.++.+|+.||||++......                                  ...|+
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            46899999999999999999999999999999998543210                                  01179


Q ss_pred             EEeccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           94 KREHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      |+|||.+++|.+++..    ...+++..+..++.||+.||.|||+++|+||||||+||++   +.++.+||+|||.+...
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL---GDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCSSCEES
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---cCCCCEEEEecCcchhc
Confidence            9999999999999875    4679999999999999999999999999999999999999   67789999999998764


Q ss_pred             cCCce----------ecccccCCcccCccccCCCC---CCCcCchHHHHHHHHHHhhCCCCCCCCC--hHHHHHHHHccc
Q 048594          170 EEGKV----------YEEVVGTPLYMAPELLGPCK---YGKEIDIWSAGLILYNLLSGAQPFWAES--LYGTLTAIMSRE  234 (483)
Q Consensus       170 ~~~~~----------~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslGvil~~ll~g~~pf~~~~--~~~~~~~i~~~~  234 (483)
                      .....          .....||+.|+|||++.+..   ++.++||||||+++|+|++|..||....  .......+.. .
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~  263 (317)
T 2buj_A          185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-Q  263 (317)
T ss_dssp             CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-C
T ss_pred             ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-c
Confidence            32111          12345799999999987644   6889999999999999999999995311  1111222222 2


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCC
Q 048594          235 IDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHP  274 (483)
Q Consensus       235 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~  274 (483)
                      ..  .+..+.+++++.++|.+||..||.+|||+.+++++-
T Consensus       264 ~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L  301 (317)
T 2buj_A          264 LS--IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL  301 (317)
T ss_dssp             ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CC--CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHh
Confidence            22  223357899999999999999999999999999863

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.7e-37  Score=307.14  Aligned_cols=227  Identities=26%  Similarity=0.428  Sum_probs=165.6

Q ss_pred             cccccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------C------------
Q 048594           39 ILGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------S------------   88 (483)
Q Consensus        39 ~~~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------~------------   88 (483)
                      ..+...+.-..+|.+.+.||+|+||.||+|.++.+|+.||+|++.....                  .            
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~   97 (337)
T 3ll6_A           18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASI   97 (337)
T ss_dssp             STTCEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             hhcceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccc
Confidence            3344444556689999999999999999999999999999998844320                  0            


Q ss_pred             ---------CcCeEEEeccCCCChHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeeCCCCCeEEEeeCCC
Q 048594           89 ---------DEGYLKREHCDGGTLVDRISD---RERYTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDE  154 (483)
Q Consensus        89 ---------~~~~lv~E~~~g~~L~~~l~~---~~~l~~~~~~~i~~qil~~l~~LH~~~--ivH~dlkp~NIll~~~~~  154 (483)
                               ...|+|+|||. |+|.+++..   .+++++..+..++.||+.||.|||+++  |+||||||+|||+   +.
T Consensus        98 ~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~---~~  173 (337)
T 3ll6_A           98 GKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL---SN  173 (337)
T ss_dssp             CTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEE---CT
T ss_pred             cccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEE---CC
Confidence                     00279999997 589988864   567999999999999999999999999  9999999999999   66


Q ss_pred             CCcEEEeecccceeccCCcee-------------cccccCCcccCcccc---CCCCCCCcCchHHHHHHHHHHhhCCCCC
Q 048594          155 NATLKATDFGLAFFFEEGKVY-------------EEVVGTPLYMAPELL---GPCKYGKEIDIWSAGLILYNLLSGAQPF  218 (483)
Q Consensus       155 ~~~ikl~Dfg~a~~~~~~~~~-------------~~~~gt~~y~aPE~~---~~~~~~~~~DiwslGvil~~ll~g~~pf  218 (483)
                      ++.+||+|||++.........             ....||+.|+|||++   .+..++.++|||||||++|+|++|..||
T Consensus       174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~  253 (337)
T 3ll6_A          174 QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF  253 (337)
T ss_dssp             TSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             CCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCC
Confidence            779999999999876543221             134689999999998   4556788999999999999999999999


Q ss_pred             CCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCc
Q 048594          219 WAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW  275 (483)
Q Consensus       219 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~  275 (483)
                      ..........    ....  .+.....+..+.+||.+||+.||.+|||+.++++|.+
T Consensus       254 ~~~~~~~~~~----~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          254 EDGAKLRIVN----GKYS--IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             ----------------CC--CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             cchhHHHhhc----Cccc--CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            7654433222    2222  2223456788999999999999999999999998754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=7.3e-37  Score=315.46  Aligned_cols=216  Identities=23%  Similarity=0.315  Sum_probs=182.6

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEec
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKREH   97 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E~   97 (483)
                      -.++|.+.+.||+|+||.||+|.++  |+.||||++......                             ...|+||||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~  268 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY  268 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence            3578999999999999999999986  779999999764311                             122999999


Q ss_pred             cCCCChHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           98 CDGGTLVDRISDRER--YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~--l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      |.+|+|.+++...+.  +++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++......  .
T Consensus       269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~--~  343 (450)
T 1k9a_A          269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASST--Q  343 (450)
T ss_dssp             CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTSCEEECCCTTCEECC-----
T ss_pred             cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---CCCCCEEEeeCCCccccccc--c
Confidence            999999999986543  7999999999999999999999999999999999999   67789999999999865332  2


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....+++.|+|||++.+..++.++|||||||++|+|++ |..||.+....+....+..+..   ....+.+|+.+.++|.
T Consensus       344 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~---~~~p~~~~~~l~~li~  420 (450)
T 1k9a_A          344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPAVYDVMK  420 (450)
T ss_dssp             ---CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCC---CCCCTTCCHHHHHHHH
T ss_pred             cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCcCCHHHHHHHH
Confidence            23467889999999988889999999999999999998 9999998877777777765432   1223578999999999


Q ss_pred             HhCccCCCCCCCHHHHHc
Q 048594          255 RMLIRDPNNQITVAQILK  272 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~  272 (483)
                      +||..||.+|||+.++++
T Consensus       421 ~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          421 NCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCChhHCcCHHHHHH
Confidence            999999999999999875

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.4e-37  Score=298.74  Aligned_cols=222  Identities=19%  Similarity=0.264  Sum_probs=185.1

Q ss_pred             ccceEEee-eecccCceeEEEEEEC--CCCCEEEEEEeccCCCC------------------------------CcCeEE
Q 048594           48 KLHFTIAE-ELCRGESGRIYLCTEN--STGLQFACKSISKTSKS------------------------------DEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~------------------------------~~~~lv   94 (483)
                      .++|.+.+ .||+|+||.||+|.++  .++..||+|++......                              ...|+|
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv   87 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV   87 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEE
Confidence            45677877 9999999999999864  46788999999764311                              112899


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ||||.+++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++.   ..+.++|+|||.+.......
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~Dfg~~~~~~~~~  164 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKALGADD  164 (287)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---ETTEEEECCCTTCEECTTCS
T ss_pred             EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEc---CCCCEEECcccceeeeccCc
Confidence            9999999999999654 5699999999999999999999999999999999999994   56789999999998765332


Q ss_pred             ee----cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          174 VY----EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       174 ~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      ..    ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+.........+......   ...+.++++
T Consensus       165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~  241 (287)
T 1u59_A          165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPECPPE  241 (287)
T ss_dssp             CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC---CCCTTCCHH
T ss_pred             ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcC---CCCCCcCHH
Confidence            21    22346788999999987788999999999999999998 99999988877777777665322   223578999


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHcCCc
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILKHPW  275 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~h~~  275 (483)
                      +.++|.+||..||.+|||+.++++|.+
T Consensus       242 l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          242 LYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            999999999999999999999998643

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=3.3e-38  Score=334.85  Aligned_cols=230  Identities=27%  Similarity=0.389  Sum_probs=184.4

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-------------------------------------CCc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-------------------------------------SDE   90 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------------------------------------~~~   90 (483)
                      .++|.+.+.||+|+||+||+|.++.+|+.||||++.....                                     ...
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            3689999999999999999999999999999999865310                                     122


Q ss_pred             CeEEEeccCCCChHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           91 GYLKREHCDGGTLVDRISDRE---RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~---~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                      .|+|||||+|++|.+++....   .+++..++.++.||+.||.|||+.||+||||||+||++..++....+||+|||.+.
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~  172 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK  172 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence            289999999999999998754   69999999999999999999999999999999999999765555669999999999


Q ss_pred             eccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHH--------------Hcc
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI--------------MSR  233 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i--------------~~~  233 (483)
                      ............||+.|+|||++.+..++.++||||+|+++|+|++|..||.+......+...              ..+
T Consensus       173 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g  252 (676)
T 3qa8_A          173 ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTG  252 (676)
T ss_dssp             BTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSS
T ss_pred             ccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhcc
Confidence            877666556678999999999999889999999999999999999999999765432221100              011


Q ss_pred             ccCCCC------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          234 EIDFKS------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       234 ~~~~~~------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ...+..      ...+.+++.+.+||.+||.+||.+|||+.++++||||.
T Consensus       253 ~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~  302 (676)
T 3qa8_A          253 AVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ  302 (676)
T ss_dssp             SCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHH
T ss_pred             ccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHH
Confidence            111111      11223678999999999999999999999999999986

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=2.3e-37  Score=311.49  Aligned_cols=220  Identities=21%  Similarity=0.327  Sum_probs=174.4

Q ss_pred             cccceEEeeeecccCceeEEEEEEC---CCCCEEEEEEeccCCC-------------------------------CCcCe
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTEN---STGLQFACKSISKTSK-------------------------------SDEGY   92 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~-------------------------------~~~~~   92 (483)
                      -..+|.+.+.||+|+||.||+|.++   .++..||||++.....                               ....|
T Consensus        43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  122 (373)
T 2qol_A           43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM  122 (373)
T ss_dssp             CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence            3468999999999999999999987   5678899999875421                               11129


Q ss_pred             EEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           93 LKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +|||||+|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~  199 (373)
T 2qol_A          123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVLED  199 (373)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC--------
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---cCCCCEEECcCcccccccc
Confidence            999999999999999875 479999999999999999999999999999999999999   6778999999999987643


Q ss_pred             Cce----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          172 GKV----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       172 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ...    .....+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+......   +....++
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~~~  276 (373)
T 2qol_A          200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPMDCP  276 (373)
T ss_dssp             --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEEC---CCCTTCB
T ss_pred             CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCcccc
Confidence            321    112345678999999988889999999999999999998 99999988888777777654321   2234678


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ..+.++|.+||+.||.+|||+.++++
T Consensus       277 ~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          277 AALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            99999999999999999999999876

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=3.7e-37  Score=296.93  Aligned_cols=215  Identities=22%  Similarity=0.317  Sum_probs=177.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEecc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKREHC   98 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E~~   98 (483)
                      .++|++.+.||+|++|+||+|.++  |+.||+|++......                             ...|+|+||+
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~   97 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   97 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence            468999999999999999999875  889999999764311                             1129999999


Q ss_pred             CCCChHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceec
Q 048594           99 DGGTLVDRISDRER--YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE  176 (483)
Q Consensus        99 ~g~~L~~~l~~~~~--l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~  176 (483)
                      ++++|.+++.....  +++..+..++.||+.||.|||++|++||||||+||++   +.++.++|+|||.+.......  .
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~--~  172 (278)
T 1byg_A           98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQ--D  172 (278)
T ss_dssp             TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC-----------
T ss_pred             CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEE---eCCCcEEEeeccccccccccc--c
Confidence            99999999976543  8999999999999999999999999999999999999   677899999999987654332  3


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ...+++.|+|||++.+..++.++||||||+++|+|++ |..||...........+.....   ......+++.+.++|.+
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~  249 (278)
T 1byg_A          173 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPAVYEVMKN  249 (278)
T ss_dssp             ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC---CCCCTTCCHHHHHHHHH
T ss_pred             CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCcccCCHHHHHHHHH
Confidence            3467889999999988889999999999999999998 9999988877777776655422   22235789999999999


Q ss_pred             hCccCCCCCCCHHHHHc
Q 048594          256 MLIRDPNNQITVAQILK  272 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~  272 (483)
                      ||..||.+|||+.++++
T Consensus       250 ~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          250 CWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HhcCChhhCCCHHHHHH
Confidence            99999999999999876

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=5.7e-37  Score=316.68  Aligned_cols=220  Identities=20%  Similarity=0.287  Sum_probs=185.9

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------CcCeEEEec
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------DEGYLKREH   97 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------~~~~lv~E~   97 (483)
                      .-.++|.+.+.||+|+||+||+|.++ ++..||||++......                            ...|+||||
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~  263 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEF  263 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             echHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEee
Confidence            34578999999999999999999987 4678999999764311                            122999999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      |.+|+|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+++....... 
T Consensus       264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a~~~~~~~~~  340 (454)
T 1qcf_A          264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNEYT  340 (454)
T ss_dssp             CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTCCEEECSTTGGGGBCCHHHH
T ss_pred             cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE---CCCCcEEEeeCCCceEcCCCcee
Confidence            9999999999754  368999999999999999999999999999999999999   6778999999999987643211 


Q ss_pred             -ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          175 -YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       175 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                       .....+++.|+|||++....++.++|||||||++|+|++ |..||.+....+....+..+.. .  +....+|+++.++
T Consensus       341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~-~--~~~~~~~~~l~~l  417 (454)
T 1qcf_A          341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-M--PRPENCPEELYNI  417 (454)
T ss_dssp             TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC-C--CCCTTSCHHHHHH
T ss_pred             ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-C--CCCCCCCHHHHHH
Confidence             122345778999999988889999999999999999999 9999999888888777765422 2  2235789999999


Q ss_pred             HHHhCccCCCCCCCHHHHHc
Q 048594          253 IRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~  272 (483)
                      |.+||..||.+|||+.+++.
T Consensus       418 i~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          418 MMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHccCChhHCcCHHHHHH
Confidence            99999999999999999876

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-36  Score=301.95  Aligned_cols=223  Identities=19%  Similarity=0.290  Sum_probs=180.0

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCC----CEEEEEEeccCCCC-------------------------------C
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTG----LQFACKSISKTSKS-------------------------------D   89 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~~avK~~~~~~~~-------------------------------~   89 (483)
                      +....+|.+.+.||+|+||+||+|.++.++    ..||+|++......                               .
T Consensus        40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  119 (333)
T 1mqb_A           40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK  119 (333)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC
Confidence            344578999999999999999999987654    45999998754211                               1


Q ss_pred             cCeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           90 EGYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      ..|+|||||.|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||.+..
T Consensus       120 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~~~~  196 (333)
T 1mqb_A          120 PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRV  196 (333)
T ss_dssp             SEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC---
T ss_pred             CcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEE---CCCCcEEECCCCcchh
Confidence            129999999999999999765 679999999999999999999999999999999999999   6778999999999987


Q ss_pred             ccCCce----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCC
Q 048594          169 FEEGKV----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWP  243 (483)
Q Consensus       169 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  243 (483)
                      ......    .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+.........+..+..   .+...
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~---~~~~~  273 (333)
T 1mqb_A          197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR---LPTPM  273 (333)
T ss_dssp             --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC---CCCCT
T ss_pred             hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCc---CCCcc
Confidence            643221    122345778999999988889999999999999999998 9999998888777777765522   12234


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          244 TISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       244 ~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .+++.+.++|.+||..||.+|||+.+++++
T Consensus       274 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          274 DCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             TCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            688999999999999999999999998874

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=4.6e-37  Score=304.11  Aligned_cols=223  Identities=20%  Similarity=0.287  Sum_probs=183.7

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCC-----EEEEEEeccCCC--------------------------------
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGL-----QFACKSISKTSK--------------------------------   87 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~avK~~~~~~~--------------------------------   87 (483)
                      +-..++|.+.+.||+|+||+||+|.+..++.     .||+|.+.....                                
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  121 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH  121 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence            4446789999999999999999999987765     799999876421                                


Q ss_pred             CCcCeEEEeccCCCChHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC
Q 048594           88 SDEGYLKREHCDGGTLVDRISD--------------RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD  153 (483)
Q Consensus        88 ~~~~~lv~E~~~g~~L~~~l~~--------------~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~  153 (483)
                      ....|+|||||++++|.+++..              ...+++..+..++.||+.||.|||++||+||||||+||++   +
T Consensus       122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~---~  198 (333)
T 2i1m_A          122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL---T  198 (333)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEE---E
T ss_pred             CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEE---C
Confidence            1112999999999999999975              2468999999999999999999999999999999999999   4


Q ss_pred             CCCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHH
Q 048594          154 ENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTA  229 (483)
Q Consensus       154 ~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~  229 (483)
                      .++.+||+|||++........   .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+.........
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~  278 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK  278 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHH
T ss_pred             CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHH
Confidence            567899999999986643321   223456788999999988889999999999999999998 9999988765555555


Q ss_pred             HHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          230 IMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       230 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +........  .....++.+.++|.+||+.||.+|||+.++++
T Consensus       279 ~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          279 LVKDGYQMA--QPAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             HHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhcCCCCC--CCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            544433322  22457899999999999999999999999987

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.8e-37  Score=306.39  Aligned_cols=219  Identities=22%  Similarity=0.331  Sum_probs=179.1

Q ss_pred             cceEEeeeecccCceeEEEEE----ECCCCCEEEEEEeccCCCC--------------------------------CcCe
Q 048594           49 LHFTIAEELCRGESGRIYLCT----ENSTGLQFACKSISKTSKS--------------------------------DEGY   92 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~----~~~~~~~~avK~~~~~~~~--------------------------------~~~~   92 (483)
                      ++|++.+.||+|+||.||+|.    +..+++.||+|++......                                ...|
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            689999999999999999999    5778999999998754310                                1128


Q ss_pred             EEEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           93 LKREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +|||||+|++|.+++.. ..++++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||.+.....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLLPL  179 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCGGGCEECCT
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEE---CCCCCEEEcccccceeccc
Confidence            99999999999999976 4569999999999999999999999999999999999999   4567899999999987654


Q ss_pred             Cce----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH---------------HHHHHHHc
Q 048594          172 GKV----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY---------------GTLTAIMS  232 (483)
Q Consensus       172 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~---------------~~~~~i~~  232 (483)
                      ...    .....||+.|+|||++.+..++.++||||||+++|+|++|..||......               .....+..
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (327)
T 3lxl_A          180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE  259 (327)
T ss_dssp             TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred             CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence            321    12345788899999998878899999999999999999999998653321               11222222


Q ss_pred             cccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          233 REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      . .  ..+..+.+++.+.+||.+||..||.+|||+.+++++
T Consensus       260 ~-~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          260 G-Q--RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             T-C--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             c-c--CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            2 1  122235789999999999999999999999999764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=8.7e-38  Score=309.65  Aligned_cols=224  Identities=23%  Similarity=0.310  Sum_probs=172.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~l   93 (483)
                      .++|.+.+.||+|+||+||+|.+  +++.||||++......                                  ...|+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l   89 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL   89 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence            35799999999999999999976  5899999998643200                                  01179


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN---------GIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~---------~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                      |||||++++|.+++... ..++..+..++.||+.||.|||+.         +|+||||||+|||+   +..+.+||+|||
T Consensus        90 v~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill---~~~~~~kL~DFG  165 (336)
T 3g2f_A           90 VMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV---KNDGTCVISDFG  165 (336)
T ss_dssp             EECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEE---CTTSCEEECCCT
T ss_pred             EEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEE---cCCCcEEEeecc
Confidence            99999999999999765 458999999999999999999999         99999999999999   667899999999


Q ss_pred             cceeccCCc---------eecccccCCcccCccccCC-------CCCCCcCchHHHHHHHHHHhhCCCCCCCCCh-----
Q 048594          165 LAFFFEEGK---------VYEEVVGTPLYMAPELLGP-------CKYGKEIDIWSAGLILYNLLSGAQPFWAESL-----  223 (483)
Q Consensus       165 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslGvil~~ll~g~~pf~~~~~-----  223 (483)
                      ++..+....         .....+||+.|+|||++.+       ..++.++|||||||++|+|++|..||.....     
T Consensus       166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~  245 (336)
T 3g2f_A          166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ  245 (336)
T ss_dssp             TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred             ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence            998764321         1224579999999999976       3456789999999999999999777643211     


Q ss_pred             ------------HHHHHHHHc-ccc--CCCC--CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHH------cCCcCC
Q 048594          224 ------------YGTLTAIMS-REI--DFKS--DPWPTISSSAKDLIRRMLIRDPNNQITVAQIL------KHPWLN  277 (483)
Q Consensus       224 ------------~~~~~~i~~-~~~--~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L------~h~~~~  277 (483)
                                  ......... ...  .++.  ......++++.+||.+||..||.+|||+.|++      .++|-+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~  322 (336)
T 3g2f_A          246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER  322 (336)
T ss_dssp             CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred             HhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence                        111111111 111  1111  01112456899999999999999999999994      467776

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=6.1e-37  Score=302.38  Aligned_cols=229  Identities=20%  Similarity=0.241  Sum_probs=179.4

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cC
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EG   91 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~   91 (483)
                      ......++|.+.+.||+|+||.||+|.++ +|+.||||++.......                               ..
T Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  102 (326)
T 3uim_A           24 ELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER  102 (326)
T ss_dssp             HHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCC
T ss_pred             HHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCce
Confidence            34566789999999999999999999854 68999999987654211                               11


Q ss_pred             eEEEeccCCCChHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           92 YLKREHCDGGTLVDRISDRE----RYTERAAASVFRSVVNALHACHSN---GIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~----~l~~~~~~~i~~qil~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                      |+|||||.|++|.+++....    ++++..+..++.||+.||.|||++   ||+||||||+|||+   +.++.+||+|||
T Consensus       103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg  179 (326)
T 3uim_A          103 LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFG  179 (326)
T ss_dssp             EEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE---CTTCCEEECCCS
T ss_pred             EEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE---CCCCCEEeccCc
Confidence            89999999999999998653    499999999999999999999999   99999999999999   677899999999


Q ss_pred             cceeccCC--ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCC-----ChHHHHHHHHccccC-
Q 048594          165 LAFFFEEG--KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE-----SLYGTLTAIMSREID-  236 (483)
Q Consensus       165 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~-  236 (483)
                      ++......  .......||+.|+|||++.+..++.++||||+|+++|+|++|..||...     ........+. .... 
T Consensus       180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~  258 (326)
T 3uim_A          180 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK-GLLKE  258 (326)
T ss_dssp             SCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT-TTTSS
T ss_pred             cccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH-HHhhc
Confidence            99876432  2233456999999999998878899999999999999999999999521     1111111111 1100 


Q ss_pred             ----------CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          237 ----------FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       237 ----------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                                ......+..+..+.+++.+||+.||.+|||+.++++|-.-
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence                      0001112234679999999999999999999999998654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.8e-37  Score=303.08  Aligned_cols=223  Identities=23%  Similarity=0.359  Sum_probs=174.9

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-----------------------------C----CcC
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-----------------------------S----DEG   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----------------------------~----~~~   91 (483)
                      ..+.++|.+.+.||+|+||.||+|.++  |+.||||++.....                             .    ...
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  110 (337)
T 3mdy_A           33 RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL  110 (337)
T ss_dssp             TTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred             cccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence            466789999999999999999999986  89999999854320                             0    122


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeeeCCCCCeEEEeeCCCCCcEEEeec
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSN--------GIMHRDLKPENFIFTTDDENATLKATDF  163 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~--------~ivH~dlkp~NIll~~~~~~~~ikl~Df  163 (483)
                      |+|||||+|++|.+++... .+++..+..++.||+.||.|||++        +|+||||||+|||+   +.++.+||+||
T Consensus       111 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill---~~~~~~kl~Df  186 (337)
T 3mdy_A          111 YLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV---KKNGTCCIADL  186 (337)
T ss_dssp             EEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE---CTTSCEEECCC
T ss_pred             EEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE---CCCCCEEEEeC
Confidence            8999999999999999765 799999999999999999999999        99999999999999   67789999999


Q ss_pred             ccceeccCCcee-----cccccCCcccCccccCCCCCCCc------CchHHHHHHHHHHhhC----------CCCCCCCC
Q 048594          164 GLAFFFEEGKVY-----EEVVGTPLYMAPELLGPCKYGKE------IDIWSAGLILYNLLSG----------AQPFWAES  222 (483)
Q Consensus       164 g~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~------~DiwslGvil~~ll~g----------~~pf~~~~  222 (483)
                      |++.........     ....||+.|+|||++.+..+...      +|||||||++|+|++|          ..||....
T Consensus       187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~  266 (337)
T 3mdy_A          187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV  266 (337)
T ss_dssp             TTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhc
Confidence            999766433221     24579999999999987666655      8999999999999999          77775432


Q ss_pred             ----hHHHHHHHH-ccccCCCCCC---CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          223 ----LYGTLTAIM-SREIDFKSDP---WPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       223 ----~~~~~~~i~-~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                          ......... ........+.   ...+++++.++|.+||+.||.+|||+.++++|
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          267 PSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             CSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                122222222 2211111110   12456779999999999999999999999874

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.4e-36  Score=295.87  Aligned_cols=220  Identities=20%  Similarity=0.270  Sum_probs=179.6

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCC---CEEEEEEeccCCC--------------------------------CCcC
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTG---LQFACKSISKTSK--------------------------------SDEG   91 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~~avK~~~~~~~--------------------------------~~~~   91 (483)
                      -..+|.+.+.||+|+||+||+|.+..++   ..+|+|.+.....                                ....
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  102 (298)
T 3f66_A           23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP  102 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred             cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence            3457999999999999999999976443   4689999865321                                1122


Q ss_pred             eEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           92 YLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      |+|||||.+++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||.+....
T Consensus       103 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~a~~~~  179 (298)
T 3f66_A          103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMY  179 (298)
T ss_dssp             EEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSCGGGCCCS
T ss_pred             EEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---CCCCCEEECccccccccc
Confidence            8999999999999999764 568999999999999999999999999999999999999   677899999999998654


Q ss_pred             CCc-----eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCC
Q 048594          171 EGK-----VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       171 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  244 (483)
                      ...     ......+|+.|+|||.+.+..++.++|+||+|+++|+|++ |.+||.+.........+........   ...
T Consensus       180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  256 (298)
T 3f66_A          180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---PEY  256 (298)
T ss_dssp             CGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCC---CTT
T ss_pred             ccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCC---Ccc
Confidence            322     1223457788999999988889999999999999999999 6777777776666666665543322   245


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ++..+.++|.+||..||.+|||+.++++
T Consensus       257 ~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          257 CPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            7899999999999999999999999886

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=8e-37  Score=318.78  Aligned_cols=220  Identities=19%  Similarity=0.304  Sum_probs=187.0

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEec
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKREH   97 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E~   97 (483)
                      -..+|.+.+.||+|+||.||+|.++.++..||||++......                             ...|+||||
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~  297 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF  297 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence            356899999999999999999999999999999999765321                             122999999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      |.+|+|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++.........
T Consensus       298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~~~  374 (495)
T 1opk_A          298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLMTGDTYT  374 (495)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGGCEEECCTTCEECCTTCCEE
T ss_pred             cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE---CCCCcEEEeecccceeccCCcee
Confidence            9999999999864  468999999999999999999999999999999999999   56789999999999876543221


Q ss_pred             --cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          176 --EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       176 --~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                        ....+++.|+|||++....++.++|||||||++|+|++ |..||.+.........+.... .  ......+++.+.+|
T Consensus       375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~l~~l  451 (495)
T 1opk_A          375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-R--MERPEGCPEKVYEL  451 (495)
T ss_dssp             CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-C--CCCCTTCCHHHHHH
T ss_pred             ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-C--CCCCCCCCHHHHHH
Confidence              22345678999999988789999999999999999999 999999888777766665432 2  12235789999999


Q ss_pred             HHHhCccCCCCCCCHHHHHc
Q 048594          253 IRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~  272 (483)
                      |.+||+.||.+|||+.++++
T Consensus       452 i~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          452 MRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHcCcChhHCcCHHHHHH
Confidence            99999999999999999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=6.1e-37  Score=297.05  Aligned_cols=220  Identities=18%  Similarity=0.254  Sum_probs=176.2

Q ss_pred             ccceEEeeeecccCceeEEEEEECC-CCC--EEEEEEeccCCCC--------------------------------CcCe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENS-TGL--QFACKSISKTSKS--------------------------------DEGY   92 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~--~~avK~~~~~~~~--------------------------------~~~~   92 (483)
                      .++|++.+.||+|+||+||+|.+.. ++.  .||+|++......                                ...+
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   96 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK   96 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCce
Confidence            4689999999999999999998653 333  6899998754211                                1128


Q ss_pred             EEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           93 LKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +|+||+.+++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||++.   .++.+||+|||.+.....
T Consensus        97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~~~~~  173 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMRALPQ  173 (291)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECCCTTCEECCC
T ss_pred             eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEc---CCCCEEEccccccccccc
Confidence            999999999999999764 5799999999999999999999999999999999999994   556899999999987654


Q ss_pred             Cce----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          172 GKV----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       172 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ...    .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+.+.......+.......+.  ...++
T Consensus       174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~  251 (291)
T 1u46_A          174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR--PEDCP  251 (291)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC--CTTCC
T ss_pred             cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCC--CcCcC
Confidence            321    123457788999999988788999999999999999999 99999998888888887765544332  35789


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +++.++|.+||..||.+|||+.++++
T Consensus       252 ~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          252 QDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHH
Confidence            99999999999999999999999987

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=3e-36  Score=295.21  Aligned_cols=215  Identities=25%  Similarity=0.387  Sum_probs=171.2

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------------CCcCeEEEeccCCCC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------------SDEGYLKREHCDGGT  102 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------------~~~~~lv~E~~~g~~  102 (483)
                      ++|.+.+.||+|+||+||+|.+.  ++.||+|.+.....                          .+..|+|||||+|++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~   85 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGS   85 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCB
T ss_pred             hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCC
Confidence            57999999999999999999886  78999999965431                          112289999999999


Q ss_pred             hHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCCeeeCCCCCeEEEeeCCCCC-cEEEeecccceeccCCcee
Q 048594          103 LVDRISDRE---RYTERAAASVFRSVVNALHACHS---NGIMHRDLKPENFIFTTDDENA-TLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus       103 L~~~l~~~~---~l~~~~~~~i~~qil~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~-~ikl~Dfg~a~~~~~~~~~  175 (483)
                      |.+++....   .+++..+..++.||+.||.|||+   +||+||||||+||++.   ..+ .+||+|||.+......  .
T Consensus        86 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~---~~~~~~kl~Dfg~~~~~~~~--~  160 (307)
T 2eva_A           86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV---AGGTVLKICDFGTACDIQTH--M  160 (307)
T ss_dssp             HHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEE---TTTTEEEECCCCC----------
T ss_pred             HHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEe---CCCCEEEEcccccccccccc--c
Confidence            999998764   37899999999999999999999   8999999999999995   344 4899999999765432  2


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh--HHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL--YGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      ....||+.|+|||++.+..++.++||||||+++|+|++|..||.....  ......+.....   ....+.+++.+.++|
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li  237 (307)
T 2eva_A          161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR---PPLIKNLPKPIESLM  237 (307)
T ss_dssp             ----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC---CCCBTTCCHHHHHHH
T ss_pred             ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC---CCcccccCHHHHHHH
Confidence            345689999999999988899999999999999999999999975432  233333333221   222357899999999


Q ss_pred             HHhCccCCCCCCCHHHHHcC
Q 048594          254 RRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .+||..||.+|||+.+++++
T Consensus       238 ~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          238 TRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             HHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhcCChhhCcCHHHHHHH
Confidence            99999999999999999873

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.6e-36  Score=291.91  Aligned_cols=218  Identities=20%  Similarity=0.228  Sum_probs=178.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCC---EEEEEEeccCCCC-------------------------------Cc-CeE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGL---QFACKSISKTSKS-------------------------------DE-GYL   93 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~avK~~~~~~~~-------------------------------~~-~~l   93 (483)
                      ..|.+.+.||+|+||+||+|.+..++.   .+|+|.+......                               +. .|+
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  100 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV  100 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence            467788999999999999999765554   7999998753210                               11 189


Q ss_pred             EEeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |+||+.+++|.+++.. ...+++..+..++.||+.||.|||++|++||||||+||++   +.++.+||+|||++......
T Consensus       101 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~  177 (298)
T 3pls_A          101 LLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLARDILDR  177 (298)
T ss_dssp             EECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECCTTSSCTTTTG
T ss_pred             EEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCcEEeCcCCCcccccCC
Confidence            9999999999999987 4678999999999999999999999999999999999999   67789999999999765432


Q ss_pred             c-----eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhC-CCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          173 K-----VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG-AQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       173 ~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      .     ......+++.|+|||.+.+..++.++||||+|+++|+|++| .+||...........+......   .....++
T Consensus       178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  254 (298)
T 3pls_A          178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRL---PQPEYCP  254 (298)
T ss_dssp             GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCC---CCCTTCC
T ss_pred             cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCC---CCCccch
Confidence            1     22335678899999999988899999999999999999994 5555555666666665554322   1234678


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.+.++|.+||..||.+|||+.++++
T Consensus       255 ~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          255 DSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999999999999999876

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-36  Score=305.31  Aligned_cols=219  Identities=20%  Similarity=0.278  Sum_probs=172.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCC---CEEEEEEeccCCC--------------------------------CCcCeE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTG---LQFACKSISKTSK--------------------------------SDEGYL   93 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~---~~~avK~~~~~~~--------------------------------~~~~~l   93 (483)
                      ..|.+.+.||+|+||+||+|.+..++   ..+|+|.+.....                                ....|+
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l  168 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  168 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence            46899999999999999999976443   4689999865321                                112289


Q ss_pred             EEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |||||.+++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......
T Consensus       169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~~~~  245 (373)
T 3c1x_A          169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDK  245 (373)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC---------
T ss_pred             EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE---CCCCCEEEeecccccccccc
Confidence            99999999999999865 468999999999999999999999999999999999999   67789999999999865432


Q ss_pred             ce-----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          173 KV-----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       173 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ..     .....+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.+....+....+..+.....   ...++
T Consensus       246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~---p~~~~  322 (373)
T 3c1x_A          246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---PEYCP  322 (373)
T ss_dssp             ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCC---CTTCC
T ss_pred             ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCC---CCCCC
Confidence            21     123456788999999988889999999999999999999 7888887776666666665543222   24678


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ..+.++|.+||..||.+|||+.+++++
T Consensus       323 ~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          323 DPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999999999874

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=2.5e-36  Score=311.62  Aligned_cols=225  Identities=20%  Similarity=0.279  Sum_probs=183.9

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------CcCeEEEec
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------DEGYLKREH   97 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------~~~~lv~E~   97 (483)
                      .-.++|.+.+.||+|+||.||+|.++. +..||||++......                            ...|+||||
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~  259 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEY  259 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehh
Confidence            335789999999999999999999975 467999999764321                            122999999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      |.+|+|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++........ 
T Consensus       260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~~~  336 (452)
T 1fmk_A          260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDNEYT  336 (452)
T ss_dssp             CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCTTC--------
T ss_pred             hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEE---CCCCCEEECCCccceecCCCcee
Confidence            9999999999743  569999999999999999999999999999999999999   5677999999999987643321 


Q ss_pred             -ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          175 -YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       175 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                       .....+++.|+|||.+....++.++|||||||++|+|++ |..||.+....+....+..+..   .+..+.+|+.+.++
T Consensus       337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~l  413 (452)
T 1fmk_A          337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR---MPCPPECPESLHDL  413 (452)
T ss_dssp             ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC---CCCCTTSCHHHHHH
T ss_pred             cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHH
Confidence             123456788999999988889999999999999999999 9999999888888777765432   12235789999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcC--CcCC
Q 048594          253 IRRMLIRDPNNQITVAQILKH--PWLN  277 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h--~~~~  277 (483)
                      |.+||..||.+|||++++++.  .++.
T Consensus       414 i~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          414 MCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            999999999999999999873  5554

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.1e-36  Score=299.90  Aligned_cols=221  Identities=21%  Similarity=0.287  Sum_probs=176.0

Q ss_pred             ccccce-EEeeeecccCceeEEEEE----ECCCCCEEEEEEeccCCCC--------------------------------
Q 048594           46 DIKLHF-TIAEELCRGESGRIYLCT----ENSTGLQFACKSISKTSKS--------------------------------   88 (483)
Q Consensus        46 ~i~~~y-~~~~~lg~G~~g~V~~~~----~~~~~~~~avK~~~~~~~~--------------------------------   88 (483)
                      .+.++| ++++.||+|+||+||+|.    +..+|+.||||++......                                
T Consensus        27 ~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (318)
T 3lxp_A           27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG  106 (318)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             eecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC
Confidence            355556 999999999999998875    4457899999999764310                                


Q ss_pred             -CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           89 -DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                       ...|+|||||++++|.+++... .+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||.+.
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~a~  182 (318)
T 3lxp_A          107 AASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGLAK  182 (318)
T ss_dssp             TTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGGGCE
T ss_pred             CceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---cCCCCEEECCccccc
Confidence             1128999999999999999775 59999999999999999999999999999999999999   677899999999998


Q ss_pred             eccCCce----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHH--------------HHHH
Q 048594          168 FFEEGKV----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG--------------TLTA  229 (483)
Q Consensus       168 ~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~--------------~~~~  229 (483)
                      .......    .....+|+.|+|||++.+..++.++||||||+++|+|++|..||.......              ....
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (318)
T 3lxp_A          183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE  262 (318)
T ss_dssp             ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred             cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence            7754332    233467888999999988788999999999999999999999996532210              1111


Q ss_pred             HHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          230 IMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       230 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      ......  ..+....+++++.+||.+||..||.+|||+.++++
T Consensus       263 ~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          263 LLERGE--RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhccc--CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            111111  12223568999999999999999999999999985

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=2.7e-37  Score=306.41  Aligned_cols=216  Identities=18%  Similarity=0.213  Sum_probs=171.7

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------------   87 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------------   87 (483)
                      .++|.+.+.||+|+||+||+|++  +|+.||||++.....                                        
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            35799999999999999999998  689999999975421                                        


Q ss_pred             -------------------------------------CCcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 048594           88 -------------------------------------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALH  130 (483)
Q Consensus        88 -------------------------------------~~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~  130 (483)
                                                           ....|+|||||.+|++.+.+.+ ..+++..++.++.||+.||.
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~  175 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLA  175 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHH
Confidence                                                 2345999999999988887755 57899999999999999999


Q ss_pred             HHH-HCCCeeeCCCCCeEEEeeCC-----------------CCCcEEEeecccceeccCCceecccccCCcccCccccCC
Q 048594          131 ACH-SNGIMHRDLKPENFIFTTDD-----------------ENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP  192 (483)
Q Consensus       131 ~LH-~~~ivH~dlkp~NIll~~~~-----------------~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  192 (483)
                      ||| ++||+||||||+|||+..++                 ....+||+|||+|+.....    ..+||+.|+|||++.+
T Consensus       176 ~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~g  251 (336)
T 2vuw_A          176 VAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLFTG  251 (336)
T ss_dssp             HHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGGGCC
T ss_pred             HHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChhhhcC
Confidence            999 99999999999999997543                 1238999999999877543    3479999999999987


Q ss_pred             CCCCCcCchHHHHHH-HHHHhhCCCCCCCCCh-HHHHHHHHccccCCCCC----CCCCCCHHHHHHHHHhCccCCCCCCC
Q 048594          193 CKYGKEIDIWSAGLI-LYNLLSGAQPFWAESL-YGTLTAIMSREIDFKSD----PWPTISSSAKDLIRRMLIRDPNNQIT  266 (483)
Q Consensus       193 ~~~~~~~DiwslGvi-l~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~t  266 (483)
                      .. +.++||||+|++ .+++++|..||.+... ......+.... .+...    .++.+++++++||.+||++|     |
T Consensus       252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----s  324 (336)
T 2vuw_A          252 DG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQM-TFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----S  324 (336)
T ss_dssp             CS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTC-CCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----S
T ss_pred             CC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhh-ccCcccchhhhhhcCHHHHHHHHHHhccC-----C
Confidence            55 889999998766 7788999999843211 11222333211 11111    12357889999999999977     9


Q ss_pred             HHHHH-cCCcCC
Q 048594          267 VAQIL-KHPWLN  277 (483)
Q Consensus       267 ~~e~L-~h~~~~  277 (483)
                      ++|+| +||||+
T Consensus       325 a~e~l~~Hp~f~  336 (336)
T 2vuw_A          325 ATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHHCGGGC
T ss_pred             HHHHHhcCCCcC
Confidence            99999 999995

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1.2e-35  Score=291.84  Aligned_cols=218  Identities=19%  Similarity=0.271  Sum_probs=178.2

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------CeE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GYL   93 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~l   93 (483)
                      .-.++|.+.+.||+|+||.||+|.++.   .+|+|++........                                .|+
T Consensus        30 i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i  106 (319)
T 2y4i_B           30 IPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI  106 (319)
T ss_dssp             SCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred             CCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence            345789999999999999999999864   499999876432111                                199


Q ss_pred             EEeccCCCChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-
Q 048594           94 KREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-  171 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-  171 (483)
                      |+|||.|++|.+++...+ .+++..+..++.||+.||.|||++|++||||||+||++.    ++.++|+|||++..... 
T Consensus       107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~----~~~~~l~Dfg~~~~~~~~  182 (319)
T 2y4i_B          107 ITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD----NGKVVITDFGLFSISGVL  182 (319)
T ss_dssp             ECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------CCEECCCSCCC-----
T ss_pred             EeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe----CCCEEEeecCCccccccc
Confidence            999999999999998754 799999999999999999999999999999999999993    46899999999865431 


Q ss_pred             -----CceecccccCCcccCccccCC---------CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCC
Q 048594          172 -----GKVYEEVVGTPLYMAPELLGP---------CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDF  237 (483)
Q Consensus       172 -----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  237 (483)
                           ........|++.|+|||++.+         ..++.++||||||+++|+|++|..||...........+.......
T Consensus       183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~  262 (319)
T 2y4i_B          183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPN  262 (319)
T ss_dssp             -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCC
T ss_pred             cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCC
Confidence                 112233468999999999864         346889999999999999999999999888877777766553322


Q ss_pred             CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          238 KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       238 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                        .....++.++.++|.+||..||.+|||+.++++
T Consensus       263 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          263 --LSQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             --CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             --CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence              222367889999999999999999999999987

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1e-35  Score=318.69  Aligned_cols=217  Identities=18%  Similarity=0.229  Sum_probs=179.7

Q ss_pred             ceEE-eeeecccCceeEEEEEE--CCCCCEEEEEEeccCCCCC-------------------------------cCeEEE
Q 048594           50 HFTI-AEELCRGESGRIYLCTE--NSTGLQFACKSISKTSKSD-------------------------------EGYLKR   95 (483)
Q Consensus        50 ~y~~-~~~lg~G~~g~V~~~~~--~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~   95 (483)
                      .+.+ .+.||+|+||+||+|.+  +.+++.||||++.......                               ..|+||
T Consensus       369 ~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~  448 (635)
T 4fl3_A          369 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVM  448 (635)
T ss_dssp             GEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEE
T ss_pred             hccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEE
Confidence            3444 34799999999999954  5677899999997643211                               118999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      |||.+++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||++..+..... 
T Consensus       449 E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~---~~~~~kL~DFGla~~~~~~~~~  525 (635)
T 4fl3_A          449 EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENY  525 (635)
T ss_dssp             ECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCTTHHHHTTC----
T ss_pred             EccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEe---CCCCEEEEEcCCccccccCccc
Confidence            9999999999999988999999999999999999999999999999999999994   566899999999987643321 


Q ss_pred             ---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          175 ---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       175 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                         .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.........+..+...   .....+++++.
T Consensus       526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~l~  602 (635)
T 4fl3_A          526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPAGCPREMY  602 (635)
T ss_dssp             ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHHHH
T ss_pred             cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHHHH
Confidence               223356788999999988889999999999999999998 99999998888888777765432   12246899999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHc
Q 048594          251 DLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +||.+||..||.+|||++++++
T Consensus       603 ~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          603 DLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHH
Confidence            9999999999999999999875

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.2e-35  Score=315.32  Aligned_cols=219  Identities=19%  Similarity=0.249  Sum_probs=178.7

Q ss_pred             ccceEEee-eecccCceeEEEEEEC--CCCCEEEEEEeccCCCCC------------------------------cCeEE
Q 048594           48 KLHFTIAE-ELCRGESGRIYLCTEN--STGLQFACKSISKTSKSD------------------------------EGYLK   94 (483)
Q Consensus        48 ~~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~~------------------------------~~~lv   94 (483)
                      .+.+.+.+ .||+|+||.||+|.++  .++..||||++.......                              ..|+|
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv  413 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV  413 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEE
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEE
Confidence            44566666 8999999999999876  356679999997653211                              11899


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ||||.||+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||++   .++.+||+|||++..+....
T Consensus       414 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~---~~~~vkL~DFGla~~~~~~~  490 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLV---NRHYAKISDFGLSKALGADD  490 (613)
T ss_dssp             EECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCSTTTTCC---
T ss_pred             EEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEc---CCCcEEEeeccCcccccCCC
Confidence            9999999999999754 5699999999999999999999999999999999999994   56789999999998764322


Q ss_pred             e----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHH
Q 048594          174 V----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS  248 (483)
Q Consensus       174 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (483)
                      .    .....+++.|+|||++.+..++.++|||||||++|+|++ |..||.+....+....+..+...   ...+.++++
T Consensus       491 ~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~  567 (613)
T 2ozo_A          491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPECPPE  567 (613)
T ss_dssp             -----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCC---CCCTTCCHH
T ss_pred             ceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCCcCCHH
Confidence            1    112345688999999988889999999999999999998 99999998888888777765421   222468999


Q ss_pred             HHHHHHHhCccCCCCCCCHHHHHc
Q 048594          249 AKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       249 ~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.++|.+||..||.+|||+.++++
T Consensus       568 l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          568 LYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999998754

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=2.6e-36  Score=299.65  Aligned_cols=223  Identities=22%  Similarity=0.305  Sum_probs=177.5

Q ss_pred             cccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-----------------------------CC----cC
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-----------------------------SD----EG   91 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----------------------------~~----~~   91 (483)
                      ..+.++|.+.+.||+|+||.||+|.+  +|+.||||++.....                             ..    ..
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~  115 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL  115 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence            46678999999999999999999998  489999999865320                             01    23


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeeeCCCCCeEEEeeCCCCCcEEEeec
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACH--------SNGIMHRDLKPENFIFTTDDENATLKATDF  163 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH--------~~~ivH~dlkp~NIll~~~~~~~~ikl~Df  163 (483)
                      |+|||||.+++|.+++... ++++..+..++.||+.||.|||        +.+|+||||||+||++   +.++.+||+||
T Consensus       116 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Df  191 (342)
T 1b6c_B          116 WLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADL  191 (342)
T ss_dssp             EEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE---CTTSCEEECCC
T ss_pred             EEEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE---CCCCCEEEEEC
Confidence            8999999999999999764 7999999999999999999999        8999999999999999   66789999999


Q ss_pred             ccceeccCCce-----ecccccCCcccCccccCCCC------CCCcCchHHHHHHHHHHhhC----------CCCCCCCC
Q 048594          164 GLAFFFEEGKV-----YEEVVGTPLYMAPELLGPCK------YGKEIDIWSAGLILYNLLSG----------AQPFWAES  222 (483)
Q Consensus       164 g~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~------~~~~~DiwslGvil~~ll~g----------~~pf~~~~  222 (483)
                      |++........     .....||+.|+|||++.+..      ++.++|||||||++|+|++|          ..||....
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~  271 (342)
T 1b6c_B          192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV  271 (342)
T ss_dssp             TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence            99987654431     23457899999999997652      23689999999999999999          78986642


Q ss_pred             -----hHHHHHHHHccccCCCCCC---CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          223 -----LYGTLTAIMSREIDFKSDP---WPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       223 -----~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                           .......+.........+.   ....+..+.++|.+||..||.+|||+.++++|
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          272 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             CSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             cCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence                 2333333333322211110   01234679999999999999999999999874

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=8.2e-36  Score=294.53  Aligned_cols=221  Identities=19%  Similarity=0.259  Sum_probs=178.1

Q ss_pred             ccccceEEeeeecccCceeEEEEE----ECCCCCEEEEEEeccCCCC--------------------------------C
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCT----ENSTGLQFACKSISKTSKS--------------------------------D   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~~avK~~~~~~~~--------------------------------~   89 (483)
                      -...+|++++.||+|+||.||+|.    +..+|+.||+|++......                                .
T Consensus        38 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  117 (326)
T 2w1i_A           38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR  117 (326)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred             cCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence            345689999999999999999998    5678999999998764310                                1


Q ss_pred             cCeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           90 EGYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      ..|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++.   .++.+||+|||++..
T Consensus       118 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~---~~~~~kL~Dfg~~~~  194 (326)
T 2w1i_A          118 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGLTKV  194 (326)
T ss_dssp             CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECCCTTCEE
T ss_pred             ceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEc---CCCcEEEecCcchhh
Confidence            228999999999999999875 4699999999999999999999999999999999999994   567899999999987


Q ss_pred             ccCCce----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH----------------HHHH
Q 048594          169 FEEGKV----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY----------------GTLT  228 (483)
Q Consensus       169 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~----------------~~~~  228 (483)
                      ......    .....+++.|+|||.+.+..++.++||||||+++|+|++|..||......                ....
T Consensus       195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (326)
T 2w1i_A          195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  274 (326)
T ss_dssp             CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence            654322    12235677899999998878899999999999999999999998542110                1111


Q ss_pred             HHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          229 AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       229 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+... ..  .+..+.+++++.++|.+||..||.+|||+.++++
T Consensus       275 ~~~~~-~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          275 LLKNN-GR--LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHTT-CC--CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HhhcC-CC--CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            11111 11  1223568999999999999999999999999875

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.2e-35  Score=290.34  Aligned_cols=217  Identities=24%  Similarity=0.292  Sum_probs=171.2

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------------CcCeEEEe
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------------DEGYLKRE   96 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------------~~~~lv~E   96 (483)
                      |...+.||+|+||.||+|.+  ++..+|+|.+......                                  ...|+|||
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  110 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV  110 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEE
Confidence            44458999999999999986  5889999998754211                                  11199999


Q ss_pred             ccCCCChHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           97 HCDGGTLVDRISD---RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        97 ~~~g~~L~~~l~~---~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |++|++|.+++..   ..++++..+..++.||+.||.|||++|++||||||+||++   +.++.+||+|||.+.......
T Consensus       111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~  187 (307)
T 2nru_A          111 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFA  187 (307)
T ss_dssp             CCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCSCS
T ss_pred             ecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE---cCCCcEEEeeccccccccccc
Confidence            9999999999873   3569999999999999999999999999999999999999   677899999999998764322


Q ss_pred             ---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHH----HHHHccccC-------CCC
Q 048594          174 ---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTL----TAIMSREID-------FKS  239 (483)
Q Consensus       174 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~----~~i~~~~~~-------~~~  239 (483)
                         ......||+.|+|||.+.+ .++.++||||||+++|+|++|..||.........    ..+......       ...
T Consensus       188 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (307)
T 2nru_A          188 QTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN  266 (307)
T ss_dssp             SCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCS
T ss_pred             ccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccccc
Confidence               1234578999999999876 5889999999999999999999999765433221    222211110       001


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       240 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ...+..+..+.++|.+||..||.+|||+.+++++
T Consensus       267 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          267 DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            1112345678999999999999999999999863

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.4e-35  Score=312.15  Aligned_cols=225  Identities=20%  Similarity=0.283  Sum_probs=187.8

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------CcCeEEEec
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------DEGYLKREH   97 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------~~~~lv~E~   97 (483)
                      .-.++|.+.+.||+|+||.||+|.++. +..||||++......                            ...||||||
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~  342 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEY  342 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             cchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeeh
Confidence            345789999999999999999999975 467999999764321                            122999999


Q ss_pred             cCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce-
Q 048594           98 CDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV-  174 (483)
Q Consensus        98 ~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~-  174 (483)
                      |.+++|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++........ 
T Consensus       343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~~~  419 (535)
T 2h8h_A          343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDNEYT  419 (535)
T ss_dssp             CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCTTSTTTCCCHHHH
T ss_pred             hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---cCCCcEEEcccccceecCCCcee
Confidence            9999999999743  569999999999999999999999999999999999999   5677899999999986543211 


Q ss_pred             -ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          175 -YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       175 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                       .....++..|+|||++....++.++|||||||++|+|++ |..||.+....+....+..+.. .  +..+.++..+.+|
T Consensus       420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~-~--~~~~~~~~~l~~l  496 (535)
T 2h8h_A          420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-M--PCPPECPESLHDL  496 (535)
T ss_dssp             TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCC-C--CCCTTCCHHHHHH
T ss_pred             cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-C--CCCCCCCHHHHHH
Confidence             122346778999999988889999999999999999999 9999999888888777765432 1  2234688999999


Q ss_pred             HHHhCccCCCCCCCHHHHHcC--CcCC
Q 048594          253 IRRMLIRDPNNQITVAQILKH--PWLN  277 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h--~~~~  277 (483)
                      |.+||..||.+|||+.++++.  .++.
T Consensus       497 i~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          497 MCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             HHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            999999999999999999874  5554

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=5.9e-35  Score=313.99  Aligned_cols=223  Identities=20%  Similarity=0.290  Sum_probs=184.5

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCC---CCEEEEEEeccCCC------------------------------CCc
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENST---GLQFACKSISKTSK------------------------------SDE   90 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~avK~~~~~~~------------------------------~~~   90 (483)
                      .+...++|.+.+.||+|+||.||+|.+..+   +..+|+|.+.....                              ...
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~  464 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP  464 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCc
Confidence            344467899999999999999999998654   46799999865321                              112


Q ss_pred             CeEEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceec
Q 048594           91 GYLKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF  169 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~  169 (483)
                      .|+|||||.+++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||++...
T Consensus       465 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~---~~~~vkL~DFG~a~~~  541 (656)
T 2j0j_A          465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYM  541 (656)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCCCCCSC
T ss_pred             eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEe---CCCCEEEEecCCCeec
Confidence            29999999999999999865 4799999999999999999999999999999999999994   5678999999999876


Q ss_pred             cCCcee--cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          170 EEGKVY--EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       170 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ......  ....+|+.|+|||++.+..++.++||||+||++|+|++ |..||.+....+....+..+...   +..+.++
T Consensus       542 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~---~~~~~~~  618 (656)
T 2j0j_A          542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPNCP  618 (656)
T ss_dssp             CC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCC---CCCTTCC
T ss_pred             CCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC---CCCcccc
Confidence            543221  23456789999999988889999999999999999997 99999998888888777665422   1235789


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.+.++|.+||..||.+|||+.++++
T Consensus       619 ~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          619 PTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999999999876

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=2.9e-34  Score=278.26  Aligned_cols=195  Identities=15%  Similarity=0.103  Sum_probs=156.5

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc---------------------------------Ce
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE---------------------------------GY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~---------------------------------~~   92 (483)
                      .+.++|.+.+.||+|+||.||+|.+..+|+.||||++........                                 .|
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  107 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL  107 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence            466789999999999999999999999999999999987643221                                 19


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|||||+|++|.+++...  .....+..++.||+.||.|||++||+||||||+|||+   +.++.+||++++        
T Consensus       108 lv~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll---~~~g~~kl~~~~--------  174 (286)
T 3uqc_A          108 VVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRV---SIDGDVVLAYPA--------  174 (286)
T ss_dssp             EEEECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---ETTSCEEECSCC--------
T ss_pred             EEEEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEE---cCCCCEEEEecc--------
Confidence            999999999999999643  4566788999999999999999999999999999999   466788887433        


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHH---HHHccccCCCCCCCCCCCHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLT---AIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~  249 (483)
                                 |++       .++.++|||||||++|+|++|..||.+.+....+.   .........+....+.+++++
T Consensus       175 -----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  236 (286)
T 3uqc_A          175 -----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQI  236 (286)
T ss_dssp             -----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHH
T ss_pred             -----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHH
Confidence                       333       36789999999999999999999998765432111   001111111111235789999


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHc
Q 048594          250 KDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .++|.+||++||.+| |+.++++
T Consensus       237 ~~li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          237 SAVAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             HHHHHHHHCTTSSCC-CHHHHHH
T ss_pred             HHHHHHHcccCCccC-CHHHHHH
Confidence            999999999999999 9999987

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.6e-34  Score=312.99  Aligned_cols=213  Identities=24%  Similarity=0.345  Sum_probs=172.5

Q ss_pred             cccccceEEeeeecccCceeEEEEEECC-CCCEEEEEEeccCCC-------------------------------CCc--
Q 048594           45 EDIKLHFTIAEELCRGESGRIYLCTENS-TGLQFACKSISKTSK-------------------------------SDE--   90 (483)
Q Consensus        45 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~-------------------------------~~~--   90 (483)
                      +.+.++|.+.+.||+|+||+||+|.++. +|+.||||++.....                               ...  
T Consensus        76 ~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  155 (681)
T 2pzi_A           76 DIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG  155 (681)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred             CEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence            4567899999999999999999999986 789999999864321                               001  


Q ss_pred             ---CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           91 ---GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        91 ---~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                         .|+|||||+|++|.+++..  ++++..+..++.||+.||.|||++||+||||||+|||++   . +.+||+|||++.
T Consensus       156 ~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~---~-~~~kl~DFG~a~  229 (681)
T 2pzi_A          156 DPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT---E-EQLKLIDLGAVS  229 (681)
T ss_dssp             CEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---S-SCEEECCCTTCE
T ss_pred             CceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEe---C-CcEEEEecccch
Confidence               2899999999999998765  799999999999999999999999999999999999994   3 389999999998


Q ss_pred             eccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      .....   ...+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....         ... ...+....++
T Consensus       230 ~~~~~---~~~~gt~~y~aPE~~~~-~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~---------~~~-~~~~~~~~~~  295 (681)
T 2pzi_A          230 RINSF---GYLYGTPGFQAPEIVRT-GPTVATDIYTVGRTLAALTLDLPTRNGRYVD---------GLP-EDDPVLKTYD  295 (681)
T ss_dssp             ETTCC---SCCCCCTTTSCTTHHHH-CSCHHHHHHHHHHHHHHHHSCCCEETTEECS---------SCC-TTCHHHHHCH
T ss_pred             hcccC---CccCCCccccCHHHHcC-CCCCceehhhhHHHHHHHHhCCCCCcccccc---------ccc-ccccccccCH
Confidence            76543   34579999999999876 4588999999999999999999998652210         000 0111112467


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .+.++|.+||.+||.+||+..+++.|+|+.
T Consensus       296 ~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          296 SYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             HHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            899999999999999999999988888764

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.93  E-value=7.1e-28  Score=254.44  Aligned_cols=198  Identities=17%  Similarity=0.185  Sum_probs=126.8

Q ss_pred             eeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------------------cCeE
Q 048594           55 EELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------------------EGYL   93 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------------------~~~l   93 (483)
                      ...+.|+.|.+..++...+|+.||||++.+.....                                         ..||
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL  319 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL  319 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence            34678888888888888899999999997653211                                         1199


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-  172 (483)
                      |||||+|++|.++|...+++++.   .|+.||+.||+|||++|||||||||+|||+   +.++.+||+|||+|+..... 
T Consensus       320 VMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL---~~dg~vKL~DFGlAr~~~~~~  393 (569)
T 4azs_A          320 VMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMV---DARQHARLIDFGSIVTTPQDC  393 (569)
T ss_dssp             EEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEE---CTTSCEEECCCTTEESCC---
T ss_pred             EEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEE---CCCCCEEEeecccCeeCCCCC
Confidence            99999999999999999999875   478999999999999999999999999999   67789999999999876533 


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL  252 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  252 (483)
                      ......+||+.|+|||++.+ .+...+|+||+|++++.+.++..|+        ...+...    +..     ...+..+
T Consensus       394 ~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~--------~~~l~~~----~~~-----~~~~~~l  455 (569)
T 4azs_A          394 SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW--------LYAVWQE----PVE-----RWNFVLL  455 (569)
T ss_dssp             CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH--------HHHHHTS----CGG-----GCSHHHH
T ss_pred             ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh--------HHHhhcC----CCC-----CCcHHHH
Confidence            33456789999999999987 5677899999999988887665443        1111111    100     1124455


Q ss_pred             HHHhCccCCCCCCCHHHHHcCCcC
Q 048594          253 IRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       253 i~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      ...++..+|..|+.......|+|.
T Consensus       456 ~~~l~~~~~~~~~~~~~~~~~~~~  479 (569)
T 4azs_A          456 LALFEKKAKLPSAEQQRGATEQWI  479 (569)
T ss_dssp             HHHHHTGGGSCCGGGSSCCHHHHH
T ss_pred             HHHHhCCCCCCCCChhhhccchhH
Confidence            666666777766665554444443

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.91  E-value=2e-24  Score=197.14  Aligned_cols=177  Identities=26%  Similarity=0.387  Sum_probs=141.3

Q ss_pred             cCCcCCCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHhhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHh
Q 048594          272 KHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSK  351 (483)
Q Consensus       272 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~l~~i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~  351 (483)
                      .|||.+..  .+...|+....+.++++|...+++++.++..++..++.+++..++++|..+|.|++|+|+.+||..+++.
T Consensus         8 ~~~~~~~~--~~~~~~l~~~~~~~l~~f~~~~~lk~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~   85 (197)
T 3pm8_A            8 SSGRENLY--FQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKK   85 (197)
T ss_dssp             -----------CCSCCCCTTHHHHHHHTTTSCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             cchHhhhc--cCCCCCCCHHHHHHHHHHHHccHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            48999733  3556778888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHhccCCCCCceeechhh---------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhh
Q 048594          352 LGSTLTEVDVKQYMQAADIDGNGTTLNLSLV---------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE  422 (483)
Q Consensus       352 ~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~  422 (483)
                      +|..+++.++..+|..+|.+++|.+....++         ...+.+..+|+.||.|+        +|+|+.+||++++..
T Consensus        86 ~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~--------~G~Is~~El~~~l~~  157 (197)
T 3pm8_A           86 IGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDG--------NGKISVEELKRIFGR  157 (197)
T ss_dssp             HC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTC--------SSEECHHHHHHHHC-
T ss_pred             hCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCC--------CCCCCHHHHHHHHHh
Confidence            9999999999999999999999984433332         34678899999999999        999999999999999


Q ss_pred             C--CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          423 Y--NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       423 ~--~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      +  |.. ++++++.++..+|.|+||.|+|+||+.+|+.+
T Consensus       158 ~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~  196 (197)
T 3pm8_A          158 DDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSKK  196 (197)
T ss_dssp             ---CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHCC
T ss_pred             cccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHcC
Confidence            8  666 88999999999999999999999999999765

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.90  E-value=1.8e-23  Score=187.25  Aligned_cols=137  Identities=27%  Similarity=0.484  Sum_probs=125.0

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------hc
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------QC  384 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~~  384 (483)
                      ..++++++.+++++|..+|+|++|+|+.+||..+++.+|.++++.++..++..+|.+++|.+....+.          ..
T Consensus         3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~   82 (176)
T 2lhi_A            3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS   82 (176)
T ss_dssp             CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHH
T ss_pred             CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCc
Confidence            56889999999999999999999999999999999999999999999999999999999984332222          23


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTH  460 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~  460 (483)
                      .+.+..+|+.||+|+        +|+|+.+||+++|..+|.. +++++++++.++| |+||.|+|+||+.+|+.++.
T Consensus        83 ~~~l~~aF~~fD~d~--------~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k~~~  150 (176)
T 2lhi_A           83 EQELLEAFKVFDKNG--------DGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSKGSS  150 (176)
T ss_dssp             HHHHHHHHHHHCSSC--------SSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTCCSS
T ss_pred             HHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHhcCC
Confidence            577999999999999        9999999999999999998 9999999999999 99999999999999987654

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.90  E-value=3.9e-23  Score=187.60  Aligned_cols=174  Identities=24%  Similarity=0.380  Sum_probs=145.1

Q ss_pred             cCCcCCCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHhhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHh
Q 048594          272 KHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSK  351 (483)
Q Consensus       272 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~l~~i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~  351 (483)
                      .|||+.  .......|+....+.++++|...+++++.++..++..++.+++..++++|..+|.|++|+|+.+||..+++.
T Consensus         3 ~~~~~~--~~~~~~~~l~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~   80 (191)
T 3k21_A            3 HHHHHS--SGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK   80 (191)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             CCcccc--CCccccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence            577775  223444566678889999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHhccCCCCCceeechhh--------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC
Q 048594          352 LGSTLTEVDVKQYMQAADIDGNGTTLNLSLV--------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       352 ~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~--------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                      +|..++ .++..+|..+|.+++|.+....+.        ...+.+..+|+.||.|+        +|+|+.+||+.++...
T Consensus        81 ~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~l~~~F~~~D~d~--------~G~Is~~El~~~l~~~  151 (191)
T 3k21_A           81 DGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCAFRVFDVDN--------DGEITTAELAHILYNG  151 (191)
T ss_dssp             TTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHHHHHHHHHHSTTC--------SSCBCHHHHHHHHHHS
T ss_pred             cCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHHHHHHHHHhCCCC--------CCcCCHHHHHHHHHhc
Confidence            999888 889999999999999984433322        23577899999999999        9999999999999884


Q ss_pred             --CCC-Ch---HHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          424 --NMG-DD---ATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       424 --~~~-~~---~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                        +.. ++   +++.+++..+|.|+||.|+|+||+.+|+
T Consensus       152 ~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~  190 (191)
T 3k21_A          152 NKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK  190 (191)
T ss_dssp             SSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred             CCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence              433 44   4689999999999999999999999985

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.88  E-value=1.1e-22  Score=176.77  Aligned_cols=134  Identities=26%  Similarity=0.434  Sum_probs=122.6

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh----------hhch
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL----------VQCK  385 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~----------~~~~  385 (483)
                      .++++++.+++++|+.+|+|++|+|+.+||..+++.+|.++++.++..++..+|.+++|.+....+          ....
T Consensus         3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~   82 (148)
T 2lmt_A            3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTE   82 (148)
T ss_dssp             SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcH
Confidence            478899999999999999999999999999999999999999999999999999999998333222          2235


Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +.++.+|+.||+|+        +|+|+.+||+.+|..+|.. +++++++++..+|.|+||.|+|+||+.+|..
T Consensus        83 ~~l~~aF~~~D~d~--------~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~  147 (148)
T 2lmt_A           83 EEMREAFKIFDRDG--------DGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ  147 (148)
T ss_dssp             HHHHHHHHHHHSSC--------SSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCCC--------cCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            77999999999999        9999999999999999999 9999999999999999999999999999864

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.87  E-value=7.4e-22  Score=172.45  Aligned_cols=136  Identities=17%  Similarity=0.278  Sum_probs=118.8

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCce------eechhhhchhHHH
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT------LNLSLVQCKDTSL  389 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~------~~~~~~~~~~~~~  389 (483)
                      .++++++.+++++|+.+|+|++|+|+.+||..+|+.+|.++++.++..++...+..-+...      .........+.++
T Consensus         9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~   88 (153)
T 3i5g_B            9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDALR   88 (153)
T ss_dssp             TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHHTSSSCCCSHHHHHTTTTTTTTCCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHHhccCCccHHHHHHHHHhhhcccccHHHHH
Confidence            4789999999999999999999999999999999999999999999999887665444330      0111223467899


Q ss_pred             HHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCC
Q 048594          390 KDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTH  460 (483)
Q Consensus       390 ~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~  460 (483)
                      .+|+.||++|        +|+|+.+||+++|..+|.+ +++++++|+..+|.| ||.|+|+||+++|+.+..
T Consensus        89 ~aF~~fD~d~--------~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~~~  151 (153)
T 3i5g_B           89 NAFSMFDEDG--------QGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKAED  151 (153)
T ss_dssp             HHHHTTCSSC--------SSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHCSCC
T ss_pred             HHHhccccCC--------CCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCCCC
Confidence            9999999999        9999999999999999998 999999999999988 999999999999987643

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.86  E-value=5.5e-22  Score=174.48  Aligned_cols=135  Identities=22%  Similarity=0.313  Sum_probs=118.1

Q ss_pred             ccchHHHhhHHHHHhhcCC--CCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh-----------
Q 048594          316 NLPAEEIQKHKETFKQMDT--NDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV-----------  382 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~--d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~-----------  382 (483)
                      +++++++.+++++|..||.  |++|+|+..||..+|+.+|.++++.++..++. .|.+++|.+....++           
T Consensus         2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~   80 (159)
T 3i5g_C            2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDT   80 (159)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred             CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccc
Confidence            5789999999999999995  89999999999999999999999999998865 466677763322222           


Q ss_pred             -hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcC--CCCCcccHHHHHHHHHcC
Q 048594          383 -QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDR--DKDGRISYEEFCATMKTG  458 (483)
Q Consensus       383 -~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~--~~~g~i~~~ef~~~~~~~  458 (483)
                       ...+.++.+|+.||+++        +|+|+.+||+++|..+|.+ +++++++++..+|.  |+||.|+|+||+++|..+
T Consensus        81 ~~~~~~l~~aF~~fD~d~--------~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~  152 (159)
T 3i5g_C           81 GTAADEFMEAFKTFDREG--------QGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG  152 (159)
T ss_dssp             TCCHHHHHHHHHHHCTTS--------SSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHHC
T ss_pred             cchHHHHHHHHHHHhcCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHCC
Confidence             23567999999999999        9999999999999999999 99999999999996  889999999999998876


Q ss_pred             C
Q 048594          459 T  459 (483)
Q Consensus       459 ~  459 (483)
                      .
T Consensus       153 p  153 (159)
T 3i5g_C          153 P  153 (159)
T ss_dssp             S
T ss_pred             C
Confidence            5

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.86  E-value=1.9e-21  Score=191.32  Aligned_cols=137  Identities=29%  Similarity=0.506  Sum_probs=124.4

Q ss_pred             hhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------
Q 048594          313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------  382 (483)
Q Consensus       313 i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------  382 (483)
                      ....++++++.+++++|+.+|.|++|+|+.+||..+|+.+|..+++++++++|+.+|.|++|.+...+++          
T Consensus       292 s~E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~  371 (440)
T 3u0k_A          292 TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDT  371 (440)
T ss_dssp             BCBCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC----
T ss_pred             hHhhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC
Confidence            3457899999999999999999999999999999999999999999999999999999999984443332          


Q ss_pred             hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       383 ~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+++++++|+.||+|+        +|+|+.+||+++|..+|.. ++++++++|.++|.|+||.|+|+||+++|..
T Consensus       372 d~eeeLreAFk~fDkDg--------dG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMtS  439 (440)
T 3u0k_A          372 DSEEEIREAFRVFDKDG--------NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA  439 (440)
T ss_dssp             --CHHHHHHHHHHCTTC--------SSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred             ChHHHHHHHHHHHCCCC--------cCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence            24577999999999999        9999999999999999988 9999999999999999999999999999854

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.85  E-value=4.4e-21  Score=165.46  Aligned_cols=130  Identities=28%  Similarity=0.458  Sum_probs=118.1

Q ss_pred             hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------hchhHH
Q 048594          319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------QCKDTS  388 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~~~~~~  388 (483)
                      ++++..++++|..+|.|++|+|+.+||..+++.+|.+++..++..++..+|.+++|.+....++          ...+.+
T Consensus         2 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l   81 (143)
T 2obh_A            2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEI   81 (143)
T ss_dssp             HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHH
Confidence            5677899999999999999999999999999999999999999999999999999984433322          124678


Q ss_pred             HHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          389 LKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       389 ~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+|+.||+++        +|+|+.+||+++++.+|.. +++++.+++..+|.|+||.|+|+||+.+|.
T Consensus        82 ~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~  142 (143)
T 2obh_A           82 LKAFKLFDDDE--------TGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK  142 (143)
T ss_dssp             HHHHHHHCTTC--------SSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred             HHHHHHhCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            89999999999        9999999999999999988 999999999999999999999999999885

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.85  E-value=1.8e-22  Score=211.92  Aligned_cols=152  Identities=21%  Similarity=0.229  Sum_probs=117.8

Q ss_pred             EEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC--------------------------------------CCcCeE
Q 048594           52 TIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK--------------------------------------SDEGYL   93 (483)
Q Consensus        52 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------------------------------~~~~~l   93 (483)
                      ...+.||+|+||+||+|.  ..+..+|+|.......                                      ....|+
T Consensus       339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            457789999999999994  4578899998644221                                      111299


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      |||||+|++|.+++..        +..++.||+.||.|||+++|+||||||+|||+   +.  .+||+|||+++......
T Consensus       417 VmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl---~~--~~kL~DFGla~~~~~~~  483 (540)
T 3en9_A          417 MMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF---DK--DLYIIDFGLGKISNLDE  483 (540)
T ss_dssp             EEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEE---SS--SEEECCCTTCEECCCHH
T ss_pred             EEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEE---CC--eEEEEECccCEECCCcc
Confidence            9999999999999876        56899999999999999999999999999999   44  89999999999875432


Q ss_pred             e--------ecccccCCcccCccccCC--CCCCCcCchHHHHHHHHHHhhCCCCC
Q 048594          174 V--------YEEVVGTPLYMAPELLGP--CKYGKEIDIWSAGLILYNLLSGAQPF  218 (483)
Q Consensus       174 ~--------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~~ll~g~~pf  218 (483)
                      .        ....+||+.|+|||++..  ..|+..+|+|+..+-..+-..++.+|
T Consensus       484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            2        135689999999999976  46778899999988888887777766

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.84  E-value=2.7e-20  Score=161.30  Aligned_cols=135  Identities=30%  Similarity=0.513  Sum_probs=121.8

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------hc
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------QC  384 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~~  384 (483)
                      ..++.+++..++++|..+|.|++|.|+.+||..+++.+|..++..++..++..+|.+++|.+....++          ..
T Consensus         2 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   81 (148)
T 1exr_A            2 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDS   81 (148)
T ss_dssp             CCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCc
Confidence            35678888999999999999999999999999999999999999999999999999999984333322          23


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+.+..+|+.||+++        +|+|+.+||++++..+|.. +++++..++..+|.|+||.|+|+||+.+|..
T Consensus        82 ~~~l~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~  147 (148)
T 1exr_A           82 EEELIEAFKVFDRDG--------NGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS  147 (148)
T ss_dssp             HHHHHHHHHHHSTTC--------SSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCC--------CCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence            466889999999999        9999999999999999988 9999999999999999999999999999864

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.84  E-value=3.9e-20  Score=166.01  Aligned_cols=159  Identities=21%  Similarity=0.387  Sum_probs=137.7

Q ss_pred             CHHHHHHHHHHhhhhHHHHHHHHHhhhccc--hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHH
Q 048594          289 DTAIISRVKQFRAMSKLKKLALKVIVENLP--AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQ  366 (483)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~~~~l~~i~~~~~--~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~  366 (483)
                      ...++.++++|...+++++.++..++..++  .+++..++++|..+|.|++|+|+.+||..+++.+|.+  ..++..+|.
T Consensus         3 ~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~~~   80 (180)
T 3mse_B            3 SPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQ   80 (180)
T ss_dssp             CHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC--HHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC--HHHHHHHHH
Confidence            356788999999999999999999998887  8889999999999999999999999999999999864  688999999


Q ss_pred             hccCCCCCceeechhhh--------chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHH
Q 048594          367 AADIDGNGTTLNLSLVQ--------CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEV  438 (483)
Q Consensus       367 ~~d~~~~g~~~~~~~~~--------~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~  438 (483)
                      .+|.+++|.+....+..        ..+.+..+|+.||+++        +|+|+.+||+.+++..+. +++++++++..+
T Consensus        81 ~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~~~D~d~--------~G~I~~~El~~~l~~~~~-~~~~~~~~~~~~  151 (180)
T 3mse_B           81 ALDINDRGNITYTEFMAGCYRWKNIESTFLKAAFNKIDKDE--------DGYISKSDIVSLVHDKVL-DNNDIDNFFLSV  151 (180)
T ss_dssp             HHCTTCCSEECHHHHHHHHSCCTTC--CHHHHHHHHHCTTC--------SSCBCHHHHHHHTTTSSC-CHHHHHHHHHHH
T ss_pred             HhCCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHHHHCCCC--------CCCCCHHHHHHHHcCCCC-CHHHHHHHHHHh
Confidence            99999999843333221        2367999999999999        999999999999994333 899999999999


Q ss_pred             cCCCC--------CcccHHHHHHHHHcC
Q 048594          439 DRDKD--------GRISYEEFCATMKTG  458 (483)
Q Consensus       439 d~~~~--------g~i~~~ef~~~~~~~  458 (483)
                      |.|+|        |.|+|+||+.+|...
T Consensus       152 d~~~d~~~~~~~~G~i~~~eF~~~l~~~  179 (180)
T 3mse_B          152 HSIKKGIPREHIINKISFQEFKDYMLST  179 (180)
T ss_dssp             HTC---------CCCBCHHHHHHHHHTT
T ss_pred             hhccCcccccccCCeeeHHHHHHHHHhc
Confidence            99988        999999999999753

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.83  E-value=9.7e-21  Score=171.15  Aligned_cols=162  Identities=30%  Similarity=0.449  Sum_probs=144.5

Q ss_pred             CCCHHHHHHHHHHhhhhHHHHHHHHHhhhcc-chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhc-----------CC
Q 048594          287 PIDTAIISRVKQFRAMSKLKKLALKVIVENL-PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL-----------GS  354 (483)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~~~~l~~i~~~~-~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~-----------~~  354 (483)
                      |+....++++++|...+++++.++..++..+ +.+++..++++|..+|.|++|.|+.+||..++..+           +.
T Consensus         3 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~   82 (191)
T 3khe_A            3 HALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDS   82 (191)
T ss_dssp             CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccc
Confidence            4456788999999999999999999999888 88999999999999999999999999999999988           77


Q ss_pred             CCCHHHHHHHHHhccCCCCCceeechhh---------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCC
Q 048594          355 TLTEVDVKQYMQAADIDGNGTTLNLSLV---------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM  425 (483)
Q Consensus       355 ~~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~  425 (483)
                      .++..++..+|..+|.+++|.+....+.         ...+.+..+|+.+|.++        +|+|+.+|+.+++.  |.
T Consensus        83 ~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~--------~G~I~~~E~~~~l~--~~  152 (191)
T 3khe_A           83 SQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDG--------SGKITNEELGRLFG--VT  152 (191)
T ss_dssp             HHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTC--------SSEECHHHHHHHTT--SS
T ss_pred             hhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCC--------cCcCCHHHHHHHHc--cC
Confidence            7788999999999999999984333322         23578899999999999        99999999999999  66


Q ss_pred             C-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          426 G-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       426 ~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      . ++++++.++..+|.|+||.|+|+||+.+|..-
T Consensus       153 ~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~  186 (191)
T 3khe_A          153 EVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI  186 (191)
T ss_dssp             CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            6 89999999999999999999999999998754

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.83  E-value=2.4e-20  Score=164.55  Aligned_cols=153  Identities=45%  Similarity=0.746  Sum_probs=126.6

Q ss_pred             HHhhhhHHHHHHHHHhhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCcee
Q 048594          298 QFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTL  377 (483)
Q Consensus       298 ~~~~~~kl~~~~l~~i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~  377 (483)
                      +|...+.+++.++..++..++.+++..++++|..+|.|++|.|+.+||..++..+|..++..++..++..+|.+++|.+.
T Consensus         2 ~f~~~~~~~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~   81 (166)
T 2aao_A            2 QFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTID   81 (166)
T ss_dssp             ----CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBC
T ss_pred             chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEc
Confidence            56677888898999999999999999999999999999999999999999999999999999999999999999999843


Q ss_pred             echhh---------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccH
Q 048594          378 NLSLV---------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISY  448 (483)
Q Consensus       378 ~~~~~---------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~  448 (483)
                      ...+.         ...+.+..+|+.+|.++        +|+|+.+||+.++..+|. ++++++.++..+|.|++|.|+|
T Consensus        82 ~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~--------~G~i~~~e~~~~l~~~~~-~~~~~~~~~~~~d~~~dg~i~~  152 (166)
T 2aao_A           82 YKEFIAATLHLNKIEREDHLFAAFTYFDKDG--------SGYITPDELQQACEEFGV-EDVRIEELMRDVDQDNDGRIDY  152 (166)
T ss_dssp             HHHHHHHHTTCHHHHTTHHHHHHHHHHCTTC--------SSSBCHHHHHHHTCC---------CCHHHHHCTTCSSSBCH
T ss_pred             HHHHHHHHHHHhhcccHHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHcCC-CHHHHHHHHHHhCCCCCCcEeH
Confidence            33222         23567899999999999        999999999999999886 5788999999999999999999


Q ss_pred             HHHHHHHHcCC
Q 048594          449 EEFCATMKTGT  459 (483)
Q Consensus       449 ~ef~~~~~~~~  459 (483)
                      +||+.+|....
T Consensus       153 ~eF~~~~~~~~  163 (166)
T 2aao_A          153 NEFVAMMQKGS  163 (166)
T ss_dssp             HHHHHHHC---
T ss_pred             HHHHHHHHhcc
Confidence            99999997653

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.82  E-value=6.7e-21  Score=183.66  Aligned_cols=131  Identities=18%  Similarity=0.146  Sum_probs=103.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC-----------------------------------------
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK-----------------------------------------   87 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----------------------------------------   87 (483)
                      ..|.+.+.||+|+||.||+|.+ .+|+.||+|++.....                                         
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~  168 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPK  168 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCC
T ss_pred             eEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCe
Confidence            3456669999999999999999 8899999999964221                                         


Q ss_pred             ---CCcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           88 ---SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        88 ---~~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                         ....|+|||||+|++|.+ +..      ..+..++.||+.||.|||++||+||||||+|||+   + ++.+||+|||
T Consensus       169 ~~~~~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl---~-~~~vkl~DFG  237 (282)
T 1zar_A          169 VYAWEGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV---S-EEGIWIIDFP  237 (282)
T ss_dssp             EEEEETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---E-TTEEEECCCT
T ss_pred             EEeccceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEE---E-CCcEEEEECC
Confidence               011299999999999988 421      2355799999999999999999999999999999   4 6789999999


Q ss_pred             cceeccCCceecccccCCcccCccccCC----------CCCCCcCchHH
Q 048594          165 LAFFFEEGKVYEEVVGTPLYMAPELLGP----------CKYGKEIDIWS  203 (483)
Q Consensus       165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~Diws  203 (483)
                      ++..            +..+.|||.+..          ..|+..+|+|+
T Consensus       238 ~a~~------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~  274 (282)
T 1zar_A          238 QSVE------------VGEEGWREILERDVRNIITYFSRTYRTEKDINS  274 (282)
T ss_dssp             TCEE------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred             CCeE------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence            9874            334678887743          24455566665

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.81  E-value=3e-19  Score=157.97  Aligned_cols=136  Identities=29%  Similarity=0.452  Sum_probs=122.1

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhh----------c
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ----------C  384 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~----------~  384 (483)
                      ..++.+++..++++|..+|.|++|.|+.+||..+++.+|..++..++..++..+|.+++|.+....+..          .
T Consensus        20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   99 (169)
T 3qrx_A           20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDS   99 (169)
T ss_dssp             CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCc
Confidence            357888999999999999999999999999999999999999999999999999999999844333221          2


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      .+.+..+|+.+|+++        +|+|+.+||..++..+|.. +++++..++..+|.|+||.|+|+||+.+|+..
T Consensus       100 ~~~~~~~F~~~D~d~--------~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~  166 (169)
T 3qrx_A          100 REEILKAFRLFDDDN--------SGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKT  166 (169)
T ss_dssp             HHHHHHHHHHHCTTC--------SSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC--
T ss_pred             HHHHHHHHHHhCCCC--------CCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHhc
Confidence            567889999999999        9999999999999999988 99999999999999999999999999999654

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.81  E-value=1.4e-19  Score=158.19  Aligned_cols=136  Identities=23%  Similarity=0.401  Sum_probs=122.9

Q ss_pred             hccchHHHhhHHHHHhhcC-CCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh-----------
Q 048594          315 ENLPAEEIQKHKETFKQMD-TNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV-----------  382 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D-~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~-----------  382 (483)
                      ..++++++..++++|..+| .|++|+|+.+||..+++.+|..++..++..++..+|.+++|.+....+.           
T Consensus         5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~   84 (158)
T 2jnf_A            5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEV   84 (158)
T ss_dssp             TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCC
T ss_pred             hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccc
Confidence            4577889999999999999 9999999999999999999999999999999999999999983332211           


Q ss_pred             ---hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          383 ---QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       383 ---~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                         .....+..+|+.||+++        +|+|+.+||+.+++.+|.. +++++..++..+|.|+||.|+|+||+.+|...
T Consensus        85 ~~~~~~~~~~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  156 (158)
T 2jnf_A           85 NPEQMQQELREAFRLYDKEG--------NGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGG  156 (158)
T ss_dssp             CTTTTSSTHHHHHHHHCSSS--------SSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSSC
T ss_pred             chhhHHHHHHHHHHHhCCCC--------CCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcc
Confidence               34567999999999999        9999999999999999988 99999999999999999999999999998764

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.81  E-value=1e-19  Score=157.75  Aligned_cols=135  Identities=24%  Similarity=0.386  Sum_probs=121.6

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhh----------
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ----------  383 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~----------  383 (483)
                      +..++.+++..++++|..+|.|++|.|+.+||..+++.+|..++..++..++..+|.+++|.+....+..          
T Consensus         2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   81 (153)
T 3ox6_A            2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAET   81 (153)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCC
T ss_pred             cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccc
Confidence            4567889999999999999999999999999999999999999999999999999999999833322221          


Q ss_pred             ----chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhh-CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          384 ----CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE-YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       384 ----~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~-~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                          ..+.+..+|+.+|+++        +|+|+.+||+.+++. +|.. ++++++.++..+|.|++|.|+|+||+.+|.
T Consensus        82 ~~~~~~~~~~~~F~~~D~d~--------~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  152 (153)
T 3ox6_A           82 ADMIGVKELRDAFREFDTNG--------DGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS  152 (153)
T ss_dssp             HHHHCHHHHHHHHHHHCTTC--------SSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred             cccccHHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence                1466899999999999        999999999999999 8888 999999999999999999999999999875

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.81  E-value=2.6e-19  Score=154.26  Aligned_cols=134  Identities=28%  Similarity=0.478  Sum_probs=120.6

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------h
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------Q  383 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~  383 (483)
                      +..++.+++..++++|..+|.|++|.|+.+||..+++.+|..++..++..++..+|.+++|.+....+.          .
T Consensus         2 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   81 (147)
T 4ds7_A            2 SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCND   81 (147)
T ss_dssp             --CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHH
T ss_pred             CCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCC
Confidence            456888999999999999999999999999999999999999999999999999999999984333322          2


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+.+..+|+.+|+++        +|+|+.+||.++++.+|.. +++++..++..+| |++|.|+|+||+.+|+
T Consensus        82 ~~~~~~~~F~~~D~d~--------~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~  146 (147)
T 4ds7_A           82 SEQELLEAFKVFDKNG--------DGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS  146 (147)
T ss_dssp             HHHHHHHHHHHHCTTC--------SSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred             cHHHHHHHHHHhCCCC--------CCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence            3467889999999999        9999999999999999988 9999999999999 9999999999999875

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.81  E-value=2.3e-19  Score=157.18  Aligned_cols=136  Identities=25%  Similarity=0.351  Sum_probs=123.4

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------h
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------Q  383 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~  383 (483)
                      ...++.+++..++++|..+|.|++|.|+.+||..+++.+|..++..++..++..+|.+++|.+....++          .
T Consensus        14 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   93 (161)
T 3fwb_A           14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRD   93 (161)
T ss_dssp             TTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCC
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCC
Confidence            456788999999999999999999999999999999999999999999999999999999984333322          1


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+.+..+|+.||+++        +|+|+.+||+.+++.+|.. ++++++.++..+|.|++|.|+|+||+.+|..
T Consensus        94 ~~~~~~~~F~~~D~d~--------~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  160 (161)
T 3fwb_A           94 PLDEIKRAFQLFDDDH--------TGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD  160 (161)
T ss_dssp             HHHHHHHHHHHHCTTC--------SSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCC--------CCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            2567899999999999        9999999999999999988 9999999999999999999999999999864

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.80  E-value=2.5e-19  Score=166.17  Aligned_cols=154  Identities=14%  Similarity=0.131  Sum_probs=134.1

Q ss_pred             HHHHhhhhHHHHHHHHHhhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          296 VKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       296 ~~~~~~~~kl~~~~l~~i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ...+.....+++..+..++..++.+++..++++|+.+|.|++|.|+.+||..+++.+|..++.++++.+++.+|.+++|.
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~  103 (220)
T 3sjs_A           24 ACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGH  103 (220)
T ss_dssp             HHHHHSCHHHHTSTTGGGGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSC
T ss_pred             hhccCCChhHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCc
Confidence            44555566666666667788899999999999999999999999999999999999999999999999999999999998


Q ss_pred             eeechhhh---chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHH
Q 048594          376 TLNLSLVQ---CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEF  451 (483)
Q Consensus       376 ~~~~~~~~---~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef  451 (483)
                      +....+..   ..+.+..+|+.||+|+        +|+|+.+||+++++.+|.. ++++++.++..+| |+||.|+|+||
T Consensus       104 I~~~EF~~~~~~~~~l~~~F~~~D~d~--------~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF  174 (220)
T 3sjs_A          104 ISFYEFMAMYKFMELAYNLFVMNARAR--------SGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCW  174 (220)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHHCCSS--------TTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCCC--------CCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHH
Confidence            54444332   3467899999999999        9999999999999999988 9999999999999 99999999999


Q ss_pred             HHHHHcC
Q 048594          452 CATMKTG  458 (483)
Q Consensus       452 ~~~~~~~  458 (483)
                      +.+|..-
T Consensus       175 ~~~~~~l  181 (220)
T 3sjs_A          175 IAICAFA  181 (220)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9988553

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.80  E-value=2.6e-19  Score=153.57  Aligned_cols=129  Identities=21%  Similarity=0.377  Sum_probs=116.9

Q ss_pred             hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------hchhHH
Q 048594          319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------QCKDTS  388 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~~~~~~  388 (483)
                      ++++..++++|..+|.|++|.|+.+||..+++.+|..++..++..++..+|.+++|.+....+.          ...+.+
T Consensus         2 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~   81 (142)
T 2bl0_C            2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDIL   81 (142)
T ss_dssp             CHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHH
Confidence            5678899999999999999999999999999999999999999999999999999984333222          235678


Q ss_pred             HHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          389 LKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       389 ~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+|+.+|+++        +|+|+.+||+.+++.+|.. +++++..++..+| |++|.|+|+||+.+|.
T Consensus        82 ~~~F~~~D~d~--------~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~  141 (142)
T 2bl0_C           82 RQAFRTFDPEG--------TGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF  141 (142)
T ss_dssp             HHHHHHTCCSS--------CSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred             HHHHHHHCCCC--------CCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence            99999999999        9999999999999999988 9999999999999 9999999999998774

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.79  E-value=4.4e-19  Score=158.54  Aligned_cols=138  Identities=30%  Similarity=0.507  Sum_probs=118.8

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------h
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------Q  383 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~  383 (483)
                      +..++.+++..++++|..+|.|++|.|+.+||..+++.+|..++..++..+|..+|.+++|.+....+.          .
T Consensus         2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~   81 (179)
T 2f2o_A            2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD   81 (179)
T ss_dssp             ----CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcc
Confidence            345778889999999999999999999999999999999999999999999999999999984333322          2


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      ..+.+..+|+.||+++        +|+|+.+||+.++..+|.. +++++..++..+|.|+||.|+|+||+.+|....
T Consensus        82 ~~~~~~~~F~~~D~d~--------~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~  150 (179)
T 2f2o_A           82 SEEEIREAFRVFDKDG--------NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKG  150 (179)
T ss_dssp             HHHHHHHHHHHHCTTC--------SSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC--
T ss_pred             cHHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcC
Confidence            3456889999999999        9999999999999999988 999999999999999999999999999997654

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.79  E-value=8.8e-19  Score=153.61  Aligned_cols=137  Identities=24%  Similarity=0.419  Sum_probs=123.4

Q ss_pred             hhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhh---------
Q 048594          313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ---------  383 (483)
Q Consensus       313 i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---------  383 (483)
                      ++..++.+++..++++|..+|.|++|.|+.+||..++..+|..++..++..++..+|.+++|.+....+..         
T Consensus        10 ~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~   89 (162)
T 1top_A           10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED   89 (162)
T ss_dssp             HHHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccc
Confidence            44568899999999999999999999999999999999999999999999999999999999843322211         


Q ss_pred             ----chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 ----CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ----~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                          ..+.+..+|+.+|.++        +|+|+.+||+.++..+|.. +++++..++..+|.|+||.|+|+||+.+|..
T Consensus        90 ~~~~~~~~~~~~F~~~D~d~--------~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  160 (162)
T 1top_A           90 AKGKSEEELANCFRIFDKNA--------DGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG  160 (162)
T ss_dssp             HHHHHHHHHHHHHHHHCTTC--------SSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred             cccccHHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence                3556889999999999        9999999999999999987 8999999999999999999999999999864

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.79  E-value=6.2e-19  Score=154.52  Aligned_cols=137  Identities=26%  Similarity=0.427  Sum_probs=121.4

Q ss_pred             hhhccchHHHhhHHHHHhhcCCCC-CCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh---------
Q 048594          313 IVENLPAEEIQKHKETFKQMDTND-SGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV---------  382 (483)
Q Consensus       313 i~~~~~~~~~~~l~~~F~~~D~d~-~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~---------  382 (483)
                      ++..++.+++..++++|..+|.|+ +|.|+.+||..+++.+|..++..++..+|..+|.+++|.+....+.         
T Consensus         8 ~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~   87 (161)
T 1dtl_A            8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD   87 (161)
T ss_dssp             GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred             HHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcc
Confidence            456688899999999999999999 9999999999999999999999999999999999999983332221         


Q ss_pred             ----hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          383 ----QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       383 ----~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                          ...+.+..+|+.+|+++        +|+|+.+||+.++..+|.. +++++..++..+|.|+||.|+|+||+.+|..
T Consensus        88 ~~~~~~~~~~~~~F~~~D~d~--------~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  159 (161)
T 1dtl_A           88 DSKGKSEEELSDLFRMFDKNA--------DGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG  159 (161)
T ss_dssp             ----CHHHHHHHHHHHHCTTC--------SSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred             cccchHHHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence                23556899999999999        9999999999999999987 9999999999999999999999999999864

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.78  E-value=2e-18  Score=148.92  Aligned_cols=131  Identities=15%  Similarity=0.292  Sum_probs=117.7

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhc---cCCCCCceeechhh-----------
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAA---DIDGNGTTLNLSLV-----------  382 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~---d~~~~g~~~~~~~~-----------  382 (483)
                      ++++++..++++|..+|.|++|.|+.+||..+++.+|..++..++..++..+   |.++ |.+....+.           
T Consensus         2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~   80 (149)
T 2mys_C            2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKD   80 (149)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCC
Confidence            5678889999999999999999999999999999999999999999999999   9999 873222211           


Q ss_pred             -hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          383 -QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       383 -~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                       .....+..+|+.||+++        +|+|+.+||+.++..+|.. +++++..++.. |.|++|.|+|+||+.+|..
T Consensus        81 ~~~~~~~~~~F~~~D~d~--------~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~  148 (149)
T 2mys_C           81 QGTFEDFVEGLRVFDKEG--------NGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS  148 (149)
T ss_pred             cchHHHHHHHHHHhCCCC--------CceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence             23467889999999999        9999999999999999988 99999999999 9999999999999999865

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.78  E-value=1.9e-19  Score=162.73  Aligned_cols=136  Identities=43%  Similarity=0.698  Sum_probs=120.9

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh---------hch
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV---------QCK  385 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~  385 (483)
                      ..++++++..++++|..+|.|++|.|+.+||..+++.+|..+++.++..+|..+|.+++|.+....+.         ...
T Consensus         2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~   81 (188)
T 1s6i_A            2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE   81 (188)
T ss_dssp             CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHH
Confidence            35677888999999999999999999999999999999999999999999999999999984333322         224


Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      +.+..+|+.||+++        +|+|+.+||+.++..+|. ++++++.+|..+|.|+||.|+|+||+.+|....
T Consensus        82 ~~l~~~F~~~D~d~--------dG~Is~~El~~~l~~~g~-~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~  146 (188)
T 1s6i_A           82 ENLVSAFSYFDKDG--------SGYITLDEIQQACKDFGL-DDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRK  146 (188)
T ss_dssp             CSTHHHHHHTTTTC--------SSEEEHHHHHHTTTTTTC-CTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCC
T ss_pred             HHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHcC
Confidence            67899999999999        999999999999999986 678899999999999999999999999996544

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=99.78  E-value=2e-18  Score=152.28  Aligned_cols=134  Identities=18%  Similarity=0.336  Sum_probs=118.0

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCC-CCCHHHHHHHHHhccCCCCCceeechhh----------h
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS-TLTEVDVKQYMQAADIDGNGTTLNLSLV----------Q  383 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~-~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~  383 (483)
                      ..++.+++..++++|..+|.|++|.|+.+||..+++.+|. .++..++..++...    +|.+....++          .
T Consensus        17 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~   92 (166)
T 2mys_B           17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGAD   92 (166)
T ss_pred             hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCC
Confidence            3578889999999999999999999999999999999999 99999999999875    4552222221          2


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCC
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTH  460 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~  460 (483)
                      ..+.+..+|+.||+|+        +|+|+.+||..++..+|.. ++++++.++..+|.|+||.|+|+||+.+|.....
T Consensus        93 ~~~~l~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~~~  162 (166)
T 2mys_B           93 PEDVIMGAFKVLDPDG--------KGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHGED  162 (166)
T ss_pred             cHHHHHHHHHHhCCCC--------CcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhccc
Confidence            3567899999999999        9999999999999999988 9999999999999999999999999999987644

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.78  E-value=6.1e-19  Score=153.88  Aligned_cols=136  Identities=19%  Similarity=0.287  Sum_probs=121.8

Q ss_pred             ccchHHHhhHHHHHhhcCC--CCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh-----------h
Q 048594          316 NLPAEEIQKHKETFKQMDT--NDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL-----------V  382 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~--d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~-----------~  382 (483)
                      .++++++..++++|..+|.  |++|.|+.+||..+++.+|..++..++..+ ..+|.+++|.+....+           .
T Consensus         2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~   80 (156)
T 1wdc_C            2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQ   80 (156)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred             CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccC
Confidence            3678889999999999999  999999999999999999999999999999 9999999998333222           2


Q ss_pred             hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHH--HcCCCCCcccHHHHHHHHHcCC
Q 048594          383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFE--VDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       383 ~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~--~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      ...+.+..+|+.||+++        +|+|+.+||+.+++.+|.. +++++..++..  +|.|++|.|+|+||+.+|....
T Consensus        81 ~~~~~l~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~  152 (156)
T 1wdc_C           81 GTFADYMEAFKTFDREG--------QGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP  152 (156)
T ss_dssp             CCHHHHHHHHHTTCSSS--------SSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHCS
T ss_pred             ChHHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcCC
Confidence            23477899999999999        9999999999999999988 99999999999  9999999999999999998764


Q ss_pred             C
Q 048594          460 H  460 (483)
Q Consensus       460 ~  460 (483)
                      +
T Consensus       153 ~  153 (156)
T 1wdc_C          153 Y  153 (156)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=99.78  E-value=5.4e-19  Score=151.76  Aligned_cols=130  Identities=24%  Similarity=0.384  Sum_probs=115.4

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------hchh
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------QCKD  386 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~~~~  386 (483)
                      ++.+++..++++|..+|+|++|+|+.+||..+++.+|..++..++..++..    ++|.+....++          ...+
T Consensus         1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~   76 (143)
T 3j04_B            1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPED   76 (143)
T ss_dssp             CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHH
Confidence            467888999999999999999999999999999999999999999988877    66663222211          2356


Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      .+..+|+.||+++        +|+|+.+||+.++..+|.. ++++++.++..+|.|+||.|+|+||+.+|+.+
T Consensus        77 ~l~~~F~~~D~d~--------~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  141 (143)
T 3j04_B           77 VIRNAFACFDEEA--------SGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHG  141 (143)
T ss_dssp             HHHHHHTTSCSSS--------CCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHSS
T ss_pred             HHHHHHHHHCCCC--------CCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhcc
Confidence            7999999999999        9999999999999999988 99999999999999999999999999999875

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.78  E-value=2e-19  Score=155.45  Aligned_cols=129  Identities=19%  Similarity=0.323  Sum_probs=112.5

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhc-cCCCCCceeechh---------------hhc
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAA-DIDGNGTTLNLSL---------------VQC  384 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~-d~~~~g~~~~~~~---------------~~~  384 (483)
                      ++..++++|..+|.|++|.|+.+||..+++.+|..++..++..++..+ |.+++|.+....+               ...
T Consensus         2 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~   81 (148)
T 1m45_A            2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAK   81 (148)
T ss_dssp             -CCCCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCC
T ss_pred             hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhcccccccc
Confidence            345678899999999999999999999999999999999999999999 9999998333221               123


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+.+..+|+.||+++        +|+|+.+||+.++..+|.. +++++..++..+|.|++|.|+|+||+.+|..
T Consensus        82 ~~~~~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~  147 (148)
T 1m45_A           82 TEDFVKAFQVFDKES--------TGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR  147 (148)
T ss_dssp             THHHHHHHHTTCSSS--------SSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCC--------CCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            477899999999999        9999999999999999988 9999999999999999999999999999864

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.77  E-value=1.9e-19  Score=156.10  Aligned_cols=133  Identities=17%  Similarity=0.335  Sum_probs=111.3

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCC--CCCceeechhhh----------
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADID--GNGTTLNLSLVQ----------  383 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~--~~g~~~~~~~~~----------  383 (483)
                      .++++++..++++|..+|.|++|+|+.+||..+++.+|..++..++..++..+|.+  ++|.+....+..          
T Consensus         3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~   82 (151)
T 1w7j_B            3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRG   82 (151)
T ss_dssp             --------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC---
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCC
Confidence            35678888999999999999999999999999999999999999999999999999  899743332221          


Q ss_pred             --chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 --CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 --~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                        ..+.+..+|+.||+++        +|+|+.+||+.+++.+|.. +++++..++..+| |++|.|+|+||+.+|..
T Consensus        83 ~~~~~~l~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~~  150 (151)
T 1w7j_B           83 QGTYEDYLEGFRVFDKEG--------NGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHILS  150 (151)
T ss_dssp             -----CCHHHHHTTCTTS--------SSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred             CCcHHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHhc
Confidence              2456788999999999        9999999999999999988 9999999999999 99999999999999864

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.76  E-value=2.5e-18  Score=155.77  Aligned_cols=141  Identities=21%  Similarity=0.223  Sum_probs=116.5

Q ss_pred             HHHhhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHH-----HHHHhcCCCCCHH-----HHHHHHHhccCCCCCceeec
Q 048594          310 LKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFK-----AGLSKLGSTLTEV-----DVKQYMQAADIDGNGTTLNL  379 (483)
Q Consensus       310 l~~i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~-----~~l~~~~~~~~~~-----~~~~l~~~~d~~~~g~~~~~  379 (483)
                      +..+...++++++..++++|..+|.|++|+|+.+||.     .+++.+|..++..     ++..++..+|.+++|.+...
T Consensus         7 ~~~~~~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~   86 (195)
T 1qv0_A            7 VKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFP   86 (195)
T ss_dssp             CCCSCCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHH
T ss_pred             hhcCcccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHH
Confidence            3334445588999999999999999999999999999     7889999988877     68999999999999984333


Q ss_pred             hhhhc----------------hhHHH----HHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHH
Q 048594          380 SLVQC----------------KDTSL----KDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEV  438 (483)
Q Consensus       380 ~~~~~----------------~~~~~----~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~  438 (483)
                      .++..                .+.++    .+|+.||+|+        +|+|+.+||+.+++.+|.. +++++..++..+
T Consensus        87 EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~--------~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~  158 (195)
T 1qv0_A           87 QFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDG--------SGTITLDEWKAYGKISGISPSQEDCEATFRHC  158 (195)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC------------CEECHHHHHHHHHHHSSCCCHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence            32210                12243    8999999999        9999999999999999988 899999999999


Q ss_pred             cCCCCCcccHHHHHHHHHcC
Q 048594          439 DRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       439 d~~~~g~i~~~ef~~~~~~~  458 (483)
                      |.|+||.|+|+||+.++...
T Consensus       159 D~d~dg~i~~~eF~~~~~~~  178 (195)
T 1qv0_A          159 DLDNAGDLDVDEMTRQHLGF  178 (195)
T ss_dssp             CCCTTSCEEHHHHHHHHHHH
T ss_pred             CCCCCCcCCHHHHHHHHHHH
Confidence            99999999999999998764

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=99.75  E-value=6.8e-18  Score=147.28  Aligned_cols=134  Identities=17%  Similarity=0.350  Sum_probs=115.8

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------h
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------Q  383 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~  383 (483)
                      ...++.+++..++++|..+|.|++|.|+.+||..+++.+|..++..++..++..    ++|.+....++          .
T Consensus         9 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~   84 (156)
T 1wdc_B            9 LTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSIFSDKLSGTD   84 (156)
T ss_dssp             ---CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHTT----SSSCCCHHHHHHHHHHHTCSCC
T ss_pred             hccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCcCcHHHHHHHHHHHhcCCC
Confidence            456788899999999999999999999999999999999999999999999963    56663222221          2


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCC
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTH  460 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~  460 (483)
                      ..+.+..+|+.||+++        +|+|+.+||+.++..+|.. ++++++.++..+|.| ||.|+|+||+.+|..+..
T Consensus        85 ~~~~l~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~~~  153 (156)
T 1wdc_B           85 SEETIRNAFAMFDEQE--------TKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGSGE  153 (156)
T ss_dssp             CHHHHHHHHHTTCTTC--------CSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTSCC
T ss_pred             hHHHHHHHHHHHCcCC--------CCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcCcc
Confidence            3567899999999999        9999999999999999988 999999999999999 999999999999987653

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.74  E-value=1.2e-17  Score=148.51  Aligned_cols=133  Identities=18%  Similarity=0.257  Sum_probs=116.1

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHH----HHHhcCCCCCHHHHH-----------HHHHhccCCCCCceeechhh
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKA----GLSKLGSTLTEVDVK-----------QYMQAADIDGNGTTLNLSLV  382 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~----~l~~~~~~~~~~~~~-----------~l~~~~d~~~~g~~~~~~~~  382 (483)
                      +++++..++++|..+|.|++|.|+.+||..    +++.+|.+++..++.           .+|..+|.+++|.+....+.
T Consensus         2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~   81 (176)
T 1nya_A            2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFI   81 (176)
T ss_dssp             CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHH
T ss_pred             cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence            567788999999999999999999999999    788899999988887           88999999999983332221


Q ss_pred             h-----------------chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCc
Q 048594          383 Q-----------------CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGR  445 (483)
Q Consensus       383 ~-----------------~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~  445 (483)
                      .                 ....+..+|+.+|.++        +|+|+.+|+..++..+| .+++++..++..+|.|+||.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~--------~G~I~~~e~~~~l~~~g-~~~~~~~~~~~~~D~d~dg~  152 (176)
T 1nya_A           82 RVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNA--------DGQINADEFAAWLTALG-MSKAEAAEAFNQVDTNGNGE  152 (176)
T ss_dssp             HHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSC--------CSEEEHHHHHHHHHHTT-CCHHHHHHHHHHHCTTCSSE
T ss_pred             HHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCC--------CCCCCHHHHHHHHHHhC-CCHHHHHHHHHHhCCCCCCC
Confidence            1                 1245889999999999        99999999999999999 58899999999999999999


Q ss_pred             ccHHHHHHHHHcCC
Q 048594          446 ISYEEFCATMKTGT  459 (483)
Q Consensus       446 i~~~ef~~~~~~~~  459 (483)
                      |+|+||+.+|....
T Consensus       153 i~~~ef~~~~~~~~  166 (176)
T 1nya_A          153 LSLDELLTAVRDFH  166 (176)
T ss_dssp             EEHHHHHHHHSCCS
T ss_pred             CcHHHHHHHHHHHh
Confidence            99999999997654

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=99.74  E-value=5.4e-18  Score=154.23  Aligned_cols=134  Identities=17%  Similarity=0.322  Sum_probs=118.4

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------h
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------Q  383 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~  383 (483)
                      ...++.+++..++++|..+|.|++|+|+.+||..+|+.+|..++..++..++..+    +|.+....++          .
T Consensus        48 ~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~  123 (196)
T 3dtp_E           48 FAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTD  123 (196)
T ss_dssp             SCSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSC
T ss_pred             hhhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCC
Confidence            3457888899999999999999999999999999999999999999999999988    5653222221          2


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCC
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTH  460 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~  460 (483)
                      ..+.+..+|+.||.++        +|+|+.+||+.+| .+|.. +++++..+|..+|.|+||.|+|+||+.+|..+..
T Consensus       124 ~~~~l~~~F~~~D~d~--------~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~  192 (196)
T 3dtp_E          124 EEDVIVNAFNLFDEGD--------GKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKGAK  192 (196)
T ss_dssp             CHHHHHHHHHTTCSSS--------SCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSSCCB
T ss_pred             cHHHHHHHHHHHCCCC--------CCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcCCc
Confidence            3577899999999999        9999999999999 99988 9999999999999999999999999999987654

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.74  E-value=8.8e-18  Score=151.48  Aligned_cols=135  Identities=21%  Similarity=0.218  Sum_probs=117.7

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHH-----HHHHhcCCCCCHH-----HHHHHHHhccCCCCCceeechhhhc-
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFK-----AGLSKLGSTLTEV-----DVKQYMQAADIDGNGTTLNLSLVQC-  384 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~-----~~l~~~~~~~~~~-----~~~~l~~~~d~~~~g~~~~~~~~~~-  384 (483)
                      ..+++++..++++|..+|.|++|.|+.+||.     .+++.+|..++..     +++.++..+|.+++|.+....+... 
T Consensus         9 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~   88 (191)
T 1uhk_A            9 FDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGW   88 (191)
T ss_dssp             TTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHH
Confidence            3467888999999999999999999999999     8999999988887     6899999999999998433332211 


Q ss_pred             ---------------hhHHH----HHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCC
Q 048594          385 ---------------KDTSL----KDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDG  444 (483)
Q Consensus       385 ---------------~~~~~----~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g  444 (483)
                                     .+.++    .+|+.+|+|+        +|+|+.+||+.+++.+|.. +++++..++..+|.|+||
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~--------~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG  160 (191)
T 1uhk_A           89 KKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQ--------NGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESG  160 (191)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTC--------SSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTS
T ss_pred             HHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCC
Confidence                           12233    8999999999        9999999999999999988 899999999999999999


Q ss_pred             cccHHHHHHHHHcC
Q 048594          445 RISYEEFCATMKTG  458 (483)
Q Consensus       445 ~i~~~ef~~~~~~~  458 (483)
                      .|+|+||+.+|...
T Consensus       161 ~i~~~eF~~~~~~~  174 (191)
T 1uhk_A          161 QLDVDEMTRQHLGF  174 (191)
T ss_dssp             CEEHHHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHH
Confidence            99999999998764

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.74  E-value=7.7e-18  Score=144.66  Aligned_cols=125  Identities=22%  Similarity=0.324  Sum_probs=111.4

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh-----------hhchhHHHHHHh
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL-----------VQCKDTSLKDFN  393 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~-----------~~~~~~~~~~F~  393 (483)
                      ++++|..+|.|++|.|+.+||..+++.+|..++..++..++..   +++|.+....+           ......+..+|+
T Consensus         7 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~   83 (145)
T 2bl0_B            7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFR   83 (145)
T ss_dssp             HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHH
T ss_pred             HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHH
Confidence            8999999999999999999999999999999999999999998   67776222211           123567899999


Q ss_pred             hcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCC
Q 048594          394 IFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTH  460 (483)
Q Consensus       394 ~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~  460 (483)
                      .+|+++        +|+|+.+||..+++.+|.. ++++++.++..+|.|+||.|+|+||+.+|..+..
T Consensus        84 ~~D~d~--------~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~  143 (145)
T 2bl0_B           84 ALDKEG--------NGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVTGYP  143 (145)
T ss_dssp             HHCSSS--------SSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHHSSC
T ss_pred             HhCCCC--------CCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHhcCC
Confidence            999999        9999999999999999988 9999999999999999999999999999987643

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.74  E-value=9.6e-18  Score=153.86  Aligned_cols=135  Identities=16%  Similarity=0.247  Sum_probs=112.8

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCC--CCCHHHHHHHH-------HhccCCCCCceeechhhhc-
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS--TLTEVDVKQYM-------QAADIDGNGTTLNLSLVQC-  384 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~--~~~~~~~~~l~-------~~~d~~~~g~~~~~~~~~~-  384 (483)
                      ..++.+++..++++|..+|.|++|.|+.+||..+++.+|.  .++.+++..++       ..+|.+++|.+....+... 
T Consensus        28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~  107 (208)
T 2hpk_A           28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEAN  107 (208)
T ss_dssp             --------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHH
T ss_pred             HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            5677888999999999999999999999999999999988  89999999999       9999999998443332211 


Q ss_pred             ------------------hhH-HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCc
Q 048594          385 ------------------KDT-SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGR  445 (483)
Q Consensus       385 ------------------~~~-~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~  445 (483)
                                        .+. +..+|+.||+|+        +|+|+.+||..+++.+| .++++++.++..+|.|+||.
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~--------~G~Is~~El~~~l~~~g-~~~~~~~~~~~~~D~d~dG~  178 (208)
T 2hpk_A          108 RVFAEAERERERRGEPSLIALLSNSYYDVLDDDG--------DGTVDVDELKTMMKAFD-VPQEAAYTFFEKADTDKSGK  178 (208)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTC--------SSSBCHHHHHHHHHHTT-SCTTHHHHHHHHHCTTCCSS
T ss_pred             HHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCC--------CCcCCHHHHHHHHHHhC-cCHHHHHHHHHHhCCCCCCc
Confidence                              122 788999999999        99999999999999999 47889999999999999999


Q ss_pred             ccHHHHHHHHHcC
Q 048594          446 ISYEEFCATMKTG  458 (483)
Q Consensus       446 i~~~ef~~~~~~~  458 (483)
                      |+|+||+.+|...
T Consensus       179 I~~~EF~~~~~~~  191 (208)
T 2hpk_A          179 LERTELVHLFRKF  191 (208)
T ss_dssp             BCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHH
Confidence            9999999998654

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.74  E-value=1.9e-17  Score=149.52  Aligned_cols=136  Identities=13%  Similarity=0.161  Sum_probs=119.3

Q ss_pred             hhccchHHHhhHHHHHhhc-CCCCCCCcCHHHHHHHHHhc----CCCCCHHHHHHHH-----------HhccCCCCCcee
Q 048594          314 VENLPAEEIQKHKETFKQM-DTNDSGTLTYDEFKAGLSKL----GSTLTEVDVKQYM-----------QAADIDGNGTTL  377 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~-D~d~~G~l~~~el~~~l~~~----~~~~~~~~~~~l~-----------~~~d~~~~g~~~  377 (483)
                      +..++..+...++++|+.+ |.|++|+|+.+||..+++.+    |..++..++..++           ..+|.|++|.+.
T Consensus         3 ~~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~   82 (191)
T 2ccm_A            3 AHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVT   82 (191)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEE
T ss_pred             hhhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEC
Confidence            3456778889999999999 99999999999999999999    9999999999998           999999999843


Q ss_pred             echhh------------------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHc
Q 048594          378 NLSLV------------------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVD  439 (483)
Q Consensus       378 ~~~~~------------------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d  439 (483)
                      ...+.                  .....+..+|+.+|+|+        +|+|+.+|+..+++.+|. ++++++.++..+|
T Consensus        83 ~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~--------dG~I~~~E~~~~l~~~g~-~~~~~~~~~~~~D  153 (191)
T 2ccm_A           83 KEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSG--------DNIIDKHEYSTVYMSYGI-PKSDCDAAFDTLS  153 (191)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTC--------SSBCCHHHHHHHHHTTTC-CHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHhCC-CHHHHHHHHHHhC
Confidence            33221                  11356889999999999        999999999999999984 7889999999999


Q ss_pred             CCCCCcccHHHHHHHHHcC
Q 048594          440 RDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       440 ~~~~g~i~~~ef~~~~~~~  458 (483)
                      .|+||.|+|+||+.+|+..
T Consensus       154 ~d~dG~i~~~Ef~~~~~~~  172 (191)
T 2ccm_A          154 DGGKTMVTREIFARLWTEY  172 (191)
T ss_dssp             TTTTSCCBHHHHHHHHHHH
T ss_pred             CCCCCCcCHHHHHHHHHHH
Confidence            9999999999999998653

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.74  E-value=1.6e-17  Score=150.35  Aligned_cols=128  Identities=18%  Similarity=0.277  Sum_probs=116.2

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhh---chhHHHHHHhhcCCC
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTSLKDFNIFTKP  398 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~~~~F~~~d~~  398 (483)
                      ..+++++|..+|.|++|.|+.+||..++..+|..++++++..+|..+|.+++|.+....+..   ....++.+|+.+|++
T Consensus        26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~F~~~D~d  105 (191)
T 1y1x_A           26 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFILSMREGFRKRDSS  105 (191)
T ss_dssp             TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            45799999999999999999999999998888899999999999999999999854444332   246789999999999


Q ss_pred             CccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          399 SNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       399 ~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +        +|+|+.+||+.+++.+|.. +++++..++..+|.|+||.|+|+||+.++..
T Consensus       106 ~--------~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  157 (191)
T 1y1x_A          106 G--------DGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF  157 (191)
T ss_dssp             S--------SSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             C--------CCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            9        9999999999999999988 9999999999999999999999999999864

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.74  E-value=1.2e-17  Score=148.27  Aligned_cols=130  Identities=17%  Similarity=0.263  Sum_probs=116.0

Q ss_pred             HHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcC-CCCCHHHHHHHHHhccCCCCCceeechhhh---chhHHHHHHhhc
Q 048594          320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG-STLTEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTSLKDFNIF  395 (483)
Q Consensus       320 ~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~-~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~~~~F~~~  395 (483)
                      .....++++|..+|.|++|.|+.+||..+++.+| .+++..++..++..+|.+++|.+....+..   ....+..+|+.+
T Consensus         4 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~F~~~   83 (172)
T 2znd_A            4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTY   83 (172)
T ss_dssp             --CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999998 789999999999999999999854444332   346788999999


Q ss_pred             CCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          396 TKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       396 d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      |+++        +|+|+.+|+..++..+|.. +++++..++..+|.|++|.|+|+||+.++..
T Consensus        84 D~d~--------~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  138 (172)
T 2znd_A           84 DRDN--------SGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV  138 (172)
T ss_dssp             CTTC--------SSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             CCCC--------CCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            9999        9999999999999999988 8999999999999999999999999998864

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=99.72  E-value=1.2e-17  Score=142.76  Aligned_cols=124  Identities=18%  Similarity=0.258  Sum_probs=109.2

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhh------------chhHHH
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ------------CKDTSL  389 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~------------~~~~~~  389 (483)
                      +..++++|..+|.|++|.|+.+||..+++.+|..++..++..++.    +++|.+....+..            ..+.+.
T Consensus         4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~   79 (140)
T 1ggw_A            4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFV   79 (140)
T ss_dssp             CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHHH
Confidence            457899999999999999999999999999999999999999987    6777733322211            137889


Q ss_pred             HHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          390 KDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       390 ~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      .+|+.||+++        +|+|+.+||+++++.+|.. ++++++.++..+|. +||.|+|+||+.+|..+
T Consensus        80 ~~F~~~D~d~--------~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~~  140 (140)
T 1ggw_A           80 KGFQVFDKDA--------TGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILAN  140 (140)
T ss_dssp             HHHHTTCSSC--------SSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHCC
T ss_pred             HHHHHhCCCC--------CCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhcC
Confidence            9999999999        9999999999999999988 99999999999999 99999999999998753

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.72  E-value=2.5e-17  Score=150.25  Aligned_cols=134  Identities=24%  Similarity=0.367  Sum_probs=111.3

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh---------hchhHH
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV---------QCKDTS  388 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~~~~  388 (483)
                      ...++..++++|..+|.|++|.|+.+||..+++.+|..+++.++..+|..+|.+++|.+....+.         ...+.+
T Consensus        32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~  111 (204)
T 3e3r_A           32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVI  111 (204)
T ss_dssp             --------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHH
T ss_pred             CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHH
Confidence            45677899999999999999999999999999999999999999999999999999984333222         234678


Q ss_pred             HHHHhhcCCCCccchhccccccccHHHHHHHHhhC-------CCC-ChHHHHHHHHHHcC-CCCCcccHHHHHHHHHcCC
Q 048594          389 LKDFNIFTKPSNILIRIMISIYITADELEAAFKEY-------NMG-DDATIKEIMFEVDR-DKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       389 ~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~-------~~~-~~~~~~~~~~~~d~-~~~g~i~~~ef~~~~~~~~  459 (483)
                      ..+|+.+|.++        +|+|+.+||..++..+       |.. ++++++.++..+|. |+||.|+|+||+.+|..-.
T Consensus       112 ~~~F~~~D~d~--------~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~  183 (204)
T 3e3r_A          112 AAAFAKLDRSG--------DGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVS  183 (204)
T ss_dssp             HHHHHHHCTTC--------SSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHH
T ss_pred             HHHHHHhCcCC--------CCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcC
Confidence            99999999999        9999999999999854       555 67789999999998 9999999999999987643

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=99.71  E-value=9.9e-19  Score=171.50  Aligned_cols=198  Identities=14%  Similarity=0.255  Sum_probs=144.6

Q ss_pred             CCHHHHHHHHHhC---ccCCCCCCCHHHHHcC------CcCCCCCCCC----------------CCCC------CCHHHH
Q 048594          245 ISSSAKDLIRRML---IRDPNNQITVAQILKH------PWLNYENGEA----------------WDRP------IDTAII  293 (483)
Q Consensus       245 ~~~~~~~li~~~L---~~dP~~R~t~~e~L~h------~~~~~~~~~~----------------~~~~------~~~~~~  293 (483)
                      ++.++.+|.++++   ..+|..|.+.++.+.|      +|+.......                ...+      ....++
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~g~~~~e~q~~~~vl   96 (323)
T 1ij5_A           17 VHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASLL   96 (323)
T ss_dssp             HHHHHHHHHHHHTTCCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhhhHHHHHHHHhhcCCCCCcchhhHHHH
Confidence            4567889999887   8999999999999988      8876220000                0000      001122


Q ss_pred             HHHH-HHhhhhHHHHHHHHHhhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCC
Q 048594          294 SRVK-QFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG  372 (483)
Q Consensus       294 ~~~~-~~~~~~kl~~~~l~~i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~  372 (483)
                      .+++ +|..++.+++     ++..++.+++..++++|..+|.|++|+|+.+||..+|..+|..++..++..++..+|.++
T Consensus        97 ~~l~~~f~~~~~lkk-----~~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d~  171 (323)
T 1ij5_A           97 KDLEDDASGYNRLRP-----SKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDT  171 (323)
T ss_dssp             HHC------------------CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHhhhHHH-----HHHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCC
Confidence            2222 3333333332     345688899999999999999999999999999999999999999999999999999999


Q ss_pred             CCceeechhh---hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHH-HHHHHcCCCCCccc
Q 048594          373 NGTTLNLSLV---QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKE-IMFEVDRDKDGRIS  447 (483)
Q Consensus       373 ~g~~~~~~~~---~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~-~~~~~d~~~~g~i~  447 (483)
                      +|.+....+.   .....+..+|+.||.++        +|+|+.+||..++  +|.. ++.++.. ++..+|.|++|.|+
T Consensus       172 ~G~I~f~ef~~l~~~~~~l~~~F~~~D~d~--------dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is  241 (323)
T 1ij5_A          172 KGRMSYITLVAVANDLAALVADFRKIDTNS--------NGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVG  241 (323)
T ss_dssp             SSTHHHHHHTTSHHHHHTSCCCHHHHCTTC--------CSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEE
T ss_pred             CCcCcHHHHHhhhhHHHHHHHHHHHHCCCC--------CCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEe
Confidence            9984332222   23455778899999999        9999999999999  6766 8889999 99999999999999


Q ss_pred             HHHHHHHHHc
Q 048594          448 YEEFCATMKT  457 (483)
Q Consensus       448 ~~ef~~~~~~  457 (483)
                      |+||+.+|..
T Consensus       242 ~~EF~~~l~~  251 (323)
T 1ij5_A          242 FSEYVHLGLC  251 (323)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999988754

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.71  E-value=7.6e-17  Score=141.65  Aligned_cols=129  Identities=13%  Similarity=0.208  Sum_probs=109.7

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHH----HhcCCCCCHHHHHHH-----------HHhccCCCCCceeechhhhc-
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGL----SKLGSTLTEVDVKQY-----------MQAADIDGNGTTLNLSLVQC-  384 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l----~~~~~~~~~~~~~~l-----------~~~~d~~~~g~~~~~~~~~~-  384 (483)
                      ++..++++|..+|.|++|.|+.+||..++    +.+|..++..++..+           |..+|.+++|.+....+... 
T Consensus         2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~   81 (166)
T 3akb_A            2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA   81 (166)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred             HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            35679999999999999999999999975    456999988887755           79999999998433322211 


Q ss_pred             ---------------hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHH
Q 048594          385 ---------------KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYE  449 (483)
Q Consensus       385 ---------------~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  449 (483)
                                     .+.+..+|+.+|+++        +|+|+.+|+..++..+| .+++++..++..+|.|+||.|+|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~--------~G~i~~~E~~~~l~~~~-~~~~~~~~~~~~~D~d~dg~i~~~  152 (166)
T 3akb_A           82 VKRLRDKPDRFAEMARPFLHAALGVADTDG--------DGAVTVADTARALTAFG-VPEDLARQAAAALDTDGDGKVGET  152 (166)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHCSSS--------SSCCBHHHHHHHHHHTT-CCHHHHHHHHHHHCTTCSSBCCHH
T ss_pred             HHHhccCccchHHHHHHHHHHHHHHhCCCC--------CCcCCHHHHHHHHHHhC-CCHHHHHHHHHHhCCCCCCcCcHH
Confidence                           233889999999999        99999999999999998 588999999999999999999999


Q ss_pred             HHHHHHHcC
Q 048594          450 EFCATMKTG  458 (483)
Q Consensus       450 ef~~~~~~~  458 (483)
                      ||+.+|...
T Consensus       153 ef~~~~~~~  161 (166)
T 3akb_A          153 EIVPAFARY  161 (166)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998654

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.71  E-value=1.6e-17  Score=157.83  Aligned_cols=113  Identities=18%  Similarity=0.241  Sum_probs=90.8

Q ss_pred             ceEEeeeecccCceeEEEEEECCCCCE--EEEEEeccCCCC---------------------------------------
Q 048594           50 HFTIAEELCRGESGRIYLCTENSTGLQ--FACKSISKTSKS---------------------------------------   88 (483)
Q Consensus        50 ~y~~~~~lg~G~~g~V~~~~~~~~~~~--~avK~~~~~~~~---------------------------------------   88 (483)
                      .|.+.+.||+|+||.||+|.+..+|+.  ||||++......                                       
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            478999999999999999999778999  999986543100                                       


Q ss_pred             -------------CcCeEEEeccCC-C----ChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeeCCCCCeEEE
Q 048594           89 -------------DEGYLKREHCDG-G----TLVDRISDRERYTERAAASVFRSVVNALHACH-SNGIMHRDLKPENFIF  149 (483)
Q Consensus        89 -------------~~~~lv~E~~~g-~----~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH-~~~ivH~dlkp~NIll  149 (483)
                                   ...|+|||||.+ |    +|.+....   .++..+..++.||+.+|.||| +.||+||||||+|||+
T Consensus       128 ~~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl  204 (258)
T 1zth_A          128 KEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMY  204 (258)
T ss_dssp             HHTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEE
T ss_pred             HhCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE
Confidence                         001899999942 3    66666432   235578899999999999999 9999999999999999


Q ss_pred             eeCCCCCcEEEeecccceecc
Q 048594          150 TTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus       150 ~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                         +.  .++|+|||+|....
T Consensus       205 ---~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          205 ---ID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             ---SS--SEEECCCTTCEETT
T ss_pred             ---cC--cEEEEECcccccCC
Confidence               44  89999999997653

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=99.71  E-value=3.4e-17  Score=142.27  Aligned_cols=130  Identities=31%  Similarity=0.485  Sum_probs=112.0

Q ss_pred             hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------hchhHH
Q 048594          319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------QCKDTS  388 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~~~~~~  388 (483)
                      ++++..++++|..+|.|++|+|+.+|| .++..++..+   ++..++..+|.+++|.+....+.          ...+.+
T Consensus         2 ~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~   77 (155)
T 3ll8_B            2 ADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKL   77 (155)
T ss_dssp             CHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHH
Confidence            567889999999999999999999999 6777777554   78899999999999983332222          234778


Q ss_pred             HHHHhhcCCCCccchhccccccccHHHHHHHHhh-CCCC-ChHHHHHHHHH----HcCCCCCcccHHHHHHHHHcCCC
Q 048594          389 LKDFNIFTKPSNILIRIMISIYITADELEAAFKE-YNMG-DDATIKEIMFE----VDRDKDGRISYEEFCATMKTGTH  460 (483)
Q Consensus       389 ~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~-~~~~-~~~~~~~~~~~----~d~~~~g~i~~~ef~~~~~~~~~  460 (483)
                      ..+|+.+|.++        +|+|+.+||++++.. +|.. +++++..++..    +|.|+||.|+|+||+.+|.....
T Consensus        78 ~~~F~~~D~d~--------~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~  147 (155)
T 3ll8_B           78 RFAFRIYDMDK--------DGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDI  147 (155)
T ss_dssp             HHHHHHHCTTC--------SSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGCG
T ss_pred             HHHHHHhCCCC--------CCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccCc
Confidence            99999999999        999999999999999 5877 89999999988    99999999999999999977643

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.71  E-value=3.2e-17  Score=149.64  Aligned_cols=132  Identities=14%  Similarity=0.232  Sum_probs=115.5

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh--------------
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL--------------  381 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~--------------  381 (483)
                      .++.+++..++++|..+|.|++|+|+.+||..+ ..+|..++   +..+|..+|.+++|.+....+              
T Consensus        22 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~   97 (202)
T 2bec_A           22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDED   97 (202)
T ss_dssp             CCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhc
Confidence            578889999999999999999999999999999 88887665   889999999999998322221              


Q ss_pred             ------------hhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC-CCC-ChHHHHHHHHH----HcCCCC
Q 048594          382 ------------VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY-NMG-DDATIKEIMFE----VDRDKD  443 (483)
Q Consensus       382 ------------~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~-~~~-~~~~~~~~~~~----~d~~~~  443 (483)
                                  ....+.+..+|+.||.|+        +|+|+.+||..++..+ |.. +++++..++..    +|.|+|
T Consensus        98 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~--------dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~d  169 (202)
T 2bec_A           98 TETQDPKKPEPLNSRRNKLHYAFQLYDLDR--------DGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGD  169 (202)
T ss_dssp             HC-----CCCCTTSHHHHHHHHHHHHCTTC--------SSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCS
T ss_pred             ccccccccccccccHHHHHHHHHHHhCCCC--------CCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCC
Confidence                        123566899999999999        9999999999999999 987 89999999888    999999


Q ss_pred             CcccHHHHHHHHHcCC
Q 048594          444 GRISYEEFCATMKTGT  459 (483)
Q Consensus       444 g~i~~~ef~~~~~~~~  459 (483)
                      |.|+|+||+.+|....
T Consensus       170 G~Is~~EF~~~~~~~~  185 (202)
T 2bec_A          170 GAVSFVEFTKSLEKMD  185 (202)
T ss_dssp             SSEEHHHHHHTTTTSC
T ss_pred             CcCcHHHHHHHHHHhC
Confidence            9999999999987654

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=99.71  E-value=5.5e-17  Score=143.94  Aligned_cols=129  Identities=18%  Similarity=0.245  Sum_probs=111.4

Q ss_pred             hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcC----CCCCHHH-H--------HHHHHhccCCCCCceeechhh---
Q 048594          319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG----STLTEVD-V--------KQYMQAADIDGNGTTLNLSLV---  382 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~----~~~~~~~-~--------~~l~~~~d~~~~g~~~~~~~~---  382 (483)
                      ++++..++++|..+|.|++|+|+.+||..+++.++    ..++..+ +        +.++..+|  ++|.+....+.   
T Consensus         2 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~   79 (174)
T 1q80_A            2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSM   79 (174)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHH
Confidence            56788999999999999999999999999999998    8898877 6        46788889  78873332221   


Q ss_pred             -----------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHH
Q 048594          383 -----------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEF  451 (483)
Q Consensus       383 -----------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef  451 (483)
                                 .....+..+|+.+|+++        +|+|+.+||+.++..+|. ++++++.++..+|.|+||.|+|+||
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~--------~G~i~~~e~~~~l~~~g~-~~~~~~~~~~~~D~d~dg~i~~~ef  150 (174)
T 1q80_A           80 KEMVKNPEAKSVVEGPLPLFFRAVDTNE--------DNNISRDEYGIFFGMLGL-DKTMAPASFDAIDTNNDGLLSLEEF  150 (174)
T ss_dssp             HHHTTSTTCHHHHHTHHHHHHHHHCTTS--------SSSBCHHHHHHHHHHHTC-CGGGHHHHHHHHCTTCSSSBCHHHH
T ss_pred             HHHcCcccHHHHHHHHHHHHHHHhCCCC--------CCcccHHHHHHHHHHcCC-CHHHHHHHHHHhCCCCCceEeHHHH
Confidence                       12467899999999999        999999999999999975 7889999999999999999999999


Q ss_pred             HHHHHcC
Q 048594          452 CATMKTG  458 (483)
Q Consensus       452 ~~~~~~~  458 (483)
                      +.+|...
T Consensus       151 ~~~~~~~  157 (174)
T 1q80_A          151 VIAGSDF  157 (174)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998654

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=99.71  E-value=6.6e-17  Score=163.02  Aligned_cols=135  Identities=30%  Similarity=0.522  Sum_probs=121.1

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhh----------c
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ----------C  384 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~----------~  384 (483)
                      ..++.+++..++++|+.+|.|++|.|+.+||..+|+.++..++.++++.+|+.+|.|++|.+...++..          .
T Consensus       304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~  383 (450)
T 3sg6_A          304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS  383 (450)
T ss_dssp             -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------C
T ss_pred             ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccch
Confidence            346778889999999999999999999999999999999999999999999999999999844433321          2


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+.+..+|+.||+|+        +|+|+.+||+.+|+.+|.. ++++++.++..+|.|+||.|+|+||+.+|..
T Consensus       384 ~e~l~~aFk~fD~D~--------dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~~  449 (450)
T 3sg6_A          384 EEEIREAFRVFDKDG--------NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA  449 (450)
T ss_dssp             HHHHHHHHHHHCTTC--------SSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC-
T ss_pred             hhHHHHHHHHhCCCC--------CCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence            456899999999999        9999999999999999988 9999999999999999999999999999853

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=99.71  E-value=1.1e-17  Score=155.06  Aligned_cols=138  Identities=21%  Similarity=0.320  Sum_probs=114.7

Q ss_pred             hhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHh-cCCCCCHHHHHHHHHhc---------cCCCCCceeechhh
Q 048594          313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSK-LGSTLTEVDVKQYMQAA---------DIDGNGTTLNLSLV  382 (483)
Q Consensus       313 i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~-~~~~~~~~~~~~l~~~~---------d~~~~g~~~~~~~~  382 (483)
                      +...++.+++..++++|..+|.|++|+|+.+||..++.. +|..++..++..++..+         +.+++|.+....++
T Consensus        38 ~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~  117 (219)
T 3cs1_A           38 IPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFL  117 (219)
T ss_dssp             SCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHH
T ss_pred             hcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHH
Confidence            345678899999999999999999999999999999988 79888777776665533         33677763333222


Q ss_pred             ---------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCC-C-ChHHHHHHHHHHcCCCCCcccHHHH
Q 048594          383 ---------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM-G-DDATIKEIMFEVDRDKDGRISYEEF  451 (483)
Q Consensus       383 ---------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~-~-~~~~~~~~~~~~d~~~~g~i~~~ef  451 (483)
                               ...+.+..+|+.||+|+        +|+|+.+||++++..+|. . ++++++.+|..+|.|+||.|+|+||
T Consensus       118 ~~~~~~~~~~~~~~l~~~F~~~D~d~--------~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~EF  189 (219)
T 3cs1_A          118 EFRLMLCYIYDFFELTVMFDEIDASG--------NMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEF  189 (219)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSSS--------SSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHHHH
T ss_pred             HHHHHHhccchHHHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHHHH
Confidence                     23467899999999999        999999999999999875 4 7888999999999999999999999


Q ss_pred             HHHHHcC
Q 048594          452 CATMKTG  458 (483)
Q Consensus       452 ~~~~~~~  458 (483)
                      +.+|...
T Consensus       190 ~~~~~~~  196 (219)
T 3cs1_A          190 AAWASAV  196 (219)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999754

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.71  E-value=5e-17  Score=145.53  Aligned_cols=134  Identities=16%  Similarity=0.203  Sum_probs=116.5

Q ss_pred             cchHHHhhHHHHHhhc-CCCCCCCcCHHHHHHHHHhcC----CCCCHHHHHHH-----------HHhccCCCCCceeech
Q 048594          317 LPAEEIQKHKETFKQM-DTNDSGTLTYDEFKAGLSKLG----STLTEVDVKQY-----------MQAADIDGNGTTLNLS  380 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~-D~d~~G~l~~~el~~~l~~~~----~~~~~~~~~~l-----------~~~~d~~~~g~~~~~~  380 (483)
                      ++.++...++++|..+ |.|++|.|+.+||..++..++    ..++..++..+           |..+|.+++|.+....
T Consensus         2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~E   81 (185)
T 2sas_A            2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE   81 (185)
T ss_dssp             CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred             cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence            4567788999999999 999999999999999999998    88898888765           9999999999833332


Q ss_pred             hh------------------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCC
Q 048594          381 LV------------------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDK  442 (483)
Q Consensus       381 ~~------------------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~  442 (483)
                      +.                  .....+..+|+.+|.++        +|+|+.+|+.++++.+|. +++++..+|..+|.|+
T Consensus        82 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~--------dG~Is~~E~~~~l~~~g~-~~~~~~~~~~~~D~d~  152 (185)
T 2sas_A           82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSG--------DGIVDLEEFQNYCKNFQL-QCADVPAVYNVITDGG  152 (185)
T ss_dssp             HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTS--------SSCCCHHHHHHHTTSSCC-CCSSHHHHHHHHHTTT
T ss_pred             HHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCC--------CCeEcHHHHHHHHHHhCC-CHHHHHHHHHHhcCCC
Confidence            21                  12367889999999999        999999999999999986 6889999999999999


Q ss_pred             CCcccHHHHHHHHHcCC
Q 048594          443 DGRISYEEFCATMKTGT  459 (483)
Q Consensus       443 ~g~i~~~ef~~~~~~~~  459 (483)
                      ||.|+|+||+.+|....
T Consensus       153 dG~i~~~ef~~~~~~~~  169 (185)
T 2sas_A          153 KVTFDLNRYKELYYRLL  169 (185)
T ss_dssp             TSCCSHHHHHHHHHHHH
T ss_pred             CCcCcHHHHHHHHHHHh
Confidence            99999999999987653

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=99.70  E-value=1.2e-17  Score=155.58  Aligned_cols=138  Identities=21%  Similarity=0.288  Sum_probs=117.2

Q ss_pred             HhhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHH-HHHhcCCCCCHHHHHHHHHhc---------cCCCCCceeechh
Q 048594          312 VIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKA-GLSKLGSTLTEVDVKQYMQAA---------DIDGNGTTLNLSL  381 (483)
Q Consensus       312 ~i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~-~l~~~~~~~~~~~~~~l~~~~---------d~~~~g~~~~~~~  381 (483)
                      .++..++.+++..++++|..+|.|++|.|+.+||.. +++.+|..++..++..++..+         |.+++|.+....+
T Consensus        40 ~l~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF  119 (226)
T 2lvv_A           40 AIPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEF  119 (226)
T ss_dssp             HSCSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCH
T ss_pred             HhchhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHH
Confidence            345567899999999999999999999999999998 667778888877787887777         9999998444433


Q ss_pred             hh---------chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC---CCCChHHHHHHHHHHcCCCCCcccHH
Q 048594          382 VQ---------CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY---NMGDDATIKEIMFEVDRDKDGRISYE  449 (483)
Q Consensus       382 ~~---------~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~---~~~~~~~~~~~~~~~d~~~~g~i~~~  449 (483)
                      +.         ..+.+..+|+.||+|+        +|+|+.+||+.+|+.+   |.. ..++..+|..+|.|+||.|+|+
T Consensus       120 ~~~~~~~~~~~~~~~l~~~F~~~D~d~--------dG~Is~~El~~~l~~~~~~g~~-~~e~~~~~~~~D~d~dG~Is~~  190 (226)
T 2lvv_A          120 LEFRLMLCYIYDIFELTVMFDTMDKDG--------SLLLELQEFKEALPKLKEWGVD-ITDATTVFNEIDTNGSGVVTFD  190 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSCSS--------CCEECHHHHHHHHHHHHHHTCC-CCSCHHHHHHHCCSCSSCEEHH
T ss_pred             HHHHHHHHhccCHHHHHHHHHHHcCCC--------CCeEcHHHHHHHHHHHhhcCCC-HHHHHHHHHHhCCCCCCcEeHH
Confidence            32         2457899999999999        9999999999999987   765 3459999999999999999999


Q ss_pred             HHHHHHHcC
Q 048594          450 EFCATMKTG  458 (483)
Q Consensus       450 ef~~~~~~~  458 (483)
                      ||+.+|...
T Consensus       191 EF~~~~~~~  199 (226)
T 2lvv_A          191 EFSCWAVTK  199 (226)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999999654

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.70  E-value=3.1e-17  Score=145.88  Aligned_cols=127  Identities=17%  Similarity=0.216  Sum_probs=114.3

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhc-C-------CCCCHHHHHHHHHhccCCCCCceeechhhh---chhHHH
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL-G-------STLTEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTSL  389 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~-~-------~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~~  389 (483)
                      ++..++++|..+| |++|.|+.+||..+++.+ |       ..++..++..++..+|.+++|.+....+..   ....+.
T Consensus         2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~   80 (173)
T 1alv_A            2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQ   80 (173)
T ss_dssp             HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHH
Confidence            5678999999999 999999999999999998 6       788999999999999999999854444332   346788


Q ss_pred             HHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          390 KDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       390 ~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+|+.||+++        +|+|+.+||..+++.+|.. ++++++.++..+| |++|.|+|+||+.++..
T Consensus        81 ~~F~~~D~d~--------~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~  140 (173)
T 1alv_A           81 AIYKQFDVDR--------SGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR  140 (173)
T ss_dssp             HHHHHHCTTC--------CSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHCCCC--------CCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence            9999999999        9999999999999999988 8999999999999 99999999999998864

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=99.69  E-value=7.2e-17  Score=139.06  Aligned_cols=124  Identities=15%  Similarity=0.257  Sum_probs=110.1

Q ss_pred             hHHHhhHHHHHhhcCCCC-CCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------hchhH
Q 048594          319 AEEIQKHKETFKQMDTND-SGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------QCKDT  387 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~-~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~~~~~  387 (483)
                      .+++..++++|..+|.|+ +|.|+.+||..+++.+|..++..++..++..+|.+    +....+.          ...+.
T Consensus        10 ~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~   85 (146)
T 2qac_A           10 LEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEE   85 (146)
T ss_dssp             HHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHH
T ss_pred             HHHHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHH
Confidence            456678999999999999 99999999999999999999999999999999987    1111111          12567


Q ss_pred             HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          388 SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       388 ~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      +..+|+.||+++        +|+|+.+||+.++..+|.. ++++++.++..+  |+||.|+|+||+.+|.
T Consensus        86 l~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~  145 (146)
T 2qac_A           86 LIKMFAHFDNNC--------TGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL  145 (146)
T ss_dssp             HHHHHHTTCTTC--------SSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred             HHHHHHHhCCCC--------CCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence            899999999999        9999999999999999988 999999999999  9999999999999985

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=99.69  E-value=4.9e-17  Score=149.23  Aligned_cols=141  Identities=19%  Similarity=0.286  Sum_probs=117.3

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh------------
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV------------  382 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~------------  382 (483)
                      ..++.+++..++++|..+|.|++|+|+.+||..++ .+|..++.   +++++.+|.+++|.+....+.            
T Consensus        21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~   96 (208)
T 2ct9_A           21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDN   96 (208)
T ss_dssp             HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC--
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccch
Confidence            35788899999999999999999999999999865 67776654   468899999999983322211            


Q ss_pred             -------------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC-CCC-ChHHHHHH----HHHHcCCCC
Q 048594          383 -------------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY-NMG-DDATIKEI----MFEVDRDKD  443 (483)
Q Consensus       383 -------------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~-~~~-~~~~~~~~----~~~~d~~~~  443 (483)
                                   ...+.+..+|+.||+|+        +|+|+.+||..++..+ |.. ++++++.+    +..+|.|+|
T Consensus        97 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~--------dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~d  168 (208)
T 2ct9_A           97 EKSKDVNGPEPLNSRSNKLHFAFRLYDLDK--------DDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGD  168 (208)
T ss_dssp             ---------CCTTSHHHHHHHHHHHHCTTC--------SSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSS
T ss_pred             hhhcccccccccccHHHHHHHHHHHHCCCC--------CCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence                         14567899999999999        9999999999999986 887 88888888    999999999


Q ss_pred             CcccHHHHHHHHHcCCCCCccccc
Q 048594          444 GRISYEEFCATMKTGTHLRGTSYR  467 (483)
Q Consensus       444 g~i~~~ef~~~~~~~~~~~~~~~~  467 (483)
                      |.|+|+||+.+|.......+.+-+
T Consensus       169 G~Is~~EF~~~~~~~~~~~~~~~~  192 (208)
T 2ct9_A          169 SAISFTEFVKVLEKVDVEQKMSIR  192 (208)
T ss_dssp             SSEEHHHHHHTTTTSCGGGSHHHH
T ss_pred             CcCcHHHHHHHHhccChHHHhhHH
Confidence            999999999999877655444443

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=99.68  E-value=8.5e-17  Score=146.40  Aligned_cols=130  Identities=15%  Similarity=0.228  Sum_probs=115.6

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCC-----CCCHHHHHHHHHhccCCCCCceeechhhh---chhHH
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS-----TLTEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTS  388 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~-----~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~  388 (483)
                      .+.+++..+++ |..+|.|++|.|+.+||..+++.+|.     .++.++++.++..+|.+++|.+....+..   ..+.+
T Consensus        27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~~~~  105 (198)
T 1juo_A           27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGW  105 (198)
T ss_dssp             CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHH
T ss_pred             CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHH
Confidence            44557778999 99999999999999999999999986     67999999999999999999855544332   34678


Q ss_pred             HHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          389 LKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       389 ~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +.+|+.||+++        +|+|+.+||+.+++.+|.. ++++++.++..+  |+||.|+|+||+.++..
T Consensus       106 ~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~  165 (198)
T 1juo_A          106 RQHFISFDTDR--------SGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVK  165 (198)
T ss_dssp             HHHHHTTCTTC--------CSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHhCCCC--------CCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence            99999999999        9999999999999999988 899999999999  99999999999998854

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=99.68  E-value=1.3e-16  Score=134.61  Aligned_cols=120  Identities=25%  Similarity=0.341  Sum_probs=105.8

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh------------hhchhHHHHHH
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL------------VQCKDTSLKDF  392 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~------------~~~~~~~~~~F  392 (483)
                      ++++|..+|.|++|.|+.+||..++..++..++.+++..+|+.+|.+++|.+....+            ......+..+|
T Consensus         2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f   81 (134)
T 1jfj_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY   81 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence            678999999999999999999999999999999999999999999999998322211            12345689999


Q ss_pred             hhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          393 NIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       393 ~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      +.+|.++        +|+|+.+|+..++..+|..  . +..++..+|.|++|.|+|+||+.+|
T Consensus        82 ~~~D~d~--------~G~i~~~e~~~~l~~~~~~--~-~~~~~~~~D~~~dg~i~~~ef~~~l  133 (134)
T 1jfj_A           82 KLMDVDG--------DGKLTKEEVTSFFKKHGIE--K-VAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHCCSS--------SSEEEHHHHHHHHTTTTCH--H-HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             HHHCCCC--------CCccCHHHHHHHHHHhCHH--H-HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence            9999999        9999999999999988752  2 8999999999999999999999876

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=99.67  E-value=2.9e-17  Score=147.58  Aligned_cols=137  Identities=15%  Similarity=0.235  Sum_probs=116.7

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhc------CCCCCHHHHHHHH---------HhccCCCCCceee
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL------GSTLTEVDVKQYM---------QAADIDGNGTTLN  378 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~------~~~~~~~~~~~l~---------~~~d~~~~g~~~~  378 (483)
                      +..++.+++..++++|..+|.|++|+|+.+||..+++.+      |..++..++..++         ..+|.+++|.+..
T Consensus         5 ~~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~   84 (186)
T 2hps_A            5 TESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVN   84 (186)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHH
T ss_pred             cccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccH
Confidence            445678889999999999999999999999999999877      8888999999884         9999999887322


Q ss_pred             chhh--------hchhHHHHHH--hhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCccc
Q 048594          379 LSLV--------QCKDTSLKDF--NIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRIS  447 (483)
Q Consensus       379 ~~~~--------~~~~~~~~~F--~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~  447 (483)
                      ....        ...+.+..+|  +.||+++        +|+|+.+||.+++..+|.. +++++..++..+|.|+||.|+
T Consensus        85 ~E~~~~~~~~~~~~~~~~~~~f~~~~fD~d~--------~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~  156 (186)
T 2hps_A           85 ATDSLLKMKGEEKAMAVIQSLIMYDCIDTDK--------DGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQIS  156 (186)
T ss_dssp             HHHHHHHCCTHHHHHTTHHHHHHHHHHCTTC--------SSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEE
T ss_pred             HHHHHHHhcCChHHHHHHHHHHHHHHccCCC--------CCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCc
Confidence            2211        1124556667  8899999        9999999999999999977 899999999999999999999


Q ss_pred             HHHHHHHHHcC
Q 048594          448 YEEFCATMKTG  458 (483)
Q Consensus       448 ~~ef~~~~~~~  458 (483)
                      |+||+.+|...
T Consensus       157 ~~ef~~~~~~~  167 (186)
T 2hps_A          157 RDEFLVTVNDF  167 (186)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998654

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=99.67  E-value=4e-16  Score=137.79  Aligned_cols=121  Identities=17%  Similarity=0.224  Sum_probs=108.5

Q ss_pred             HHHhhcCCCCCCCcCHHHHHHHHHhcCC-----CCCHHHHHHHHHhccCCCCCceeechhhh---chhHHHHHHhhcCCC
Q 048594          327 ETFKQMDTNDSGTLTYDEFKAGLSKLGS-----TLTEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTSLKDFNIFTKP  398 (483)
Q Consensus       327 ~~F~~~D~d~~G~l~~~el~~~l~~~~~-----~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~~~~F~~~d~~  398 (483)
                      +.|..+|.|++|.|+.+||..+++.+|.     .++..+++.++..+|.+++|.+....+..   ..+.+..+|+.+|++
T Consensus         5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~F~~~D~d   84 (167)
T 1gjy_A            5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSD   84 (167)
T ss_dssp             HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4699999999999999999999999987     67899999999999999999854444332   346789999999999


Q ss_pred             CccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          399 SNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       399 ~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +        +|+|+.+|++.+++.+|.. +++++..++..+  |++|.|+|+||+.++..
T Consensus        85 ~--------~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~  134 (167)
T 1gjy_A           85 R--------SGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVK  134 (167)
T ss_dssp             C--------CSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHH
T ss_pred             C--------CCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHH
Confidence            9        9999999999999999988 899999999999  89999999999998854

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=99.67  E-value=2.9e-16  Score=138.28  Aligned_cols=121  Identities=17%  Similarity=0.216  Sum_probs=108.7

Q ss_pred             HHHhhcCCCCCCCcCHHHHHHHHHhcCC-----CCCHHHHHHHHHhccCCCCCceeechhhh---chhHHHHHHhhcCCC
Q 048594          327 ETFKQMDTNDSGTLTYDEFKAGLSKLGS-----TLTEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTSLKDFNIFTKP  398 (483)
Q Consensus       327 ~~F~~~D~d~~G~l~~~el~~~l~~~~~-----~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~~~~F~~~d~~  398 (483)
                      ..|..+|.|++|.|+.+||..+++.+|.     .++..++..++..+|.+++|.+....+..   ..+.+..+|+.||++
T Consensus         3 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~F~~~D~d   82 (165)
T 1k94_A            3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQD   82 (165)
T ss_dssp             HHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4699999999999999999999999987     67999999999999999999854444332   346789999999999


Q ss_pred             CccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          399 SNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       399 ~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +        +|+|+.+|++.+++.+|.. +++++..++..+  |++|.|+|+||+.++..
T Consensus        83 ~--------~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~  132 (165)
T 1k94_A           83 G--------SGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVK  132 (165)
T ss_dssp             C--------CSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHH
T ss_pred             C--------CceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence            9        9999999999999999988 999999999999  89999999999998864

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.66  E-value=3.2e-16  Score=139.51  Aligned_cols=115  Identities=10%  Similarity=0.130  Sum_probs=101.9

Q ss_pred             CCCCCCCcCHHHHHHHHHhc------CCCCCHHHHHHHHHhccCCCCCceeechhhh---chhHHHHHHhhcCCCCccch
Q 048594          333 DTNDSGTLTYDEFKAGLSKL------GSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTSLKDFNIFTKPSNILI  403 (483)
Q Consensus       333 D~d~~G~l~~~el~~~l~~~------~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~~~~F~~~d~~~~~~~  403 (483)
                      +.|++|+|+.+||+.+|+.+      |..++.++++.++..+|.+++|.+....+..   ...+++.+|+.|| |+    
T Consensus        14 ~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~~~l~~aF~~fD-d~----   88 (174)
T 2i7a_A           14 LVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRLVHYQHVFQKVQ-TS----   88 (174)
T ss_dssp             SCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHHHHHHHHHHHHC-SB----
T ss_pred             cCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhc-CC----
Confidence            68899999999999999998      6788999999999999999999855544432   2467899999999 99    


Q ss_pred             hccccccccHHHHHHHHhhC----CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          404 RIMISIYITADELEAAFKEY----NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       404 ~~~~~g~i~~~el~~~~~~~----~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                          +|+|+.+||+.+++.+    |.. ++++++.++..+| |+||.|+|+||+.+|..
T Consensus        89 ----~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~  142 (174)
T 2i7a_A           89 ----PGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMR  142 (174)
T ss_dssp             ----TTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHH
T ss_pred             ----CCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH
Confidence                9999999999999999    988 8999999999999 99999999999999864

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=99.65  E-value=3.2e-16  Score=140.36  Aligned_cols=137  Identities=17%  Similarity=0.164  Sum_probs=108.9

Q ss_pred             HHHhhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccC---CCCCceeechh-----
Q 048594          310 LKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADI---DGNGTTLNLSL-----  381 (483)
Q Consensus       310 l~~i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~---~~~g~~~~~~~-----  381 (483)
                      +.+++...+..++.++++.|..+|  ++|+|+.+||..++   |.++++..+..++..+|.   +++|.+....+     
T Consensus        15 l~~~~~~~~~~~~~~~~~~F~~~D--~dG~I~~~el~~~l---g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~   89 (179)
T 3a8r_A           15 LQFVTAKVGNDGWAAVEKRFNQLQ--VDGVLLRSRFGKCI---GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYE   89 (179)
T ss_dssp             HHHHHHHHCCCCHHHHHHHHHHHC--BTTBEEGGGHHHHH---TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHH
T ss_pred             HHHHHhccchhhHHHHHHHHhccC--CCCCCcHHHHHHHH---CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHH
Confidence            444555444456788999999999  89999999999864   778888889999998873   45555221111     


Q ss_pred             ----hhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHh-hCCCC--------ChHHHHHHHHHHcCCCCCcccH
Q 048594          382 ----VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFK-EYNMG--------DDATIKEIMFEVDRDKDGRISY  448 (483)
Q Consensus       382 ----~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~-~~~~~--------~~~~~~~~~~~~d~~~~g~i~~  448 (483)
                          ....+.++.+|+.||+|+        +|+|+.+||+.+++ .+|..        ++++++.++..+|.|+||.|+|
T Consensus        90 ~~~~~~~~~~l~~~F~~~D~d~--------dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~  161 (179)
T 3a8r_A           90 QLTDQGFDNRLRTFFDMVDKNA--------DGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEM  161 (179)
T ss_dssp             HHHCCCHHHHHHHHHHHHCTTC--------SSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECH
T ss_pred             HHcCCCHHHHHHHHHHHHCCCC--------CCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcH
Confidence                123567899999999999        99999999999999 78764        6788999999999999999999


Q ss_pred             HHHHHHHHcCC
Q 048594          449 EEFCATMKTGT  459 (483)
Q Consensus       449 ~ef~~~~~~~~  459 (483)
                      +||+.+|....
T Consensus       162 ~EF~~~~~~~p  172 (179)
T 3a8r_A          162 EDLEALLLQSP  172 (179)
T ss_dssp             HHHHHHHC---
T ss_pred             HHHHHHHHhCc
Confidence            99999997643

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.65  E-value=6.5e-16  Score=141.12  Aligned_cols=134  Identities=23%  Similarity=0.301  Sum_probs=114.7

Q ss_pred             hHHHhhHHHHHhhcCCC-CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh---------hchhHH
Q 048594          319 AEEIQKHKETFKQMDTN-DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV---------QCKDTS  388 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d-~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~~~~  388 (483)
                      .-...+++++|..+|.| ++|.|+.+||..+++.+|...+.++++.+|..+|.+++|.+....+.         ...+.+
T Consensus        18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~   97 (204)
T 1jba_A           18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL   97 (204)
T ss_dssp             HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred             CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHH
Confidence            34556788999999999 89999999999999999998899999999999999999984333222         235678


Q ss_pred             HHHHhhcCCCCccchhccccccccHHHHHHHHhhC----C-------------C-CChHHHHHHHHHHcCCCCCcccHHH
Q 048594          389 LKDFNIFTKPSNILIRIMISIYITADELEAAFKEY----N-------------M-GDDATIKEIMFEVDRDKDGRISYEE  450 (483)
Q Consensus       389 ~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~----~-------------~-~~~~~~~~~~~~~d~~~~g~i~~~e  450 (483)
                      ..+|+.||.++        +|+|+.+||..++..+    |             . .+++++..+|..+|.|+||.|+|+|
T Consensus        98 ~~~F~~~D~d~--------~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~E  169 (204)
T 1jba_A           98 KWTFKIYDKDR--------NGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNE  169 (204)
T ss_dssp             HHHHHHHCSSC--------SSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHH
T ss_pred             HHHHHHhCCCC--------CCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHH
Confidence            99999999999        9999999999999887    3             1 2457899999999999999999999


Q ss_pred             HHHHHHcCCC
Q 048594          451 FCATMKTGTH  460 (483)
Q Consensus       451 f~~~~~~~~~  460 (483)
                      |+.++.....
T Consensus       170 f~~~~~~~~~  179 (204)
T 1jba_A          170 FVEGARRDKW  179 (204)
T ss_dssp             HHHHHTTTTT
T ss_pred             HHHHHHcChH
Confidence            9999976543

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.64  E-value=1.5e-15  Score=141.21  Aligned_cols=136  Identities=22%  Similarity=0.314  Sum_probs=113.7

Q ss_pred             ccchHHHhhHHHHHhhcCCC--CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------h
Q 048594          316 NLPAEEIQKHKETFKQMDTN--DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------Q  383 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d--~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~  383 (483)
                      .++.+++..++++|..+|.|  ++|.|+.+||..++.. .....+..++++|..+|.+++|.+....+.          .
T Consensus        41 ~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~  119 (226)
T 2zfd_A           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAP  119 (226)
T ss_dssp             SCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSC
T ss_pred             CCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCC
Confidence            57889999999999999999  9999999999999987 333445568889999999999984333222          2


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHh----hCCCC-ChHHHHHHH----HHHcCCCCCcccHHHHHHH
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFK----EYNMG-DDATIKEIM----FEVDRDKDGRISYEEFCAT  454 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~----~~~~~-~~~~~~~~~----~~~d~~~~g~i~~~ef~~~  454 (483)
                      ..+.+..+|+.||.|+        +|+|+.+||..++.    .+|.. +++++++++    ..+|.|+||.|+|+||+.+
T Consensus       120 ~~~~l~~~F~~~D~d~--------~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~  191 (226)
T 2zfd_A          120 IDDKIHFSFQLYDLKQ--------QGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSL  191 (226)
T ss_dssp             HHHHHHHHHHHHCTTS--------SSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCC--------CCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence            2567999999999999        99999999999996    56777 777776655    5999999999999999999


Q ss_pred             HHcCCC
Q 048594          455 MKTGTH  460 (483)
Q Consensus       455 ~~~~~~  460 (483)
                      |.....
T Consensus       192 ~~~~~~  197 (226)
T 2zfd_A          192 VLRHPS  197 (226)
T ss_dssp             HHHSGG
T ss_pred             HHhChH
Confidence            987654

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.63  E-value=1.7e-15  Score=138.65  Aligned_cols=136  Identities=19%  Similarity=0.344  Sum_probs=112.9

Q ss_pred             ccchHHHhhHHHHHhhcCCC--CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------h
Q 048594          316 NLPAEEIQKHKETFKQMDTN--DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------Q  383 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d--~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~  383 (483)
                      .++.+++..++++|..+|.|  ++|.|+.+||..++.. .....+..++++|..+|.+++|.+....+.          .
T Consensus        30 ~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~  108 (207)
T 2ehb_A           30 PFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAP  108 (207)
T ss_dssp             SCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSC
T ss_pred             CCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCC
Confidence            57889999999999999999  9999999999999987 333445668889999999999983332211          2


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHh----hCCCC-ChHHHHHHH----HHHcCCCCCcccHHHHHHH
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFK----EYNMG-DDATIKEIM----FEVDRDKDGRISYEEFCAT  454 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~----~~~~~-~~~~~~~~~----~~~d~~~~g~i~~~ef~~~  454 (483)
                      ..+.+..+|+.||.|+        +|+|+.+||..+++    .+|.. ++++++.++    ..+|.|+||.|+|+||+.+
T Consensus       109 ~~~~l~~~F~~~D~d~--------~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~  180 (207)
T 2ehb_A          109 VHEKVKFAFKLYDLRQ--------TGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDF  180 (207)
T ss_dssp             HHHHHHHHHHHHCTTC--------CSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence            3566899999999999        99999999999996    45766 777775555    5999999999999999999


Q ss_pred             HHcCCC
Q 048594          455 MKTGTH  460 (483)
Q Consensus       455 ~~~~~~  460 (483)
                      |.....
T Consensus       181 ~~~~~~  186 (207)
T 2ehb_A          181 VSLNPS  186 (207)
T ss_dssp             HHHCGG
T ss_pred             HHhChH
Confidence            987654

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=99.63  E-value=6.3e-16  Score=138.61  Aligned_cols=132  Identities=17%  Similarity=0.199  Sum_probs=113.3

Q ss_pred             ccchHHHhhHHHHHhhcCC-----CC-C--CCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc-eeechhhh---
Q 048594          316 NLPAEEIQKHKETFKQMDT-----ND-S--GTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT-TLNLSLVQ---  383 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~-----d~-~--G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~-~~~~~~~~---  383 (483)
                      .++.+++..++++|..+|.     |+ +  |.|+.+||.. +..+|..++..   +++..+|.+++|. +....+..   
T Consensus        13 ~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~~~   88 (183)
T 1dgu_A           13 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLLS   88 (183)
T ss_dssp             SCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHHHH
Confidence            4688899999999999999     68 8  9999999999 99999888765   5777889999998 65554332   


Q ss_pred             -------chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCC-----C-ChHHHHH----HHHHHcCCCCCcc
Q 048594          384 -------CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM-----G-DDATIKE----IMFEVDRDKDGRI  446 (483)
Q Consensus       384 -------~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~-----~-~~~~~~~----~~~~~d~~~~g~i  446 (483)
                             ..+.+..+|+.||.++        +|+|+.+||+.++..+|.     . +++++..    ++..+|.|+||.|
T Consensus        89 ~~~~~~~~~~~l~~~F~~~D~d~--------~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I  160 (183)
T 1dgu_A           89 VFSDTATPDIKSHYAFRIFDFDD--------DGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTI  160 (183)
T ss_dssp             HHSTTCCHHHHHHHHHHHHCTTC--------SSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEE
T ss_pred             HhcCCCCHHHHHHHHHHHhCCCC--------CCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeE
Confidence                   1357999999999999        999999999999999876     4 6777775    8999999999999


Q ss_pred             cHHHHHHHHHcCC
Q 048594          447 SYEEFCATMKTGT  459 (483)
Q Consensus       447 ~~~ef~~~~~~~~  459 (483)
                      +|+||+.+|....
T Consensus       161 ~~~EF~~~~~~~~  173 (183)
T 1dgu_A          161 NLSEFQHVISRSP  173 (183)
T ss_dssp             EHHHHHHHHCSSC
T ss_pred             cHHHHHHHHHhCh
Confidence            9999999997653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.62  E-value=4.4e-16  Score=154.52  Aligned_cols=112  Identities=14%  Similarity=0.184  Sum_probs=89.0

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------------------
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------------------   89 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------------------   89 (483)
                      |.+...||+|++|.||+|.+. +|+.||||+++......                                         
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999999985 69999999976431100                                         


Q ss_pred             ---------cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCC-----
Q 048594           90 ---------EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDEN-----  155 (483)
Q Consensus        90 ---------~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~-----  155 (483)
                               ..+|||||++|++|.+...      ...+..++.||+.+|.+||+.|||||||||.|||+..++..     
T Consensus       176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~  249 (397)
T 4gyi_A          176 PVPEPIAQSRHTIVMSLVDALPMRQVSS------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSS  249 (397)
T ss_dssp             SCCCEEEEETTEEEEECCSCEEGGGCCC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTS
T ss_pred             CCCeeeeccCceEEEEecCCccHhhhcc------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccc
Confidence                     0069999999988866532      22456788999999999999999999999999999754321     


Q ss_pred             --CcEEEeecccceec
Q 048594          156 --ATLKATDFGLAFFF  169 (483)
Q Consensus       156 --~~ikl~Dfg~a~~~  169 (483)
                        ..+.|+||+-+...
T Consensus       250 ~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          250 ITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             EEEEEEECCCTTCEET
T ss_pred             cccceEEEEeCCcccC
Confidence              14899999987654

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.61  E-value=4.1e-15  Score=133.09  Aligned_cols=135  Identities=19%  Similarity=0.254  Sum_probs=112.7

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHhccCCCCCceeechhh---------hc
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGST-LTEVDVKQYMQAADIDGNGTTLNLSLV---------QC  384 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~-~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~  384 (483)
                      ..++.+++..+.+.|+.+  |++|.|+.+||..+++.++.. .+..++..+|..+|.+++|.+....+.         ..
T Consensus        13 ~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~   90 (183)
T 1s6c_A           13 TNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV   90 (183)
T ss_dssp             SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred             cCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCH
Confidence            356777777777777776  589999999999999999865 789999999999999999984433322         23


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC----CCC---------ChHHHHHHHHHHcCCCCCcccHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY----NMG---------DDATIKEIMFEVDRDKDGRISYEEF  451 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~----~~~---------~~~~~~~~~~~~d~~~~g~i~~~ef  451 (483)
                      .+.+..+|+.+|.++        +|+|+.+||..++..+    |..         .++++..+|..+|.|+||.|+|+||
T Consensus        91 ~~~~~~~f~~~D~d~--------~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef  162 (183)
T 1s6c_A           91 HEKLRWTFNLYDINK--------DGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF  162 (183)
T ss_dssp             HHHHHHHHHHHCTTC--------SSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHH
T ss_pred             HHHHHHHHHHhCCCC--------CCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHH
Confidence            567899999999999        9999999999999886    531         2488999999999999999999999


Q ss_pred             HHHHHcCC
Q 048594          452 CATMKTGT  459 (483)
Q Consensus       452 ~~~~~~~~  459 (483)
                      +.+|....
T Consensus       163 ~~~~~~~~  170 (183)
T 1s6c_A          163 LESXQEDD  170 (183)
T ss_dssp             HHHTTSCC
T ss_pred             HHHHhcCh
Confidence            99987653

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=99.61  E-value=1.1e-15  Score=144.85  Aligned_cols=129  Identities=19%  Similarity=0.353  Sum_probs=112.4

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhc----CCCCCHHHHHH----HHHhccCCCCCceeechhh-----------
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKL----GSTLTEVDVKQ----YMQAADIDGNGTTLNLSLV-----------  382 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~----~~~~~~~~~~~----l~~~~d~~~~g~~~~~~~~-----------  382 (483)
                      ...++++|..+|.|++|+|+.+||..++..+    |..++..++..    ++..+|.+++|.+....+.           
T Consensus       102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~  181 (263)
T 2f33_A          102 CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLL  181 (263)
T ss_dssp             HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHH
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHH
Confidence            3468899999999999999999999999998    89999988877    9999999999983322211           


Q ss_pred             ------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCC----C-ChHHHHHHHHH-HcCCCCCcccHHH
Q 048594          383 ------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM----G-DDATIKEIMFE-VDRDKDGRISYEE  450 (483)
Q Consensus       383 ------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~----~-~~~~~~~~~~~-~d~~~~g~i~~~e  450 (483)
                            ...+.+..+|+.||+++        +|+|+.+||+.+++.++.    . +++++..++.. +|.|+||.|+|+|
T Consensus       182 ~~~~~~~~~~~~~~~F~~~D~d~--------~G~is~~El~~~l~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~i~~~E  253 (263)
T 2f33_A          182 KFQGIKMCGKEFNKAFELYDQDG--------NGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTD  253 (263)
T ss_dssp             HHHHTCCCHHHHHHHHHHHCCSS--------SSCEEHHHHHHHHHHHHHHCTTTCCTTTHHHHHHHHHTTSBTTEECGGG
T ss_pred             HhcCcchHHHHHHHHHHHhCCCC--------CCcccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCeEcHHH
Confidence                  23567899999999999        999999999999998875    5 88899999987 7999999999999


Q ss_pred             HHHHHHcC
Q 048594          451 FCATMKTG  458 (483)
Q Consensus       451 f~~~~~~~  458 (483)
                      |+.+|...
T Consensus       254 F~~~~~~~  261 (263)
T 2f33_A          254 LALILSAG  261 (263)
T ss_dssp             THHHHCCS
T ss_pred             HHHHHhcc
Confidence            99999765

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.60  E-value=2e-15  Score=137.17  Aligned_cols=127  Identities=20%  Similarity=0.242  Sum_probs=107.9

Q ss_pred             hhHHHHHhhcCCC-CCCCcCHHHHHHHHHhcCCCCCH-HHHHHHHHhccCCCCCceeechhh---------hchhHHHHH
Q 048594          323 QKHKETFKQMDTN-DSGTLTYDEFKAGLSKLGSTLTE-VDVKQYMQAADIDGNGTTLNLSLV---------QCKDTSLKD  391 (483)
Q Consensus       323 ~~l~~~F~~~D~d-~~G~l~~~el~~~l~~~~~~~~~-~~~~~l~~~~d~~~~g~~~~~~~~---------~~~~~~~~~  391 (483)
                      .+++++|..+|.+ ++|.|+.+||..+++.+|..++. +++..+|..+|.+++|.+....+.         ...+.+..+
T Consensus        14 ~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~   93 (198)
T 2r2i_A           14 TECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWY   93 (198)
T ss_dssp             SCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHH
Confidence            4578899999988 89999999999999999887665 459999999999999984433322         235678999


Q ss_pred             HhhcCCCCccchhccccccccHHHHHHHHhhCC------CC-Ch-HHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          392 FNIFTKPSNILIRIMISIYITADELEAAFKEYN------MG-DD-ATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       392 F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~------~~-~~-~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      |+.||.|+        +|+|+.+||..++..++      .. +. +.+..+|..+|.|+||.|+|+||+.++..
T Consensus        94 F~~~D~d~--------~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  159 (198)
T 2r2i_A           94 FKLYDVDG--------NGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK  159 (198)
T ss_dssp             HHHHCTTC--------SSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred             HHHhcCCC--------CCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence            99999999        99999999999999885      33 44 45899999999999999999999999974

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.60  E-value=4.5e-15  Score=133.71  Aligned_cols=128  Identities=20%  Similarity=0.284  Sum_probs=108.7

Q ss_pred             hHHHHHhhcCCC-CCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHhccCCCCCceeechhh---------hchhHHHHHH
Q 048594          324 KHKETFKQMDTN-DSGTLTYDEFKAGLSKLGST-LTEVDVKQYMQAADIDGNGTTLNLSLV---------QCKDTSLKDF  392 (483)
Q Consensus       324 ~l~~~F~~~D~d-~~G~l~~~el~~~l~~~~~~-~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~~~~~~~F  392 (483)
                      +++++|..+|.| ++|.|+.+||..+++.++.. .+..++..+|..+|.+++|.+....+.         ...+.+..+|
T Consensus        26 el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f  105 (190)
T 2l2e_A           26 ELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAF  105 (190)
T ss_dssp             HHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            577889999999 89999999999999998643 567789999999999999984333222         2357889999


Q ss_pred             hhcCCCCccchhccccccccHHHHHHHHhhC----C--------CC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          393 NIFTKPSNILIRIMISIYITADELEAAFKEY----N--------MG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       393 ~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~----~--------~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      +.+|.++        +|+|+.+|+..++..+    |        .. +++++..+|..+|.|+||.|+|+||+.++....
T Consensus       106 ~~~D~d~--------~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~  177 (190)
T 2l2e_A          106 QLYDLDN--------NGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDP  177 (190)
T ss_dssp             HHHCTTS--------CSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTCT
T ss_pred             hHccCCC--------CCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCc
Confidence            9999999        9999999999999872    2        23 678899999999999999999999999997654

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.60  E-value=7.4e-15  Score=136.82  Aligned_cols=133  Identities=20%  Similarity=0.304  Sum_probs=111.4

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhc-CCCCCHHHHHHHHHhccCCCCCceeechhh---------hch
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL-GSTLTEVDVKQYMQAADIDGNGTTLNLSLV---------QCK  385 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~-~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~  385 (483)
                      .++.+++..+.+.|..  .|++|.|+.+||..++..+ +...+...++.+|+.+|.|++|.+....+.         ...
T Consensus        60 ~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~  137 (229)
T 3dd4_A           60 KFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQ  137 (229)
T ss_dssp             HHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHH
T ss_pred             CCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChH
Confidence            3567788888888877  4688999999999999996 556778889999999999999984333322         235


Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC------------CCC-ChHHHHHHHHHHcCCCCCcccHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY------------NMG-DDATIKEIMFEVDRDKDGRISYEEFC  452 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~------------~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~  452 (483)
                      +.+..+|+.||.|+        +|+|+.+||..+++.+            +.. ++++++.+|..+|.|+||.|+|+||+
T Consensus       138 ~~l~~~F~~~D~d~--------dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~  209 (229)
T 3dd4_A          138 EKLNWAFNLYDINK--------DGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFI  209 (229)
T ss_dssp             HHHHHHHHHHCTTC--------SSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHH
T ss_pred             HHHHHHHHHhCCCC--------CCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHH
Confidence            67899999999999        9999999999999986            444 67899999999999999999999999


Q ss_pred             HHHHcC
Q 048594          453 ATMKTG  458 (483)
Q Consensus       453 ~~~~~~  458 (483)
                      .++...
T Consensus       210 ~~~~~~  215 (229)
T 3dd4_A          210 ESCQKD  215 (229)
T ss_dssp             HHHHTC
T ss_pred             HHHHhC
Confidence            999754

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=99.59  E-value=1.2e-15  Score=144.77  Aligned_cols=134  Identities=17%  Similarity=0.287  Sum_probs=115.6

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCH------HHHHHHHHhccCCCCCceeech---------
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTE------VDVKQYMQAADIDGNGTTLNLS---------  380 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~------~~~~~l~~~~d~~~~g~~~~~~---------  380 (483)
                      .+++.+..+++++|..+|.|++|.|+.+||..+++.+|..++.      .++..++..+|.+++|.+....         
T Consensus         9 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~   88 (263)
T 2f33_A            9 QSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEE   88 (263)
T ss_dssp             TTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCT
T ss_pred             hcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhh
Confidence            4566777889999999999999999999999999999876665      7899999999999999832222         


Q ss_pred             ---------hhhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC----CCC-ChHHHHH----HHHHHcCCC
Q 048594          381 ---------LVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY----NMG-DDATIKE----IMFEVDRDK  442 (483)
Q Consensus       381 ---------~~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~----~~~-~~~~~~~----~~~~~d~~~  442 (483)
                               .....+.+..+|+.||+++        +|+|+.+||..+++.+    |.. +++++..    ++..+|.|+
T Consensus        89 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~--------~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~  160 (263)
T 2f33_A           89 NFLLLFRCQQLKSCEEFMKTWRKYDTDH--------SGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNN  160 (263)
T ss_dssp             THHHHHGGGTSSCHHHHHHHHTTSSTTT--------CSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSS
T ss_pred             hHHHHHHHhhccHHHHHHHHHHHHCCCC--------CCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCC
Confidence                     1234567899999999999        9999999999999988    777 7887777    999999999


Q ss_pred             CCcccHHHHHHHHHc
Q 048594          443 DGRISYEEFCATMKT  457 (483)
Q Consensus       443 ~g~i~~~ef~~~~~~  457 (483)
                      +|.|+|+||+.++..
T Consensus       161 dg~i~~~ef~~~~~~  175 (263)
T 2f33_A          161 DGKLELTEMARLLPV  175 (263)
T ss_dssp             SSCBCHHHHHHHSCT
T ss_pred             CCeEcHHHHHHHHHH
Confidence            999999999998864

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=99.59  E-value=9.2e-16  Score=141.46  Aligned_cols=132  Identities=17%  Similarity=0.199  Sum_probs=112.4

Q ss_pred             hccchHHHhhHHHHHhhcCC-----CC-C--CCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc-eeechhhh--
Q 048594          315 ENLPAEEIQKHKETFKQMDT-----ND-S--GTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT-TLNLSLVQ--  383 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~-----d~-~--G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~-~~~~~~~~--  383 (483)
                      ..++.+++..+.+.|+.+|+     |+ +  |.|+.+||.. +..+|.+++.+   ++++.+|.+++|. +....++.  
T Consensus        43 t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~~---~lf~~~D~d~dG~~I~f~EF~~~~  118 (214)
T 2l4h_A           43 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLL  118 (214)
T ss_dssp             CSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTHH---HHHHHHCCSSSCCSEEHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHHH---HHHHHhCcCCCCCEecHHHHHHHH
Confidence            35789999999999999998     66 6  9999999999 88898887754   6788899999998 66654432  


Q ss_pred             --------chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCC-----C-ChHHHHH----HHHHHcCCCCCc
Q 048594          384 --------CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM-----G-DDATIKE----IMFEVDRDKDGR  445 (483)
Q Consensus       384 --------~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~-----~-~~~~~~~----~~~~~d~~~~g~  445 (483)
                              ..+.++.+|+.||.|+        +|+|+.+||..++..++.     . ++++++.    +|..+|.|+||.
T Consensus       119 ~~~~~~~~~~~~l~~~F~~~D~d~--------dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~  190 (214)
T 2l4h_A          119 SVFSDTATPDIKSHYAFRIFDFDD--------DGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT  190 (214)
T ss_dssp             HHTSSCSCHHHHHHHHHHHHCTTC--------SSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSS
T ss_pred             HHHcCCCCHHHHHHHHHHHhCCCC--------CCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCc
Confidence                    2458999999999999        999999999999998854     4 6666665    899999999999


Q ss_pred             ccHHHHHHHHHcC
Q 048594          446 ISYEEFCATMKTG  458 (483)
Q Consensus       446 i~~~ef~~~~~~~  458 (483)
                      |+|+||+.++...
T Consensus       191 Is~~EF~~~~~~~  203 (214)
T 2l4h_A          191 INLSEFQHVISRS  203 (214)
T ss_dssp             BCSHHHHHHHHTC
T ss_pred             CCHHHHHHHHHhC
Confidence            9999999999764

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.58  E-value=1.6e-15  Score=139.42  Aligned_cols=129  Identities=20%  Similarity=0.272  Sum_probs=105.6

Q ss_pred             hhHHHHHhhcCCC-CCCCcCHHHHHHHHHhcCCCCCH-HHHHHHHHhccCCCCCceeechhh---------hchhHHHHH
Q 048594          323 QKHKETFKQMDTN-DSGTLTYDEFKAGLSKLGSTLTE-VDVKQYMQAADIDGNGTTLNLSLV---------QCKDTSLKD  391 (483)
Q Consensus       323 ~~l~~~F~~~D~d-~~G~l~~~el~~~l~~~~~~~~~-~~~~~l~~~~d~~~~g~~~~~~~~---------~~~~~~~~~  391 (483)
                      .+++++|+.+|.+ ++|+|+.+||..+++.++..++. ++++.+|+.+|.+++|.+....+.         ...+.+..+
T Consensus        19 ~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~   98 (211)
T 2ggz_A           19 QETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWY   98 (211)
T ss_dssp             -----CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHH
Confidence            3568899999988 89999999999999999877654 559999999999999984433322         235678999


Q ss_pred             HhhcCCCCccchhccccccccHHHHHHHHhhCC-----CC-Ch-HHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          392 FNIFTKPSNILIRIMISIYITADELEAAFKEYN-----MG-DD-ATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       392 F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~-----~~-~~-~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      |+.||.|+        +|+|+.+||..++..++     .. +. +.+..+|..+|.|+||.|+|+||+.++....
T Consensus        99 F~~~D~d~--------~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~  165 (211)
T 2ggz_A           99 FKLYDADG--------NGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQ  165 (211)
T ss_dssp             HHHHCTTC--------SSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTTT
T ss_pred             HHHhcCCC--------CCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhCH
Confidence            99999999        99999999999999875     44 44 5589999999999999999999999998654

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=99.58  E-value=3.5e-15  Score=142.23  Aligned_cols=130  Identities=17%  Similarity=0.239  Sum_probs=110.9

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhc----CCCCCHHHHHH----HHHhccCCCCCceeechhh-----------
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKL----GSTLTEVDVKQ----YMQAADIDGNGTTLNLSLV-----------  382 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~----~~~~~~~~~~~----l~~~~d~~~~g~~~~~~~~-----------  382 (483)
                      ...++.+|..+|.|++|.|+.+||..++..+    |..++..++..    +|..+|.+++|.+....+.           
T Consensus       103 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~  182 (272)
T 2be4_A          103 SVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLL  182 (272)
T ss_dssp             HHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSST
T ss_pred             HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHh
Confidence            3468899999999999999999999999998    88899888754    9999999999983332211           


Q ss_pred             ----------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCC----C-ChHHHHH----HHHHHcCCCC
Q 048594          383 ----------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM----G-DDATIKE----IMFEVDRDKD  443 (483)
Q Consensus       383 ----------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~----~-~~~~~~~----~~~~~d~~~~  443 (483)
                                ...+.+..+|+.||+|+        +|+|+.+||.++++.++.    . ++++++.    ++..+|.|+|
T Consensus       183 ~~~~~~~~~~~~~~~~~~~F~~~D~d~--------~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~d  254 (272)
T 2be4_A          183 QFKMDASSQVERKRDFEKIFAHYDVSR--------TGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKD  254 (272)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHCTTC--------CSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTT
T ss_pred             hhhhhhccccccHHHHHHHHHHhCCCC--------CCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence                      23467899999999999        999999999999998765    5 7888777    9999999999


Q ss_pred             CcccHHHHHHHHHcCC
Q 048594          444 GRISYEEFCATMKTGT  459 (483)
Q Consensus       444 g~i~~~ef~~~~~~~~  459 (483)
                      |.|+|+||+.+|....
T Consensus       255 G~is~~EF~~~~~~~p  270 (272)
T 2be4_A          255 GKIQKSELALCLGLKH  270 (272)
T ss_dssp             CEEEHHHHHHHTTCCC
T ss_pred             CcCcHHHHHHHHccCC
Confidence            9999999999987543

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.58  E-value=4.8e-15  Score=135.54  Aligned_cols=128  Identities=12%  Similarity=0.133  Sum_probs=107.8

Q ss_pred             hHHHHHhhcCCC-CCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHhccCCCCCceeechhh---------hchhHHHHHH
Q 048594          324 KHKETFKQMDTN-DSGTLTYDEFKAGLSKLGST-LTEVDVKQYMQAADIDGNGTTLNLSLV---------QCKDTSLKDF  392 (483)
Q Consensus       324 ~l~~~F~~~D~d-~~G~l~~~el~~~l~~~~~~-~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~~~~~~~F  392 (483)
                      +++++|..+|.+ ++|.|+.+||..++..++.. .+..++..+|..+|.+++|.+....+.         ...+.+..+|
T Consensus        34 ~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f  113 (207)
T 2d8n_A           34 ELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAF  113 (207)
T ss_dssp             HHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHHH
T ss_pred             HHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            566677777777 79999999999999999765 788899999999999999984333222         2356789999


Q ss_pred             hhcCCCCccchhccccccccHHHHHHHHhhC----C----CC-C------hHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          393 NIFTKPSNILIRIMISIYITADELEAAFKEY----N----MG-D------DATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       393 ~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~----~----~~-~------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +.||.++        +|+|+.+||..++..+    |    .. +      ++++..+|..+|.|+||.|+|+||+.+|..
T Consensus       114 ~~~D~d~--------~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  185 (207)
T 2d8n_A          114 SLYDVDG--------NGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLA  185 (207)
T ss_dssp             HHHCTTC--------SSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHH
T ss_pred             HHhcCCC--------CCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHh
Confidence            9999999        9999999999999886    6    33 2      367999999999999999999999999986


Q ss_pred             CC
Q 048594          458 GT  459 (483)
Q Consensus       458 ~~  459 (483)
                      ..
T Consensus       186 ~~  187 (207)
T 2d8n_A          186 NK  187 (207)
T ss_dssp             CH
T ss_pred             Ch
Confidence            43

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=99.58  E-value=1.9e-15  Score=148.12  Aligned_cols=129  Identities=18%  Similarity=0.200  Sum_probs=114.6

Q ss_pred             HHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHH-HHHhccCCCCCceeechhhhc---hhHHHHHHhhc
Q 048594          320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQ-YMQAADIDGNGTTLNLSLVQC---KDTSLKDFNIF  395 (483)
Q Consensus       320 ~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~-l~~~~d~~~~g~~~~~~~~~~---~~~~~~~F~~~  395 (483)
                      .....+..+|..+|.|++|+|+.+||..++  +|..++..++.. ++..+|.+++|.+....+...   ...+..+|+.|
T Consensus       185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~l~~~F~~~  262 (323)
T 1ij5_A          185 NDLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFA  262 (323)
T ss_dssp             HHHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHHHHHHHHHHh
Confidence            455678899999999999999999999999  888899999999 999999999998555444322   23688999999


Q ss_pred             CCCCccchhccccccccHHHHHHHH-hhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          396 TKPSNILIRIMISIYITADELEAAF-KEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       396 d~~~~~~~~~~~~g~i~~~el~~~~-~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      |.++        +|+|+.+||..++ ..+|.. +++++..+|..+|.|+||.|+|+||+.+|...
T Consensus       263 D~d~--------dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~~  319 (323)
T 1ij5_A          263 DFDK--------SGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLM  319 (323)
T ss_dssp             CSSS--------CSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHHH
T ss_pred             CCCC--------CCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence            9999        9999999999999 999987 88899999999999999999999999998754

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.58  E-value=1.8e-14  Score=133.72  Aligned_cols=134  Identities=19%  Similarity=0.256  Sum_probs=111.4

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHhccCCCCCceeechhh---------hch
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGST-LTEVDVKQYMQAADIDGNGTTLNLSLV---------QCK  385 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~-~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~  385 (483)
                      .++.+++..+.+.|+..  |++|.|+.+||..+++.++.. .+..+++.+|+.+|.|++|.+....+.         ...
T Consensus        47 ~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~  124 (224)
T 1s1e_A           47 NFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVH  124 (224)
T ss_dssp             SCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHH
T ss_pred             CCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHH
Confidence            46777777777777665  489999999999999999754 789999999999999999984333222         235


Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC----CCC---------ChHHHHHHHHHHcCCCCCcccHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY----NMG---------DDATIKEIMFEVDRDKDGRISYEEFC  452 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~----~~~---------~~~~~~~~~~~~d~~~~g~i~~~ef~  452 (483)
                      +.+..+|+.||.|+        +|+|+.+||..++..+    |..         .++++.++|..+|.|+||.|+|+||+
T Consensus       125 ~~l~~~F~~~D~d~--------dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~  196 (224)
T 1s1e_A          125 EKLRWTFNLYDINK--------DGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFL  196 (224)
T ss_dssp             HHHHHHHHHHCTTC--------CSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHHHHHHHHHcCCC--------CCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            67899999999999        9999999999999876    531         24789999999999999999999999


Q ss_pred             HHHHcCC
Q 048594          453 ATMKTGT  459 (483)
Q Consensus       453 ~~~~~~~  459 (483)
                      .+|....
T Consensus       197 ~~~~~~~  203 (224)
T 1s1e_A          197 ESCQEDD  203 (224)
T ss_dssp             HHHHTCH
T ss_pred             HHHHhCH
Confidence            9997653

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.56  E-value=8.2e-15  Score=131.90  Aligned_cols=128  Identities=15%  Similarity=0.209  Sum_probs=105.2

Q ss_pred             hHHHHHhhcCCC-CCCCcCHHHHHHHHHhc-CCCCCHHHHHHHHHhccCCCCCceeechhh---------hchhHHHHHH
Q 048594          324 KHKETFKQMDTN-DSGTLTYDEFKAGLSKL-GSTLTEVDVKQYMQAADIDGNGTTLNLSLV---------QCKDTSLKDF  392 (483)
Q Consensus       324 ~l~~~F~~~D~d-~~G~l~~~el~~~l~~~-~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~~~~~~~F  392 (483)
                      +++++|..+|.+ ++|.|+.+||..+++.+ +...+..++..+|..+|.+++|.+....+.         ...+.+..+|
T Consensus        26 ~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f  105 (190)
T 1g8i_A           26 EVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAF  105 (190)
T ss_dssp             HHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCHHHHHHHHH
Confidence            456667777766 89999999999999998 334567789999999999999984333322         2356789999


Q ss_pred             hhcCCCCccchhccccccccHHHHHHHHhhC----C--------CC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          393 NIFTKPSNILIRIMISIYITADELEAAFKEY----N--------MG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       393 ~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~----~--------~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      +.+|.++        +|+|+.+||..++..+    |        .. +++++..+|..+|.|+||.|+|+||+.++....
T Consensus       106 ~~~D~d~--------~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~~  177 (190)
T 1g8i_A          106 KLYDLDN--------DGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADP  177 (190)
T ss_dssp             HHHCTTC--------SSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCH
T ss_pred             HhhcCCC--------CCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhCh
Confidence            9999999        9999999999999882    3        23 578899999999999999999999999997653

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=99.54  E-value=4.7e-15  Score=141.26  Aligned_cols=134  Identities=22%  Similarity=0.320  Sum_probs=112.8

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHH----hcCC--CCCHHHHHHH----HHhccCCCCCceeechh----
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLS----KLGS--TLTEVDVKQY----MQAADIDGNGTTLNLSL----  381 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~----~~~~--~~~~~~~~~l----~~~~d~~~~g~~~~~~~----  381 (483)
                      .++..+..+++++|..+|.|++|+|+.+||..+++    .+|.  .++..++..+    |..+|.+++|.+....+    
T Consensus         4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~   83 (272)
T 2be4_A            4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMI   83 (272)
T ss_dssp             CCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHH
T ss_pred             HHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence            34555667899999999999999999999999999    8898  8999888765    47889999998333221    


Q ss_pred             ----------------hhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC----CCC-ChHHHHH----HHH
Q 048594          382 ----------------VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY----NMG-DDATIKE----IMF  436 (483)
Q Consensus       382 ----------------~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~----~~~-~~~~~~~----~~~  436 (483)
                                      ....+.+..+|+.||.++        +|+|+.+||..+++.+    |.. +++++..    ++.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~--------~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~  155 (272)
T 2be4_A           84 LPQEENFLLIFRREAPLDNSVEFMKIWRKYDADS--------SGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMK  155 (272)
T ss_dssp             SCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTC--------CSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCC--------CCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence                            123467899999999999        9999999999999988    776 7777654    899


Q ss_pred             HHcCCCCCcccHHHHHHHHHc
Q 048594          437 EVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       437 ~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+|.|++|.|+|+||+.++..
T Consensus       156 ~~D~~~dg~i~~~ef~~~~~~  176 (272)
T 2be4_A          156 IFDKNKDGRLDLNDLARILAL  176 (272)
T ss_dssp             HHCSSCSSEEEHHHHGGGSCC
T ss_pred             HhccCCCCcCcHHHHHHHHhh
Confidence            999999999999999998865

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=99.54  E-value=1.8e-14  Score=155.65  Aligned_cols=131  Identities=15%  Similarity=0.147  Sum_probs=118.0

Q ss_pred             cchHH-HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhc--------CCCCCHHHHHHHHHhccCCCCCceeechhhh---c
Q 048594          317 LPAEE-IQKHKETFKQMDTNDSGTLTYDEFKAGLSKL--------GSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ---C  384 (483)
Q Consensus       317 ~~~~~-~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~--------~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~  384 (483)
                      +++++ ...++++|+.+| |++|.|+.+||..+|+.+        +..++.++++.++..+|.|++|.+...++..   .
T Consensus       525 ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~  603 (714)
T 3bow_A          525 ANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK  603 (714)
T ss_dssp             CSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHH
T ss_pred             CChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            56677 889999999999 999999999999999997        7889999999999999999999854444332   2


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+.++.+|+.||+|+        +|+|+.+||+.+|+.+|.. ++++++.++..+| |+||.|+|+||+.+|..
T Consensus       604 ~~~l~~~F~~~D~d~--------dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~  668 (714)
T 3bow_A          604 IQKYQKIYREIDVDR--------SGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR  668 (714)
T ss_dssp             HHHHHHHHHHHCTTC--------CSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCC--------CCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence            467899999999999        9999999999999999987 8999999999999 99999999999998864

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.53  E-value=2.3e-14  Score=129.30  Aligned_cols=130  Identities=20%  Similarity=0.310  Sum_probs=105.9

Q ss_pred             cchHHHhhHHHHHhhcCCC-CCCCcCHHHHHHHHHhcCCCC-CHHHHHHHHHhccCCCCCceeechhh---------hch
Q 048594          317 LPAEEIQKHKETFKQMDTN-DSGTLTYDEFKAGLSKLGSTL-TEVDVKQYMQAADIDGNGTTLNLSLV---------QCK  385 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d-~~G~l~~~el~~~l~~~~~~~-~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~  385 (483)
                      ++.+   +++++|..+|.+ ++|.|+.+||..+++.++... +...+..+|..+|.+++|.+....+.         ...
T Consensus        22 ~~~~---~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~   98 (193)
T 1bjf_A           22 FTEH---EIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLE   98 (193)
T ss_dssp             CCHH---HHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHH
T ss_pred             CCHH---HHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHH
Confidence            4444   456678888887 899999999999999997654 46779999999999999984333322         235


Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC----C--CC-C------hHHHHHHHHHHcCCCCCcccHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY----N--MG-D------DATIKEIMFEVDRDKDGRISYEEFC  452 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~----~--~~-~------~~~~~~~~~~~d~~~~g~i~~~ef~  452 (483)
                      +.+..+|+.+|.++        +|+|+.+||..++..+    |  .. +      ++.+..+|..+|.|+||.|+|+||+
T Consensus        99 ~~~~~~f~~~D~d~--------~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~  170 (193)
T 1bjf_A           99 QKLKWAFSMYDLDG--------NGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFI  170 (193)
T ss_dssp             HHHHHHHHHHCTTC--------SSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHH
T ss_pred             HHHHHHHhhcCCCC--------CCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHH
Confidence            67899999999999        9999999999999763    5  11 2      2458999999999999999999999


Q ss_pred             HHHHc
Q 048594          453 ATMKT  457 (483)
Q Consensus       453 ~~~~~  457 (483)
                      .++..
T Consensus       171 ~~~~~  175 (193)
T 1bjf_A          171 RGAKS  175 (193)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            99964

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.52  E-value=5.8e-14  Score=126.30  Aligned_cols=134  Identities=21%  Similarity=0.256  Sum_probs=106.9

Q ss_pred             ccchHHHhhHHHHHhhcCCC-CCCCcCHHHHHHHHHhcCC-CCCHHHHHHHHHhccCCCCCceeechhh---------hc
Q 048594          316 NLPAEEIQKHKETFKQMDTN-DSGTLTYDEFKAGLSKLGS-TLTEVDVKQYMQAADIDGNGTTLNLSLV---------QC  384 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d-~~G~l~~~el~~~l~~~~~-~~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~  384 (483)
                      .++.+++..   +|..||.+ ++|.|+.+||..+++.++. ..+.+++..+|..+|.+++|.+....+.         ..
T Consensus        21 ~~~~~~i~~---~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~   97 (190)
T 1fpw_A           21 YFDRREIQQ---WHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTL   97 (190)
T ss_dssp             CSTHHHHHH---HHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCS
T ss_pred             CCCHHHHHH---HHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCc
Confidence            355565544   55555554 8999999999999999853 3556779999999999999983332221         23


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhh----CCC--------C-ChHHHHHHHHHHcCCCCCcccHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE----YNM--------G-DDATIKEIMFEVDRDKDGRISYEEF  451 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~----~~~--------~-~~~~~~~~~~~~d~~~~g~i~~~ef  451 (483)
                      .+.+..+|+.+|.++        +|+|+.+|+..++..    +|.        . +++++..+|..+|.|+||.|+|+||
T Consensus        98 ~~~~~~~f~~~D~d~--------~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef  169 (190)
T 1fpw_A           98 EEKLSWAFELYDLNH--------DGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF  169 (190)
T ss_dssp             THHHHHHHHHHCSSC--------SSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHH
T ss_pred             HHHHHHHHHHhcCCC--------CCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence            567899999999999        999999999999987    342        2 5678999999999999999999999


Q ss_pred             HHHHHcCCC
Q 048594          452 CATMKTGTH  460 (483)
Q Consensus       452 ~~~~~~~~~  460 (483)
                      +.++.....
T Consensus       170 ~~~~~~~~~  178 (190)
T 1fpw_A          170 REGSKVDPS  178 (190)
T ss_dssp             HHHHHSSTT
T ss_pred             HHHHHhChH
Confidence            999987643

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.52  E-value=4.2e-14  Score=134.01  Aligned_cols=135  Identities=22%  Similarity=0.287  Sum_probs=111.3

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcC-CCCCHHHHHHHHHhccCCCCCceeechhh---------hch
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG-STLTEVDVKQYMQAADIDGNGTTLNLSLV---------QCK  385 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~-~~~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~  385 (483)
                      .++.+++..+.+.|+..  +++|.|+.+||..++..++ ...+..++..+|..+|.|++|.+....+.         ...
T Consensus        87 ~~s~~ei~~l~~~fd~~--~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~  164 (256)
T 2jul_A           87 KFTKKELQSLYRGFKNE--CPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVH  164 (256)
T ss_dssp             TSCHHHHHHHHHHHHHH--CTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHH
T ss_pred             CCCHHHHHHHHHHHHhh--CCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChH
Confidence            46777777666666643  4799999999999999985 56788899999999999999984333222         235


Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC----C--------CC-ChHHHHHHHHHHcCCCCCcccHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY----N--------MG-DDATIKEIMFEVDRDKDGRISYEEFC  452 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~----~--------~~-~~~~~~~~~~~~d~~~~g~i~~~ef~  452 (483)
                      +.+..+|+.||.++        +|+|+.+||..++..+    |        .. .+++++.+|..+|.|+||.|+|+||+
T Consensus       165 ~~l~~~F~~~D~d~--------dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~  236 (256)
T 2jul_A          165 EKLKWAFNLYDINK--------DGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFL  236 (256)
T ss_dssp             HHHHHHHHHTCCSS--------SSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHH
T ss_pred             HHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHH
Confidence            67899999999999        9999999999999876    5        22 56889999999999999999999999


Q ss_pred             HHHHcCCC
Q 048594          453 ATMKTGTH  460 (483)
Q Consensus       453 ~~~~~~~~  460 (483)
                      .++.....
T Consensus       237 ~~~~~~~~  244 (256)
T 2jul_A          237 ETCQKDEN  244 (256)
T ss_dssp             HHHHHCSS
T ss_pred             HHHHhCHH
Confidence            99986543

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=99.51  E-value=1.3e-14  Score=153.53  Aligned_cols=145  Identities=10%  Similarity=0.142  Sum_probs=70.2

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh------hchhHHHHHHhhcCC
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV------QCKDTSLKDFNIFTK  397 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~------~~~~~~~~~F~~~d~  397 (483)
                      .++++|..+|.|++|+|+.+||..+|+.+|.++++++++.+|+.+|.+++|.+...++.      ...+++..+|+.||+
T Consensus        12 ~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~~~el~~aF~~fD~   91 (624)
T 1djx_A           12 WIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQRAEIDRAFEEAAG   91 (624)
T ss_dssp             --------------------------------------------------------CTTHHHHHHTCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhccHHHHHHHHHHhcC
Confidence            58899999999999999999999999999999999999999999999999984443322      235779999999997


Q ss_pred             CCccchhccccccccHHHHHHHHhhC-CCC--ChHHHHHHHHHHcCC----CCCcccHHHHHHHHHcCCCCC--------
Q 048594          398 PSNILIRIMISIYITADELEAAFKEY-NMG--DDATIKEIMFEVDRD----KDGRISYEEFCATMKTGTHLR--------  462 (483)
Q Consensus       398 ~~~~~~~~~~~g~i~~~el~~~~~~~-~~~--~~~~~~~~~~~~d~~----~~g~i~~~ef~~~~~~~~~~~--------  462 (483)
                       +        +|+|+.+||+++|... |..  +++++++|+.++|.|    ++|.|+|+||+.+|....+.-        
T Consensus        92 -~--------~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~~~~~~~p~~~~v  162 (624)
T 1djx_A           92 -S--------AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSADGNAFSLAHRRV  162 (624)
T ss_dssp             -T--------SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHSTTTBSBCGGGGSC
T ss_pred             -C--------CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCccccccCcccccc
Confidence             5        6999999999999975 543  789999999999998    799999999999998754221        


Q ss_pred             -ccccccccchhccCC
Q 048594          463 -GTSYRNLSHIFIGKG  477 (483)
Q Consensus       463 -~~~~~~~~~~~~~~~  477 (483)
                       +.-.+-|+|-||.++
T Consensus       163 ~~dm~~pLs~Yfi~Ss  178 (624)
T 1djx_A          163 YQDMDQPLSHYLVSSS  178 (624)
T ss_dssp             CSCTTSCGGGEEECEE
T ss_pred             cccccCcchhheeecc
Confidence             223446888888765

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.44  E-value=1.4e-13  Score=117.09  Aligned_cols=100  Identities=19%  Similarity=0.279  Sum_probs=66.2

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccchh
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIR  404 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~~~  404 (483)
                      .+++|..+|.|++|.|+.+||..++....   ..                       ....+.++.+|+.||+++     
T Consensus         5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~---~~-----------------------~~~~~~l~~~F~~~D~d~-----   53 (135)
T 3h4s_E            5 EKSMLLETTSTTKMETKYEDMLPVMAEKM---DV-----------------------EEFVSELCKGFSLLADPE-----   53 (135)
T ss_dssp             --------------CCCC--------------CH-----------------------HHHHHHHHHHHHHHSBTT-----
T ss_pred             HHHHHHHHcCCCCCcEeHHHHHHHHHHHc---cc-----------------------cchHHHHHHHHHHHCCCC-----
Confidence            46789999999999999999988776421   11                       112457889999999999     


Q ss_pred             ccccccccHHHHHHHHhhCCC-C-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          405 IMISIYITADELEAAFKEYNM-G-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       405 ~~~~g~i~~~el~~~~~~~~~-~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                         +|+|+.+||+.+++.+|. . ++++++.++..+|.|+||.|+|+||+.+|...
T Consensus        54 ---~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~  106 (135)
T 3h4s_E           54 ---RHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRL  106 (135)
T ss_dssp             ---TTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred             ---CCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Confidence               999999999999999995 6 99999999999999999999999999999754

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.43  E-value=4.9e-13  Score=108.77  Aligned_cols=95  Identities=24%  Similarity=0.366  Sum_probs=79.4

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccc
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNIL  402 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~  402 (483)
                      .++.++|..+|  ++|.|+.+||..++...                             ....+.++.+|+.||+++   
T Consensus         9 ~e~~~l~~~~d--~~g~i~~~eF~~~~~~~-----------------------------~~~~~~l~~~F~~~D~d~---   54 (108)
T 2pvb_A            9 ADVAAALAACS--AADSFKHKEFFAKVGLA-----------------------------SKSLDDVKKAFYVIDQDK---   54 (108)
T ss_dssp             HHHHHHHHHTC--STTCCCHHHHHHHHTGG-----------------------------GSCHHHHHHHHHHHCTTC---
T ss_pred             HHHHHHHHHhC--CCCcCcHHHHHHHHhCC-----------------------------hhHHHHHHHHHHHHCCCC---
Confidence            35666777777  67788888887665320                             013467899999999999   


Q ss_pred             hhccccccccHHHHHHHHhhC---CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          403 IRIMISIYITADELEAAFKEY---NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       403 ~~~~~~g~i~~~el~~~~~~~---~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                           +|+|+.+||..+++.+   |.. +++++..++..+|.|++|.|+|+||+.+|+
T Consensus        55 -----~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           55 -----SGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             -----SSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             -----CCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence                 9999999999999999   776 899999999999999999999999999886

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.43  E-value=3.8e-13  Score=109.62  Aligned_cols=95  Identities=23%  Similarity=0.359  Sum_probs=81.9

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccc
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNIL  402 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~  402 (483)
                      .++.++|..+|  ++|.|+.+||..++....                             ...+.+..+|+.||+++   
T Consensus        10 ~ei~~~~~~~D--~~g~i~~~eF~~~~~~~~-----------------------------~~~~~l~~~F~~~D~d~---   55 (109)
T 3fs7_A           10 KDIESALSSCQ--AADSFNYKSFFSTVGLSS-----------------------------KTPDQIKKVFGILDQDK---   55 (109)
T ss_dssp             HHHHHHHHHTC--STTCCCHHHHHHHHTCTT-----------------------------CCHHHHHHHHHHHSTTC---
T ss_pred             HHHHHHHHhcC--CCCcCcHHHHHHHHhcCC-----------------------------CcHHHHHHHHHHHCCCC---
Confidence            45677788888  789999999987765310                             13467889999999999   


Q ss_pred             hhccccccccHHHHHHHHhhC---CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          403 IRIMISIYITADELEAAFKEY---NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       403 ~~~~~~g~i~~~el~~~~~~~---~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                           +|+|+.+||+.+++.+   |.. ++++++.++..+|.|+||.|+|+||+.+|+
T Consensus        56 -----~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           56 -----SGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             -----SSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             -----CCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence                 9999999999999999   777 899999999999999999999999999985

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.42  E-value=5.4e-13  Score=108.66  Aligned_cols=94  Identities=24%  Similarity=0.368  Sum_probs=78.1

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccch
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILI  403 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~~  403 (483)
                      ++.++|..+|  ++|.|+.+||..++...                             ....+.++.+|+.||+++    
T Consensus        11 e~~~~~~~~d--~~g~i~~~eF~~~~~~~-----------------------------~~~~~~l~~~F~~~D~d~----   55 (109)
T 1bu3_A           11 DVAAALKACE--AADSFNYKAFFAKVGLT-----------------------------AKSADDIKKAFFVIDQDK----   55 (109)
T ss_dssp             HHHHHHHHTC--STTCCCHHHHHHHHTGG-----------------------------GSCHHHHHHHHHHHCTTC----
T ss_pred             HHHHHHHHhC--CCCcCcHHHHHHHHHcC-----------------------------hhhHHHHHHHHHHHCCCC----
Confidence            4566666676  67777777777665310                             113467899999999999    


Q ss_pred             hccccccccHHHHHHHHhhC---CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          404 RIMISIYITADELEAAFKEY---NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       404 ~~~~~g~i~~~el~~~~~~~---~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                          +|+|+.+||+++++.+   |.. +++++..++..+|.|+||.|+|+||+.+|+
T Consensus        56 ----~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           56 ----SGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             ----SSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             ----CCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence                9999999999999999   776 899999999999999999999999999885

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=99.40  E-value=4.6e-13  Score=148.52  Aligned_cols=131  Identities=18%  Similarity=0.383  Sum_probs=115.1

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhh----------
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ----------  383 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~----------  383 (483)
                      ...++.+++..++++|..+|.|++|+|+.+||..+++.+|..+++.+++.+|..+|.|++|.+....+..          
T Consensus       716 ~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~  795 (863)
T 1sjj_A          716 AKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTD  795 (863)
T ss_dssp             CCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCS
T ss_pred             ccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCC
Confidence            3456778889999999999999999999999999999999999999999999999999999854443321          


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCC-----CCCcccHHHHHHHHHcC
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRD-----KDGRISYEEFCATMKTG  458 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~-----~~g~i~~~ef~~~~~~~  458 (483)
                      ..+.+..+|+.| .++        +|+|+.+||+++|.      +++++.++..+|.+     +||.|+|+||+.+|...
T Consensus       796 ~~~~l~~aF~~~-~d~--------~G~Is~~El~~~l~------~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~~  860 (863)
T 1sjj_A          796 TADQVMASFKIL-AGD--------KNYITVDELRRELP------PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGE  860 (863)
T ss_dssp             SSHHHHHHHHGG-GTS--------SSEEEHHHHHHHSC------HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSCC
T ss_pred             CHHHHHHHHHHH-hCC--------CCcCcHHHHHHHCC------HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhcC
Confidence            246789999999 899        99999999999983      78899999999987     69999999999999765


Q ss_pred             C
Q 048594          459 T  459 (483)
Q Consensus       459 ~  459 (483)
                      +
T Consensus       861 ~  861 (863)
T 1sjj_A          861 S  861 (863)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.39  E-value=5.6e-13  Score=108.75  Aligned_cols=96  Identities=22%  Similarity=0.358  Sum_probs=81.4

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccc
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNIL  402 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~  402 (483)
                      .+++++|..+|  ++|.|+.+||..++..     +                        ....+.++.+|+.||+++   
T Consensus        10 ~e~~~~~~~~d--~~g~i~~~ef~~~~~~-----~------------------------~~~~~~l~~~F~~~D~d~---   55 (110)
T 1pva_A           10 DDIKKALDAVK--AEGSFNHKKFFALVGL-----K------------------------AMSANDVKKVFKAIDADA---   55 (110)
T ss_dssp             HHHHHHHHHTC--STTCCCHHHHHHHHTC-----T------------------------TSCHHHHHHHHHHHCTTC---
T ss_pred             HHHHHHHHhcC--CCCcCcHHHHHHHHcc-----C------------------------cchHHHHHHHHHHhCCCC---
Confidence            35677777787  7888999888877631     0                        012467889999999999   


Q ss_pred             hhccccccccHHHHHHHHhhC---CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          403 IRIMISIYITADELEAAFKEY---NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       403 ~~~~~~g~i~~~el~~~~~~~---~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                           +|+|+.+||+.+++.+   |.. +++++..++..+|.|++|.|+|+||+.+|+.
T Consensus        56 -----~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  109 (110)
T 1pva_A           56 -----SGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE  109 (110)
T ss_dssp             -----SSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             -----CCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence                 9999999999999999   676 8999999999999999999999999999864

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.39  E-value=8.8e-13  Score=107.40  Aligned_cols=96  Identities=23%  Similarity=0.412  Sum_probs=82.0

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccc
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNIL  402 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~  402 (483)
                      .+++++|+.+|.  +|.|+.+||..++....                             ...+.+..+|+.||+++   
T Consensus         9 ~ei~~~~~~~d~--~g~i~~~eF~~~~~~~~-----------------------------~~~~~l~~~F~~~D~d~---   54 (109)
T 5pal_A            9 DDINKAISAFKD--PGTFDYKRFFHLVGLKG-----------------------------KTDAQVKEVFEILDKDQ---   54 (109)
T ss_dssp             HHHHHHHHHTCS--TTCCCHHHHHHHHTCTT-----------------------------CCHHHHHHHHHHHCTTC---
T ss_pred             HHHHHHHHHhCC--CCcCcHHHHHHHHhhcc-----------------------------CcHHHHHHHHHHHCCCC---
Confidence            356778888886  88999999887765210                             12467889999999999   


Q ss_pred             hhccccccccHHHHHHHHhhC---CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          403 IRIMISIYITADELEAAFKEY---NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       403 ~~~~~~g~i~~~el~~~~~~~---~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                           +|+|+.+||+.+++.+   |.. ++++++.++..+|.|+||.|+|+||+.+|+.
T Consensus        55 -----~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           55 -----SGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             -----SSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             -----CCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence                 9999999999999998   877 8999999999999999999999999999864

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=99.38  E-value=2.4e-13  Score=151.10  Aligned_cols=126  Identities=17%  Similarity=0.196  Sum_probs=102.6

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCC--------CCCHHHHHHHHHhccCCCCCceeechhhh---chhHHHH
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS--------TLTEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTSLK  390 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~--------~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~~~  390 (483)
                      ..+++++|..+| |++|.|+.+||..+|+.++.        .++.++++.+++.+|.|++|.+...++..   ..+.+..
T Consensus       533 ~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~l~~  611 (900)
T 1qxp_A          533 DDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLT  611 (900)
T ss_dssp             --------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence            778999999999 99999999999999999875        78999999999999999999855444332   3477899


Q ss_pred             HHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          391 DFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       391 ~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +|+.||+|+        +|+|+.+||+.+++.+|.. ++++++.++..+| |++|.|+|+||+.+|..
T Consensus       612 ~F~~~D~d~--------~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~  670 (900)
T 1qxp_A          612 IFRKFDLDK--------SGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR  670 (900)
T ss_dssp             HHGGGCTTC--------CSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHH
T ss_pred             HHHhhCCCC--------CCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence            999999999        9999999999999999987 8999999999999 99999999999998763

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.37  E-value=7.7e-13  Score=107.72  Aligned_cols=96  Identities=24%  Similarity=0.346  Sum_probs=82.1

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccc
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNIL  402 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~  402 (483)
                      .++.++|..+|  ++|.|+.+||..++...                             ....+.++.+|+.||+++   
T Consensus         9 ~e~~~~~~~~d--~~g~i~~~eF~~~~~~~-----------------------------~~~~~~l~~~F~~~D~d~---   54 (109)
T 1rwy_A            9 EDIKKAIGAFT--AADSFDHKKFFQMVGLK-----------------------------KKSADDVKKVFHILDKDK---   54 (109)
T ss_dssp             HHHHHHHHTTC--STTCCCHHHHHHHHTGG-----------------------------GSCHHHHHHHHHHHSTTC---
T ss_pred             HHHHHHHHHcC--CCCcEeHHHHHHHHhcC-----------------------------cchHHHHHHHHHHHCCCC---
Confidence            35777888888  88899999998776311                             013467889999999999   


Q ss_pred             hhccccccccHHHHHHHHhhC---CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          403 IRIMISIYITADELEAAFKEY---NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       403 ~~~~~~g~i~~~el~~~~~~~---~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                           +|+|+.+||..+++.+   |.. ++++++.++..+|.|++|.|+|+||+.+|..
T Consensus        55 -----~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 1rwy_A           55 -----SGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             -----SSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             -----CCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence                 9999999999999998   666 8999999999999999999999999999864

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.36  E-value=9.9e-13  Score=105.38  Aligned_cols=64  Identities=22%  Similarity=0.483  Sum_probs=60.7

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+++++|+.||+|+        +|+|+.+||+.+|+.+|.. +++++++++.++|.|+||.|+|+||+.+|.
T Consensus        35 ~~el~~~F~~~D~d~--------~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~   99 (100)
T 2lv7_A           35 LEEIREAFKVFDRDG--------NGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG   99 (100)
T ss_dssp             HHHHHHHHHHTCSSC--------SSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCCC--------CCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence            456899999999999        9999999999999999998 999999999999999999999999999873

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.34  E-value=2e-12  Score=105.10  Aligned_cols=95  Identities=19%  Similarity=0.291  Sum_probs=80.4

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccc
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNIL  402 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~  402 (483)
                      .+++++|..+|  ++|.|+.+||..++...                             ....+.++.+|+.||+++   
T Consensus         9 ~e~~~~~~~~d--~~g~i~~~eF~~~~~~~-----------------------------~~~~~~l~~~F~~~D~d~---   54 (108)
T 1rro_A            9 EDIAAALQECQ--DPDTFEPQKFFQTSGLS-----------------------------KMSASQVKDIFRFIDNDQ---   54 (108)
T ss_dssp             HHHHHHHHHTC--STTCCCHHHHHHHHSGG-----------------------------GSCHHHHHHHHHHHCTTC---
T ss_pred             HHHHHHHHHcc--CCCCcCHHHHHHHHhcC-----------------------------cccHHHHHHHHHHhCCCC---
Confidence            45677777787  88899999988776310                             012457889999999999   


Q ss_pred             hhccccccccHHHHHHHHhhC---CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          403 IRIMISIYITADELEAAFKEY---NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       403 ~~~~~~g~i~~~el~~~~~~~---~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                           +|+|+.+||+.+++.+   |.. +++++..++..+|.|++|.|+|+||+.+|+
T Consensus        55 -----~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           55 -----SGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             -----SSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             -----CCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence                 9999999999999999   566 899999999999999999999999999885

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.32  E-value=4.4e-12  Score=115.71  Aligned_cols=117  Identities=17%  Similarity=0.154  Sum_probs=102.1

Q ss_pred             hcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCC-CCCceeechhh----------hchhHHHHHHhhcCCCC
Q 048594          331 QMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADID-GNGTTLNLSLV----------QCKDTSLKDFNIFTKPS  399 (483)
Q Consensus       331 ~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~-~~g~~~~~~~~----------~~~~~~~~~F~~~d~~~  399 (483)
                      .++.+++|.|+.+||..+++.++  ++..++..+|+.+|.+ ++|.+....+.          ...+.+..+|+.+|.++
T Consensus         7 ~mg~~~~g~l~~~el~~~~~~~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~   84 (207)
T 2d8n_A            7 GMGNSKSGALSKEILEELQLNTK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNL   84 (207)
T ss_dssp             -CTTCCTTCCCHHHHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTC
T ss_pred             hhccccCCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCC
Confidence            47899999999999999999987  6899999999999998 68873222111          34567899999999999


Q ss_pred             ccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          400 NILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       400 ~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                              +|+|+.+|+..++..++.. +++++..+|..+|.|++|.|+++||..++..
T Consensus        85 --------~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~  135 (207)
T 2d8n_A           85 --------DGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMA  135 (207)
T ss_dssp             --------CSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             --------CCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence                    9999999999999998876 7889999999999999999999999999876

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=99.32  E-value=8.2e-13  Score=113.43  Aligned_cols=103  Identities=15%  Similarity=0.197  Sum_probs=52.0

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccc
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNIL  402 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~  402 (483)
                      ..-...|..+|.|++|.|+.+||..++..+....               .       ......+.+..+|+.||+|+   
T Consensus        27 ~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~---------------~-------~~~~~~~~l~~~F~~~D~d~---   81 (143)
T 3a4u_B           27 AASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKP---------------E-------AEMSPQELQLHYFKMHDYDG---   81 (143)
T ss_dssp             ----------------------------------------------------------CCCHHHHHHHHHHHTCTTC---
T ss_pred             CCCHHHHHHhCCCCCCcCcHHHHHHHHHHHhccc---------------c-------cccCHHHHHHHHHHHhCCCC---
Confidence            3455789999999999999999998887542100               0       01123567889999999999   


Q ss_pred             hhccccccccHHHHHHHHhhCC--------CC-ChHHHHHHH----HHHcCCCCCcccHHHHHHHH
Q 048594          403 IRIMISIYITADELEAAFKEYN--------MG-DDATIKEIM----FEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       403 ~~~~~~g~i~~~el~~~~~~~~--------~~-~~~~~~~~~----~~~d~~~~g~i~~~ef~~~~  455 (483)
                           +|+|+.+||..++..++        .. +++++.+++    ..+|.|+||.|+|+||+.+|
T Consensus        82 -----dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B           82 -----NNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             -----SSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             -----CCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence                 99999999999999874        34 777876665    89999999999999999876

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=99.31  E-value=3.5e-12  Score=138.04  Aligned_cols=143  Identities=12%  Similarity=0.123  Sum_probs=102.3

Q ss_pred             HhhHHHHHh--hcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccC-------CCCCceeechhh------hchh
Q 048594          322 IQKHKETFK--QMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADI-------DGNGTTLNLSLV------QCKD  386 (483)
Q Consensus       322 ~~~l~~~F~--~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~-------~~~g~~~~~~~~------~~~~  386 (483)
                      ...++++|.  .+|+|++|+|+.+||..+|+.     .+++++++++++|.       +++|.+....+.      ...+
T Consensus       145 ~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~~r~  219 (799)
T 2zkm_X          145 STFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCPRP  219 (799)
T ss_dssp             HHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSCCH
T ss_pred             HHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHccCHH
Confidence            456899999  799999999999999999875     47889999999985       555653332222      2467


Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC-CCC----------ChHHHHHHHHHHcCC----CCCcccHHHH
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY-NMG----------DDATIKEIMFEVDRD----KDGRISYEEF  451 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~-~~~----------~~~~~~~~~~~~d~~----~~g~i~~~ef  451 (483)
                      ++..+|+.||.++        +|+|+.+||+++|+.+ |..          +++++++|+.++|.|    ++|.|+|+||
T Consensus       220 el~~aF~~fD~d~--------~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF  291 (799)
T 2zkm_X          220 EIDEIFTSYHAKA--------KPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGM  291 (799)
T ss_dssp             HHHTTCC----------------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHH
T ss_pred             HHHHHHHHhccCC--------CCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhh
Confidence            8999999999999        9999999999999987 442          568899999999998    8999999999


Q ss_pred             HHHHHcCCCCC---------ccccccccchhccCC
Q 048594          452 CATMKTGTHLR---------GTSYRNLSHIFIGKG  477 (483)
Q Consensus       452 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~  477 (483)
                      +.+|....+.-         +.-.+-|+|-||.++
T Consensus       292 ~~~L~S~~n~~~~~~~~~v~~dm~~PLshYfI~SS  326 (799)
T 2zkm_X          292 VWFLCGPENSVLAQDKLLLHHDMTQPLNHYFINSS  326 (799)
T ss_dssp             HHHHHSTTSCSBCGGGGSSCSCCCSCGGGEEECBB
T ss_pred             hhcccCccccccchhhcccccccCCchhhheEecc
Confidence            99998765321         334567888899876

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=99.27  E-value=4.1e-12  Score=109.95  Aligned_cols=95  Identities=15%  Similarity=0.107  Sum_probs=80.8

Q ss_pred             CCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHH
Q 048594          355 TLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKE  433 (483)
Q Consensus       355 ~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~  433 (483)
                      .+++.++++++..+|.+++-. .........+.++.+|+.||+++        +|+|+.+||+.+|+.+|.. ++++++.
T Consensus        20 ~~~~~~~~~i~~~~d~~~~~~-~~~~l~~~~~~l~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~e~~~   90 (150)
T 2jjz_A           20 ARQERRLAEINREFLCDQKYS-DEENLPEKLTAFKEKYMEFDLNN--------EGEIDLMSLKRMMEKLGVPKTHLEMKK   90 (150)
T ss_dssp             HHHHHHHHHHHHHHHTCGGGS-SCTTHHHHHHHHHHHHTTSCCCT--------TSSBCHHHHHHHHHHTTCCCCHHHHHH
T ss_pred             CCcHHHHHHHHHHhccCCCch-hhHhHHHHHHHHHHHHHHhCCCC--------cCcCCHHHHHHHHHHcCCCCCHHHHHH
Confidence            457888999999998876511 11122344677899999999999        9999999999999999988 8999999


Q ss_pred             HHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          434 IMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       434 ~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ++..+|.|++|.|+|+||+.++...
T Consensus        91 l~~~~D~d~dg~I~~~eF~~~~~~~  115 (150)
T 2jjz_A           91 MISEVTGGVSDTISYRDFVNMMLGK  115 (150)
T ss_dssp             HHHHHHTTSCSSBCHHHHHHHHHSS
T ss_pred             HHHHHCCCCCCcEeHHHHHHHHHHh
Confidence            9999999999999999999999765

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=99.26  E-value=7.9e-13  Score=107.49  Aligned_cols=95  Identities=18%  Similarity=0.257  Sum_probs=80.8

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccc
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNIL  402 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~  402 (483)
                      .+++++|..+|  ++|.|+.+||..++...                             ....+.++.+|+.||+++   
T Consensus         9 ~e~~~l~~~~d--~~g~i~~~eF~~~~~~~-----------------------------~~~~~~l~~~F~~~D~d~---   54 (108)
T 2kyc_A            9 SDIAAALRDCQ--APDSFSPKKFFQISGMS-----------------------------KKSSSQLKEIFRILDNDQ---   54 (108)
T ss_dssp             HHHHHHHTTSC--STTTCCHHHHHHHHTCT-----------------------------TCCSSSHHHHCSSSCSCC---
T ss_pred             HHHHHHHHHcC--CCCcCCHHHHHHHHhhC-----------------------------cccHHHHHHHHHHhCCCC---
Confidence            45777888888  88899999988776310                             012357889999999999   


Q ss_pred             hhccccccccHHHHHHHHhhC---CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          403 IRIMISIYITADELEAAFKEY---NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       403 ~~~~~~g~i~~~el~~~~~~~---~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                           +|+|+.+||..+++.+   |.. +++++..++..+|.|++|.|+|+||+.+|+
T Consensus        55 -----~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  107 (108)
T 2kyc_A           55 -----SGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ  107 (108)
T ss_dssp             -----SSCCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred             -----CCeEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence                 9999999999999998   766 889999999999999999999999999986

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=99.24  E-value=9.3e-12  Score=99.46  Aligned_cols=68  Identities=12%  Similarity=0.235  Sum_probs=60.4

Q ss_pred             chhHHHHHHhhcC-CCCccchhcccc-ccccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMIS-IYITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~-g~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ....++++|+.|| +||        + |+|+.+||+++++.     +|.. ++++++++|+++|.|+||.|+|+||+.+|
T Consensus         8 ~i~~l~~aF~~fd~~dg--------~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~   79 (101)
T 3nso_A            8 AVAAIVCTFQEYAGRCG--------DKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSL   79 (101)
T ss_dssp             HHHHHHHHHHHHHTTSS--------CTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCC--------CCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHH
Confidence            4578899999997 899        6 99999999999986     4555 89999999999999999999999999998


Q ss_pred             HcCC
Q 048594          456 KTGT  459 (483)
Q Consensus       456 ~~~~  459 (483)
                      ....
T Consensus        80 ~~~~   83 (101)
T 3nso_A           80 ACLC   83 (101)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6543

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.23  E-value=5.7e-11  Score=106.99  Aligned_cols=114  Identities=17%  Similarity=0.265  Sum_probs=92.6

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh---------hhchhHHHHHHhh
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL---------VQCKDTSLKDFNI  394 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~---------~~~~~~~~~~F~~  394 (483)
                      .+..+|..+|.|++|.|+.+||..++..+      .++..+|+.+|.+++|.+.....         ..+.+.+..+|+.
T Consensus        64 ~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~  137 (191)
T 1y1x_A           64 TTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRK  137 (191)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            45667888888889999999988887753      56888888888888887322211         1245678889999


Q ss_pred             cCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCc--ccHHHHHHHHH
Q 048594          395 FTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGR--ISYEEFCATMK  456 (483)
Q Consensus       395 ~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~--i~~~ef~~~~~  456 (483)
                      +|.++        +|.|+.+|+..++..+     +.+..++..+|.|++|.  ++|+||+.++.
T Consensus       138 ~D~d~--------dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~  188 (191)
T 1y1x_A          138 FDRQR--------RGSLGFDDYVELSIFV-----CRVRNVFAFYDRERTGQVTFTFDTFIGGSV  188 (191)
T ss_dssp             HCTTC--------SSSBCHHHHHHHHHHH-----HHHHHHHHHHCTTCCSEEEEEHHHHHHHHH
T ss_pred             hCCCC--------CCeEeHHHHHHHHHHH-----HHHHHHHHHhCcCCCceEEeeHHHHHHHHH
Confidence            99999        9999999999999753     67889999999999999  78999999875

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=99.22  E-value=2.6e-11  Score=134.79  Aligned_cols=134  Identities=18%  Similarity=0.210  Sum_probs=109.0

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhh---chhHHHHHHhhcCCC
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTSLKDFNIFTKP  398 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~~~~F~~~d~~  398 (483)
                      +..++++|+.+|.|++|+|+.+||..+++.+|..+++++++.++..+| +++|.+....+..   ..+.+..+|+.+|++
T Consensus       606 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~~~F~~~D~d  684 (900)
T 1qxp_A          606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDPE  684 (900)
T ss_dssp             HHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred             HHHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            367899999999999999999999999999999999999999999999 9999854444332   345678889999988


Q ss_pred             Cccchh---------------------------------------------------ccccccccHHHHHHHHhhCCC--
Q 048594          399 SNILIR---------------------------------------------------IMISIYITADELEAAFKEYNM--  425 (483)
Q Consensus       399 ~~~~~~---------------------------------------------------~~~~g~i~~~el~~~~~~~~~--  425 (483)
                      ++..+.                                                   .. +|.|+.+||++++..++.  
T Consensus       685 ~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~~El~~~L~~~~~~~  763 (900)
T 1qxp_A          685 NTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSATELMNILNKVVTRH  763 (900)
T ss_dssp             CCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCHHHHTTTSCC----C
T ss_pred             CCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHhcccc
Confidence            843221                                                   01 466788999999988763  


Q ss_pred             ------C-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          426 ------G-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       426 ------~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                            . +.++++.++..+|.|+||.|+|+||+.++..
T Consensus       764 ~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~  802 (900)
T 1qxp_A          764 PDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN  802 (900)
T ss_dssp             CSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHH
T ss_pred             cccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHH
Confidence                  3 6789999999999999999999999998743

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.18  E-value=1.1e-10  Score=102.91  Aligned_cols=114  Identities=17%  Similarity=0.243  Sum_probs=80.3

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh---------hhchhHHHHHHhhc
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL---------VQCKDTSLKDFNIF  395 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~---------~~~~~~~~~~F~~~  395 (483)
                      +..+|..+|.|++|.|+.+||..++..+      .++..+|+.+|.+++|.+.....         ..+.+.+..+|+.+
T Consensus        46 ~~~l~~~~D~~~~g~i~~~ef~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~  119 (172)
T 2znd_A           46 VRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF  119 (172)
T ss_dssp             HHHHHHHHCSSSSSEECHHHHHHHHHHH------HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence            3445666666666666666666665532      45666666666666665211111         12345677788888


Q ss_pred             CCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCccc--HHHHHHHHHc
Q 048594          396 TKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRIS--YEEFCATMKT  457 (483)
Q Consensus       396 d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~--~~ef~~~~~~  457 (483)
                      |.++        +|.|+.+|+..++..+     +.+..++..+|.|++|.|+  |+||+.++..
T Consensus       120 d~~~--------dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~  170 (172)
T 2znd_A          120 DRQG--------RGQIAFDDFIQGCIVL-----QRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS  170 (172)
T ss_dssp             CTTC--------SSSEEHHHHHHHHHHH-----HHHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred             CCCC--------CCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence            9999        8999999999988754     6788899999999999995  8999988753

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=99.18  E-value=4.1e-11  Score=97.71  Aligned_cols=68  Identities=18%  Similarity=0.448  Sum_probs=60.8

Q ss_pred             hchhHHHHHHhhcC-CCCccchhccccc-cccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHH
Q 048594          383 QCKDTSLKDFNIFT-KPSNILIRIMISI-YITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCAT  454 (483)
Q Consensus       383 ~~~~~~~~~F~~~d-~~~~~~~~~~~~g-~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~  454 (483)
                      ...+.++.+|+.|| +||        +| +|+.+||+.+|+.     +|.. ++++++++|.++|.|+||.|+|+||+.+
T Consensus        19 ~~~~~l~~aF~~fD~~dg--------dGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~   90 (113)
T 2lnk_A           19 KALDVMVSTFHKYSGKEG--------DKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVF   90 (113)
T ss_dssp             HHHHHHHHHHHHTTTTTS--------CTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHcccCC--------CCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence            34678999999999 899        87 9999999999986     6666 8899999999999999999999999999


Q ss_pred             HHcC
Q 048594          455 MKTG  458 (483)
Q Consensus       455 ~~~~  458 (483)
                      |...
T Consensus        91 m~~~   94 (113)
T 2lnk_A           91 LSCI   94 (113)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8653

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.18  E-value=2.8e-11  Score=108.80  Aligned_cols=110  Identities=22%  Similarity=0.335  Sum_probs=86.4

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh--------------------
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV--------------------  382 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~--------------------  382 (483)
                      ..+..+|..+|.|++|.|+.+||..++..++...+++++..+|..+|.+++|.+......                    
T Consensus        63 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~  142 (193)
T 1bjf_A           63 KFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDE  142 (193)
T ss_dssp             HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGG
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCccc
Confidence            357889999999999999999999999999888889999999999999999983322211                    


Q ss_pred             -hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcc
Q 048594          383 -QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRI  446 (483)
Q Consensus       383 -~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i  446 (483)
                       ...+.+..+|+.+|+++        +|+|+.+|+.+++..     ++++.+++ .+|.|+||.|
T Consensus       143 ~~~~~~~~~~f~~~D~d~--------dG~I~~~Ef~~~~~~-----~~~~~~~~-~~D~~~dG~i  193 (193)
T 1bjf_A          143 STPEKRTEKIFRQMDTNR--------DGKLSLEEFIRGAKS-----DPSIVRLL-QCDPSSAGQF  193 (193)
T ss_dssp             SSHHHHHHHHHHHSCTTC--------SSEECHHHHHHHHHH-----CTHHHHTT-CC--------
T ss_pred             ccHHHHHHHHHHHhCCCC--------CCeEeHHHHHHHHhc-----CHHHHHHh-ccCCCCCCCC
Confidence             11244889999999999        999999999999973     56788999 9999999986

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=99.17  E-value=6e-11  Score=87.02  Aligned_cols=63  Identities=19%  Similarity=0.332  Sum_probs=59.8

Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+..+|+.+|+++        +|+|+.+|+..+++.+|.. +++++..++..+|.|++|.|+|+||+.++..
T Consensus         2 ~l~~~F~~~D~d~--------~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            2 SAKRVFEKFDKNK--------DGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             THHHHHHHHCTTS--------SSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            5788999999999        9999999999999999988 8999999999999999999999999999864

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.16  E-value=1.1e-10  Score=104.55  Aligned_cols=113  Identities=18%  Similarity=0.217  Sum_probs=97.6

Q ss_pred             CCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCC-CCCceeechhh----------hchhHHHHHHhhcCCCCccch
Q 048594          335 NDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADID-GNGTTLNLSLV----------QCKDTSLKDFNIFTKPSNILI  403 (483)
Q Consensus       335 d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~-~~g~~~~~~~~----------~~~~~~~~~F~~~d~~~~~~~  403 (483)
                      +.+|.|+.+|+..+.+.++  ++..++.++|..+|.+ ++|.+......          ...+.+..+|+.+|.++    
T Consensus         3 ~~~~~l~~~el~~~~~~~~--~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~----   76 (190)
T 2l2e_A            3 KSQSKLSQDQLQDLVRSTR--FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADK----   76 (190)
T ss_dssp             CSSCCSCHHHHHHHHHHHC--SCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSS----
T ss_pred             cccccCCHHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCC----
Confidence            4678999999999999875  5888999999999999 79973222211          23456889999999999    


Q ss_pred             hccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          404 RIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       404 ~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                          +|.|+.+|+..++..++.. +++++..+|..+|.|++|.|+++||..++..
T Consensus        77 ----~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~  127 (190)
T 2l2e_A           77 ----NGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA  127 (190)
T ss_dssp             ----TTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred             ----CCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence                9999999999999999877 8889999999999999999999999999876

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=99.16  E-value=6.6e-11  Score=95.15  Aligned_cols=68  Identities=18%  Similarity=0.468  Sum_probs=58.9

Q ss_pred             chhHHHHHHhhcC-CCCccchhccccccccHHHHHHHHhh-CC----CC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMISIYITADELEAAFKE-YN----MG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~g~i~~~el~~~~~~-~~----~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ....++++|+.|| +||+       +|+|+.+||+.+|+. +|    .. ++++++++|+++|.|+||.|+|+||+.+|.
T Consensus        11 ~~~~l~~aF~~fD~~dgd-------~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~   83 (104)
T 3zwh_A           11 ALDVMVSTFHKYSGKEGD-------KFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS   83 (104)
T ss_dssp             HHHHHHHHHHHHHTSSSS-------TTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCC-------CCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHH
Confidence            4578899999997 7782       389999999999996 54    33 789999999999999999999999999986


Q ss_pred             cC
Q 048594          457 TG  458 (483)
Q Consensus       457 ~~  458 (483)
                      .-
T Consensus        84 ~~   85 (104)
T 3zwh_A           84 SI   85 (104)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=99.15  E-value=6.6e-11  Score=93.29  Aligned_cols=68  Identities=18%  Similarity=0.458  Sum_probs=58.1

Q ss_pred             chhHHHHHHhhcC-CCCccchhccccccccHHHHHHHHhh-CC----CC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMISIYITADELEAAFKE-YN----MG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~g~i~~~el~~~~~~-~~----~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+.++++|+.|| +||+       +|+|+.+||+++++. +|    .. ++++++++++++|.|+||.|+|+||+.+|.
T Consensus         8 ~~~~l~~~F~~fd~~dg~-------~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~   80 (93)
T 4eto_A            8 ALDVMVSTFHKYSGKEGD-------KFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS   80 (93)
T ss_dssp             HHHHHHHHHHHHHTSSSS-------TTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCCC-------CCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence            4578899999998 6882       389999999999986 64    33 789999999999999999999999999986


Q ss_pred             cC
Q 048594          457 TG  458 (483)
Q Consensus       457 ~~  458 (483)
                      .-
T Consensus        81 ~~   82 (93)
T 4eto_A           81 CI   82 (93)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=99.15  E-value=7.3e-11  Score=92.72  Aligned_cols=82  Identities=28%  Similarity=0.469  Sum_probs=69.4

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCCCC
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLR  462 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~  462 (483)
                      ..+.+..+|+.||+++        +|+|+.+||+.+++.+|.. +++++..++..+|.|++|.|+|+||+.++.......
T Consensus         7 ~~~~l~~~F~~~D~d~--------~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~   78 (92)
T 2kn2_A            7 AEEELKEAFKVFDKDQ--------NGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGG   78 (92)
T ss_dssp             HHHHHHHHHHHHCTTC--------SSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHHCCCC--------CCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCC
Confidence            4567899999999999        9999999999999999988 999999999999999999999999999987665432


Q ss_pred             c-cccccccchh
Q 048594          463 G-TSYRNLSHIF  473 (483)
Q Consensus       463 ~-~~~~~~~~~~  473 (483)
                      . .....++.+|
T Consensus        79 ~~~~~~~l~~aF   90 (92)
T 2kn2_A           79 GGNGWSRLRRKF   90 (92)
T ss_dssp             CCHHHHHHHHHH
T ss_pred             CCchHHHHHHHh
Confidence            2 2234566555

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=99.14  E-value=1.1e-10  Score=92.25  Aligned_cols=66  Identities=29%  Similarity=0.483  Sum_probs=62.1

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+.++.+|+.||+++        +|+|+.+||+.+++.+|.. +++++++++..+|.|+||.|+|+||+.+|..
T Consensus        27 ~~~~l~~~F~~~D~d~--------~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~   93 (94)
T 2kz2_A           27 SEEEIREAFRVEDKDG--------NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA   93 (94)
T ss_dssp             CHHHHHHHHHHHCTTC--------CSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHCCCC--------cCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence            4678999999999999        9999999999999999988 9999999999999999999999999999864

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=99.13  E-value=7.4e-11  Score=90.29  Aligned_cols=69  Identities=25%  Similarity=0.338  Sum_probs=62.2

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCC-CC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCCC
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN-MG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHL  461 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~-~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~  461 (483)
                      ..+.+. +|+.||.++        +|+|+.+||..+++.+| .. +++++..++..+|.|++|.|+|+||+.++......
T Consensus         7 ~~~~l~-~F~~~D~d~--------~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~   77 (81)
T 1c7v_A            7 EEEILR-AFKVFDANG--------DGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSKNA   77 (81)
T ss_dssp             CHHHHH-HHHHHSCSG--------GGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC---
T ss_pred             HHHHHH-HHHHHCCCC--------CCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhhh
Confidence            457789 999999999        99999999999999999 77 89999999999999999999999999999876543

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=99.12  E-value=6.9e-11  Score=87.82  Aligned_cols=66  Identities=27%  Similarity=0.416  Sum_probs=61.7

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+.+..+|+.+|+++        +|+|+.+||..+++.+|.. +++++..++..+|.|++|.|+|+||+.++..
T Consensus         4 ~~~~l~~~F~~~D~d~--------~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   70 (71)
T 2b1u_A            4 GLEDLQVAFRAFDQDG--------DGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ   70 (71)
T ss_dssp             THHHHHHHHTTSCCSS--------SSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred             cHHHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            4577899999999999        9999999999999999988 8999999999999999999999999999853

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.12  E-value=2e-10  Score=105.18  Aligned_cols=120  Identities=19%  Similarity=0.300  Sum_probs=98.7

Q ss_pred             HHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh---------------hhc
Q 048594          320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL---------------VQC  384 (483)
Q Consensus       320 ~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~---------------~~~  384 (483)
                      .....+.++|..+|.|++|.|+.+||..++..++...+.+++..+|+.+|.+++|.+.....               ...
T Consensus        54 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~  133 (211)
T 2ggz_A           54 KANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSP  133 (211)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTH
T ss_pred             chHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccH
Confidence            44456899999999999999999999999999988888899999999999999998322211               112


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      .+.+..+|+.+|.++        +|.|+.+||..++..     .+++.+++..       .++|++|+.+|..+.
T Consensus       134 ~~~~~~~f~~~D~d~--------dG~I~~~Ef~~~~~~-----~~~~~~~~~~-------~~d~~~f~~~~~~~~  188 (211)
T 2ggz_A          134 EEFINLVFHKIDINN--------DGELTLEEFINGMAK-----DQDLLEIVYK-------SFDFSNVLRVICNGK  188 (211)
T ss_dssp             HHHHHHHHHHHCTTC--------SSSBCHHHHHHHHHT-----TTTTHHHHHH-------HSCTTHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCC--------CCCCcHHHHHHHHHh-----CHHHHHHHhc-------cCCHHHHHHHHhcCC
Confidence            355889999999999        999999999999973     4566777763       355999999998775

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.11  E-value=3.9e-10  Score=99.98  Aligned_cols=113  Identities=13%  Similarity=0.179  Sum_probs=92.6

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeech-------------hhhchhHHH
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLS-------------LVQCKDTSL  389 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~-------------~~~~~~~~~  389 (483)
                      ..++.+|..+|.|++|.|+.+||..++..+      .++..+|+.+| |++|.+....             ...+.+.+.
T Consensus        46 ~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~  118 (174)
T 2i7a_A           46 DECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLH  118 (174)
T ss_dssp             HHHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHH
Confidence            357788999999999999999999888754      57889999999 9999832211             112456788


Q ss_pred             HHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCC-cccHHHHHHHHH
Q 048594          390 KDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDG-RISYEEFCATMK  456 (483)
Q Consensus       390 ~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g-~i~~~ef~~~~~  456 (483)
                      .+++.+| ++        +|.|+.+|+..++..+     +.+.++|+.+|.|++| .++++||+.++.
T Consensus       119 ~l~~~~d-d~--------dG~I~~~EF~~~~~~~-----~~~~~~F~~~D~d~~GI~~~~~Ef~~~~~  172 (174)
T 2i7a_A          119 LVTLRYS-DS--------VGRVSFPSLVCFLMRL-----EAMAKTFRNLSKDGKGLYLTEMEWMSLVM  172 (174)
T ss_dssp             HHHHHHS-CT--------TSEECHHHHHHHHHHH-----HHHHHHHHHHCSSSSCCCCCHHHHHHHHH
T ss_pred             HHHHHHc-CC--------CCeEcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCceecHHHHHHHHH
Confidence            8999999 89        8999999999998753     5788999999999999 449999998764

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.11  E-value=1.2e-10  Score=91.69  Aligned_cols=65  Identities=20%  Similarity=0.335  Sum_probs=59.7

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ...++++|+.||+|+        +|+|+.+|++.+|+.+|. +++++.+++..+|.|+||.|+|+||+.+|+.-
T Consensus         8 ~~~~~~~F~~~D~d~--------dG~I~~~el~~~l~~~g~-~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~   72 (92)
T 1fi6_A            8 RQYYVNQFKTIQPDL--------NGFIPGSAAKEFFTKSKL-PILELSHIWELSDFDKDGALTLDEFCAAFHLV   72 (92)
T ss_dssp             HHHHHHHHTTTCCST--------TCEEEHHHHHHHHHHHSS-CHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence            456889999999999        999999999999999986 68899999999999999999999999998643

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.10  E-value=1.1e-10  Score=93.27  Aligned_cols=64  Identities=19%  Similarity=0.191  Sum_probs=60.0

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+.++++|+.||+|+        +|+|+.+|++.+|+.+|. +++++.+|+..+|.|+||.|+|+||+.+|+.
T Consensus        10 ~~~~~~~F~~~D~d~--------dG~Is~~el~~~l~~~~l-~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~   73 (99)
T 1qjt_A           10 NPVYEKYYRQVEAGN--------TGRVLALDAAAFLKKSGL-PDLILGKIWDLADTDGKGVLSKQEFFVALRL   73 (99)
T ss_dssp             CTHHHHHHHHHCCTT--------SSCCCSHHHHHHHHTSSS-CHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCC--------CCcCCHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            467899999999999        999999999999999987 6889999999999999999999999999864

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=99.10  E-value=1.4e-10  Score=92.53  Aligned_cols=67  Identities=18%  Similarity=0.347  Sum_probs=59.9

Q ss_pred             chhHHHHHHhhcC-CCCccchhccccc-cccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMISI-YITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~g-~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ..+.++.+|+.|| ++|        +| +|+.+||+.+++.     +|.. +++++++++.++|.|+||.|+|+||+.+|
T Consensus         8 ~~~~l~~~F~~fDd~dg--------~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~   79 (99)
T 2y5i_A            8 AMDALITVFHNYSGSEG--------DKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLV   79 (99)
T ss_dssp             HHHHHHHHHHHHHTSSS--------STTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCC--------CcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence            3567899999997 899        87 9999999999987     5666 88999999999999999999999999998


Q ss_pred             HcC
Q 048594          456 KTG  458 (483)
Q Consensus       456 ~~~  458 (483)
                      ...
T Consensus        80 ~~~   82 (99)
T 2y5i_A           80 AAL   82 (99)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=99.09  E-value=1.4e-10  Score=91.87  Aligned_cols=67  Identities=15%  Similarity=0.387  Sum_probs=55.5

Q ss_pred             chhHHHHHHhhcC-CCCccchhccccccccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMISIYITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~g~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+.++.+|+.|| +||+       +|+|+.+||+.+++.     +|.. +++++++++..+|.|+||.|+|+||+.+|.
T Consensus         7 ~~~~l~~~F~~fD~~dgd-------~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~   79 (95)
T 1j55_A            7 AMGMIIDVFSRYSGSEGS-------TQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVA   79 (95)
T ss_dssp             HHHHHHHHHHHHTTSSSC-------TTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCC-------CCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence            3567899999999 7882       389999999999987     5655 788999999999999999999999999986


Q ss_pred             c
Q 048594          457 T  457 (483)
Q Consensus       457 ~  457 (483)
                      .
T Consensus        80 ~   80 (95)
T 1j55_A           80 A   80 (95)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.09  E-value=1.3e-10  Score=92.10  Aligned_cols=64  Identities=16%  Similarity=0.189  Sum_probs=59.4

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ...++++|+.||+|+        +|+|+.+|++.+|+.+|. +++++.+++..+|.|+||.|+|+||+.+|+.
T Consensus         9 ~~~~~~~F~~~D~d~--------dG~I~~~el~~~l~~~g~-~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~   72 (95)
T 1c07_A            9 KAKYDEIFLKTDKDM--------DGFVSGLEVREIFLKTGL-PSTLLAHIWSLCDTKDCGKLSKDQFALAFHL   72 (95)
T ss_dssp             HHHHHHHHHHHCTTC--------SSEECHHHHHHHHHTTTC-CHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred             HHHHHHHHHHhCCCC--------CCcEeHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            467899999999999        999999999999999986 6889999999999999999999999999854

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.09  E-value=1.3e-10  Score=87.84  Aligned_cols=65  Identities=26%  Similarity=0.459  Sum_probs=61.1

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ...++.+|+.||+++        +|+|+.+||..+++.+|.. +++++..++..+|.|++|.|+|+||+.++..
T Consensus         6 ~~~l~~~F~~~D~d~--------~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A            6 KQEIKEAFDLFDTNK--------TGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             HHHHHHHHHHHCCSS--------SSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             HHHHHHHHHHhCCCC--------CCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            467899999999999        9999999999999999988 8899999999999999999999999999864

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=99.08  E-value=2.6e-10  Score=89.22  Aligned_cols=66  Identities=24%  Similarity=0.361  Sum_probs=61.7

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ...+..+|+.||+++        +|+|+.+||..+++.+|.. +++++..++..+|.|++|.|+|+||+.++...
T Consensus        19 ~~~l~~~F~~~D~d~--------~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~   85 (90)
T 1avs_A           19 IAEFKAAFDMFDADG--------GGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ   85 (90)
T ss_dssp             HHHHHHHHHHHCTTC--------SSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence            467889999999999        9999999999999999988 89999999999999999999999999998653

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=99.08  E-value=1.8e-11  Score=101.96  Aligned_cols=69  Identities=20%  Similarity=0.125  Sum_probs=57.6

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCCCCccc
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGTS  465 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~  465 (483)
                      +.++.+|+.||            |+|+.+||+.+|+.+|. +++++++++.++|.|+||.|+|+||+.+|..-...+...
T Consensus        50 ~~l~~aF~~fD------------G~I~~~El~~~l~~lG~-t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~  116 (123)
T 2kld_A           50 DDISESLRQGG------------GKLNFDELRQDLKGKGH-TDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKEREDL  116 (123)
T ss_dssp             -CCSCSSTTTT------------TCEEHHHHHHHTTTCCS-SHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTTCCCSCC
T ss_pred             HHHHHHHHHhC------------CCCCHHHHHHHHHHhCC-CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHhHHHH
Confidence            45667898887            67999999999999999 899999999999999999999999999986555443333


Q ss_pred             cc
Q 048594          466 YR  467 (483)
Q Consensus       466 ~~  467 (483)
                      +.
T Consensus       117 ~~  118 (123)
T 2kld_A          117 DL  118 (123)
T ss_dssp             CS
T ss_pred             HH
Confidence            33

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=99.07  E-value=3.1e-10  Score=87.83  Aligned_cols=67  Identities=25%  Similarity=0.383  Sum_probs=62.6

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTH  460 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~  460 (483)
                      ...+..+|+.||+++        +|+|+.+||..+++.+| . +++++..++..+|.|++|.|+|+||+.++.....
T Consensus        10 ~~~l~~~F~~~D~d~--------~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~   77 (86)
T 2opo_A           10 IADRERIFKRFDTNG--------DGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRG   77 (86)
T ss_dssp             HHHHHHHHHHHCTTC--------SSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHCCCC--------CCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCcc
Confidence            567899999999999        99999999999999999 7 9999999999999999999999999999987643

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=99.07  E-value=2.5e-10  Score=89.81  Aligned_cols=66  Identities=15%  Similarity=0.256  Sum_probs=59.3

Q ss_pred             chhHHHHHHhhcCCCCccchhccccc---cccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHH
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISI---YITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCAT  454 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g---~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~  454 (483)
                      ..+.++.+|+.|| ++        +|   +|+.+||+.+|+.     +|.. +++++++++..+|.|+||.|+|+||+.+
T Consensus         7 ~~~~l~~~F~~~D-~~--------dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~   77 (92)
T 3rm1_A            7 AVVALIDVFHQYS-GR--------EGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAF   77 (92)
T ss_dssp             HHHHHHHHHHHHH-TS--------SSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHH
T ss_pred             HHHHHHHHHHHHc-cC--------CCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHH
Confidence            3567899999999 66        55   9999999999999     8877 8999999999999999999999999999


Q ss_pred             HHcC
Q 048594          455 MKTG  458 (483)
Q Consensus       455 ~~~~  458 (483)
                      |..-
T Consensus        78 ~~~l   81 (92)
T 3rm1_A           78 VAMI   81 (92)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8643

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=99.07  E-value=2.1e-10  Score=91.57  Aligned_cols=70  Identities=14%  Similarity=0.245  Sum_probs=58.7

Q ss_pred             hchhHHHHHHhhcCCCC--ccchhccccccccHHHHHHHHhhCC-CC-----ChHHHHHHHHHHcCCCCCcccHHHHHHH
Q 048594          383 QCKDTSLKDFNIFTKPS--NILIRIMISIYITADELEAAFKEYN-MG-----DDATIKEIMFEVDRDKDGRISYEEFCAT  454 (483)
Q Consensus       383 ~~~~~~~~~F~~~d~~~--~~~~~~~~~g~i~~~el~~~~~~~~-~~-----~~~~~~~~~~~~d~~~~g~i~~~ef~~~  454 (483)
                      ...+.++++|+.||+++  +       +|+|+.+||+.+++.++ ..     ++++++++|.++|.|+||.|+|+||+.+
T Consensus         8 ~~i~~l~~~F~~fD~~~g~~-------~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~   80 (100)
T 3nxa_A            8 KAVIVLVENFYKYVSKYSLV-------KNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTL   80 (100)
T ss_dssp             HHHHHHHHHHHHTSCTTCSC-------TTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCcCCCC-------CCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence            34578999999999963  2       69999999999998743 21     2688999999999999999999999999


Q ss_pred             HHcCC
Q 048594          455 MKTGT  459 (483)
Q Consensus       455 ~~~~~  459 (483)
                      |..-.
T Consensus        81 m~~~~   85 (100)
T 3nxa_A           81 IGGIT   85 (100)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            97643

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=99.07  E-value=2e-10  Score=87.20  Aligned_cols=65  Identities=25%  Similarity=0.395  Sum_probs=60.7

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ++++..+|+.||+++        +|+|+.+|+..+++.+| . +++++..++..+|.|++|.|+|+||+.++...
T Consensus         2 ~~~l~~~F~~~D~~~--------~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~   67 (78)
T 1k9u_A            2 ADDMERIFKRFDTNG--------DGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN   67 (78)
T ss_dssp             -CHHHHHHHHHCTTC--------SSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            357899999999999        99999999999999999 7 89999999999999999999999999999765

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.07  E-value=1.2e-10  Score=94.79  Aligned_cols=64  Identities=20%  Similarity=0.356  Sum_probs=59.3

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+.++++|+.||+|+        +|+|+.+|++.+|+.+|. +++++.+|+..+|.|+||.|+|+||+.+|+.
T Consensus        21 ~~~~~~~F~~~D~d~--------dG~Is~~el~~~l~~~gl-~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~   84 (110)
T 1iq3_A           21 REYYVNQFRSLQPDP--------SSFISGSVAKNFFTKSKL-SIPELSYIWELSDADCDGALTLPEFCAAFHL   84 (110)
T ss_dssp             HHHHHHHHHHHCCSS--------SSEEEHHHHHHHCCSSSC-SSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCC--------CCeEcHHHHHHHHHHcCC-CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            567899999999999        999999999999999886 6778999999999999999999999999854

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=99.06  E-value=1.7e-10  Score=95.09  Aligned_cols=65  Identities=20%  Similarity=0.452  Sum_probs=58.1

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+.+..+|+.||.+.         |+|+.+||+++|+.     +|.. ++++++++|.++|.|+||.|+|+||+.+|..
T Consensus        13 ~ie~l~~~F~~yd~dd---------G~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~   83 (121)
T 4drw_A           13 AMETMMFTFHKFAGDK---------GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG   83 (121)
T ss_dssp             HHHHHHHTTGGGSCTT---------CSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCC---------CEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            3477899999999654         99999999999987     5766 8999999999999999999999999999854

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=99.05  E-value=1.8e-10  Score=93.03  Aligned_cols=67  Identities=15%  Similarity=0.266  Sum_probs=58.6

Q ss_pred             chhHHHHHHhhcC-CCCccchhcccc-ccccHHHHHHHHhh-CCCC--ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMIS-IYITADELEAAFKE-YNMG--DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~-g~i~~~el~~~~~~-~~~~--~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ..+.++++|+.|| +||        + |+|+.+||+.+|+. +|..  ++++++++|.++|.|+||.|+|+||+.+|...
T Consensus        20 ~~~~l~~aF~~fD~~dg--------~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~   91 (106)
T 2h2k_A           20 SIETVVTTFFTFARQEG--------RKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL   91 (106)
T ss_dssp             HHHHHHHHHHHHHTSSS--------STTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCC--------CCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            3567999999999 788        6 79999999999986 7743  35789999999999999999999999998653

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=99.05  E-value=9.3e-11  Score=92.91  Aligned_cols=66  Identities=18%  Similarity=0.359  Sum_probs=58.9

Q ss_pred             chhHHHHHHhhcC-CCCccchhccccc-cccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMISI-YITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~g-~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ..+.++++|+.|| ++|        +| +|+.+||+.+++.     +|.. +++++++++..+|.|+||.|+|+||+.+|
T Consensus        10 ~~~~l~~~F~~fD~~dg--------~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~   81 (95)
T 2wcb_A           10 HLEGIVNIFHQYSVRKG--------HFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLV   81 (95)
T ss_dssp             HHHHHHHHHHHHHTSSS--------STTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCC--------CCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHH
Confidence            3567899999999 899        87 9999999999986     5555 88999999999999999999999999998


Q ss_pred             Hc
Q 048594          456 KT  457 (483)
Q Consensus       456 ~~  457 (483)
                      ..
T Consensus        82 ~~   83 (95)
T 2wcb_A           82 AI   83 (95)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=99.05  E-value=4e-10  Score=90.92  Aligned_cols=63  Identities=16%  Similarity=0.241  Sum_probs=58.2

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ...++++|+.||+ +        +|+|+.+|++.+|+.+|. +++++.+|+..+|.|+||.|+|+||+.+|..
T Consensus        14 ~~~~~~~F~~~D~-~--------dG~Is~~el~~~l~~~gl-~~~el~~i~~~~D~d~dG~id~~EF~~~m~~   76 (106)
T 1eh2_A           14 KAKYDAIFDSLSP-V--------NGFLSGDKVKPVLLNSKL-PVDILGRVWELSDIDHDGMLDRDEFAVAMFL   76 (106)
T ss_dssp             HHHHHHHHTTSCC-S--------SSCCBHHHHHHHHHTTTC-CHHHHHHHHHHHCSSCSSBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC-C--------CCeEcHHHHHHHHHHcCC-CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            4668899999999 9        999999999999999986 6889999999999999999999999998854

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.05  E-value=4.1e-10  Score=103.83  Aligned_cols=114  Identities=14%  Similarity=0.112  Sum_probs=86.6

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh---------hhchhHHHHHHhh
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL---------VQCKDTSLKDFNI  394 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~---------~~~~~~~~~~F~~  394 (483)
                      .+..+|..+|.|++|.|+.+||..++..+      .++..+|+.+|.|++|.+.....         ..+.+.+...|+.
T Consensus        88 ~~~~l~~~~D~d~dg~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~  161 (220)
T 3sjs_A           88 TALRMMRIFDTDFNGHISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRL  161 (220)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            45667777788888888888888877764      56778888888888887322111         1235667888999


Q ss_pred             cCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHH-cCCCCC------cccHHHHHHHHHc
Q 048594          395 FTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEV-DRDKDG------RISYEEFCATMKT  457 (483)
Q Consensus       395 ~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~-d~~~~g------~i~~~ef~~~~~~  457 (483)
                      +| ++        +|.|+.+|+.+++..+     ..+.++++.+ |.+++|      .|+|+||+.++..
T Consensus       162 ~d-d~--------dg~I~~~eF~~~~~~l-----~~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~  217 (220)
T 3sjs_A          162 FA-RG--------MAFCDLNCWIAICAFA-----AQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS  217 (220)
T ss_dssp             HC-----------CCSEEHHHHHHHHHHH-----HHHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred             hc-CC--------CCcCcHHHHHHHHHHH-----HHHHHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence            99 89        8999999999999765     3678899998 999999      8999999998754

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.03  E-value=6.4e-10  Score=99.56  Aligned_cols=113  Identities=16%  Similarity=0.240  Sum_probs=96.1

Q ss_pred             CCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCC-CCCceeechhh----------hchhHHHHHHhhcCCCCccch
Q 048594          335 NDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADID-GNGTTLNLSLV----------QCKDTSLKDFNIFTKPSNILI  403 (483)
Q Consensus       335 d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~-~~g~~~~~~~~----------~~~~~~~~~F~~~d~~~~~~~  403 (483)
                      ++.++|+.+++..+.+..  .++++++..+++.+|.+ ++|.+......          ...+.+..+|+.+|.++    
T Consensus         3 ~~~~~l~~~~l~~l~~~~--~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~----   76 (190)
T 1fpw_A            3 AKTSKLSKDDLTCLKQST--YFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDN----   76 (190)
T ss_dssp             CCSCCSTTHHHHHHTTTC--CSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSC----
T ss_pred             cccCCCCHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCC----
Confidence            467889999999988875  57899999999999987 78873222211          23456889999999999    


Q ss_pred             hccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          404 RIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       404 ~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                          +|.|+.+|+..++..++.. +++++..+|..+|.|++|.|+++||..++..
T Consensus        77 ----~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~  127 (190)
T 1fpw_A           77 ----NGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS  127 (190)
T ss_dssp             ----SSEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred             ----CCcEeHHHHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence                9999999999999998877 7889999999999999999999999999876

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=99.03  E-value=9.3e-11  Score=85.80  Aligned_cols=61  Identities=16%  Similarity=0.201  Sum_probs=57.2

Q ss_pred             HHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          389 LKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       389 ~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +.+|+.+|.++        +|+|+.+|+..+++.+|.. +++++..++..+|.|++|.|+|+||+.++..
T Consensus         3 ~~~F~~~D~d~--------~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~   64 (66)
T 3li6_A            3 EALFKEIDVNG--------DGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS   64 (66)
T ss_dssp             CHHHHHHCTTC--------SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred             HHHHHHHCCCC--------CCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            57899999999        9999999999999999877 8899999999999999999999999999864

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=99.02  E-value=5.5e-10  Score=90.47  Aligned_cols=68  Identities=15%  Similarity=0.154  Sum_probs=63.1

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      ....+..+|+.||+++        +|+|+.+||..+++.+|.. +++++..++..+|.|++|.|+|+||+.++....
T Consensus        30 ~~~~l~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~~   98 (107)
T 2d58_A           30 KLEGFKEKYMEFDLNG--------NGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR   98 (107)
T ss_dssp             HHHHHHHHHTTSCCCT--------TSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSSS
T ss_pred             HHHHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcc
Confidence            4567899999999999        9999999999999999988 999999999999999999999999999996553

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=99.01  E-value=1.3e-09  Score=118.10  Aligned_cols=142  Identities=11%  Similarity=0.111  Sum_probs=114.9

Q ss_pred             hhHHHHHhh--cCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCC-------CCCceeech------hhhchhH
Q 048594          323 QKHKETFKQ--MDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADID-------GNGTTLNLS------LVQCKDT  387 (483)
Q Consensus       323 ~~l~~~F~~--~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~-------~~g~~~~~~------~~~~~~~  387 (483)
                      ..++++|..  +|.|++|.|+.+|+..+|+.     ..+++..+++.+|.+       ++|.+...+      .+...++
T Consensus       150 ~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~-----~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~R~E  224 (885)
T 3ohm_B          150 TFLRKAYTKLKLQVNQDGRIPVKNILKMFSA-----DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCLRPD  224 (885)
T ss_dssp             HHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG-----GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSCCHH
T ss_pred             HHHHHHHHHhcCccCCCCccCHHHHHHHHhc-----CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCCHHH
Confidence            467888988  89999999999999998885     467899999999987       444422222      2234678


Q ss_pred             HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCC-C---------C-ChHHHHHHHHHHcCC----CCCcccHHHHH
Q 048594          388 SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN-M---------G-DDATIKEIMFEVDRD----KDGRISYEEFC  452 (483)
Q Consensus       388 ~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~-~---------~-~~~~~~~~~~~~d~~----~~g~i~~~ef~  452 (483)
                      ++.+|+.||.++        +|+||.+||.++|+..+ .         . +++++.+|+.+++.+    ++|.|++++|.
T Consensus       225 I~eiF~~ydsd~--------~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~  296 (885)
T 3ohm_B          225 IDKILLEIGAKG--------KPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFS  296 (885)
T ss_dssp             HHHHHHHTTCCS--------TTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHH
T ss_pred             HHHHHHHHhcCC--------CCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhh
Confidence            999999999999        89999999999999874 3         2 578899999999998    78999999999


Q ss_pred             HHHHcCCCC---------CccccccccchhccCC
Q 048594          453 ATMKTGTHL---------RGTSYRNLSHIFIGKG  477 (483)
Q Consensus       453 ~~~~~~~~~---------~~~~~~~~~~~~~~~~  477 (483)
                      .+|....+.         .+.-.+-|+|-||.++
T Consensus       297 ~yL~S~~~~~~~~~~~~v~~dm~~Pls~YfI~ss  330 (885)
T 3ohm_B          297 RYLGGEENGILPLEALDLSTDMTQPLSAYFINSS  330 (885)
T ss_dssp             HHHTSTTSCSSCHHHHSSCSCCCSCGGGEEECCB
T ss_pred             hhccCcccCccCccccccccccCcchhhheeecc
Confidence            999865432         2344578899999876

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.00  E-value=1.3e-09  Score=96.21  Aligned_cols=112  Identities=15%  Similarity=0.201  Sum_probs=87.6

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh---------hhchhHHHHHHh
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL---------VQCKDTSLKDFN  393 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~---------~~~~~~~~~~F~  393 (483)
                      ..+..+|..+|.|++|.|+.+||..++..+      .++..+|+.+|.+++|.+.....         ..+.+.+..+|+
T Consensus        47 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~  120 (173)
T 1alv_A           47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIR  120 (173)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCccCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            356778888899999999999998888753      67888999999999987322211         124567888899


Q ss_pred             hcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          394 IFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       394 ~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      .+| ++        +|.|+.+|+..++..     .+.+..++..+|.|++|.|+.+ |.+++
T Consensus       121 ~~d-d~--------dg~i~~~eF~~~~~~-----~~~~~~~F~~~D~d~~G~i~~~-~~~~l  167 (173)
T 1alv_A          121 RYS-DE--------GGNMDFDNFISCLVR-----LDAMFRAFKSLDKDGTGQIQVN-IQEWL  167 (173)
T ss_dssp             HHT-CS--------SSCBCHHHHHHHHHH-----HHHHHHHHHHHSSSCCSEEEEE-HHHHH
T ss_pred             Hhc-CC--------CCcCcHHHHHHHHHH-----HHHHHHHHHHhCCCCCCeecHh-HHHHH
Confidence            998 88        899999999998875     3678889999999999998855 44444

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=99.00  E-value=6.7e-10  Score=87.13  Aligned_cols=65  Identities=20%  Similarity=0.268  Sum_probs=60.1

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+.++.+|+.||.++        +|+|+.+||..+++.+|. ++++++.++..+|.|+||.|+|+||+.++..
T Consensus        25 ~~~~l~~~F~~~D~d~--------~G~I~~~El~~~l~~~g~-~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~   89 (91)
T 2pmy_A           25 ELARLRSVFAACDANR--------SGRLEREEFRALCTELRV-RPADAEAVFQRLDADRDGAITFQEFARGFLG   89 (91)
T ss_dssp             HHHHHHHHHHHHCTTC--------SSSEEHHHHHHHHHHTTC-CHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred             HHHHHHHHHHHHCCCC--------CCCCcHHHHHHHHHHcCc-CHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence            3567899999999999        999999999999999996 7889999999999999999999999998864

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=99.00  E-value=8.9e-10  Score=92.87  Aligned_cols=65  Identities=23%  Similarity=0.246  Sum_probs=59.8

Q ss_pred             hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       383 ~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ...+.++++|+.|| ++        +|+|+.+|++.+|+.+|. +++++.+|+..+|.|+||.|+|+||+.+|+.
T Consensus        48 ~e~~~l~~~F~~fD-d~--------dG~Is~~El~~~l~~~gl-~~~el~~I~~~~D~d~dG~Ld~~EF~~am~l  112 (139)
T 2jq6_A           48 KDKPTYDEIFYTLS-PV--------NGKITGANAKKEMVKSKL-PNTVLGKIWKLADVDKDGLLDDEEFALANHL  112 (139)
T ss_dssp             GTHHHHHHHHHHSC-CS--------SSEEEHHHHHHHHHHTTC-CHHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhC-CC--------CCeECHHHHHHHHHHhCc-CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            34677999999999 99        999999999999999886 6889999999999999999999999999854

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=98.99  E-value=5e-10  Score=88.09  Aligned_cols=67  Identities=18%  Similarity=0.374  Sum_probs=59.1

Q ss_pred             chhHHHHHHhhcC-CCCccchhccccc-cccHHHHHHHHhh---CCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMISI-YITADELEAAFKE---YNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~g-~i~~~el~~~~~~---~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ....++.+|+.|| +++        +| +|+.+||+.+++.   +|..++++++.++..+|.|+||.|+|+||+.+|...
T Consensus         8 ~~~~l~~~F~~~D~~d~--------dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~   79 (92)
T 2kax_A            8 ALTTMVTTFHKYSGREG--------SKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTML   79 (92)
T ss_dssp             HHHHHHHHHHHHHTTSS--------CSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCC--------CCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            3567899999999 999        99 9999999999987   333477889999999999999999999999998653

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=98.99  E-value=9.1e-10  Score=89.82  Aligned_cols=64  Identities=23%  Similarity=0.264  Sum_probs=57.8

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+.++.+|+.||+|+        +|+|+.+||+.+|+..+. +++++..++..+|.|+||.|+|+||+.+|..
T Consensus        13 ~~~l~~~F~~~D~d~--------dG~I~~~El~~~l~~~~~-~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~   76 (111)
T 2kgr_A           13 RLKYRQLFNSHDKTM--------SGHLTGPQARTILMQSSL-PQAQLASIWNLSDIDQDGKLTAEEFILAMHL   76 (111)
T ss_dssp             HHHHHHHHHTTSCSS--------CCEEEHHHHHHHHHTTCC-CHHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCC--------CCcCcHHHHHHHHHhCCC-CHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence            567889999999999        999999999999994433 7899999999999999999999999998854

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=98.99  E-value=6.4e-10  Score=86.07  Aligned_cols=65  Identities=15%  Similarity=0.123  Sum_probs=60.4

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHH---HHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDAT---IKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~---~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ...++.+|+.||+++        +|+|+.+||..+++.+|.. ++++   +..++..+|.|++|.|+| ||+.++...
T Consensus        13 ~~~l~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~~   81 (86)
T 1j7q_A           13 KDECMKIFDIFDRNA--------ENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSKW   81 (86)
T ss_dssp             HHHHHHHHHHHSTTT--------TSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHHH
Confidence            466889999999999        9999999999999999988 8899   999999999999999999 999998653

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=98.98  E-value=6e-10  Score=89.77  Aligned_cols=66  Identities=17%  Similarity=0.284  Sum_probs=61.1

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ...+..+|+.||+++        +|+|+.+||+.+|+.+|.. +++++..++..+|.|++|.|+|+||+.+|...
T Consensus        23 ~~~l~~~F~~~D~d~--------~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~~   89 (105)
T 1wlz_A           23 YHAITQEFENFDTMK--------TNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSE   89 (105)
T ss_dssp             HHHHHHHHHHHCTTC--------SSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC--
T ss_pred             HHHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcc
Confidence            467899999999999        9999999999999999988 99999999999999999999999999999754

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=98.97  E-value=4.8e-10  Score=86.06  Aligned_cols=66  Identities=26%  Similarity=0.352  Sum_probs=60.0

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCC--CC-ChHHHHH----HHHHHcCCCCCcccHHHHHHHHH
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN--MG-DDATIKE----IMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~--~~-~~~~~~~----~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+.+..+|+.||.++        +|+|+.+||..+++.+|  .. +++++..    ++..+|.|+||.|+|+||+..+.
T Consensus         5 ~~~~l~~~F~~~D~d~--------~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~   76 (83)
T 1yx7_A            5 VKAELEAAFKKLDANG--------DGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANA   76 (83)
T ss_dssp             SCTHHHHHHHHHSSSC--------SSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhH
Confidence            3567899999999999        99999999999999999  66 8888999    99999999999999999998765


Q ss_pred             c
Q 048594          457 T  457 (483)
Q Consensus       457 ~  457 (483)
                      .
T Consensus        77 ~   77 (83)
T 1yx7_A           77 E   77 (83)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=98.96  E-value=7e-10  Score=87.21  Aligned_cols=67  Identities=21%  Similarity=0.419  Sum_probs=61.2

Q ss_pred             chhHHHHHHhhcC-CCCccchhccccc-cccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMISI-YITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~g-~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ..+.++.+|+.|| +++        +| +|+.+||+.+++.     +|.. +++++..++..+|.|++|.|+|+||+.++
T Consensus         7 ~~~~l~~~F~~~D~~d~--------~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~   78 (93)
T 1k2h_A            7 AMETLINVFHAHSGKEG--------DKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLV   78 (93)
T ss_dssp             HHHHHHHHHHHHHTTSS--------CCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCC--------CcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3567899999999 799        99 9999999999998     8877 89999999999999999999999999998


Q ss_pred             HcC
Q 048594          456 KTG  458 (483)
Q Consensus       456 ~~~  458 (483)
                      ...
T Consensus        79 ~~~   81 (93)
T 1k2h_A           79 AAL   81 (93)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=98.95  E-value=1.5e-09  Score=93.38  Aligned_cols=67  Identities=15%  Similarity=0.174  Sum_probs=62.6

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ..+.+..+|+.||+++        +|+|+.+||..+++.+|.. +++++..++..+|.|++|.|+|+||+.++...
T Consensus        46 ~~~~l~~~F~~~D~d~--------dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~  113 (147)
T 1wy9_A           46 KLEAFKVKYMEFDLNG--------NGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK  113 (147)
T ss_dssp             HHHHHHHHHTTSCCCT--------TSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS
T ss_pred             HHHHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            4567899999999999        9999999999999999988 89999999999999999999999999999654

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=98.95  E-value=4.7e-10  Score=88.43  Aligned_cols=66  Identities=14%  Similarity=0.252  Sum_probs=59.7

Q ss_pred             chhHHHHHHhhcCC-CCccchhccccc-cccHHHHHHHH-hhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFTK-PSNILIRIMISI-YITADELEAAF-KEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d~-~~~~~~~~~~~g-~i~~~el~~~~-~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+.++.+|+.||+ ++        +| +|+.+||+.++ +.+|.. ++.++..++..+|.|+||.|+|+||+.++..
T Consensus         8 ~~~~l~~~F~~~D~~d~--------dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~   77 (93)
T 1xk4_A            8 ALNSIIDVYHKYSLIKG--------NFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK   77 (93)
T ss_dssp             HHHHHHHHHHHHHTSSS--------CTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCC--------CcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            35678999999999 99        99 99999999999 788865 6678899999999999999999999998864

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=98.94  E-value=7.2e-10  Score=83.41  Aligned_cols=66  Identities=29%  Similarity=0.493  Sum_probs=59.7

Q ss_pred             chhHHHHHHhhc-CCCCccchhcccc-ccccHHHHHHHHhhCCCC---ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIF-TKPSNILIRIMIS-IYITADELEAAFKEYNMG---DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~-d~~~~~~~~~~~~-g~i~~~el~~~~~~~~~~---~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+.++.+|+.| |+++        + |+|+.+||..+++.+|..   +++++..++..+|.|++|.|+|+||+.++..
T Consensus         3 ~~~~l~~~F~~~~D~d~--------~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~   73 (76)
T 1qx2_A            3 SPEEIKGAFEVFAAKEG--------DPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK   73 (76)
T ss_dssp             CHHHHHHHHHHHHTSSS--------CTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHcccCC--------CcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            356789999999 9999        9 999999999999998743   5678999999999999999999999998864

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=98.93  E-value=3.3e-09  Score=92.97  Aligned_cols=110  Identities=21%  Similarity=0.239  Sum_probs=79.9

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh---------hhchhHHHHHHhh
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL---------VQCKDTSLKDFNI  394 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~---------~~~~~~~~~~F~~  394 (483)
                      .+..+|..+|.|++|.|+.+||..++...      .++..+|+.+|.+++|.+.....         ..+.+.+..+|+.
T Consensus        43 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~  116 (167)
T 1gjy_A           43 TCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKR  116 (167)
T ss_dssp             HHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            45667777888888888888887777653      56777888888888886222111         1235667777877


Q ss_pred             cCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccH--HHHHHH
Q 048594          395 FTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISY--EEFCAT  454 (483)
Q Consensus       395 ~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~--~ef~~~  454 (483)
                      +  ++        +|.|+.+|+..++..+     +.+..++..+|.|++|.|+.  .+|+.+
T Consensus       117 ~--d~--------dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~~G~i~~~~~~~l~~  163 (167)
T 1gjy_A          117 Y--ST--------SGKITFDDYIACCVKL-----RALTDSFRRRDSAQQGMVNFSYDDFIQC  163 (167)
T ss_dssp             T--CB--------TTBEEHHHHHHHHHHH-----HHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred             h--Cc--------CCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCeeEEeeHHHHHHH
Confidence            7  67        7889999999888754     67888888999999998885  455544

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=98.92  E-value=1.9e-09  Score=88.29  Aligned_cols=66  Identities=20%  Similarity=0.365  Sum_probs=58.8

Q ss_pred             hhHHHHHHhhcCC-CCccchhccccc-cccHHHHHHHHh-hCCC------CChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          385 KDTSLKDFNIFTK-PSNILIRIMISI-YITADELEAAFK-EYNM------GDDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       385 ~~~~~~~F~~~d~-~~~~~~~~~~~g-~i~~~el~~~~~-~~~~------~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ...++.+|+.||. ++        +| +|+.+||+.+|+ .+|.      .++++++.+|..+|.|+||.|+|+||+.+|
T Consensus        11 ~~~l~~~F~~fD~~dg--------dG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~   82 (113)
T 1xk4_C           11 IETIINTFHQYSVKLG--------HPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLM   82 (113)
T ss_dssp             HHHHHHHHHHHHTTSS--------STTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCC--------CCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHH
Confidence            4678999999995 99        99 999999999999 7773      267899999999999999999999999998


Q ss_pred             HcC
Q 048594          456 KTG  458 (483)
Q Consensus       456 ~~~  458 (483)
                      ...
T Consensus        83 ~~~   85 (113)
T 1xk4_C           83 ARL   85 (113)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=98.92  E-value=1e-09  Score=87.62  Aligned_cols=61  Identities=28%  Similarity=0.595  Sum_probs=50.9

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ..++++++.+++++|+.+|.|++|+|+.+||+.+|+.+|..+++++++++++.+|.|++|.
T Consensus        28 ~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~   88 (100)
T 2lv7_A           28 VDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQ   88 (100)
T ss_dssp             CCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSS
T ss_pred             ccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCe
Confidence            3567888999999999999999999999999999999999988876766666655544443

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=98.92  E-value=7.9e-10  Score=87.68  Aligned_cols=66  Identities=20%  Similarity=0.429  Sum_probs=57.7

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+.++.+|+.||. +        +|+|+.+||+.+++.     +|.. +++++++++..+|.|+||.|+|+||+.+|..
T Consensus         7 ~~~~l~~~F~~fD~-~--------dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~   77 (96)
T 1a4p_A            7 AMETMMFTFHKFAG-D--------KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG   77 (96)
T ss_dssp             HHHHHHHHHHHHHG-G--------GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcC-C--------CCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            35678999999994 6        789999999999986     4544 7889999999999999999999999999865


Q ss_pred             C
Q 048594          458 G  458 (483)
Q Consensus       458 ~  458 (483)
                      .
T Consensus        78 ~   78 (96)
T 1a4p_A           78 L   78 (96)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=98.92  E-value=3.4e-09  Score=92.63  Aligned_cols=110  Identities=16%  Similarity=0.231  Sum_probs=76.1

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh---------hhchhHHHHHHhh
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL---------VQCKDTSLKDFNI  394 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~---------~~~~~~~~~~F~~  394 (483)
                      .+..+|..+|.|++|.|+.+||..++...      .++..+|+.+|.+++|.+.....         ..+.+.+..+|+.
T Consensus        41 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~  114 (165)
T 1k94_A           41 TCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR  114 (165)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            45667777777777777777777776653      56777777777777776222111         1234566777777


Q ss_pred             cCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          395 FTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       395 ~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      +  ++        +|.|+.+|+..++...     +++.+++..+|.|++|.|+.+ |.++|
T Consensus       115 ~--d~--------dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~~G~i~~~-~~~~l  159 (165)
T 1k94_A          115 Y--SK--------NGRIFFDDYVACCVKL-----RALTDFFRKRDHLQQGSANFI-YDDFL  159 (165)
T ss_dssp             H--CB--------TTBCBHHHHHHHHHHH-----HHHHHHHHTTCTTCCSEEEEE-HHHHH
T ss_pred             h--CC--------CCeEcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCeEeee-HHHHH
Confidence            7  66        7888888888888754     677788888888888888655 55444

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=98.91  E-value=1e-09  Score=85.54  Aligned_cols=66  Identities=18%  Similarity=0.386  Sum_probs=60.3

Q ss_pred             chhHHHHHHhhcC-CCCccchhccccc-cccHHHHHHHHhh---CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMISI-YITADELEAAFKE---YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~g-~i~~~el~~~~~~---~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+.++.+|+.|| +++        +| +|+.+||+.+++.   +|.. +++++..++..+|.|+||.|+|+||+.++..
T Consensus         8 ~~~~l~~~F~~~D~~d~--------~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~   79 (90)
T 1k8u_A            8 AIGLLVAIFHKYSGREG--------DKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA   79 (90)
T ss_dssp             HHHHHHHHHHHHHTSSS--------CTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCC--------CCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            3467899999999 699        99 9999999999998   8877 8899999999999999999999999998864

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=98.91  E-value=5.2e-10  Score=86.73  Aligned_cols=62  Identities=32%  Similarity=0.398  Sum_probs=57.8

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ..+..+|+.||+++        +|+|+.+||+.+++.+|.. +++++..++..+|.|++|.|+|+||+.++
T Consensus        23 ~~~~~~F~~~D~d~--------~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~   85 (87)
T 1s6j_A           23 GGLKELFKMIDTDN--------SGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             TTTTTHHHHHCTTC--------SSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            35678999999999        9999999999999999988 99999999999999999999999998754

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=98.90  E-value=5.4e-09  Score=94.42  Aligned_cols=111  Identities=19%  Similarity=0.240  Sum_probs=74.8

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh---------hhchhHHHHHHhh
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL---------VQCKDTSLKDFNI  394 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~---------~~~~~~~~~~F~~  394 (483)
                      .+..+|..+|.|++|.|+.+||..++..+      +++..+|+.+|.+++|.+.....         ..+.+.+..+|+.
T Consensus        74 ~~~~l~~~~D~d~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~  147 (198)
T 1juo_A           74 TCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKR  147 (198)
T ss_dssp             HHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCeECHHHHHHHHHHH------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            45566666777777777777777666643      45666777777777775222111         1234566677777


Q ss_pred             cCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccH--HHHHHHH
Q 048594          395 FTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISY--EEFCATM  455 (483)
Q Consensus       395 ~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~--~ef~~~~  455 (483)
                      +  ++        +|.|+.+|+..++..+     +++..+|..+|.|++|.|+.  ++|+.++
T Consensus       148 ~--d~--------dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~~G~is~~~~~~l~~~  195 (198)
T 1juo_A          148 Y--ST--------NGKITFDDYIACCVKL-----RALTDSFRRRDTAQQGVVNFPYDDFIQCV  195 (198)
T ss_dssp             T--CS--------SSSEEHHHHHHHHHHH-----HHHHHHHHHTCTTCCSEEEEEHHHHHHHH
T ss_pred             h--CC--------CCeEcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCeEeecHHHHHHHH
Confidence            7  66        7888888888888753     57788888888888888876  6666554

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=98.89  E-value=6.4e-10  Score=88.93  Aligned_cols=66  Identities=17%  Similarity=0.255  Sum_probs=57.3

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhh-----CCC--C-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE-----YNM--G-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~-----~~~--~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ..+.++++|+.||.+         +|+|+.+||+.+++.     +|.  . ++++++++|.++|.|+||.|+|+||+.+|
T Consensus         8 ~~~~l~~~F~~fD~~---------~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~   78 (100)
T 1psr_A            8 SIIGMIDMFHKYTRR---------DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLL   78 (100)
T ss_dssp             HHHHHHHHHHHTCCT---------TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC---------CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            356789999999964         489999999999987     454  3 77899999999999999999999999998


Q ss_pred             HcC
Q 048594          456 KTG  458 (483)
Q Consensus       456 ~~~  458 (483)
                      ...
T Consensus        79 ~~~   81 (100)
T 1psr_A           79 GDI   81 (100)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=98.89  E-value=1.8e-09  Score=95.96  Aligned_cols=108  Identities=14%  Similarity=0.133  Sum_probs=86.4

Q ss_pred             cCHHHHHHHHHhcCCCCCHHHHHHHHHhccC-CCCCceeechh----------hhchhHHHHHHhhcCCCCccchhcccc
Q 048594          340 LTYDEFKAGLSKLGSTLTEVDVKQYMQAADI-DGNGTTLNLSL----------VQCKDTSLKDFNIFTKPSNILIRIMIS  408 (483)
Q Consensus       340 l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~-~~~g~~~~~~~----------~~~~~~~~~~F~~~d~~~~~~~~~~~~  408 (483)
                      |+.+|+..+++..+  ++.+++.++++.+|. +++|.+.....          ......+..+|+.+|.++        +
T Consensus         1 l~~~el~~l~~~~~--~s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~--------~   70 (183)
T 1s6c_A            1 HRPEGLEQLEAQTN--FTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQ--------T   70 (183)
T ss_dssp             -----CHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTC--------S
T ss_pred             CChHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCC--------C
Confidence            46778888888765  588899999999988 88887322211          134667889999999999        9


Q ss_pred             ccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          409 IYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       409 g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      |.|+.+|+..++..++.. .++++..+|..+|.|++|.|+++||..++..
T Consensus        71 g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~  120 (183)
T 1s6c_A           71 GSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA  120 (183)
T ss_dssp             SCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             CcEeHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            999999999999987655 6788999999999999999999999999875

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=98.87  E-value=4.6e-09  Score=95.45  Aligned_cols=115  Identities=14%  Similarity=0.083  Sum_probs=82.7

Q ss_pred             CCCCCCcCHHHHHHHHHhcCCCCCH-HHHHHHHHhccCC--CCCceeechhh--------hchhHHHHHHhhcCCCCccc
Q 048594          334 TNDSGTLTYDEFKAGLSKLGSTLTE-VDVKQYMQAADID--GNGTTLNLSLV--------QCKDTSLKDFNIFTKPSNIL  402 (483)
Q Consensus       334 ~d~~G~l~~~el~~~l~~~~~~~~~-~~~~~l~~~~d~~--~~g~~~~~~~~--------~~~~~~~~~F~~~d~~~~~~  402 (483)
                      +|++|.|+.+|+..+.+..+....+ .++..+|..+|.+  ++|.+......        .....+..+|+.+|.++   
T Consensus        11 ~~~~g~l~~~el~~l~~~~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~f~~~D~d~---   87 (207)
T 2ehb_A           11 KNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKR---   87 (207)
T ss_dssp             ----------CHHHHHHHSSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHSCTTCCCHHHHHHHHHHCTTC---
T ss_pred             hccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhccccccHHHHHHHHHHhcCCC---
Confidence            4688999999999998877643322 2366789999999  99983332211        11234677999999999   


Q ss_pred             hhccccccccHHHHHHHHhhCCCC--ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          403 IRIMISIYITADELEAAFKEYNMG--DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       403 ~~~~~~g~i~~~el~~~~~~~~~~--~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                           +|.|+.+|+..++..++..  ..+.+..+|..+|.|++|.|+++||..+++
T Consensus        88 -----~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~  138 (207)
T 2ehb_A           88 -----NGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVV  138 (207)
T ss_dssp             -----SSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred             -----CCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence                 9999999999999988643  467799999999999999999999999985

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=98.87  E-value=4.2e-09  Score=94.17  Aligned_cols=112  Identities=20%  Similarity=0.169  Sum_probs=93.7

Q ss_pred             CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCC-CCCceeechh----------hhchhHHHHHHhhcCCCCccchh
Q 048594          336 DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADID-GNGTTLNLSL----------VQCKDTSLKDFNIFTKPSNILIR  404 (483)
Q Consensus       336 ~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~-~~g~~~~~~~----------~~~~~~~~~~F~~~d~~~~~~~~  404 (483)
                      ..+.++.+++..+.+..  .++.+++..+|+.+|.+ ++|.+.....          ......+..+|+.+|.++     
T Consensus         4 ~~~~l~~~~l~~l~~~~--~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~-----   76 (190)
T 1g8i_A            4 SNSKLKPEVVEELTRKT--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENK-----   76 (190)
T ss_dssp             CCCSCCHHHHHHHHHTS--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTC-----
T ss_pred             ccccCCHHHHHHHHHcc--CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCC-----
Confidence            45689999999988866  46889999999999988 7887322211          123456889999999999     


Q ss_pred             ccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          405 IMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       405 ~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                         +|.|+.+|+..++..++.. +++++..+|..+|.|++|.|+++||..++..
T Consensus        77 ---~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~  127 (190)
T 1g8i_A           77 ---DGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA  127 (190)
T ss_dssp             ---SSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             ---CCeEeHHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHH
Confidence               9999999999999988655 6788999999999999999999999999876

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=98.87  E-value=1.7e-08  Score=91.07  Aligned_cols=122  Identities=16%  Similarity=0.266  Sum_probs=93.1

Q ss_pred             hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh----------------h
Q 048594          319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL----------------V  382 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~----------------~  382 (483)
                      ......+..+|..+|.|++|.|+.+||..++..++...+.+++..+|..+|.+++|.+....+                .
T Consensus        48 ~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~  127 (198)
T 2r2i_A           48 PSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAM  127 (198)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCC
T ss_pred             cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchh
Confidence            344456889999999999999999999999999988888999999999999999998322211                1


Q ss_pred             hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCC
Q 048594          383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTH  460 (483)
Q Consensus       383 ~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~  460 (483)
                      ...+.+..+|+.+|.|+        +|+|+.+|+..++.     ..+++.+++..       .++...++..+.....
T Consensus       128 ~~~~~~~~~f~~~D~d~--------dG~I~~~Ef~~~~~-----~~~~~~~~~~~-------~~~~~~~~~~~~~~~~  185 (198)
T 2r2i_A          128 TAEEFTNMVFDKIDING--------DGELSLEEFMEGVQ-----KDEVLLDILTR-------SLDLTHIVKLIQNDGK  185 (198)
T ss_dssp             CHHHHHHHHHHHHCTTC--------SSEECHHHHHHHHT-----TCHHHHHHHHS-------TTCHHHHHHHHTTCC-
T ss_pred             hHHHHHHHHHHHhCCCC--------CCcCcHHHHHHHHH-----cCHHHHHHHhc-------cccchhhHHHHhccCC
Confidence            12345889999999999        99999999999986     34566676653       1224455555544433

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=98.86  E-value=2.3e-09  Score=99.11  Aligned_cols=112  Identities=13%  Similarity=0.119  Sum_probs=88.0

Q ss_pred             CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCC-CCCceeechh----------hhchhHHHHHHhhcCCCCccchh
Q 048594          336 DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADID-GNGTTLNLSL----------VQCKDTSLKDFNIFTKPSNILIR  404 (483)
Q Consensus       336 ~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~-~~g~~~~~~~----------~~~~~~~~~~F~~~d~~~~~~~~  404 (483)
                      ..+.|+.+++..+++..+  +++++++.+++.+|.+ ++|.+.....          ......+..+|+.+|.++     
T Consensus        30 ~~~~l~~~~l~~l~~~~~--~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~-----  102 (224)
T 1s1e_A           30 TMVCHRPEGLEQLEAQTN--FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQ-----  102 (224)
T ss_dssp             --------CHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTC-----
T ss_pred             CccCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCC-----
Confidence            457899999999999876  7899999999999884 8887322111          134567889999999999     


Q ss_pred             ccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          405 IMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       405 ~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                         +|.|+.+|+..++..++.. .++++..+|..+|.|++|.|+++||..++..
T Consensus       103 ---~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~  153 (224)
T 1s1e_A          103 ---TGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA  153 (224)
T ss_dssp             ---SSCBCHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHH
T ss_pred             ---CCcEeHHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHH
Confidence               9999999999999887655 6788999999999999999999999999875

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=98.86  E-value=3.8e-09  Score=90.77  Aligned_cols=81  Identities=16%  Similarity=0.298  Sum_probs=70.5

Q ss_pred             hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhh----chhHHHHHHhh
Q 048594          319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ----CKDTSLKDFNI  394 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~----~~~~~~~~F~~  394 (483)
                      .+++..++++|..+|.|++|+|+.+||..+++.+|..+++.+++.++..+|.+++|.+....+..    ..+.+..+|+.
T Consensus        44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~aF~~  123 (147)
T 1wy9_A           44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGKRSAILRMILM  123 (147)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSSGGGGGGGGGG
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhHHHHHHHHHH
Confidence            57788999999999999999999999999999999999999999999999999999844443322    25678899999


Q ss_pred             cCCCC
Q 048594          395 FTKPS  399 (483)
Q Consensus       395 ~d~~~  399 (483)
                      ||.++
T Consensus       124 ~D~d~  128 (147)
T 1wy9_A          124 YEEKN  128 (147)
T ss_dssp             CCCC-
T ss_pred             HccCC
Confidence            99999

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=98.86  E-value=9.2e-09  Score=95.76  Aligned_cols=98  Identities=14%  Similarity=0.159  Sum_probs=80.7

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccchh
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIR  404 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~~~  404 (483)
                      +.-+|+.||.|++|+|+..||+.+|..+..                   |+        .+++++-+|++|| |+     
T Consensus       134 a~~lf~~FD~~~~G~I~f~ef~~aLs~l~r-------------------G~--------leeKL~w~F~lyD-D~-----  180 (261)
T 1eg3_A          134 LNWLLNVYDTGRTGRIRVLSFKTGIISLCK-------------------AH--------LEDKYRYLFKQVA-SS-----  180 (261)
T ss_dssp             HHHHHHHHCTTCCSEEEHHHHHHHHHHTSS-------------------SC--------HHHHHHHHHHHHS-CT-----
T ss_pred             HHHHHHHccCCCCceEeHHHHHHHHHHHcC-------------------CC--------HHHHHHHHHheee-CC-----
Confidence            445899999999999999999999998631                   11        3578999999999 99     


Q ss_pred             ccccccccHHHHHHHHhh-------CC------CC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCC
Q 048594          405 IMISIYITADELEAAFKE-------YN------MG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTH  460 (483)
Q Consensus       405 ~~~~g~i~~~el~~~~~~-------~~------~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~  460 (483)
                         +|+|+.+||..+++.       +|      .. .++.++.+|..+|  +||.|+.+||++.+.....
T Consensus       181 ---~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It~~EFl~~~~~dp~  245 (261)
T 1eg3_A          181 ---TGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEAALFLDWMRLEPQ  245 (261)
T ss_dssp             ---TSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCHHHHHHHHHTCCT
T ss_pred             ---CCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCCHHHHHHHHHhCcH
Confidence               899999999998865       23      22 4667888999886  8899999999999887653

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=98.85  E-value=1.8e-09  Score=81.59  Aligned_cols=66  Identities=20%  Similarity=0.375  Sum_probs=59.1

Q ss_pred             chhHHHHHHhhcCC-CCccchhccccc-cccHHHHHHHHhh-CCCC--ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFTK-PSNILIRIMISI-YITADELEAAFKE-YNMG--DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d~-~~~~~~~~~~~g-~i~~~el~~~~~~-~~~~--~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+.++.+|+.||. ++        +| +|+.+||+.+++. +|..  +++++..++..+|.|++|.|+|+||+.++..
T Consensus         5 ~~~~l~~~F~~~D~~d~--------~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~   75 (78)
T 1cb1_A            5 SPAELKSIFEKYAAKEG--------DPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK   75 (78)
T ss_dssp             CHHHHHHHHHHHHTTSS--------STTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCC--------CcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            35678999999999 99        99 9999999999986 7743  6788999999999999999999999998864

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=98.84  E-value=4.3e-09  Score=90.74  Aligned_cols=81  Identities=21%  Similarity=0.308  Sum_probs=66.4

Q ss_pred             hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhh----chhHHHHHHhh
Q 048594          319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ----CKDTSLKDFNI  394 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~----~~~~~~~~F~~  394 (483)
                      .++...++++|+.+|.|++|+|+.+||..+++.+|..+++++++.++..+|.+++|.+....+..    ....+..+|+.
T Consensus        46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~i~~aF~~  125 (150)
T 2jjz_A           46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVLKLVMM  125 (150)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSSSCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHhHHHHHHHHHH
Confidence            46678899999999999999999999999999999999999999999999999999854443332    25679999999


Q ss_pred             cCCCC
Q 048594          395 FTKPS  399 (483)
Q Consensus       395 ~d~~~  399 (483)
                      ||.++
T Consensus       126 ~D~d~  130 (150)
T 2jjz_A          126 FEGKA  130 (150)
T ss_dssp             -----
T ss_pred             HcCCC
Confidence            99999

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=98.82  E-value=4.4e-09  Score=83.61  Aligned_cols=66  Identities=20%  Similarity=0.378  Sum_probs=58.7

Q ss_pred             chhHHHHHHhhcC-CCCccchhccccc-cccHHHHHHHHh-hCC----CC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMISI-YITADELEAAFK-EYN----MG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~g-~i~~~el~~~~~-~~~----~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ..+.+..+|+.|| +++        +| +|+.+||+.+++ .++    .. ++++++.++..+|.|+||.|+|+||+.++
T Consensus        11 ~~~~l~~~F~~~Dd~d~--------~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~   82 (99)
T 1qls_A           11 CIESLIAIFQKHAGRDG--------NNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLI   82 (99)
T ss_dssp             HHHHHHHHHHHHHTTSS--------CTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCC--------CcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3567899999998 999        99 999999999999 453    44 78899999999999999999999999988


Q ss_pred             Hc
Q 048594          456 KT  457 (483)
Q Consensus       456 ~~  457 (483)
                      ..
T Consensus        83 ~~   84 (99)
T 1qls_A           83 GG   84 (99)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=98.82  E-value=5.6e-09  Score=103.04  Aligned_cols=63  Identities=29%  Similarity=0.478  Sum_probs=35.7

Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +++++|+.||+|+        +|+|+.+||+.+|+.+|.. +++++++++..+|.|++|.|+|+||+.++..
T Consensus       303 ELREaF~~fDkDg--------dG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~  366 (440)
T 3u0k_A          303 EFKEAFSLFDKDG--------DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMAR  366 (440)
T ss_dssp             HHHHHHHHHCTTC--------SSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCC--------CCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            3455555555555        5555555555555555555 5555555555555555555555555555543

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=98.79  E-value=6.7e-09  Score=88.52  Aligned_cols=61  Identities=21%  Similarity=0.487  Sum_probs=33.6

Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      +++.+|+.||+|+        +|+|+.+||..+|+.+|.. +++++..++..+|.|++|.|+|+||+.+|
T Consensus         7 ~l~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~   68 (143)
T 2obh_A            7 EIREAFDLFDADG--------TGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVM   68 (143)
T ss_dssp             HHHHHHHTTCTTC--------CSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHH
T ss_pred             HHHHHHHHhCCCC--------CCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHH
Confidence            4455555555555        5555555555555555544 55555555555555555555555555544

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=98.78  E-value=1.1e-08  Score=110.33  Aligned_cols=137  Identities=10%  Similarity=0.087  Sum_probs=106.2

Q ss_pred             hcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhc-------cCCCCCceeechh------hhchhHHHHHHhhcCC
Q 048594          331 QMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAA-------DIDGNGTTLNLSL------VQCKDTSLKDFNIFTK  397 (483)
Q Consensus       331 ~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~-------d~~~~g~~~~~~~------~~~~~~~~~~F~~~d~  397 (483)
                      .+|.|++|.|+.+|+..+++..+.  ...++.++++..       |.+++|.+.+.++      +...++++.+|+.||.
T Consensus       163 ~fd~n~dG~Is~kEl~~~l~~~~~--~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~R~EI~eiF~~y~~  240 (816)
T 3qr0_A          163 TTVEMEKNKIPVKAIQKCLSKDKD--DRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLERSEIEGIFKELSK  240 (816)
T ss_dssp             HHTSCCSSEEEHHHHHHHHCSCHH--HHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCCCTHHHHHHHHHTT
T ss_pred             hccCCCCCCCCHHHHHHHHHhcCC--hHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCCHHHHHHHHHHHcc
Confidence            379999999999999999886532  245688999988       4555665333222      2346789999999999


Q ss_pred             CCccchhccccccccHHHHHHHHhhCCCC-----------ChHHHHHHHHHHcC--C----CCCcccHHHHHHHHHcCCC
Q 048594          398 PSNILIRIMISIYITADELEAAFKEYNMG-----------DDATIKEIMFEVDR--D----KDGRISYEEFCATMKTGTH  460 (483)
Q Consensus       398 ~~~~~~~~~~~g~i~~~el~~~~~~~~~~-----------~~~~~~~~~~~~d~--~----~~g~i~~~ef~~~~~~~~~  460 (483)
                      ++        +|+|+. ||.++|+..+..           +++++.+|+.+++.  +    ++|.|++++|..+|....+
T Consensus       241 dg--------~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S~~~  311 (816)
T 3qr0_A          241 NK--------GNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCEEN  311 (816)
T ss_dssp             TS--------SSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHSGGG
T ss_pred             CC--------CCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhcccc
Confidence            99        899999 999999998622           47889999998876  5    7899999999999986643


Q ss_pred             C---------CccccccccchhccCCc
Q 048594          461 L---------RGTSYRNLSHIFIGKGK  478 (483)
Q Consensus       461 ~---------~~~~~~~~~~~~~~~~~  478 (483)
                      .         .+.-.+-|+|-||.++-
T Consensus       312 ~~~~~~~~~v~~dm~~Pl~~YfI~ssh  338 (816)
T 3qr0_A          312 NLTPMHRLDLGANMKLTLAAYYINSSH  338 (816)
T ss_dssp             CSSCHHHHSSCSCCCSCGGGEEECBBS
T ss_pred             cccchhhcccccccCCchhhheecccc
Confidence            2         24555778999998763

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=98.76  E-value=1.5e-08  Score=81.38  Aligned_cols=64  Identities=25%  Similarity=0.341  Sum_probs=55.7

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhh-----CCCC-Ch-----------HHHHHHHHHHcCCCCCcccH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE-----YNMG-DD-----------ATIKEIMFEVDRDKDGRISY  448 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~-----~~~~-~~-----------~~~~~~~~~~d~~~~g~i~~  448 (483)
                      ..++.+|+.||+|+        +|+|+.+||..+++.     +|.. +.           ..+..++..+|.|+||.|+|
T Consensus        20 ~~~~~~F~~~D~d~--------dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~   91 (103)
T 1snl_A           20 FNPKTFFILHDINS--------DGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTL   91 (103)
T ss_dssp             CCHHHHHHHHCSSC--------CSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEH
T ss_pred             CCHHHHHHHHcCCC--------CCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCH
Confidence            45889999999999        999999999999996     5654 32           24888999999999999999


Q ss_pred             HHHHHHHHc
Q 048594          449 EEFCATMKT  457 (483)
Q Consensus       449 ~ef~~~~~~  457 (483)
                      +||+.++..
T Consensus        92 ~EF~~~~~~  100 (103)
T 1snl_A           92 EEFLASTQR  100 (103)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhc
Confidence            999999865

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.75  E-value=2.3e-08  Score=94.44  Aligned_cols=110  Identities=13%  Similarity=0.112  Sum_probs=84.3

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCC---CC----------------------------CcCeEEEec
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS---KS----------------------------DEGYLKREH   97 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~----------------------------~~~~lv~E~   97 (483)
                      ..|.+...++.|+.+.||++...  +..+++|+.....   ..                            ...|+|||+
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~   91 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE   91 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred             ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence            45889999999999999999754  6899999987521   00                            001899999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------------
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-------------------------------------------  134 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~-------------------------------------------  134 (483)
                      ++|.+|.+.+.     +......++.++..+|..||+                                           
T Consensus        92 i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (263)
T 3tm0_A           92 ADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD  166 (263)
T ss_dssp             CSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred             cCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence            99998877631     122345788899999999999                                           


Q ss_pred             ----------------CCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594          135 ----------------NGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus       135 ----------------~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                                      ..++|+|++|.||++.   ....+.|+||+.+..
T Consensus       167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVK---DGKVSGFIDLGRSGR  213 (263)
T ss_dssp             HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEE---TTEEEEECCCTTCEE
T ss_pred             HHHHHHHHHhcCCCCCceEECCCCCcCcEEEE---CCcEEEEEEchhccc
Confidence                            4489999999999994   334567999998754

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=98.75  E-value=1.4e-08  Score=78.29  Aligned_cols=61  Identities=30%  Similarity=0.544  Sum_probs=51.8

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      +..+++++...++++|..+|.|++|+|+.+||..+++.+| .++.++++.++..+|.+++|.
T Consensus         2 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~   62 (86)
T 2opo_A            2 AAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGF   62 (86)
T ss_dssp             ----CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSE
T ss_pred             CccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCc
Confidence            3456788889999999999999999999999999999999 888888888888877777776

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=98.73  E-value=5.8e-08  Score=75.84  Aligned_cols=58  Identities=31%  Similarity=0.591  Sum_probs=50.6

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      +.+....++++|..+|.|++|+|+.+||..+++.+|..++.++++.++..+|.+++|.
T Consensus         4 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~   61 (92)
T 2kn2_A            4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ   61 (92)
T ss_dssp             CCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSS
T ss_pred             CccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence            4566778999999999999999999999999999999999888888877777766665

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=98.72  E-value=9.7e-09  Score=91.09  Aligned_cols=80  Identities=24%  Similarity=0.400  Sum_probs=61.0

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCCCCc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRG  463 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~  463 (483)
                      ..+++++|+.||+|+        +|+|+.+||..+|+.+|.. ++.++..++..+|.+++|.|+|+||+.++..... ..
T Consensus        10 i~elk~~F~~~D~d~--------dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~-~~   80 (176)
T 2lhi_A           10 IAEFKEAFALFDKDN--------NGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLK-SN   80 (176)
T ss_dssp             GGHHHHHHHTTCSSC--------SSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCC-SS
T ss_pred             HHHHHHHHHHHCCCC--------CCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcc-cC
Confidence            356788888888888        8888888888888888887 8888888888888888888888888888765443 23


Q ss_pred             cccccccchh
Q 048594          464 TSYRNLSHIF  473 (483)
Q Consensus       464 ~~~~~~~~~~  473 (483)
                      .+.+.+..+|
T Consensus        81 ~~~~~l~~aF   90 (176)
T 2lhi_A           81 DSEQELLEAF   90 (176)
T ss_dssp             HHHHHHHHHH
T ss_pred             CcHHHHHHHH
Confidence            3344454444

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=98.72  E-value=2.8e-08  Score=81.10  Aligned_cols=62  Identities=24%  Similarity=0.368  Sum_probs=57.2

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..++.++|+.+|+ +        +|+|+.+|++.+|...|. +++++.+|....|.|+||.|+|+||+..|.
T Consensus        32 ~~~y~~iF~~lD~-~--------dG~Isg~elr~~~~~sgL-p~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~   93 (121)
T 3fia_A           32 RAKHDQQFHSLKP-I--------SGFITGDQARNFFFQSGL-PQPVLAQIWALADMNNDGRMDQVEFSIAMK   93 (121)
T ss_dssp             HHHHHHHHHHTCC-B--------TTBEEHHHHHHHHGGGCC-CHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC-C--------CCeECHHHHHHHHHHcCC-CHHHHHHHHHHHcCCCCCcCCHHHHHHHHH
Confidence            4668899999998 7        899999999999999988 688999999999999999999999998874

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=98.71  E-value=1.6e-08  Score=83.17  Aligned_cols=102  Identities=20%  Similarity=0.285  Sum_probs=65.8

Q ss_pred             hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHh-----cCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHH----
Q 048594          319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSK-----LGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSL----  389 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~-----~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~----  389 (483)
                      +..+..+.++|+.+|.| +|+||.+||+.+|+.     +|..+++++++++++.+|.|+||.+.+.+++.--..+.    
T Consensus        11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~~~h   89 (121)
T 4drw_A           11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIACN   89 (121)
T ss_dssp             HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHH
Confidence            44577899999999988 899999999999987     67778888888888888887777755555443322222    


Q ss_pred             HHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCC
Q 048594          390 KDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKD  443 (483)
Q Consensus       390 ~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~  443 (483)
                      +.|....+..        +++.              .++..+.+++.++|.|+|
T Consensus        90 e~f~~~~k~~--------~~~~--------------~~d~~~~e~~~~~d~~gd  121 (121)
T 4drw_A           90 DYFVVHMKQE--------NLYF--------------QGDSTVHEILSKLSLEGD  121 (121)
T ss_dssp             HHHTTSCC-------------------------------CCHHHHHHHCCC---
T ss_pred             HHHHHHHHHh--------ccCC--------------CCchHHHHHHHHhcccCC
Confidence            2333333322        1111              145667888888887765

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=98.69  E-value=1.8e-08  Score=91.02  Aligned_cols=107  Identities=18%  Similarity=0.191  Sum_probs=85.9

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeech----------------hhhchh
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLS----------------LVQCKD  386 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~----------------~~~~~~  386 (483)
                      ..+..+|..+|.|++|.|+.+||..++.........+.+..+|+.+|.+++|.+....                .....+
T Consensus        73 ~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~  152 (204)
T 3e3r_A           73 AEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDE  152 (204)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHH
T ss_pred             HHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHH
Confidence            3577889999999999999999999988766555667899999999999999822211                112346


Q ss_pred             HHHHHHhhcCC-CCccchhccccccccHHHHHHHHhhCCCC--ChHHHHHHHHH
Q 048594          387 TSLKDFNIFTK-PSNILIRIMISIYITADELEAAFKEYNMG--DDATIKEIMFE  437 (483)
Q Consensus       387 ~~~~~F~~~d~-~~~~~~~~~~~g~i~~~el~~~~~~~~~~--~~~~~~~~~~~  437 (483)
                      .+..+|+.+|. |+        +|.|+.+|+..++..++..  ++++++.+++.
T Consensus       153 ~~~~~~~~~D~~d~--------dg~Is~~EF~~~~~~~~~~~~~d~~f~~~~~~  198 (204)
T 3e3r_A          153 VLRRFLDNFDSSEK--------DGQVTLAEFQDYYSGVSASMNTDEEFVAMMTS  198 (204)
T ss_dssp             HHHHHHHHHSCSSC--------CSCEEHHHHHHHHHHHHHHCSSHHHHHHHHHH
T ss_pred             HHHHHHHHhhccCC--------CCcCcHHHHHHHHHHcCccCCChHHHHHHHHH
Confidence            68899999998 99        9999999999999998732  67777777754

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=98.69  E-value=1.9e-08  Score=94.88  Aligned_cols=111  Identities=16%  Similarity=0.125  Sum_probs=86.0

Q ss_pred             CCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCC-CCCceeechh----------hhchhHHHHHHhhcCCCCccchhc
Q 048594          337 SGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADID-GNGTTLNLSL----------VQCKDTSLKDFNIFTKPSNILIRI  405 (483)
Q Consensus       337 ~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~-~~g~~~~~~~----------~~~~~~~~~~F~~~d~~~~~~~~~  405 (483)
                      .+.++.+++..+++..+  ++++++..++..+|.+ ++|.+.....          ......+..+|+.+|.++      
T Consensus        71 ~~~l~~e~l~~l~~~~~--~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~------  142 (256)
T 2jul_A           71 TVRHQPEGLDQLQAQTK--FTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADG------  142 (256)
T ss_dssp             -----CTHHHHHHHHTT--SCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSC------
T ss_pred             cccCCHHHHHHHHHHhC--CCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCC------
Confidence            34577777877777654  6788888888888765 6776322221          123456889999999999      


Q ss_pred             cccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          406 MISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       406 ~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                        +|.|+.+|+..++..++.. .++++..+|..+|.|++|.|+++||..++..
T Consensus       143 --dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~  193 (256)
T 2jul_A          143 --NGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKS  193 (256)
T ss_dssp             --CSEECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHH
T ss_pred             --CCcCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence              9999999999999988766 7888999999999999999999999999875

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=98.69  E-value=3.2e-08  Score=89.64  Aligned_cols=95  Identities=16%  Similarity=0.157  Sum_probs=80.3

Q ss_pred             CCCHHHHHHHHHhccCC-CCCceeechh---------hhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCC
Q 048594          355 TLTEVDVKQYMQAADID-GNGTTLNLSL---------VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN  424 (483)
Q Consensus       355 ~~~~~~~~~l~~~~d~~-~~g~~~~~~~---------~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~  424 (483)
                      .++.++++++|..+|.+ ++|.+.....         ....+.+..+|+.+|.++        +|.|+.+|+..++..++
T Consensus        18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~--------~G~i~~~Ef~~~~~~~~   89 (204)
T 1jba_A           18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNG--------DNTIDFLEYVAALNLVL   89 (204)
T ss_dssp             HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSS--------SSEECHHHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCC--------CCeEeHHHHHHHHHHHc
Confidence            45778899999999998 8997322221         123567889999999999        99999999999999887


Q ss_pred             CC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          425 MG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       425 ~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .. +.+++..+|..+|.|++|.|+++||..++..
T Consensus        90 ~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~  123 (204)
T 1jba_A           90 RGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVES  123 (204)
T ss_dssp             SCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            66 7889999999999999999999999999865

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=98.69  E-value=3e-08  Score=83.88  Aligned_cols=90  Identities=12%  Similarity=0.112  Sum_probs=46.9

Q ss_pred             HHHHHHHhccCCCCCceeechhhhchh---------HHHHHHhhcCCCCccchhccccccccHHHHHHHHhh-CCCC-Ch
Q 048594          360 DVKQYMQAADIDGNGTTLNLSLVQCKD---------TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE-YNMG-DD  428 (483)
Q Consensus       360 ~~~~l~~~~d~~~~g~~~~~~~~~~~~---------~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~-~~~~-~~  428 (483)
                      ++..+|..+|.+++|.+........-.         .+..+|+.+|.++        +|.|+.+|+..++.. +... ..
T Consensus         7 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~--------~g~i~~~eF~~~~~~~~~~~~~~   78 (142)
T 2bl0_C            7 EFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATG--------NGKIQFPEFLSMMGRRMKQTTSE   78 (142)
T ss_dssp             HHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTC--------SSEEEHHHHHHHHHHHHTTCCCH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCC--------CCeeeHHHHHHHHHHHhcCCChH
Confidence            355556666666666533222221111         1344566666666        566666666665554 2222 45


Q ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          429 ATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       429 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +.+..+|..+|.|++|.|+.+||..+++.
T Consensus        79 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~  107 (142)
T 2bl0_C           79 DILRQAFRTFDPEGTGYIPKAALQDALLN  107 (142)
T ss_dssp             HHHHHHHHHTCCSSCSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            55556666666666666666666666544

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=98.68  E-value=3.7e-08  Score=74.04  Aligned_cols=54  Identities=30%  Similarity=0.533  Sum_probs=44.6

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCC
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADID  371 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~  371 (483)
                      +.++...++++|..+|.|++|+|+.+||..+++.+|..+++.+++.+|..+|.+
T Consensus         2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~   55 (77)
T 2joj_A            2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDRE   55 (77)
T ss_dssp             CHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCS
T ss_pred             CHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCC
Confidence            567788999999999999999999999999999999888776666555444433

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=98.68  E-value=3.6e-08  Score=85.12  Aligned_cols=67  Identities=16%  Similarity=0.209  Sum_probs=61.9

Q ss_pred             hhHHHHHHhhcC-CCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          385 KDTSLKDFNIFT-KPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       385 ~~~~~~~F~~~d-~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      ...++.+|+.+| .++        +|+|+.+||..+++.+|.. +++++..++..+|.|++|.|+|+||+.++....
T Consensus        12 ~~~l~~~F~~~D~~~~--------~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~   80 (158)
T 2jnf_A           12 VKLLETAFRDFETPEG--------SGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFL   80 (158)
T ss_dssp             HHHHHHHHHHSBCSSS--------CSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence            456889999999 999        9999999999999999988 899999999999999999999999999987543

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=98.68  E-value=3.5e-08  Score=84.37  Aligned_cols=63  Identities=27%  Similarity=0.464  Sum_probs=38.5

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..++.+|..||.++        +|+|+.+||..+++.+|.. ++.++..++..+|.|++|.|+|+||+.++.
T Consensus        10 ~~l~~~F~~~D~d~--------~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~   73 (148)
T 1exr_A           10 AEFKEAFALFDKDG--------DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMA   73 (148)
T ss_dssp             HHHHHHHHHHCTTC--------SSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            34555666666666        5666666666666666655 555666666666666666666666665553

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=98.67  E-value=6.9e-08  Score=89.36  Aligned_cols=104  Identities=19%  Similarity=0.244  Sum_probs=85.4

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh---------------------h
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL---------------------V  382 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~---------------------~  382 (483)
                      .+..+|+.+|.|++|.|+.+||..++..+.....++.+..+|+.+|.|++|.+.....                     .
T Consensus       103 ~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~  182 (229)
T 3dd4_A          103 YAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKED  182 (229)
T ss_dssp             HHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC----------
T ss_pred             HHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchh
Confidence            4678999999999999999999999998876677888999999999999998322211                     1


Q ss_pred             hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcC
Q 048594          383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDR  440 (483)
Q Consensus       383 ~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~  440 (483)
                      ...+.+..+|+.+|.|+        +|.|+.+|+.+++..     ...+.++|..+|.
T Consensus       183 ~~~~~~~~~f~~~D~d~--------dG~Is~~EF~~~~~~-----~~~~~~~~~~~D~  227 (229)
T 3dd4_A          183 APRQHVETFFQKMDKNK--------DGVVTIDEFIESCQK-----DENIMRSMQLFEN  227 (229)
T ss_dssp             -CCTHHHHHHHHHCSSC--------SSBCCHHHHHHHHHT-----CHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHhcCCC--------CCcEeHHHHHHHHHh-----CHHHHHHHHhccc
Confidence            23567899999999999        999999999999984     4667777777663

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=98.66  E-value=4.5e-08  Score=76.22  Aligned_cols=62  Identities=24%  Similarity=0.417  Sum_probs=51.1

Q ss_pred             hhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCC
Q 048594          313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG  374 (483)
Q Consensus       313 i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g  374 (483)
                      ++..++.++...++++|..+|.|++|+|+.+||..+++.+|..+++++++.++..+|.+++|
T Consensus        10 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg   71 (90)
T 1avs_A           10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG   71 (90)
T ss_dssp             HHHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCS
T ss_pred             HHHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCC
Confidence            44567888899999999999999999999999999999999888887776665555544444

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=98.65  E-value=2.6e-08  Score=83.06  Aligned_cols=90  Identities=17%  Similarity=0.269  Sum_probs=73.3

Q ss_pred             HHHHHHhccCCCCCceeechh---------hhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHh---hCCCC-C
Q 048594          361 VKQYMQAADIDGNGTTLNLSL---------VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFK---EYNMG-D  427 (483)
Q Consensus       361 ~~~l~~~~d~~~~g~~~~~~~---------~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~---~~~~~-~  427 (483)
                      ++++|..+|.+++|.+.....         ..+.+.+..+|+.+|.++        +|.|+.+|+..++.   ..+.. +
T Consensus         2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~--------~g~i~~~ef~~~~~~~~~~~~~~~   73 (134)
T 1jfj_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADG--------NGEIDQNEFAKFYGSIQGQDLSDD   73 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSC--------CSEEEHHHHHHHTTCSSCCSSHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCC--------CCeEcHHHHHHHHHHhcccccCCC
Confidence            578899999999997332221         123567899999999999        99999999999997   33444 5


Q ss_pred             hHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          428 DATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       428 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ++++..++..+|.|++|.|+++||..++...
T Consensus        74 ~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~  104 (134)
T 1jfj_A           74 KIGLKVLYKLMDVDGDGKLTKEEVTSFFKKH  104 (134)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHCCCCCCccCHHHHHHHHHHh
Confidence            6779999999999999999999999999754

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=98.64  E-value=1.6e-07  Score=82.35  Aligned_cols=93  Identities=18%  Similarity=0.192  Sum_probs=77.0

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCC--------HHHHHHHHHhccCCCCCceeechhh-------hchhHHH
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLT--------EVDVKQYMQAADIDGNGTTLNLSLV-------QCKDTSL  389 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~--------~~~~~~l~~~~d~~~~g~~~~~~~~-------~~~~~~~  389 (483)
                      +..+|..+|.|++|.|+.+||..++........        ...+..+|+.+|.+++|.+......       .+.+.+.
T Consensus        60 ~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~  139 (176)
T 1nya_A           60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAA  139 (176)
T ss_dssp             HHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHH
T ss_pred             HHHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHH
Confidence            448999999999999999999999988754444        3568999999999999983332211       3567889


Q ss_pred             HHHhhcCCCCccchhccccccccHHHHHHHHhhCCC
Q 048594          390 KDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM  425 (483)
Q Consensus       390 ~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~  425 (483)
                      .+|+.+|.++        +|+|+.+|+.+++..+..
T Consensus       140 ~~~~~~D~d~--------dg~i~~~ef~~~~~~~~~  167 (176)
T 1nya_A          140 EAFNQVDTNG--------NGELSLDELLTAVRDFHF  167 (176)
T ss_dssp             HHHHHHCTTC--------SSEEEHHHHHHHHSCCSS
T ss_pred             HHHHHhCCCC--------CCCCcHHHHHHHHHHHhc
Confidence            9999999999        999999999999988754

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=98.64  E-value=2.2e-08  Score=85.85  Aligned_cols=59  Identities=19%  Similarity=0.117  Sum_probs=29.4

Q ss_pred             HHHhhcCCCCccchhccccccccHHHHHHHHhhCCC-C-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          390 KDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM-G-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       390 ~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~-~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..|..+|.++        +|.|+..|+...+...-. . .++++..+|+.+|.|++|.|+.+||..++.
T Consensus        50 ~~~~~~d~~~--------~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~  110 (148)
T 2lmt_A           50 DLIAEAENNN--------NGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMI  110 (148)
T ss_dssp             HHHHHHHTTS--------TTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHH
T ss_pred             HHHHhcccCC--------CCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHH
Confidence            3445555555        555555555554433211 1 344455555555555555555555555544

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=98.64  E-value=4.2e-08  Score=105.86  Aligned_cols=114  Identities=17%  Similarity=0.188  Sum_probs=96.4

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh---------hchhHHHHHHh
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV---------QCKDTSLKDFN  393 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~~~~~~~F~  393 (483)
                      ..++.+|..+|.|++|.|+.+||..++..+      +++..+|+.+|.|++|.+...+..         .+.+.+..+|+
T Consensus       575 ~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~  648 (714)
T 3bow_A          575 ETCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVA  648 (714)
T ss_dssp             HHHHHHHHHHCCSSCSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            457788999999999999999999999875      679999999999999983332211         24677899999


Q ss_pred             hcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          394 IFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       394 ~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      .+| |+        +|.|+.+|+..++..     .+.+.++|..+|.|++|.|+++|+..++.
T Consensus       649 ~~D-d~--------dG~Isf~EF~~~l~~-----~~~l~~~F~~~D~d~dG~Is~~el~~l~~  697 (714)
T 3bow_A          649 RFA-DD--------ELIIDFDNFVRCLVR-----LEILFKIFKQLDPENTGTIQLDLISWLSF  697 (714)
T ss_dssp             HHS-CT--------TCEECHHHHHHHHHH-----HHHHHHHHSSSCSSCCSEEEEEHHHHHHH
T ss_pred             HhC-CC--------CCeEcHHHHHHHHHH-----HHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence            999 99        999999999999975     36788899999999999999998876653

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=98.62  E-value=7e-08  Score=84.27  Aligned_cols=61  Identities=31%  Similarity=0.535  Sum_probs=29.0

Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      .+..+|+.+|.++        +|+|+.+||..+++.+|.. +++++..++..+|.|++|.|+|+||+.++
T Consensus        29 ~l~~~F~~~D~d~--------~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~   90 (169)
T 3qrx_A           29 EIREAFDLFDTDG--------SGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMM   90 (169)
T ss_dssp             HHHHHHHHHCTTC--------CSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHhCCCC--------CCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHH
Confidence            3444444444444        4444444444444444444 44444444444444444444444444444

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=98.62  E-value=5.2e-08  Score=75.09  Aligned_cols=62  Identities=21%  Similarity=0.246  Sum_probs=51.4

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHH---HHHHHHhccCCCCCc
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD---VKQYMQAADIDGNGT  375 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~---~~~l~~~~d~~~~g~  375 (483)
                      +..++.+++..++++|+.+|.|++|+|+.+||..+++.+|..++..+   +..++..+|.+++|.
T Consensus         5 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~   69 (86)
T 1j7q_A            5 ARALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNI   69 (86)
T ss_dssp             CCCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCB
T ss_pred             cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCc
Confidence            34567788899999999999999999999999999999999998887   666666555544443

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=98.61  E-value=9.6e-08  Score=69.50  Aligned_cols=64  Identities=23%  Similarity=0.387  Sum_probs=51.2

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccch
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILI  403 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~~  403 (483)
                      .++++|..+|.|++|.|+.+||..+++.+|..++.++++.                           +|+.+|.++    
T Consensus         2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~---------------------------~~~~~D~~~----   50 (67)
T 1tiz_A            2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVK---------------------------FFEEIDVDG----   50 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHH---------------------------HHHHHCCSS----
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHH---------------------------HHHHHCCCC----
Confidence            5788999999999999999999999999988777765544                           555566666    


Q ss_pred             hccccccccHHHHHHHHhh
Q 048594          404 RIMISIYITADELEAAFKE  422 (483)
Q Consensus       404 ~~~~~g~i~~~el~~~~~~  422 (483)
                          +|.|+.+|+..++..
T Consensus        51 ----dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A           51 ----NGELNADEFTSCIEK   65 (67)
T ss_dssp             ----SSEECHHHHHHHHHT
T ss_pred             ----CCcCcHHHHHHHHHH
Confidence                677777777777654

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=98.59  E-value=9.5e-08  Score=82.52  Aligned_cols=60  Identities=18%  Similarity=0.185  Sum_probs=29.4

Q ss_pred             HHHHhhcCCCCccchhccccccccHHHHHHHHhhC-CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          389 LKDFNIFTKPSNILIRIMISIYITADELEAAFKEY-NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       389 ~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~-~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+|+.+|.++        +|.|+.+|+..++... ... ..+.+..+|..+|.|++|.|+.+||..+++
T Consensus        62 ~~l~~~~d~~~--------~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~  123 (161)
T 3fwb_A           62 LDLIDEYDSEG--------RHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAK  123 (161)
T ss_dssp             HHHHHHHCTTS--------SSCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             HHHHHHhCcCC--------CCeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHH
Confidence            33455555555        5555555555554432 111 244455555555555555555555555554

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=98.59  E-value=9.6e-08  Score=81.05  Aligned_cols=89  Identities=18%  Similarity=0.160  Sum_probs=48.8

Q ss_pred             HHHHHHhccCCCCCceeechhhhchhH---------HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCC-C-ChH
Q 048594          361 VKQYMQAADIDGNGTTLNLSLVQCKDT---------SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM-G-DDA  429 (483)
Q Consensus       361 ~~~l~~~~d~~~~g~~~~~~~~~~~~~---------~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~-~-~~~  429 (483)
                      +..+|..+|.+++|.+........-..         +..+|+.+|.++        +|.|+.+|+..++..... . ..+
T Consensus        13 l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~--------~g~i~~~ef~~~~~~~~~~~~~~~   84 (147)
T 4ds7_A           13 FKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG--------NHAIEFSEFLALMSRQLKCNDSEQ   84 (147)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTS--------SSEEEHHHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCC--------CCcCcHHHHHHHHHHhccCCCcHH
Confidence            445566666666665333322211111         345566666666        666666666666654311 1 345


Q ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          430 TIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       430 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+..+|..+|.|++|.|+.+||..+++.
T Consensus        85 ~~~~~F~~~D~d~~G~i~~~e~~~~l~~  112 (147)
T 4ds7_A           85 ELLEAFKVFDKNGDGLISAAELKHVLTS  112 (147)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCeECHHHHHHHHHH
Confidence            5666666666666666666666666654

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=98.58  E-value=5.7e-08  Score=87.80  Aligned_cols=115  Identities=13%  Similarity=0.118  Sum_probs=84.6

Q ss_pred             CCCCcCHHHHHHHHHhcCCCCC-HHHHHHHHHhccCCCCCceeechhh-----hchhHHHHHHhhcCCCCccchhccccc
Q 048594          336 DSGTLTYDEFKAGLSKLGSTLT-EVDVKQYMQAADIDGNGTTLNLSLV-----QCKDTSLKDFNIFTKPSNILIRIMISI  409 (483)
Q Consensus       336 ~~G~l~~~el~~~l~~~~~~~~-~~~~~~l~~~~d~~~~g~~~~~~~~-----~~~~~~~~~F~~~d~~~~~~~~~~~~g  409 (483)
                      +++.|+.+++..+.+..+.... ..++.++|..+|.|++|.+......     .....+..+|+.+|.++        +|
T Consensus         5 ~s~~l~~~~~~~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~~~lg~~~~~~~l~~~~D~d~--------dg   76 (202)
T 2bec_A            5 SSHAAVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGDRIIESFFPDG--------SQ   76 (202)
T ss_dssp             ------CCSTTTHHHHHCCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTCHHHHHSTTHHHHHHTTSCSS--------CC
T ss_pred             ccCCcCHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHhcCCCccHHHHHHHhCCCC--------CC
Confidence            3445778888888887754322 2336677999999999983322221     11223788999999999        99


Q ss_pred             cccHHHHHHHHhhCCC-----------------C-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          410 YITADELEAAFKEYNM-----------------G-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       410 ~i~~~el~~~~~~~~~-----------------~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      .|+.+|+..++.....                 . ..+.+..+|..+|.|++|.|+.+||..+++.-
T Consensus        77 ~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~  143 (202)
T 2bec_A           77 RVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLM  143 (202)
T ss_dssp             CCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHS
T ss_pred             cCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh
Confidence            9999999999987642                 2 46779999999999999999999999999865

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.58  E-value=9.2e-08  Score=89.76  Aligned_cols=108  Identities=13%  Similarity=0.118  Sum_probs=76.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEeccC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKREHCD   99 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E~~~   99 (483)
                      ..|.+....+.|..+.||++.. .+|..+++|+.......                             ...|+||||++
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~   98 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP   98 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred             CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence            4566655555667799999964 46778999997654110                             01189999999


Q ss_pred             CCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-------------------------------------------
Q 048594          100 GGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG-------------------------------------------  136 (483)
Q Consensus       100 g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~-------------------------------------------  136 (483)
                      |.+|.  ..   ..+   ...++.+++..|..||+..                                           
T Consensus        99 G~~l~--~~---~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (264)
T 1nd4_A           99 GQDLL--SS---HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL  170 (264)
T ss_dssp             SEETT--TS---CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred             CcccC--cC---cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence            98883  21   122   2356777888888888753                                           


Q ss_pred             ---------------CeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594          137 ---------------IMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus       137 ---------------ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                                     ++|+|++|.||++.   ....+.|+||+.+..
T Consensus       171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          171 FARLKARMPDGEDLVVTHGDACLPNIMVE---NGRFSGFIDCGRLGV  214 (264)
T ss_dssp             HHHHHHTCCSSCCEEEECSSCCGGGEEEE---TTEEEEECCCTTCEE
T ss_pred             HHHHHHhcCCCCCeEEECCCCCCCcEEEE---CCcEEEEEcchhccc
Confidence                           99999999999994   344567999998764

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=98.56  E-value=1.4e-07  Score=83.24  Aligned_cols=90  Identities=21%  Similarity=0.199  Sum_probs=45.2

Q ss_pred             HHHHHHHhccCCCCCceeechhhhchhH---------HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCC-C-Ch
Q 048594          360 DVKQYMQAADIDGNGTTLNLSLVQCKDT---------SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM-G-DD  428 (483)
Q Consensus       360 ~~~~l~~~~d~~~~g~~~~~~~~~~~~~---------~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~-~-~~  428 (483)
                      ++..+|..+|.+++|.+........-..         +...|+.+|.++        +|.|+.+|+..++..... . ..
T Consensus        12 ~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~--------~g~i~~~EF~~~~~~~~~~~~~~   83 (179)
T 2f2o_A           12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGTIDFPEFLTMMARKMKDTDSE   83 (179)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTC--------SSSBCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCC--------CCCCcHHHHHHHHHHHccCcccH
Confidence            3455566666666655322222111111         344555666666        566666666555544311 1 23


Q ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          429 ATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       429 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +.+..+|..+|.|++|.|+.+||..++..
T Consensus        84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~  112 (179)
T 2f2o_A           84 EEIREAFRVFDKDGNGYISAAELRHVMTN  112 (179)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            44555556666666666666666665544

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=98.56  E-value=1e-07  Score=87.88  Aligned_cols=111  Identities=11%  Similarity=0.053  Sum_probs=80.3

Q ss_pred             CCcCHHHHHHHHHhcCCCCCH-HHHHHHHHhccCC--CCCceeechhh--------hchhHHHHHHhhcCCCCccchhcc
Q 048594          338 GTLTYDEFKAGLSKLGSTLTE-VDVKQYMQAADID--GNGTTLNLSLV--------QCKDTSLKDFNIFTKPSNILIRIM  406 (483)
Q Consensus       338 G~l~~~el~~~l~~~~~~~~~-~~~~~l~~~~d~~--~~g~~~~~~~~--------~~~~~~~~~F~~~d~~~~~~~~~~  406 (483)
                      +.++.+++..+.+..+....+ .++.++|..+|.+  ++|.+......        .....+..+|+.+|.++       
T Consensus        26 ~~l~~~~~~~l~~~~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~~~~~~~~~~~~~f~~~D~d~-------   98 (226)
T 2zfd_A           26 QSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKH-------   98 (226)
T ss_dssp             ------CTHHHHHHSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCCHHHHHHHHHHCSSC-------
T ss_pred             ccCCHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhccCcccHHHHHHHHHHHcCCC-------
Confidence            345567777777765533222 3366789999998  99973222211        12234677999999999       


Q ss_pred             ccccccHHHHHHHHhhCCCC--ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          407 ISIYITADELEAAFKEYNMG--DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       407 ~~g~i~~~el~~~~~~~~~~--~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                       +|.|+.+|+..++..++..  ..+.+..+|..+|.|++|.|+++||..++.
T Consensus        99 -dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~  149 (226)
T 2zfd_A           99 -NGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVV  149 (226)
T ss_dssp             -SSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHH
T ss_pred             -CCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Confidence             9999999999999987643  567799999999999999999999999985

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=98.55  E-value=1.1e-07  Score=85.14  Aligned_cols=63  Identities=32%  Similarity=0.383  Sum_probs=41.8

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+..+|+.+|.++        +|+|+.+||..+|+.+|.. +++++..++..+|.|++|.|+|+||+.++.
T Consensus        10 ~~l~~~F~~~D~d~--------dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~   73 (188)
T 1s6i_A           10 GGLKELFKMIDTDN--------SGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATV   73 (188)
T ss_dssp             CSHHHHHHTTSSSS--------SSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCC--------CCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHH
Confidence            34566666666666        6666666666666666655 666666666666666666666666666654

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=98.55  E-value=9.2e-08  Score=85.30  Aligned_cols=93  Identities=15%  Similarity=0.149  Sum_probs=76.7

Q ss_pred             CCHHHHHHHHHhccCCCCCceeech--------------------hhhchhHHHHHHhhcCCCCccchhccccccccHHH
Q 048594          356 LTEVDVKQYMQAADIDGNGTTLNLS--------------------LVQCKDTSLKDFNIFTKPSNILIRIMISIYITADE  415 (483)
Q Consensus       356 ~~~~~~~~l~~~~d~~~~g~~~~~~--------------------~~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~e  415 (483)
                      -...++.++|..+|.+++|.+....                    .......+..+|+.+|.++        +|.|+.+|
T Consensus        37 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~--------~g~i~~~e  108 (191)
T 3khe_A           37 EETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDR--------NGYIEYSE  108 (191)
T ss_dssp             TTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTC--------SSSEEHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCC--------CCcCCHHH
Confidence            3456789999999999999832221                    1123566889999999999        99999999


Q ss_pred             HHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          416 LEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       416 l~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      +..++...... ..+.+..+|..+|.|++|.|+.+||..++.
T Consensus       109 f~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~  150 (191)
T 3khe_A          109 FVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG  150 (191)
T ss_dssp             HHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred             HHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc
Confidence            99998765433 678999999999999999999999999998

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=98.55  E-value=7.7e-08  Score=86.33  Aligned_cols=92  Identities=21%  Similarity=0.131  Sum_probs=67.9

Q ss_pred             HHHHHHHHhccCCCCCceeechhhhchhH--------HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHH
Q 048594          359 VDVKQYMQAADIDGNGTTLNLSLVQCKDT--------SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDAT  430 (483)
Q Consensus       359 ~~~~~l~~~~d~~~~g~~~~~~~~~~~~~--------~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~  430 (483)
                      .++.++|..+|.+++|.+........-..        +...|+.+|.++        +|.|+.+|+..++.......++.
T Consensus        52 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~l~~~~D~d~--------~g~i~~~EF~~~~~~~~~~~~~~  123 (191)
T 3k21_A           52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDG--------SGKIDYTEFIAAALDRKQLSKKL  123 (191)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCTTHHHHHHHHCTTC--------SSSEEHHHHHHHHSCGGGCCHHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcHHHHHHHHHHhCCCC--------CCeEeHHHHHHHHHhhhhccHHH
Confidence            45777888889888887444333222111        466788889888        89999999888875543336778


Q ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          431 IKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       431 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      +..+|..+|.|++|.|+.+||..+++..
T Consensus       124 l~~~F~~~D~d~~G~Is~~El~~~l~~~  151 (191)
T 3k21_A          124 IYCAFRVFDVDNDGEITTAELAHILYNG  151 (191)
T ss_dssp             HHHHHHHHSTTCSSCBCHHHHHHHHHHS
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence            8888888999999999999999888764

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=98.55  E-value=1.4e-07  Score=73.74  Aligned_cols=71  Identities=25%  Similarity=0.343  Sum_probs=55.0

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhh
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNI  394 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~  394 (483)
                      ..++.++...++++|+.+|.|++|+|+.+||..+++.+|  ++..+++                           .+|+.
T Consensus        19 ~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~---------------------------~~~~~   69 (91)
T 2pmy_A           19 ADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAE---------------------------AVFQR   69 (91)
T ss_dssp             CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHH---------------------------HHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHH---------------------------HHHHH
Confidence            345677888999999999999999999999999999887  4554444                           45556


Q ss_pred             cCCCCccchhccccccccHHHHHHHHhh
Q 048594          395 FTKPSNILIRIMISIYITADELEAAFKE  422 (483)
Q Consensus       395 ~d~~~~~~~~~~~~g~i~~~el~~~~~~  422 (483)
                      +|.++        +|.|+.+|+..++..
T Consensus        70 ~D~d~--------dg~I~~~EF~~~~~~   89 (91)
T 2pmy_A           70 LDADR--------DGAITFQEFARGFLG   89 (91)
T ss_dssp             HCTTC--------SSEECHHHHTHHHHH
T ss_pred             hCCCC--------CCCEeHHHHHHHHHH
Confidence            66666        677777777766654

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=98.54  E-value=8.7e-08  Score=81.85  Aligned_cols=66  Identities=15%  Similarity=0.336  Sum_probs=61.2

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ...+..+|+.+|.++        +|+|+.+||..+++.+|.. +++++..++..+|.+++|.|+|+||+.++...
T Consensus        10 ~~~l~~~F~~~D~d~--------~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~   76 (153)
T 3ox6_A           10 IEELREAFREFDKDK--------DGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPK   76 (153)
T ss_dssp             HHHHHHHHHHHHHHC--------SSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHH
Confidence            456889999999999        9999999999999999988 89999999999999999999999999998653

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=98.53  E-value=3.5e-07  Score=73.76  Aligned_cols=68  Identities=19%  Similarity=0.290  Sum_probs=52.9

Q ss_pred             hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhc---CCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhc
Q 048594          319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL---GSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIF  395 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~---~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~  395 (483)
                      ......++.+|+.+|.|++|+|+.+||..++..+   |..+++++++.+                           |+.+
T Consensus        38 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~---------------------------~~~~   90 (109)
T 3fs7_A           38 SKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAF---------------------------LAAG   90 (109)
T ss_dssp             TCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHH---------------------------HHHH
T ss_pred             CCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHH---------------------------HHHh
Confidence            3456689999999999999999999999999998   667776655544                           5555


Q ss_pred             CCCCccchhccccccccHHHHHHHHh
Q 048594          396 TKPSNILIRIMISIYITADELEAAFK  421 (483)
Q Consensus       396 d~~~~~~~~~~~~g~i~~~el~~~~~  421 (483)
                      |.++        +|.|+.+|+.++++
T Consensus        91 D~~~--------dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           91 DTDG--------DGKIGVEEFQSLVK  108 (109)
T ss_dssp             CTTC--------SSSBCHHHHHHHHT
T ss_pred             CCCC--------CCcCcHHHHHHHHh
Confidence            6666        67777777776664

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=98.53  E-value=2.9e-07  Score=78.85  Aligned_cols=91  Identities=18%  Similarity=0.247  Sum_probs=75.5

Q ss_pred             HHHHHHHHhccCCCCCceeechh-----hhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC--ChHHH
Q 048594          359 VDVKQYMQAADIDGNGTTLNLSL-----VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG--DDATI  431 (483)
Q Consensus       359 ~~~~~l~~~~d~~~~g~~~~~~~-----~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~--~~~~~  431 (483)
                      .++.++|..+|.+++|.+.....     +.....+..+|+.+|.++        +|.|+.+|+..++..+...  ..+.+
T Consensus         6 ~~l~~~F~~~D~d~~G~i~~~el~~l~~~~~~~~~~~~~~~~D~~~--------~g~i~~~ef~~~~~~~~~~~~~~~~~   77 (155)
T 3ll8_B            6 KRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDG--------NGEVDFKEFIEGVSQFSVKGDKEQKL   77 (155)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHTTSGGGTTCTTHHHHHHHHCTTC--------SSSBCHHHHHHHHGGGCSSCCHHHHH
T ss_pred             HHHHHHHHHhCcCCCCeEcHHHHHHhhccccchHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHHcccCCHHHHH
Confidence            45788899999999998333222     122457889999999999        9999999999999887544  56789


Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          432 KEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       432 ~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+|..+|.|++|.|+.+||..++..
T Consensus        78 ~~~F~~~D~d~~G~i~~~e~~~~l~~  103 (155)
T 3ll8_B           78 RFAFRIYDMDKDGYISNGELFQVLKM  103 (155)
T ss_dssp             HHHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            99999999999999999999999876

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=98.52  E-value=1.8e-07  Score=82.86  Aligned_cols=90  Identities=17%  Similarity=0.170  Sum_probs=73.2

Q ss_pred             HHHHHHHHhccCCCCCceeechhh-------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHH
Q 048594          359 VDVKQYMQAADIDGNGTTLNLSLV-------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATI  431 (483)
Q Consensus       359 ~~~~~l~~~~d~~~~g~~~~~~~~-------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~  431 (483)
                      .++.++|..+|.|++|.+......       .....+..+|+.+|.++        +|.|+.+|+..++.......++.+
T Consensus        39 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~D~d~--------~g~i~~~Ef~~~~~~~~~~~~~~~  110 (180)
T 3mse_B           39 KYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWDINRILQALDIND--------RGNITYTEFMAGCYRWKNIESTFL  110 (180)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTC--------CSEECHHHHHHHHSCCTTC--CHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHhcccCCHHHH
Confidence            457888999999999983332211       12467889999999999        999999999999887644455789


Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          432 KEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       432 ~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+|..+|.|++|.|+.+||..+++
T Consensus       111 ~~~F~~~D~d~~G~I~~~El~~~l~  135 (180)
T 3mse_B          111 KAAFNKIDKDEDGYISKSDIVSLVH  135 (180)
T ss_dssp             HHHHHHHCTTCSSCBCHHHHHHHTT
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHc
Confidence            9999999999999999999999998

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=98.51  E-value=2e-07  Score=72.93  Aligned_cols=57  Identities=19%  Similarity=0.274  Sum_probs=45.2

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ++.++...++++|+.+|.|++|+|+.+|+..+++.+|  ++++++.+++..+|.|++|.
T Consensus         3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~   59 (92)
T 1fi6_A            3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGA   59 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSE
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCC
Confidence            4567888999999999999999999999999999886  55666666666555544443

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=98.51  E-value=4.6e-08  Score=71.09  Aligned_cols=64  Identities=23%  Similarity=0.297  Sum_probs=51.6

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccchh
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIR  404 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~~~  404 (483)
                      ++++|+.+|.|++|.|+.+||..+++.+|..+++                           +.+..+|+.+|.++     
T Consensus         2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~---------------------------~~~~~~~~~~D~~~-----   49 (66)
T 3li6_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNE---------------------------QLLQLIFKSIDADG-----   49 (66)
T ss_dssp             CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHH---------------------------HHHHHHHHHHCTTC-----
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcH---------------------------HHHHHHHHHHCCCC-----
Confidence            3578999999999999999999999987543333                           35666778888888     


Q ss_pred             ccccccccHHHHHHHHhhC
Q 048594          405 IMISIYITADELEAAFKEY  423 (483)
Q Consensus       405 ~~~~g~i~~~el~~~~~~~  423 (483)
                         +|.|+.+|+..++..+
T Consensus        50 ---~g~i~~~ef~~~~~~~   65 (66)
T 3li6_A           50 ---NGEIDQNEFAKFYGSI   65 (66)
T ss_dssp             ---SSSCCHHHHHHHHTCC
T ss_pred             ---CCCCCHHHHHHHHHhc
Confidence               8999999998888653

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=98.51  E-value=2.5e-07  Score=72.94  Aligned_cols=62  Identities=19%  Similarity=0.177  Sum_probs=51.0

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeech
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLS  380 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~  380 (483)
                      ++.++...++++|+.+|+|++|+|+.+|++.+++.+|  ++++++++++..+|.|++|.+...+
T Consensus         4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~E   65 (95)
T 1c07_A            4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQ   65 (95)
T ss_dssp             SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTT
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHH
Confidence            4567888999999999999999999999999999886  5677788888877777777643333

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=98.50  E-value=9.4e-08  Score=72.99  Aligned_cols=73  Identities=25%  Similarity=0.253  Sum_probs=56.2

Q ss_pred             hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcC--CCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcC
Q 048594          319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG--STLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFT  396 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~--~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d  396 (483)
                      .+....++++|..+|.|++|+|+.+||..++..+|  ..++.++++.+.                       ..+|+.+|
T Consensus         3 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~D   59 (83)
T 1yx7_A            3 CKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEAS-----------------------AKLIKMAD   59 (83)
T ss_dssp             SCSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHH-----------------------HHHHTTTC
T ss_pred             ccHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHH-----------------------HHHHHHhC
Confidence            34456799999999999999999999999999988  666655444421                       23777788


Q ss_pred             CCCccchhccccccccHHHHHHHHhh
Q 048594          397 KPSNILIRIMISIYITADELEAAFKE  422 (483)
Q Consensus       397 ~~~~~~~~~~~~g~i~~~el~~~~~~  422 (483)
                      .++        +|.|+.+|+......
T Consensus        60 ~~~--------dg~I~~~eF~~~~~~   77 (83)
T 1yx7_A           60 KNS--------DGKISKEEFLNANAE   77 (83)
T ss_dssp             SSS--------CSCCSHHHHHHHHHH
T ss_pred             CCC--------CCCCcHHHHHHhhHH
Confidence            888        788888888765543

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=98.50  E-value=1.7e-07  Score=74.55  Aligned_cols=64  Identities=19%  Similarity=0.207  Sum_probs=50.8

Q ss_pred             hHHHhhHHHHHhhcC-CCCC-CCcCHHHHHHHHHh-----cCCCCCHHHHHHHHHhccCCCCCceeechhh
Q 048594          319 AEEIQKHKETFKQMD-TNDS-GTLTYDEFKAGLSK-----LGSTLTEVDVKQYMQAADIDGNGTTLNLSLV  382 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D-~d~~-G~l~~~el~~~l~~-----~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~  382 (483)
                      +..+..+.++|+.|| .|++ |+|+.+||+.+++.     +|..+++++++++++.+|.|+||.+...+++
T Consensus         6 e~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~   76 (101)
T 3nso_A            6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYV   76 (101)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence            345678999999997 8987 99999999999996     4667788888888888887777764444443

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=98.49  E-value=1.5e-07  Score=81.31  Aligned_cols=92  Identities=16%  Similarity=0.145  Sum_probs=64.9

Q ss_pred             HHHHHHHhccCCCCCceeechhhhchh---------HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC----
Q 048594          360 DVKQYMQAADIDGNGTTLNLSLVQCKD---------TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG----  426 (483)
Q Consensus       360 ~~~~l~~~~d~~~~g~~~~~~~~~~~~---------~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~----  426 (483)
                      ++.++|..+|.+++|.+........-.         .+..+|+.+|.++        +|.|+.+|+..++......    
T Consensus        21 ~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~--------~g~i~~~ef~~~~~~~~~~~~~~   92 (162)
T 1top_A           21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG--------SGTIDFEEFLVMMVRQMKEDAKG   92 (162)
T ss_dssp             HHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTS--------CCEEEHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCC--------CCcEeHHHHHHHHHHHhcccccc
Confidence            466778888888888754443322211         2466788888888        8888888888887664211    


Q ss_pred             -ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          427 -DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       427 -~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                       ..+.+..+|..+|.|++|.|+.+||..++....
T Consensus        93 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g  126 (162)
T 1top_A           93 KSEEELANCFRIFDKNADGFIDIEELGEILRATG  126 (162)
T ss_dssp             HHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTT
T ss_pred             ccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence             245577788888888888888888888887653

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=98.49  E-value=3.8e-07  Score=79.25  Aligned_cols=68  Identities=22%  Similarity=0.298  Sum_probs=58.7

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCcc
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNI  401 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~  401 (483)
                      ...++++|+.+|+|++|+|+.+||+.+|..+|.++++++++.|++.+|.+.                         |+  
T Consensus        84 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~-------------------------d~--  136 (159)
T 3i5g_C           84 ADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIRE-------------------------DI--  136 (159)
T ss_dssp             HHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCC-------------------------CS--
T ss_pred             HHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCC-------------------------CC--
Confidence            356889999999999999999999999999999999999999988887533                         34  


Q ss_pred             chhccccccccHHHHHHHHhh
Q 048594          402 LIRIMISIYITADELEAAFKE  422 (483)
Q Consensus       402 ~~~~~~~g~i~~~el~~~~~~  422 (483)
                            +|.|+.+|+.+.+..
T Consensus       137 ------dG~I~~~EF~~~m~~  151 (159)
T 3i5g_C          137 ------DGNIKYEDLMKKVMA  151 (159)
T ss_dssp             ------SCCEEHHHHHHHHHH
T ss_pred             ------CCeEeHHHHHHHHHC
Confidence                  688888888877765

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=98.49  E-value=2.8e-07  Score=80.11  Aligned_cols=90  Identities=19%  Similarity=0.101  Sum_probs=62.7

Q ss_pred             HHHHHHhccCCCCCceeechhhhchh---------HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHH
Q 048594          361 VKQYMQAADIDGNGTTLNLSLVQCKD---------TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDAT  430 (483)
Q Consensus       361 ~~~l~~~~d~~~~g~~~~~~~~~~~~---------~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~  430 (483)
                      +..+|..+|.+++|.+........-.         .+..+|+.+|.++        +|.|+.+|+..++..+... ..+.
T Consensus        29 l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~--------~g~i~~~ef~~~~~~~~~~~~~~~  100 (166)
T 2aao_A           29 LKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDN--------SGTIDYKEFIAATLHLNKIEREDH  100 (166)
T ss_dssp             HHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTC--------CSSBCHHHHHHHHTTCHHHHTTHH
T ss_pred             HHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC--------CCeEcHHHHHHHHHHHhhcccHHH
Confidence            56678888888888744433322111         2466788888888        7888888888887665433 4567


Q ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          431 IKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       431 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      +..+|..+|.|++|.|+.+||..+++..
T Consensus       101 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~  128 (166)
T 2aao_A          101 LFAAFTYFDKDGSGYITPDELQQACEEF  128 (166)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHTCC-
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHc
Confidence            7888888888888888888888887643

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=98.48  E-value=2.7e-07  Score=79.67  Aligned_cols=92  Identities=20%  Similarity=0.186  Sum_probs=74.4

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcC----CCCCHHHHHHHHHhccCCCCCceeechh---------hhchhHHHH
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLG----STLTEVDVKQYMQAADIDGNGTTLNLSL---------VQCKDTSLK  390 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~----~~~~~~~~~~l~~~~d~~~~g~~~~~~~---------~~~~~~~~~  390 (483)
                      .+..+|..+|.|++|.|+.+||..++....    .......+..+|..+|.+++|.+.....         ..+.+.+..
T Consensus        56 ~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~  135 (161)
T 1dtl_A           56 ELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEE  135 (161)
T ss_dssp             HHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHH
Confidence            567789999999999999999999988763    3455677999999999999998322211         124677899


Q ss_pred             HHhhcCCCCccchhccccccccHHHHHHHHhhC
Q 048594          391 DFNIFTKPSNILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       391 ~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                      +|+.+|.++        +|.|+.+|+..++..+
T Consensus       136 ~~~~~D~d~--------dg~i~~~eF~~~~~~~  160 (161)
T 1dtl_A          136 LMKDGDKNN--------DGRIDYDEFLEFMKGV  160 (161)
T ss_dssp             HHHHHCTTS--------SSEEEHHHHHHHHHC-
T ss_pred             HHHHhCCCC--------CCcEeHHHHHHHHHcC
Confidence            999999999        9999999999998754

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=98.47  E-value=1.5e-07  Score=79.62  Aligned_cols=105  Identities=9%  Similarity=0.089  Sum_probs=74.7

Q ss_pred             CCHHHHHHHHHhccCCCCCceeechhhhc---------hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCC--
Q 048594          356 LTEVDVKQYMQAADIDGNGTTLNLSLVQC---------KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN--  424 (483)
Q Consensus       356 ~~~~~~~~l~~~~d~~~~g~~~~~~~~~~---------~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~--  424 (483)
                      ++++++.++|..+|.+++|.+........         ...+...|+.   ++        +|.|+.+|+..++....  
T Consensus         2 ls~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~--------~g~i~~~eF~~~~~~~~~~   70 (145)
T 2bl0_B            2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LN--------AKEFDLATFKTVYRKPIKT   70 (145)
T ss_dssp             CCHHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HT--------SSEECHHHHHHHHTSCCCC
T ss_pred             CCHHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cC--------CCeEcHHHHHHHHHHHhhc
Confidence            46677999999999999998544443322         2345555555   66        89999999999887763  


Q ss_pred             CC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCCCCccccccccchh
Q 048594          425 MG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGTSYRNLSHIF  473 (483)
Q Consensus       425 ~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~  473 (483)
                      .. ..+.+..+|..+|.|++|.|+.+||..+++....  ..+...+..+|
T Consensus        71 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~--~~~~~~~~~~~  118 (145)
T 2bl0_B           71 PTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGD--ALTSSEVEELM  118 (145)
T ss_dssp             GGGGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSS--CCCHHHHHHHH
T ss_pred             CcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCC--CCCHHHHHHHH
Confidence            22 5678888999999999999999999999876532  23444444444

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=98.46  E-value=5.7e-08  Score=83.68  Aligned_cols=90  Identities=18%  Similarity=0.121  Sum_probs=60.2

Q ss_pred             HHHHHHHhccC--CCCCceeechhhhchhH---------HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCC--C
Q 048594          360 DVKQYMQAADI--DGNGTTLNLSLVQCKDT---------SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM--G  426 (483)
Q Consensus       360 ~~~~l~~~~d~--~~~g~~~~~~~~~~~~~---------~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~--~  426 (483)
                      ++.++|..+|.  +++|.+........-..         +..+ +.+|.++        +|.|+.+|+..++.....  .
T Consensus        10 ~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~--------~g~i~~~eF~~~~~~~~~~~~   80 (156)
T 1wdc_C           10 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMG--------EKSLPFEEFLPAYEGLMDCEQ   80 (156)
T ss_dssp             HHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTT--------SCEECHHHHHHHHHHHTTSCC
T ss_pred             HHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCC--------CCeeeHHHHHHHHHHHhhccC
Confidence            35667778887  88887443332222111         2344 5667777        788888888877776532  2


Q ss_pred             -ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          427 -DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       427 -~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                       ..+.+..+|..+|.|++|.|+.+||..+++.-
T Consensus        81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~  113 (156)
T 1wdc_C           81 GTFADYMEAFKTFDREGQGFISGAELRHVLTAL  113 (156)
T ss_dssp             CCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS
T ss_pred             ChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc
Confidence             56777788888888888888888888887654

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=98.46  E-value=3.7e-07  Score=80.64  Aligned_cols=90  Identities=11%  Similarity=0.175  Sum_probs=72.8

Q ss_pred             HHHHhhcCCCCCCCcCHHHHHHHHHhcCC---------CCCHHHHHHHHHhccCCCCCceeechhh-------hchhHHH
Q 048594          326 KETFKQMDTNDSGTLTYDEFKAGLSKLGS---------TLTEVDVKQYMQAADIDGNGTTLNLSLV-------QCKDTSL  389 (483)
Q Consensus       326 ~~~F~~~D~d~~G~l~~~el~~~l~~~~~---------~~~~~~~~~l~~~~d~~~~g~~~~~~~~-------~~~~~~~  389 (483)
                      ..+|..+|.|++|.|+.+||..++.....         ......+..+|+.+|.|++|.+......       .+.+.+.
T Consensus        63 ~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~  142 (185)
T 2sas_A           63 RDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVP  142 (185)
T ss_dssp             HHHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHH
T ss_pred             HHHHHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHH
Confidence            36699999999999999999999887621         2245779999999999999983222211       2367889


Q ss_pred             HHHhhcCCCCccchhccccccccHHHHHHHHhhC
Q 048594          390 KDFNIFTKPSNILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       390 ~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                      .+|+.+|.|+        +|.|+.+|+..++...
T Consensus       143 ~~~~~~D~d~--------dG~i~~~ef~~~~~~~  168 (185)
T 2sas_A          143 AVYNVITDGG--------KVTFDLNRYKELYYRL  168 (185)
T ss_dssp             HHHHHHHTTT--------TSCCSHHHHHHHHHHH
T ss_pred             HHHHHhcCCC--------CCcCcHHHHHHHHHHH
Confidence            9999999999        9999999999988764

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=98.45  E-value=5e-07  Score=73.40  Aligned_cols=64  Identities=17%  Similarity=0.225  Sum_probs=50.2

Q ss_pred             chHHHhhHHHHHhhcC-CCCCC-CcCHHHHHHHHHh-----cCCCCCHHHHHHHHHhccCCCCCceeechh
Q 048594          318 PAEEIQKHKETFKQMD-TNDSG-TLTYDEFKAGLSK-----LGSTLTEVDVKQYMQAADIDGNGTTLNLSL  381 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D-~d~~G-~l~~~el~~~l~~-----~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~  381 (483)
                      ..+++..++++|+.|| .|++| +|+.+||+.+++.     +|.++++++++++++.+|.|++|.+....+
T Consensus        17 ~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF   87 (113)
T 2lnk_A           17 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEY   87 (113)
T ss_dssp             HHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHH
T ss_pred             chhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHH
Confidence            3456778999999999 89997 9999999999986     666777777777777777766666444333

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=98.45  E-value=4.8e-08  Score=83.59  Aligned_cols=67  Identities=13%  Similarity=0.261  Sum_probs=60.6

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCC--CCCcccHHHHHHHHHcCC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRD--KDGRISYEEFCATMKTGT  459 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~  459 (483)
                      ...++.+|+.||+++        +|+|+.+||..+++.+|.. +++++..++..+|.+  ++|.|+|+||+.++....
T Consensus         9 ~~~l~~~F~~~D~d~--------~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~   78 (151)
T 1w7j_B            9 LEEFKEAFELFDRVG--------DGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVA   78 (151)
T ss_dssp             --CHHHHHHHHCCSS--------SSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCC--------CCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHh
Confidence            356889999999999        9999999999999999988 899999999999999  999999999999987643

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=98.45  E-value=2.8e-07  Score=79.88  Aligned_cols=91  Identities=18%  Similarity=0.176  Sum_probs=72.6

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCC-------HHHHHHHHHhccCCCCCceeechhh-------hchhHHHH
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLT-------EVDVKQYMQAADIDGNGTTLNLSLV-------QCKDTSLK  390 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~-------~~~~~~l~~~~d~~~~g~~~~~~~~-------~~~~~~~~  390 (483)
                      +..+|..+|.|++|.|+.+||..++.......+       ...+..+|+.+|.+++|.+......       .+.+.+..
T Consensus        57 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~~~~~~~~~  136 (166)
T 3akb_A           57 WQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFGVPEDLARQ  136 (166)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTTCCHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCHHHHHH
Confidence            347899999999999999999999887643221       2348899999999999983332211       35677899


Q ss_pred             HHhhcCCCCccchhccccccccHHHHHHHHhhC
Q 048594          391 DFNIFTKPSNILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       391 ~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                      +|+.+|.++        +|.|+.+|+..++..+
T Consensus       137 ~~~~~D~d~--------dg~i~~~ef~~~~~~~  161 (166)
T 3akb_A          137 AAAALDTDG--------DGKVGETEIVPAFARY  161 (166)
T ss_dssp             HHHHHCTTC--------SSBCCHHHHHHHHHHH
T ss_pred             HHHHhCCCC--------CCcCcHHHHHHHHHHH
Confidence            999999999        9999999999998764

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=98.45  E-value=2.7e-07  Score=82.18  Aligned_cols=65  Identities=11%  Similarity=0.119  Sum_probs=58.6

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHH-----HHHhhCCCC-ChH-----HHHHHHHHHcCCCCCcccHHHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELE-----AAFKEYNMG-DDA-----TIKEIMFEVDRDKDGRISYEEFCA  453 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~-----~~~~~~~~~-~~~-----~~~~~~~~~d~~~~g~i~~~ef~~  453 (483)
                      ...++.+|+.+|+++        +|+|+.+||.     .+++.+|.. ++.     ++..++..+|.|++|.|+|+||+.
T Consensus        15 ~~~l~~~F~~~D~d~--------~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~   86 (191)
T 1uhk_A           15 IGRHKHMFNFLDVNH--------NGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIE   86 (191)
T ss_dssp             HHHHHHHHHHHCTTC--------CSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHH
T ss_pred             HHHHHHHHhhccCCC--------CCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHH
Confidence            456889999999999        9999999999     899999988 555     688999999999999999999999


Q ss_pred             HHHc
Q 048594          454 TMKT  457 (483)
Q Consensus       454 ~~~~  457 (483)
                      ++..
T Consensus        87 ~~~~   90 (191)
T 1uhk_A           87 GWKK   90 (191)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8754

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=98.44  E-value=8.5e-08  Score=73.97  Aligned_cols=62  Identities=53%  Similarity=0.814  Sum_probs=52.4

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      +..++.+++..++++|..+|.|++|+|+.+||..+++.+|..++.++++.++..+|.+++|.
T Consensus        14 ~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~   75 (87)
T 1s6j_A           14 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGT   75 (87)
T ss_dssp             SSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSE
T ss_pred             HHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence            34456667778999999999999999999999999999999999888887777777666665

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=98.44  E-value=3.7e-07  Score=77.56  Aligned_cols=65  Identities=20%  Similarity=0.352  Sum_probs=60.3

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHH---cCCCCCcccHHHHHHHHHcC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEV---DRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~---d~~~~g~i~~~ef~~~~~~~  458 (483)
                      ...++.+|+.+|+++        +|+|+.+||..+++.+|.. +++++..++..+   |.++ |.|+|+||+.++...
T Consensus         7 ~~~l~~~F~~~D~~~--------~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~   75 (149)
T 2mys_C            7 ADDFKEAFLLFDRTG--------DAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAA   75 (149)
T ss_pred             HHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHH
Confidence            456889999999999        9999999999999999988 899999999999   9999 999999999998765

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.43  E-value=1.7e-07  Score=97.00  Aligned_cols=111  Identities=17%  Similarity=0.170  Sum_probs=82.9

Q ss_pred             CcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh-----------------hhchhHHHHHHhhcCCCCcc
Q 048594          339 TLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL-----------------VQCKDTSLKDFNIFTKPSNI  401 (483)
Q Consensus       339 ~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~-----------------~~~~~~~~~~F~~~d~~~~~  401 (483)
                      .+...-+......+-..-..++++++|+.+|.|++|.+...+.                 ....+.+..+|+.+|.|+  
T Consensus       326 ~l~qa~l~~ia~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~--  403 (494)
T 3lij_A          326 KLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDR--  403 (494)
T ss_dssp             HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTC--
T ss_pred             HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCC--
Confidence            3433333333333322223456889999999999998333222                 123577899999999999  


Q ss_pred             chhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          402 LIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       402 ~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                            +|.|+.+|+..++...+.. +++++..+|+.+|.|+||.|+++||..++..
T Consensus       404 ------~G~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~  454 (494)
T 3lij_A          404 ------NGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL  454 (494)
T ss_dssp             ------SSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C
T ss_pred             ------CCcCcHHHHHHHHHhhhccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence                  9999999999998766433 7889999999999999999999999999865

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=98.43  E-value=1.2e-07  Score=85.53  Aligned_cols=91  Identities=18%  Similarity=0.130  Sum_probs=62.2

Q ss_pred             HHHHHHHhccCCCCCceeechhhhchhH---------HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChH
Q 048594          360 DVKQYMQAADIDGNGTTLNLSLVQCKDT---------SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDA  429 (483)
Q Consensus       360 ~~~~l~~~~d~~~~g~~~~~~~~~~~~~---------~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~  429 (483)
                      ++.++|..+|.+++|.+........-..         +..+|+.+|.++        +|.|+.+|+..++...... .++
T Consensus        58 ~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~--------~g~I~~~EF~~~~~~~~~~~~~~  129 (197)
T 3pm8_A           58 NLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNA--------SGQIHYTDFLAATIDKQTYLKKE  129 (197)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC---------------CEEHHHHHHTTCCHHHHCSHH
T ss_pred             HHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC--------CCeEcHHHHHHHHHHHHhhhhHH
Confidence            3677888999999998544443332221         456889999999        8999999998887655333 677


Q ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          430 TIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       430 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      .+..+|..+|.|++|.|+.+||..++...
T Consensus       130 ~l~~~F~~~D~d~~G~Is~~El~~~l~~~  158 (197)
T 3pm8_A          130 VCLIPFKFFDIDGNGKISVEELKRIFGRD  158 (197)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHC--
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            88889999999999999999999998764

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=98.43  E-value=3e-07  Score=67.74  Aligned_cols=54  Identities=24%  Similarity=0.581  Sum_probs=44.8

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ...++++|..+|.|++|+|+.+||..+++.+|..++..+++.++..+|.+++|.
T Consensus         5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~   58 (71)
T 2b1u_A            5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGR   58 (71)
T ss_dssp             HHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSE
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence            457899999999999999999999999999998888877776666666555544

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.43  E-value=6.6e-07  Score=88.50  Aligned_cols=111  Identities=17%  Similarity=0.334  Sum_probs=82.8

Q ss_pred             EeeeecccCceeEEEEEECCCCCEEEEEEec--cCCC-------------------------------C-----CcCeEE
Q 048594           53 IAEELCRGESGRIYLCTENSTGLQFACKSIS--KTSK-------------------------------S-----DEGYLK   94 (483)
Q Consensus        53 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~--~~~~-------------------------------~-----~~~~lv   94 (483)
                      .++.|+.|.++.||++...  +..+++|+..  ....                               .     ...|+|
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            4678999999999998765  4689999886  3210                               0     012899


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS----------------------------------------  134 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~----------------------------------------  134 (483)
                      |||++|..+.+..  -..++......++.+++..|..||+                                        
T Consensus       120 me~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (359)
T 3dxp_A          120 MEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM  197 (359)
T ss_dssp             EECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred             EEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence            9999998775422  2347788889999999999999997                                        


Q ss_pred             ------------------CCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594          135 ------------------NGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus       135 ------------------~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                                        ..++|+|++|.||++..++ ...+.|+||+.+..
T Consensus       198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~-~~v~~viDwe~a~~  248 (359)
T 3dxp_A          198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTE-PRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSS-SCEEEECCCTTCEE
T ss_pred             HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCC-CcEEEEECcccccc
Confidence                              3589999999999995321 13469999998875

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=98.43  E-value=6.8e-07  Score=71.98  Aligned_cols=69  Identities=23%  Similarity=0.316  Sum_probs=53.4

Q ss_pred             hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhc---CCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhc
Q 048594          319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL---GSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIF  395 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~---~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~  395 (483)
                      ......++.+|+.+|.|++|+|+.+||..+++.+   |..+++++++.+                           |+.+
T Consensus        37 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~---------------------------~~~~   89 (109)
T 5pal_A           37 GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKAL---------------------------LAAG   89 (109)
T ss_dssp             TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHH---------------------------HHHH
T ss_pred             cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHH---------------------------HHHh
Confidence            4456689999999999999999999999999998   777777655544                           5555


Q ss_pred             CCCCccchhccccccccHHHHHHHHhh
Q 048594          396 TKPSNILIRIMISIYITADELEAAFKE  422 (483)
Q Consensus       396 d~~~~~~~~~~~~g~i~~~el~~~~~~  422 (483)
                      |.++        +|.|+.+|+..+++.
T Consensus        90 D~~~--------dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           90 DSDH--------DGKIGADEFAKMVAQ  108 (109)
T ss_dssp             CTTC--------SSSEEHHHHHHHHHH
T ss_pred             CCCC--------CCcCcHHHHHHHHHh
Confidence            5666        677777777766653

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=98.41  E-value=1.2e-06  Score=79.52  Aligned_cols=111  Identities=14%  Similarity=0.135  Sum_probs=85.0

Q ss_pred             CcCHHHHHHHHHhcCCCCCH-HHHHHHHHhccCCCCCceeechhhh-----chhHHHHHHhhcCCCCccchhcccccccc
Q 048594          339 TLTYDEFKAGLSKLGSTLTE-VDVKQYMQAADIDGNGTTLNLSLVQ-----CKDTSLKDFNIFTKPSNILIRIMISIYIT  412 (483)
Q Consensus       339 ~l~~~el~~~l~~~~~~~~~-~~~~~l~~~~d~~~~g~~~~~~~~~-----~~~~~~~~F~~~d~~~~~~~~~~~~g~i~  412 (483)
                      .|+.+++..+.+..+....+ .++.++|..+|.|++|.+.......     .......+|+.+|.++        +|.|+
T Consensus         8 ~l~~~~~~~l~~~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~~lg~~~~~~~l~~~~d~~~--------~g~i~   79 (208)
T 2ct9_A            8 LLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSEG--------EDQVN   79 (208)
T ss_dssp             CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCHHHHTSTTHHHHHHTTSCTT--------CSCEE
T ss_pred             CCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHcCCCCcHHHHHHHHcCCC--------CCcCc
Confidence            48899999888877643322 3366779999999999843332221     1122467899999999        99999


Q ss_pred             HHHHHHHHhhCCCC-----------------ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          413 ADELEAAFKEYNMG-----------------DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       413 ~~el~~~~~~~~~~-----------------~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+|+..++......                 ..+.+..+|..+|.|++|.|+.+||..+++.
T Consensus        80 ~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~  141 (208)
T 2ct9_A           80 FRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRM  141 (208)
T ss_dssp             HHHHHHHHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHH
Confidence            99999999875321                 3567888999999999999999999999985

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=98.40  E-value=4.9e-07  Score=71.00  Aligned_cols=54  Identities=30%  Similarity=0.597  Sum_probs=43.5

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCC
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG  374 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g  374 (483)
                      ....++++|+.+|.|++|+|+.+||..+++.+|..+++++++.+++.+|.+++|
T Consensus        27 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG   80 (94)
T 2kz2_A           27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG   80 (94)
T ss_dssp             CHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSS
T ss_pred             HHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCC
Confidence            445789999999999999999999999999999888887766665555444333

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=98.40  E-value=6.1e-07  Score=72.88  Aligned_cols=57  Identities=26%  Similarity=0.359  Sum_probs=45.2

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ++.++...++++|+.+|.|++|+|+.+||+.+++  +..++.+++..++..+|.|++|.
T Consensus         8 ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~   64 (111)
T 2kgr_A            8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGK   64 (111)
T ss_dssp             SCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSE
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCC
Confidence            4667888999999999999999999999999998  55566766666666555555544

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=98.40  E-value=3.8e-07  Score=81.49  Aligned_cols=65  Identities=12%  Similarity=0.169  Sum_probs=57.9

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHH-----HHHhhCCCC-ChH-----HHHHHHHHHcCCCCCcccHHHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELE-----AAFKEYNMG-DDA-----TIKEIMFEVDRDKDGRISYEEFCA  453 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~-----~~~~~~~~~-~~~-----~~~~~~~~~d~~~~g~i~~~ef~~  453 (483)
                      ...+..+|+.+|.++        +|+|+.+||.     .+++.+|.. ++.     ++..++..+|.|++|.|+|+||+.
T Consensus        19 ~~~l~~~F~~~D~d~--------~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~   90 (195)
T 1qv0_A           19 IKRHKHMFDFLDING--------NGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLD   90 (195)
T ss_dssp             HHHHHHHHHHHCTTC--------SSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHH
T ss_pred             HHHHHHHHhHcCCCC--------CCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHH
Confidence            456889999999999        9999999999     788999987 555     588899999999999999999999


Q ss_pred             HHHc
Q 048594          454 TMKT  457 (483)
Q Consensus       454 ~~~~  457 (483)
                      ++..
T Consensus        91 ~~~~   94 (195)
T 1qv0_A           91 GWKQ   94 (195)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8754

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.40  E-value=4.4e-07  Score=94.16  Aligned_cols=114  Identities=17%  Similarity=0.165  Sum_probs=85.6

Q ss_pred             CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh-----------------hhchhHHHHHHhhcCCC
Q 048594          336 DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL-----------------VQCKDTSLKDFNIFTKP  398 (483)
Q Consensus       336 ~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~-----------------~~~~~~~~~~F~~~d~~  398 (483)
                      ....+....+..+...+-..-...+++++|+.+|.|++|.+...+.                 ....+.+..+|+.+|.|
T Consensus       332 ~~~kl~~a~l~~i~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d  411 (504)
T 3q5i_A          332 GSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFD  411 (504)
T ss_dssp             CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHhhccCCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCC
Confidence            3444544444444444322223355888999999999998333221                 12357789999999999


Q ss_pred             CccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          399 SNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       399 ~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +        +|.|+.+|+..++...... +++++..+|+.+|.|+||.|+.+||..++..
T Consensus       412 ~--------dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~  463 (504)
T 3q5i_A          412 K--------NGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGL  463 (504)
T ss_dssp             C--------SSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC
T ss_pred             C--------CCcEeHHHHHHHHHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence            9        9999999999998765433 6889999999999999999999999999875

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=98.38  E-value=4.9e-07  Score=76.89  Aligned_cols=90  Identities=12%  Similarity=0.021  Sum_probs=70.7

Q ss_pred             hHHHHHhhc-CCCCCCCcCHHHHHHHHHhc------CCCCCHHHHHHHHHhccCCCCCceeechh---------hhchhH
Q 048594          324 KHKETFKQM-DTNDSGTLTYDEFKAGLSKL------GSTLTEVDVKQYMQAADIDGNGTTLNLSL---------VQCKDT  387 (483)
Q Consensus       324 ~l~~~F~~~-D~d~~G~l~~~el~~~l~~~------~~~~~~~~~~~l~~~~d~~~~g~~~~~~~---------~~~~~~  387 (483)
                      .+..+|..+ |.|++|.|+.+||..++...      ........+..+|+.+|.+++|.+.....         ..+.+.
T Consensus        41 ~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~  120 (148)
T 1m45_A           41 LVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAE  120 (148)
T ss_dssp             HHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHH
T ss_pred             HHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHH
Confidence            577789999 99999999999999998876      44556678999999999999997322211         124677


Q ss_pred             HHHHHhhcCCCCccchhccccccccHHHHHHHHh
Q 048594          388 SLKDFNIFTKPSNILIRIMISIYITADELEAAFK  421 (483)
Q Consensus       388 ~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~  421 (483)
                      +..+|+.+|.++        +|.|+.+|+..++.
T Consensus       121 ~~~~~~~~d~d~--------dg~i~~~eF~~~~~  146 (148)
T 1m45_A          121 VDELLKGVEVDS--------NGEIDYKKFIEDVL  146 (148)
T ss_dssp             HHHHHTTCCCCT--------TSEEEHHHHHHHHH
T ss_pred             HHHHHHHhCCCC--------CCeEeHHHHHHHHh
Confidence            899999999999        99999999999875

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=98.38  E-value=5.4e-07  Score=80.36  Aligned_cols=66  Identities=23%  Similarity=0.265  Sum_probs=59.8

Q ss_pred             hhHHHHHHhhc-CCCCccchhccccccccHHHHHHHHhhC----CCC-ChHHHHHHH-----------HHHcCCCCCccc
Q 048594          385 KDTSLKDFNIF-TKPSNILIRIMISIYITADELEAAFKEY----NMG-DDATIKEIM-----------FEVDRDKDGRIS  447 (483)
Q Consensus       385 ~~~~~~~F~~~-d~~~~~~~~~~~~g~i~~~el~~~~~~~----~~~-~~~~~~~~~-----------~~~d~~~~g~i~  447 (483)
                      ..++..+|+.+ |.|+        +|+|+.+||..+++.+    |.. +.+++..++           ..+|.|++|.|+
T Consensus        11 ~~~l~~~F~~~~D~d~--------dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~   82 (191)
T 2ccm_A           11 RNKILRVFNTFYDCNH--------DGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVT   82 (191)
T ss_dssp             HHHHHHHHHHHTCTTC--------SSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEE
T ss_pred             HHHHHHhccccccCCC--------CCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEC
Confidence            45688999999 9999        9999999999999998    877 788888888           999999999999


Q ss_pred             HHHHHHHHHcC
Q 048594          448 YEEFCATMKTG  458 (483)
Q Consensus       448 ~~ef~~~~~~~  458 (483)
                      |+||+.++...
T Consensus        83 ~~Ef~~~~~~~   93 (191)
T 2ccm_A           83 KEEWLKMWAEC   93 (191)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999988653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	483
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-69
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	6e-66
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-64
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	7e-62
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-60
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-60
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-58
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-56
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-56
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-55
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-55
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-55
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-54
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-51
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-50
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	9e-49
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-48
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-48
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-48
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	6e-47
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-46
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-45
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-45
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-45
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-45
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-43
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-42
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-42
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-42
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-42
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	6e-42
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-40
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-40
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-39
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-39
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-39
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-38
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-38
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	8e-38
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-37
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-37
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-36
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-36
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-35
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-35
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-35
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	8e-35
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-34
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-34
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	5e-33
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-33
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-32
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-32
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-32
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-30
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	7e-30
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-29
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-29
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	8e-29
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-28
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-27
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-26
d1dtla_	156	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	7e-17
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	3e-16
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-15
d1lkja_	146	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	4e-15
d2obha1	141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	8e-15
d1w7jb1	139	a.39.1.5 (B:11-149) Myosin Essential Chain {Human	2e-14
d1bjfa_	181	a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId	5e-14
d1jfja_	134	a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly	1e-13
d1s6ia_	182	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	3e-13
d1qv0a_	189	a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr	4e-13
d1jbaa_	189	a.39.1.5 (A:) Guanylate cyclase activating protein	5e-13
d1g8ia_	187	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	1e-12
d1uhka1	187	a.39.1.5 (A:3-189) Calcium-regulated photoprotein	1e-12
d1uhka1	187	a.39.1.5 (A:3-189) Calcium-regulated photoprotein	2e-04
d1nyaa_	176	a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth	1e-12
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	2e-12
d1wdcb_	142	a.39.1.5 (B:) Myosin Essential Chain {Bay scallop	2e-12
d2sasa_	185	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	3e-12
d2zfda1	183	a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {	3e-12
d2zfda1	183	a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {	0.003
d2scpa_	174	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	5e-12
d1fpwa_	190	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	5e-12
d1m45a_	146	a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye	6e-12
d1wdcc_	152	a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop	7e-12
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	1e-11
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	6e-06
d1s6ca_	178	a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera	4e-11
d1df0a1	186	a.39.1.8 (A:515-700) Calpain large subunit, C-term	5e-11
d1juoa_	172	a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId:	2e-10
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	3e-10
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	3e-07
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	0.001
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	3e-10
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	6e-10
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	3e-05
d1auib_	165	a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch	6e-10
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	8e-10
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	1e-04
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	1e-09
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	2e-05
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	2e-09
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	3e-04
d1omra_	201	a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId:	4e-09
d1omra_	201	a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId:	0.004
d1alva_	173	a.39.1.8 (A:) Calpain small (regulatory) subunit (	4e-09
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	5e-09
d1hqva_	181	a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous	7e-09
d1ggwa_	140	a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo	9e-09
d1y1xa_	182	a.39.1.8 (A:) Programmed cell death 6 protein-like	9e-09
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	2e-08
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	1e-04
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-08
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	9e-06
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	4e-08
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	1e-05
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	5e-08
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	9e-08
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	6e-08
d3c1va1	93	a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa	6e-08
d3c1va1	93	a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa	2e-04
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	7e-08
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	2e-05
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	9e-08
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	3e-07
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	1e-07
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	8e-05
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	2e-07
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	2e-07
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	2e-07
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	1e-06
d1yuta1	98	a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa	2e-07
d1yuta1	98	a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa	0.002
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	5e-07
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-06
d1ksoa_	93	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	5e-07
d1qx2a_	76	a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax	9e-07
d1qx2a_	76	a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax	0.002
d1xk4a1	87	a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa	1e-06
d1xo5a_	180	a.39.1.5 (A:) Calcium- and integrin-binding protei	1e-06
d1e8aa_	87	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	2e-06
d1k8ua_	89	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	2e-06
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	2e-06
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	6e-06
d1a4pa_	92	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	2e-06
d1a4pa_	92	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	7e-04
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	3e-06
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	3e-05
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	5e-06
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	0.001
d1zfsa1	93	a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no	7e-06
d1zfsa1	93	a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no	0.002
d1snla_	99	a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo	3e-05
d1snla_	99	a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo	0.004
d2jxca1	95	a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [	5e-05
d2jxca1	95	a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [	5e-04
d1c07a_	95	a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId:	6e-05
d1c07a_	95	a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId:	4e-04
d1qjta_	99	a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId:	8e-05
d1psra_	100	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	9e-05
d1wlza1	83	a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H	2e-04
d1fi6a_	92	a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId:	4e-04
d1fi6a_	92	a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId:	0.001
d2zkmx1	170	a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human	5e-04
d1qlsa_	95	a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa),	6e-04
d1xk4c1	83	a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sa	0.001
d3cr5x1	90	a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru	0.001
d1j55a_	94	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.002

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  221 bits (564), Expect = 3e-69
 Identities = 98/297 (32%), Positives = 146/297 (49%), Gaps = 33/297 (11%)

Query: 42  KAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTS-KSDEGYLKRE---- 96
           K  EDI+  +   + L  G    + L  +  T    A K I+K + +  EG ++ E    
Sbjct: 2   KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 61

Query: 97  --------------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALH 130
                                        GG L DRI ++  YTER A+ +   V++A+ 
Sbjct: 62  HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 121

Query: 131 ACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL 190
             H  GI+HRDLKPEN ++ + DE++ +  +DFGL+   + G V     GTP Y+APE+L
Sbjct: 122 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 181

Query: 191 GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK 250
               Y K +D WS G+I Y LL G  PF+ E+       I+  E +F S  W  IS SAK
Sbjct: 182 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 241

Query: 251 DLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKK 307
           D IR ++ +DP  + T  Q L+HPW+      A D+ I  ++  ++K+  A SK K+
Sbjct: 242 DFIRHLMEKDPEKRFTCEQALQHPWIA--GDTALDKNIHQSVSEQIKKNFAKSKWKQ 296

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  213 bits (543), Expect = 6e-66
 Identities = 82/301 (27%), Positives = 135/301 (44%), Gaps = 36/301 (11%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------- 88
           +++   + IAE+L RGE G ++ C E S+   +  K +                      
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH 60

Query: 89  -------------DEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHS 134
                        +E  +  E   G  + +RI+       ER   S    V  AL   HS
Sbjct: 61  RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS 120

Query: 135 NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCK 194
           + I H D++PEN I+ T   ++T+K  +FG A   + G  +  +   P Y APE+     
Sbjct: 121 HNIGHFDIRPENIIYQTRR-SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDV 179

Query: 195 YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR 254
                D+WS G ++Y LLSG  PF AE+    +  IM+ E  F  + +  IS  A D + 
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVD 239

Query: 255 RMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIV 314
           R+L+++  +++T ++ L+HPWL     +  +R + T +I  +K  R    L K  L ++V
Sbjct: 240 RLLVKERKSRMTASEALQHPWLK----QKIER-VSTKVIRTLKHRRYYHTLIKKDLNMVV 294

Query: 315 E 315
            
Sbjct: 295 S 295

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  210 bits (535), Expect = 2e-64
 Identities = 87/322 (27%), Positives = 140/322 (43%), Gaps = 33/322 (10%)

Query: 44  YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE------- 96
           ++ +  H+ I EEL  G  G ++  TE +TG  FA K +    +SD+  +++E       
Sbjct: 21  HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL 80

Query: 97  -----------------------HCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHAC 132
                                     GG L ++++D   + +E  A    R V   L   
Sbjct: 81  RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 140

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGP 192
           H N  +H DLKPEN I  T   +  LK  DFGL    +  +  +   GT  + APE+   
Sbjct: 141 HENNYVHLDLKPEN-IMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG 199

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
              G   D+WS G++ Y LLSG  PF  E+   TL  + S + +     +  IS   KD 
Sbjct: 200 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 259

Query: 253 IRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVK-QFRAMSKLKKLALK 311
           IR++L+ DPN ++T+ Q L+HPWL   N    D  I ++  ++++   +         L 
Sbjct: 260 IRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLP 319

Query: 312 VIVENLPAEEIQKHKETFKQMD 333
            +        ++KH+     + 
Sbjct: 320 PLGRISNYSSLRKHRPQEYSIR 341

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  203 bits (518), Expect = 7e-62
 Identities = 82/323 (25%), Positives = 135/323 (41%), Gaps = 52/323 (16%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE------------- 96
           ++ I EEL  G  G ++ C E +TG  F  K I+     D+  +K E             
Sbjct: 30  YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLI 89

Query: 97  -----------------HCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIM 138
                               GG L DRI+  + + +E    +  R     L   H + I+
Sbjct: 90  NLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV 149

Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           H D+KPEN I     + +++K  DFGLA      ++ +    T  + APE++     G  
Sbjct: 150 HLDIKPEN-IMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY 208

Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLI 258
            D+W+ G++ Y LLSG  PF  E    TL  +   + +F  D + ++S  AKD I+ +L 
Sbjct: 209 TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQ 268

Query: 259 RDPNNQITVAQILKHPWL--NYEN------------------GEAWDRPIDTAIISRVKQ 298
           ++P  ++TV   L+HPWL  ++ N                   +  D P     I R+  
Sbjct: 269 KEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIAN 328

Query: 299 FRAMSKLKKLALKVIVENLPAEE 321
           F ++ K +    ++       +E
Sbjct: 329 FSSLRKHRPQEYQIYDSYFDRKE 351

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  197 bits (503), Expect = 1e-60
 Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 49/273 (17%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
           ++   E L RG S  +  C    T  ++A K I  T                        
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 92  ----------------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
                                 +L  +    G L D ++++   +E+    + R+++  +
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 123

Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPEL 189
            A H   I+HRDLKPEN +    D++  +K TDFG +   + G+   EV GTP Y+APE+
Sbjct: 124 CALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 180

Query: 190 L------GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP 243
           +          YGKE+D+WS G+I+Y LL+G+ PFW       L  IMS    F S  W 
Sbjct: 181 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD 240

Query: 244 TISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
             S + KDL+ R L+  P  + T  + L HP+ 
Sbjct: 241 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 273

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (498), Expect = 5e-60
 Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 41/260 (15%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
            F I   L +G+ G +YL  E  +    A K + K      G                  
Sbjct: 7   DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 66

Query: 92  ---------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                          YL  E+   GT+   +    ++ E+  A+    + NAL  CHS  
Sbjct: 67  NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 126

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYG 196
           ++HRD+KPEN +  +  E   LK  DFG +      +    + GT  Y+ PE++    + 
Sbjct: 127 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 182

Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM 256
           +++D+WS G++ Y  L G  PF A +   T   I   E  F       ++  A+DLI R+
Sbjct: 183 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF----PDFVTEGARDLISRL 238

Query: 257 LIRDPNNQITVAQILKHPWL 276
           L  +P+ +  + ++L+HPW+
Sbjct: 239 LKHNPSQRPMLREVLEHPWI 258

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (491), Expect = 4e-58
 Identities = 88/310 (28%), Positives = 142/310 (45%), Gaps = 37/310 (11%)

Query: 53  IAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------ 88
            ++ L  G +G++       T  +FA K +    K+                        
Sbjct: 16  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYE 75

Query: 89  ------DEGYLKREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHR 140
                     +  E  DGG L  RI DR  + +TER A+ + +S+  A+   HS  I HR
Sbjct: 76  NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 135

Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEID 200
           D+KPEN ++T+   NA LK TDFG A              TP Y+APE+LGP KY K  D
Sbjct: 136 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 195

Query: 201 IWSAGLILYNLLSGAQPFWAES----LYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM 256
           +WS G+I+Y LL G  PF++        G  T I   + +F +  W  +S   K LIR +
Sbjct: 196 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 255

Query: 257 LIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVEN 316
           L  +P  ++T+ + + HPW+  ++ +    P+ T+ + +  + R     +++   +    
Sbjct: 256 LKTEPTQRMTITEFMNHPWIM-QSTKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMR 314

Query: 317 LPAEEIQKHK 326
           +  E+I+  K
Sbjct: 315 VDYEQIKIKK 324

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (477), Expect = 1e-56
 Identities = 84/287 (29%), Positives = 135/287 (47%), Gaps = 40/287 (13%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------- 91
           E++  ++   EEL  G+   +  C E STGLQ+A K I K                    
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 92  -----------------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNA 128
                                   L  E   GG L D ++++E  TE  A    + ++N 
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125

Query: 129 LHACHSNGIMHRDLKPENFIFTTDDE-NATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
           ++  HS  I H DLKPEN +    +     +K  DFGLA   + G  ++ + GTP ++AP
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185

Query: 188 ELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS 247
           E++     G E D+WS G+I Y LLSGA PF  ++   TL  + +   +F+ + +   S+
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA 245

Query: 248 SAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIIS 294
            AKD IRR+L++DP  ++T+   L+HPW+  ++     + + +A   
Sbjct: 246 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD---TQQALSSAWSH 289

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (472), Expect = 4e-56
 Identities = 71/263 (26%), Positives = 110/263 (41%), Gaps = 39/263 (14%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
            + + + L  G  G + L     T    A K +      D                    
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65

Query: 92  -------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIM 138
                        YL  E+C GG L DRI       E  A   F  ++  +   H  GI 
Sbjct: 66  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 125

Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFF---EEGKVYEEVVGTPLYMAPELLGPCKY 195
           HRD+KPEN +    D    LK +DFGLA  F      ++  ++ GT  Y+APELL   ++
Sbjct: 126 HRDIKPENLLLDERD---NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182

Query: 196 -GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR 254
             + +D+WS G++L  +L+G  P+   S      +   +E     +PW  I S+   L+ 
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLNPWKKIDSAPLALLH 241

Query: 255 RMLIRDPNNQITVAQILKHPWLN 277
           ++L+ +P+ +IT+  I K  W N
Sbjct: 242 KILVENPSARITIPDIKKDRWYN 264

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (470), Expect = 1e-55
 Identities = 70/297 (23%), Positives = 119/297 (40%), Gaps = 52/297 (17%)

Query: 44  YEDIKL------HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE- 96
           YE +         + I  EL  G  G++Y      T +  A K I   S+ +      E 
Sbjct: 1   YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 60

Query: 97  -----------------------------HCDGGTLVDRISDRER-YTERAAASVFRSVV 126
                                         C GG +   + + ER  TE     V +  +
Sbjct: 61  DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 120

Query: 127 NALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYM 185
           +AL+  H N I+HRDLK  N +F     +  +K  DFG++       +  +  +GTP +M
Sbjct: 121 DALNYLHDNKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWM 177

Query: 186 APELLGPC-----KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
           APE++         Y  + D+WS G+ L  +     P    +    L  I   E    + 
Sbjct: 178 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 237

Query: 241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVK 297
           P    SS+ KD +++ L ++ + + T +Q+L+HP++        ++PI   +I+  K
Sbjct: 238 P-SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT----VDSNKPIRE-LIAEAK 288

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (469), Expect = 2e-55
 Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 36/263 (13%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKRE-------- 96
            D K  +T  E++ +G SG +Y   + +TG + A + ++   +  +  +  E        
Sbjct: 16  GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75

Query: 97  ----------------------HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS 134
                                 +  GG+L D +       E   A+V R  + AL   HS
Sbjct: 76  NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHS 134

Query: 135 NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE-EGKVYEEVVGTPLYMAPELLGPC 193
           N ++HRD+K +N +      + ++K TDFG       E      +VGTP +MAPE++   
Sbjct: 135 NQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191

Query: 194 KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI 253
            YG ++DIWS G++   ++ G  P+  E+    L  I +     +      +S+  +D +
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSAIFRDFL 250

Query: 254 RRMLIRDPNNQITVAQILKHPWL 276
            R L  D   + +  ++L+H +L
Sbjct: 251 NRCLDMDVEKRGSAKELLQHQFL 273

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  184 bits (468), Expect = 4e-55
 Identities = 60/302 (19%), Positives = 107/302 (35%), Gaps = 46/302 (15%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR--------- 95
           +D +  F+   E+  G  G +Y   +       A K +S + K      +          
Sbjct: 11  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70

Query: 96  ------------------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHA 131
                                   E+C G         ++   E   A+V    +  L  
Sbjct: 71  KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 130

Query: 132 CHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL- 190
            HS+ ++HRD+K  N +     E   +K  DFG A        +   VGTP +MAPE++ 
Sbjct: 131 LHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANSF---VGTPYWMAPEVIL 184

Query: 191 --GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS 248
                +Y  ++D+WS G+    L     P +  +    L  I   E    +      S  
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE--SPALQSGHWSEY 242

Query: 249 AKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAM--SKLK 306
            ++ +   L + P ++ T   +LKH ++  E        +       V++   +   K+K
Sbjct: 243 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDNLQYRKMK 302

Query: 307 KL 308
           K+
Sbjct: 303 KI 304

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (462), Expect = 2e-54
 Identities = 65/270 (24%), Positives = 103/270 (38%), Gaps = 49/270 (18%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR-------------- 95
            F   + L  G    + L  E +T  ++A K + K     E  +                
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 96  -------------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                               +   G L+  I     + E         +V+AL   H  G
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFF---EEGKVYEEVVGTPLYMAPELLGPC 193
           I+HRDLKPEN +    +E+  ++ TDFG A       +       VGT  Y++PELL   
Sbjct: 129 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 185

Query: 194 KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI 253
              K  D+W+ G I+Y L++G  PF A + Y     I+  E DF           A+DL+
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF----PEKFFPKARDLV 241

Query: 254 RRMLIRDPNNQITVAQ------ILKHPWLN 277
            ++L+ D   ++   +      +  HP+  
Sbjct: 242 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (437), Expect = 5e-51
 Identities = 66/270 (24%), Positives = 100/270 (37%), Gaps = 50/270 (18%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           + +   +  G  GR       S G     K +   S ++                     
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 65

Query: 92  ---------------YLKREHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHAC 132
                          Y+  E+C+GG L   I+     R+   E     V   +  AL  C
Sbjct: 66  VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 125

Query: 133 H-----SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEVVGTPLYMA 186
           H      + ++HRDLKP N      D    +K  DFGLA     +    +  VGTP YM+
Sbjct: 126 HRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 182

Query: 187 PELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS 246
           PE +    Y ++ DIWS G +LY L +   PF A S       I   +           S
Sbjct: 183 PEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYRYS 239

Query: 247 SSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
               ++I RML     ++ +V +IL++P +
Sbjct: 240 DELNEIITRMLNLKDYHRPSVEEILENPLI 269

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (432), Expect = 3e-50
 Identities = 44/260 (16%), Positives = 91/260 (35%), Gaps = 43/260 (16%)

Query: 55  EELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG----------------------- 91
            E+ RG    +Y   +  T ++ A   +     +                          
Sbjct: 15  IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 74

Query: 92  -------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG-- 136
                         L  E    GTL   +   +    +   S  R ++  L   H+    
Sbjct: 75  DSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPP 134

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYG 196
           I+HRDLK +N          ++K  D GLA         + V+GTP +MAPE+    KY 
Sbjct: 135 IIHRDLKCDNIFI--TGPTGSVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMYEE-KYD 190

Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM 256
           + +D+++ G+ +  + +   P+        +   ++  +   +          K++I   
Sbjct: 191 ESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK-PASFDKVAIPEVKEIIEGC 249

Query: 257 LIRDPNNQITVAQILKHPWL 276
           + ++ + + ++  +L H + 
Sbjct: 250 IRQNKDERYSIKDLLNHAFF 269

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  166 bits (422), Expect = 9e-49
 Identities = 54/270 (20%), Positives = 94/270 (34%), Gaps = 38/270 (14%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR-------------- 95
            + + E L  G    ++L  +       A K +      D  +  R              
Sbjct: 8   RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 67

Query: 96  -----------------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHAC 132
                                  E+ DG TL D +      T + A  V      AL+  
Sbjct: 68  AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 127

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFG-LAFFFEEGKVYEEVVGTPLYMAPELLG 191
           H NGI+HRD+KP N + +  +    +       +A           V+GT  Y++PE   
Sbjct: 128 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 187

Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD 251
                   D++S G +LY +L+G  PF  +S        +  +    S     +S+    
Sbjct: 188 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDA 247

Query: 252 LIRRMLIRDPNNQITVAQILKHPWLNYENG 281
           ++ + L ++P N+   A  ++   +   NG
Sbjct: 248 VVLKALAKNPENRYQTAAEMRADLVRVHNG 277

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (421), Expect = 4e-48
 Identities = 65/305 (21%), Positives = 99/305 (32%), Gaps = 76/305 (24%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------- 88
            F    EL  G  G ++  +   +GL  A K I    K                      
Sbjct: 7   DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66

Query: 89  ----------DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGI 137
                      E  +  EH DGG+L   +    R  E+    V  +V+  L      + I
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGK 197
           MHRD+KP N +  +  E   +K  DFG++    +      V GT  YM+PE L    Y  
Sbjct: 127 MHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMANSFV-GTRSYMSPERLQGTHYSV 182

Query: 198 EIDIWSAGLILYNLLSGAQPFWAES-----------LYGTLTAIMSREI----------- 235
           + DIWS GL L  +  G  P                + G       R             
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242

Query: 236 ------------------DFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                                  P    S   +D + + LI++P  +  + Q++ H ++ 
Sbjct: 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302

Query: 278 YENGE 282
             + E
Sbjct: 303 RSDAE 307

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (415), Expect = 7e-48
 Identities = 68/267 (25%), Positives = 108/267 (40%), Gaps = 53/267 (19%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
            + +   L  G  G +Y     S  L  A K + K   SD G                  
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64

Query: 92  --------------------YLKREHCDGGT-LVDRISDRERYTERAAASVFRSVVNALH 130
                                L  E  +    L D I++R    E  A S F  V+ A+ 
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124

Query: 131 ACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELL 190
            CH+ G++HRD+K EN +   +     LK  DFG     ++   Y +  GT +Y  PE +
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWI 181

Query: 191 GPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA 249
              +Y G+   +WS G++LY+++ G  PF  +        I+  ++ F+      +SS  
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR----QRVSSEC 231

Query: 250 KDLIRRMLIRDPNNQITVAQILKHPWL 276
           + LIR  L   P+++ T  +I  HPW+
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWM 258

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (420), Expect = 9e-48
 Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 46/266 (17%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR-------------- 95
            F   + L +G  G++ L  E +TG  +A K + K     +  +                
Sbjct: 6   DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65

Query: 96  -------------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                              E+ +GG L   +S    +TE  A      +V+AL   HS  
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPELLGPCKY 195
           +++RD+K EN +    D++  +K TDFGL      +G   +   GTP Y+APE+L    Y
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR 255
           G+ +D W  G+++Y ++ G  PF+ +        I+  EI F      T+S  AK L+  
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF----PRTLSPEAKSLLAG 238

Query: 256 MLIRDPNNQI-----TVAQILKHPWL 276
           +L +DP  ++        ++++H + 
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (413), Expect = 6e-47
 Identities = 69/284 (24%), Positives = 115/284 (40%), Gaps = 44/284 (15%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR--------------- 95
           F + + L +G  G+++L     T   FA K++ K     +  ++                
Sbjct: 4   FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63

Query: 96  -------------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                              E+ +GG L+  I    ++    A      ++  L   HS G
Sbjct: 64  FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 123

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVYEEVVGTPLYMAPELLGPCKY 195
           I++RDLK +N +    D++  +K  DFG+      G        GTP Y+APE+L   KY
Sbjct: 124 IVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKY 180

Query: 196 GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR 255
              +D WS G++LY +L G  PF  +       +I      +       +   AKDL+ +
Sbjct: 181 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY----PRWLEKEAKDLLVK 236

Query: 256 MLIRDPNNQITVA-QILKHPWLNYENGEA-WDRPIDTAIISRVK 297
           + +R+P  ++ V   I +HP     N E    + ID     +VK
Sbjct: 237 LFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVK 280

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  161 bits (409), Expect = 2e-46
 Identities = 72/265 (27%), Positives = 111/265 (41%), Gaps = 47/265 (17%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR-------------- 95
            F I   L  G  GR++L      G  +A K + K        ++               
Sbjct: 5   DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 64

Query: 96  -------------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                              ++ +GG L   +   +R+    A      V  AL   HS  
Sbjct: 65  FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 124

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYG 196
           I++RDLKPEN +    D+N  +K TDFG A +  +  V   + GTP Y+APE++    Y 
Sbjct: 125 IIYRDLKPENILL---DKNGHIKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYN 179

Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM 256
           K ID WS G+++Y +L+G  PF+  +   T   I++ E+ F     P  +   KDL+ R+
Sbjct: 180 KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF----PPFFNEDVKDLLSRL 235

Query: 257 LIRDPNN-----QITVAQILKHPWL 276
           + RD +      Q     +  HPW 
Sbjct: 236 ITRDLSQRLGNLQNGTEDVKNHPWF 260

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  160 bits (405), Expect = 2e-45
 Identities = 59/269 (21%), Positives = 100/269 (37%), Gaps = 47/269 (17%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
            F++   + RG  G +Y C +  TG  +A K + K     +                   
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64

Query: 92  ------------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACH 133
                                 +  +GG L   +S    ++E         ++  L   H
Sbjct: 65  DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 124

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPE-LLGP 192
           +  +++RDLKP N +    DE+  ++ +D GLA  F + K +   VGT  YMAPE L   
Sbjct: 125 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPEVLQKG 180

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
             Y    D +S G +L+ LL G  PF           I    +    +   + S   + L
Sbjct: 181 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSFSPELRSL 239

Query: 253 IRRMLIRDPNNQITV-----AQILKHPWL 276
           +  +L RD N ++        ++ + P+ 
Sbjct: 240 LEGLLQRDVNRRLGCLGRGAQEVKESPFF 268

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (400), Expect = 2e-45
 Identities = 66/284 (23%), Positives = 93/284 (32%), Gaps = 64/284 (22%)

Query: 55  EELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------- 88
           + L  G+   +Y   + +T    A K I    +S                          
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 89  ---------DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
                        L  +  +    V    +    T     +     +  L   H + I+H
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 123

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVYEEVVGTPLYMAPELL-GPCKYGK 197
           RDLKP N +    DEN  LK  DFGLA  F    + Y   V T  Y APELL G   YG 
Sbjct: 124 RDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGV 180

Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP-------------- 243
            +D+W+ G IL  LL        +S    LT I         + WP              
Sbjct: 181 GVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSF 240

Query: 244 ----------TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                            DLI+ + + +P  +IT  Q LK  + +
Sbjct: 241 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 284

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (397), Expect = 3e-45
 Identities = 51/264 (19%), Positives = 99/264 (37%), Gaps = 46/264 (17%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
             T+ + +  G  G +Y    +      A K ++ T+ + +                   
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65

Query: 92  -------------YLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGI 137
                         +  + C+G +L   +   E ++       + R     +   H+  I
Sbjct: 66  ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPELL---G 191
           +HRDLK  N       E+ T+K  DFGLA           +E++ G+ L+MAPE++    
Sbjct: 126 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182

Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK--SDPWPTISSSA 249
              Y  + D+++ G++LY L++G  P+   +    +  ++ R       S        + 
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242

Query: 250 KDLIRRMLIRDPNNQITVAQILKH 273
           K L+   L +  + +    QIL  
Sbjct: 243 KRLMAECLKKKRDERPLFPQILAS 266

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (400), Expect = 7e-45
 Identities = 78/356 (21%), Positives = 118/356 (33%), Gaps = 87/356 (24%)

Query: 46  DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR---------- 95
           D+   +T    +  G  G +    +N   ++ A K IS      + Y +R          
Sbjct: 5   DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLR 62

Query: 96  ---------------------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNA 128
                                       H  G  L   +  +   +          ++  
Sbjct: 63  FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ-HLSNDHICYFLYQILRG 121

Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK----VYEEVVGTPLY 184
           L   HS  ++HRDLKP N +    +    LK  DFGLA   +          E V T  Y
Sbjct: 122 LKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 178

Query: 185 MAPELL-GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW- 242
            APE++     Y K IDIWS G IL  +LS    F  +     L  I+        +   
Sbjct: 179 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 238

Query: 243 --------------------------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                                     P   S A DL+ +ML  +P+ +I V Q L HP+L
Sbjct: 239 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 298

Query: 277 NYENGEAWDRPIDTAIISRVKQFRAMSK--LKKLALKVIVENLPAEEIQKHKETFK 330
             +  +  D PI  A      +   + K  LK+L           EE  + +  ++
Sbjct: 299 E-QYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIF---------EETARFQPGYR 344

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  154 bits (389), Expect = 3e-43
 Identities = 53/291 (18%), Positives = 88/291 (30%), Gaps = 63/291 (21%)

Query: 48  KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE----------------- 90
           ++ +T  + +  G  G +Y      +G   A K + +  +                    
Sbjct: 19  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 78

Query: 91  ---------------GYLKREHCDGG---TLVDRISDRERYTERAAASVFRSVVNALHAC 132
                            L  ++               ++             +  +L   
Sbjct: 79  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138

Query: 133 HSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP-ELLG 191
           HS GI HRD+KP+N +   D      K  DFG A     G+     + +  Y AP  + G
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVL--KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196

Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS------------------- 232
              Y   ID+WSAG +L  LL G   F  +S    L  I+                    
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256

Query: 233 ------REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                 +   +     P     A  L  R+L   P  ++T  +   H + +
Sbjct: 257 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (381), Expect = 2e-42
 Identities = 61/301 (20%), Positives = 98/301 (32%), Gaps = 77/301 (25%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
            +    ++ +G  G ++      TG + A K +   ++ +                    
Sbjct: 11  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 70

Query: 92  ----------------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNAL 129
                                 YL  + C+        +   ++T      V + ++N L
Sbjct: 71  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 130

Query: 130 HACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-----VYEEVVGTPLY 184
           +  H N I+HRD+K  N +      +  LK  DFGLA  F   K      Y   V T  Y
Sbjct: 131 YYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWY 187

Query: 185 MAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP 243
             PE LLG   YG  ID+W AG I+  + + +      +    L  I         + WP
Sbjct: 188 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 247

Query: 244 TI----------------------------SSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
            +                               A DLI ++L+ DP  +I     L H +
Sbjct: 248 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 307

Query: 276 L 276
            
Sbjct: 308 F 308

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (379), Expect = 2e-42
 Identities = 58/293 (19%), Positives = 91/293 (31%), Gaps = 68/293 (23%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQF-ACKSISKTSKSDEG----------------- 91
            +    E+  G  G+++   +   G +F A K +   +  +                   
Sbjct: 8   QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 67

Query: 92  -----------------------YLKREHCDGGTL-VDRISDRERYTERAAASVFRSVVN 127
                                   L  EH D                      +   ++ 
Sbjct: 68  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 127

Query: 128 ALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAP 187
            L   HS+ ++HRDLKP+N + T+  +    K  DFGLA  +        VV T  Y AP
Sbjct: 128 GLDFLHSHRVVHRDLKPQNILVTSSGQI---KLADFGLARIYSFQMALTSVVVTLWYRAP 184

Query: 188 ELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP---- 243
           E+L    Y   +D+WS G I   +      F   S    L  I+        + WP    
Sbjct: 185 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244

Query: 244 -------------------TISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                               I    KDL+ + L  +P  +I+    L HP+  
Sbjct: 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  149 bits (377), Expect = 5e-42
 Identities = 41/284 (14%), Positives = 90/284 (31%), Gaps = 46/284 (16%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------- 90
            + +  ++  G  G IYL T+ + G + A K     +K  +                   
Sbjct: 8   RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPT 67

Query: 91  ----------GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHR 140
                       +  E               +++ +    +   +++ +   HS   +HR
Sbjct: 68  IRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHR 127

Query: 141 DLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE--------EVVGTPLYMAPELLGP 192
           D+KP+NF+     +   +   DFGLA  + + + ++         + GT  Y +      
Sbjct: 128 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG 187

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP----WPTISSS 248
            +  +  D+ S G +L     G+ P+                    S P         S 
Sbjct: 188 IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSE 247

Query: 249 AKDLIRRMLIRDPNNQIT---VAQILKHPWLNYENGEAWDRPID 289
               +        +++     + Q+ ++ +     G ++D   D
Sbjct: 248 FATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR--QGFSYDYVFD 289

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  150 bits (379), Expect = 5e-42
 Identities = 55/291 (18%), Positives = 103/291 (35%), Gaps = 70/291 (24%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------- 87
            + +  +L RG+   ++     +   +   K +    K                      
Sbjct: 36  DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 95

Query: 88  --------SDEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
                   S    L  EH +           +  T+         ++ AL  CHS GIMH
Sbjct: 96  ADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMH 152

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPEL-LGPCKYGKE 198
           RD+KP N +   D E+  L+  D+GLA F+  G+ Y   V +  +  PEL +    Y   
Sbjct: 153 RDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 210

Query: 199 IDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREI----------------------- 235
           +D+WS G +L +++   +PF+           +++ +                       
Sbjct: 211 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 270

Query: 236 -----------DFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
                         S+    +S  A D + ++L  D  +++T  + ++HP+
Sbjct: 271 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 321

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (378), Expect = 6e-42
 Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 51/296 (17%)

Query: 50  HFTIAEELCRGESGRIYLC---TENSTGLQFACKSISKTSKSDEG--------------- 91
           +F + + L  G  G+++L    + + TG  +A K + K +   +                
Sbjct: 25  NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84

Query: 92  --------------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHA 131
                               +L  ++ +GG L   +S RER+TE         +V AL  
Sbjct: 85  IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEH 144

Query: 132 CHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE--EGKVYEEVVGTPLYMAPEL 189
            H  GI++RD+K EN +    D N  +  TDFGL+  F   E +   +  GT  YMAP++
Sbjct: 145 LHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 201

Query: 190 L--GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS 247
           +  G   + K +D WS G+++Y LL+GA PF  +    +   I  R +  +      +S+
Sbjct: 202 VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA 261

Query: 248 SAKDLIRRMLIRDPNNQI-----TVAQILKHPWLNYENGEA-WDRPIDTAIISRVK 297
            AKDLI+R+L++DP  ++        +I +H +    N +    + +       ++
Sbjct: 262 LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIR 317

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (366), Expect = 1e-40
 Identities = 66/288 (22%), Positives = 97/288 (33%), Gaps = 63/288 (21%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
           +F   E++  G  G +Y      TG   A K I   ++++                    
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 92  --------------YLKREHCDGGTL-VDRISDRERYTERAAASVFRSVVNALHACHSNG 136
                         YL  E            S           S    ++  L  CHS+ 
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122

Query: 137 IMHRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEVVGTPLYMAPELLGPCKY 195
           ++HRDLKP+N +    +    +K  DFGLA  F    + Y   V T  Y APE+L  CKY
Sbjct: 123 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179

Query: 196 -GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPW------------ 242
               +DIWS G I   +++    F  +S    L  I           W            
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239

Query: 243 -------------PTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                        P +    + L+ +ML  DPN +I+    L HP+  
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  144 bits (363), Expect = 3e-40
 Identities = 72/285 (25%), Positives = 101/285 (35%), Gaps = 63/285 (22%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------- 91
           +   E++  G  G +Y   +N+ G  FA K I    + +                     
Sbjct: 4   YHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62

Query: 92  -------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIM 138
                         L  EH D                  A S    ++N +  CH   ++
Sbjct: 63  VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122

Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFF-EEGKVYEEVVGTPLYMAPE-LLGPCKYG 196
           HRDLKP+N +   + E   LK  DFGLA  F    + Y   + T  Y AP+ L+G  KY 
Sbjct: 123 HRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179

Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI----------- 245
             IDIWS G I   +++G   F   S    L  I        S  WP +           
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239

Query: 246 --------------SSSAKDLIRRMLIRDPNNQITVAQILKHPWL 276
                           S  DL+ +ML  DPN +IT  Q L+H + 
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (363), Expect = 1e-39
 Identities = 66/342 (19%), Positives = 120/342 (35%), Gaps = 73/342 (21%)

Query: 40  LGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------- 89
           + K   +++  +   + +  G  G +    +  TG + A K + +  +S+          
Sbjct: 9   VTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYREL 68

Query: 90  ----------------------------EGYLKREHCDGGTLVDRISDRERYTERAAASV 121
                                       + YL       GT + ++   E+  E     +
Sbjct: 69  RLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFL 126

Query: 122 FRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGT 181
              ++  L   H+ GI+HRDLKP N      +E+  LK  DFGLA   +        V T
Sbjct: 127 VYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQADS--EMTGYVVT 181

Query: 182 PLYMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD 240
             Y APE +L   +Y + +DIWS G I+  +++G   F        L  IM       ++
Sbjct: 182 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE 241

Query: 241 PW---------------------------PTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
                                           S  A +L+ +ML+ D   ++T  + L H
Sbjct: 242 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301

Query: 274 PWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLALKVIVE 315
           P+    +    +  +     S     R + + K++  K ++ 
Sbjct: 302 PYFESLHDTEDEPQVQKYDDSFDDVDRTLDEWKRVTYKEVLS 343

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  144 bits (363), Expect = 1e-39
 Identities = 70/327 (21%), Positives = 124/327 (37%), Gaps = 49/327 (14%)

Query: 11  SDSAAQQQQQTPQLHVHVYDDDDDDDDTILGKAYEDIKL-HFTIAEELCRGESGRIYLCT 69
           + +AA++  +   +   +    +D        +    +L  F   + L  G  GR+ L  
Sbjct: 2   NAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61

Query: 70  ENSTGLQFACKSISKTSKSDEGYLKRE--------------------------------- 96
              +G  +A K + K        ++                                   
Sbjct: 62  HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121

Query: 97  HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENA 156
           +  GG +   +    R++E  A      +V      HS  +++RDLKPEN +        
Sbjct: 122 YVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--- 178

Query: 157 TLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQ 216
            ++ TDFG A   +       + GTP  +APE++    Y K +D W+ G+++Y + +G  
Sbjct: 179 YIQVTDFGFAKRVKGR--TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236

Query: 217 PFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDP-----NNQITVAQIL 271
           PF+A+        I+S ++ F        SS  KDL+R +L  D      N +  V  I 
Sbjct: 237 PFFADQPIQIYEKIVSGKVRF----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK 292

Query: 272 KHPWLNYENGEA-WDRPIDTAIISRVK 297
            H W    +  A + R ++   I + K
Sbjct: 293 NHKWFATTDWIAIYQRKVEAPFIPKFK 319

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (357), Expect = 2e-39
 Identities = 62/288 (21%), Positives = 100/288 (34%), Gaps = 65/288 (22%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGYLKR--------------- 95
           +   E++  G  G ++      T    A K +      DEG                   
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRL-DDDDEGVPSSALREICLLKELKHKN 62

Query: 96  ------------------EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGI 137
                             E CD        S           S    ++  L  CHS  +
Sbjct: 63  IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122

Query: 138 MHRDLKPENFIFTTDDENATLKATDFGLA-FFFEEGKVYEEVVGTPLYMAPELLGPCK-Y 195
           +HRDLKP+N +   + E    K  +FGLA  F    + Y   V T  Y  P++L   K Y
Sbjct: 123 LHRDLKPQNLLINRNGEL---KLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179

Query: 196 GKEIDIWSAGLILYNLLSGAQP-FWAESLYGTLTAIMSREIDFKSDPWPT---------- 244
              ID+WSAG I   L +  +P F    +   L  I         + WP+          
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239

Query: 245 ---------------ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
                          ++++ +DL++ +L  +P  +I+  + L+HP+ +
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (353), Expect = 4e-38
 Identities = 69/313 (22%), Positives = 109/313 (34%), Gaps = 70/313 (22%)

Query: 40  LGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEGY--LKRE- 96
           L K   ++   +     +  G  G +    +  TGL+ A K +S+  +S        RE 
Sbjct: 9   LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 68

Query: 97  ---------------------------------HCDGGTLVDRISDRERYTERAAASVFR 123
                                                G  ++ I   ++ T+     +  
Sbjct: 69  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 128

Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPL 183
            ++  L   HS  I+HRDLKP N      +E+  LK  DFGLA            V T  
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHT--DDEMTGYVATRW 183

Query: 184 YMAPE-LLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK---- 238
           Y APE +L    Y + +DIWS G I+  LL+G   F        L  I+           
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243

Query: 239 -----------------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPW 275
                                  ++ +   +  A DL+ +ML+ D + +IT AQ L H +
Sbjct: 244 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303

Query: 276 LNYENGEAWDRPI 288
              +  +  D P+
Sbjct: 304 FA-QYHDPDDEPV 315

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (346), Expect = 5e-38
 Identities = 48/256 (18%), Positives = 88/256 (34%), Gaps = 42/256 (16%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------- 90
              + + + +GE G + L      G + A K I   + +                     
Sbjct: 8   ELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQL 65

Query: 91  ----------GYLKREHCDGGTLVDRISDRER--YTERAAASVFRSVVNALHACHSNGIM 138
                      Y+  E+   G+LVD +  R R              V  A+     N  +
Sbjct: 66  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 125

Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKE 198
           HRDL   N +     E+   K +DFGL       +  +       + APE L   K+  +
Sbjct: 126 HRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTK 180

Query: 199 IDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
            D+WS G++L+ + S G  P+    L   +  +      +K D       +  ++++   
Sbjct: 181 SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK---GYKMDAPDGCPPAVYEVMKNCW 237

Query: 258 IRDPNNQITVAQILKH 273
             D   + +  Q+ + 
Sbjct: 238 HLDAAMRPSFLQLREQ 253

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (346), Expect = 8e-38
 Identities = 42/266 (15%), Positives = 79/266 (29%), Gaps = 47/266 (17%)

Query: 56  ELCRGESGRIYLCT--ENSTGLQFACKSISKTSKS------------------------- 88
           EL  G  G +              A K +   +                           
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73

Query: 89  ------DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDL 142
                 +   L  E  + G L   +       ++    +   V   +     +  +HRDL
Sbjct: 74  IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 133

Query: 143 KPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE----VVGTPLYMAPELLGPCKYGKE 198
              N +  T       K +DFGL+      + Y +          + APE +   K+  +
Sbjct: 134 AARNVLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 190

Query: 199 IDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
            D+WS G++++   S G +P+           +   E   +            DL+    
Sbjct: 191 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE---RMGCPAGCPREMYDLMNLCW 247

Query: 258 IRDPNNQITVAQI---LKHPWLNYEN 280
             D  N+   A +   L++ + +  N
Sbjct: 248 TYDVENRPGFAAVELRLRNYYYDVVN 273

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (343), Expect = 3e-37
 Identities = 45/262 (17%), Positives = 92/262 (35%), Gaps = 40/262 (15%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
              +  +L +G  G +++ T N T  + A K++   + S E                   
Sbjct: 18  SLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 76

Query: 92  ----------YLKREHCDGGTLVDRISDRER--YTERAAASVFRSVVNALHACHSNGIMH 139
                     Y+  E+   G+L+D +               +   + + +        +H
Sbjct: 77  LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 136

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY--EEVVGTPLYMAPELLGPCKYGK 197
           RDL+  N +     EN   K  DFGLA   E+ +    +       + APE     ++  
Sbjct: 137 RDLRAANILV---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 193

Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           + D+WS G++L  L +  +  +   +   +   + R   ++    P    S  DL+ +  
Sbjct: 194 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER--GYRMPCPPECPESLHDLMCQCW 251

Query: 258 IRDPNNQITVAQILK--HPWLN 277
            ++P  + T   +      +  
Sbjct: 252 RKEPEERPTFEYLQAFLEDYFT 273

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 5e-37
 Identities = 46/271 (16%), Positives = 82/271 (30%), Gaps = 48/271 (17%)

Query: 50  HFTIAE-ELCRGESGRIYLCT--ENSTGLQFACKSISKTSKSDEG--------------- 91
           +  IA+ EL  G  G +           +  A K + + ++  +                
Sbjct: 9   NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 68

Query: 92  ---------------YLKREHCDGGTLVDRI-SDRERYTERAAASVFRSVVNALHACHSN 135
                           L  E   GG L   +   RE       A +   V   +      
Sbjct: 69  PYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK 128

Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE----VVGTPLYMAPELLG 191
             +HRDL   N +          K +DFGL+        Y            + APE + 
Sbjct: 129 NFVHRDLAARNVLL---VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 185

Query: 192 PCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK 250
             K+    D+WS G+ ++  LS G +P+        +  I   +   + +  P       
Sbjct: 186 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK---RMECPPECPPELY 242

Query: 251 DLIRRMLIRDPNNQIT---VAQILKHPWLNY 278
            L+    I    ++     V Q ++  + + 
Sbjct: 243 ALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 273

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 2e-36
 Identities = 42/256 (16%), Positives = 90/256 (35%), Gaps = 38/256 (14%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
             T  +E+  G+ G ++L        + A K+I + + S+E                   
Sbjct: 6   ELTFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 64

Query: 92  -----------YLKREHCDGGTLVD-RISDRERYTERAAASVFRSVVNALHACHSNGIMH 139
                       L  E  + G L D   + R  +       +   V   +       ++H
Sbjct: 65  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 124

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE--VVGTPLYMAPELLGPCKYGK 197
           RDL   N +     EN  +K +DFG+  F  + +            + +PE+    +Y  
Sbjct: 125 RDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181

Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           + D+WS G++++ + S  +  +       +   +S    F+       S+    ++    
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST--GFRLYKPRLASTHVYQIMNHCW 239

Query: 258 IRDPNNQITVAQILKH 273
              P ++   +++L+ 
Sbjct: 240 KERPEDRPAFSRLLRQ 255

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 2e-36
 Identities = 56/304 (18%), Positives = 95/304 (31%), Gaps = 82/304 (26%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
            +   + +  G  G +    +       A K +S+  ++                     
Sbjct: 18  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77

Query: 92  --------------------YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHA 131
                               YL  E  D          +        + +   ++  +  
Sbjct: 78  IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKH 134

Query: 132 CHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLG 191
            HS GI+HRDLKP N +  +D      K  DFGLA       +    V T  Y APE++ 
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDCTL---KILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 191

Query: 192 PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMS------------------- 232
              Y + +DIWS G I+  ++     F           ++                    
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251

Query: 233 -------------------REIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
                                    S+     +S A+DL+ +ML+ DP  +I+V   L+H
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311

Query: 274 PWLN 277
           P++N
Sbjct: 312 PYIN 315

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  132 bits (332), Expect = 1e-35
 Identities = 43/256 (16%), Positives = 92/256 (35%), Gaps = 38/256 (14%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
             T+  +L  G+ G +Y        L  A K++ + +   E                   
Sbjct: 18  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 77

Query: 92  -----------YLKREHCDGGTLVDRISDRERY--TERAAASVFRSVVNALHACHSNGIM 138
                      Y+  E    G L+D + +  R   +      +   + +A+        +
Sbjct: 78  LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 137

Query: 139 HRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--VYEEVVGTPLYMAPELLGPCKYG 196
           HRDL   N +     EN  +K  DFGL+          +        + APE L   K+ 
Sbjct: 138 HRDLAARNCLV---GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 194

Query: 197 KEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM 256
            + D+W+ G++L+ + +     +       +  ++ +  D++ +          +L+R  
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK--DYRMERPEGCPEKVYELMRAC 252

Query: 257 LIRDPNNQITVAQILK 272
              +P+++ + A+I +
Sbjct: 253 WQWNPSDRPSFAEIHQ 268

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (332), Expect = 1e-35
 Identities = 49/274 (17%), Positives = 84/274 (30%), Gaps = 57/274 (20%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQF--ACKSISKTSKSDE------------------ 90
               + +  G  G++        GL+   A K + + +  D+                  
Sbjct: 12  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 71

Query: 91  --------------GYLKREHCDGGTLVDRI----------------SDRERYTERAAAS 120
                          YL  E+   G L+D +                S     + +    
Sbjct: 72  NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131

Query: 121 VFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEVVG 180
               V   +        +HRDL   N +     EN   K  DFGL+   E          
Sbjct: 132 FAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVKKTMGRL 188

Query: 181 TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKS 239
              +MA E L    Y    D+WS G++L+ ++S G  P+   +       +      ++ 
Sbjct: 189 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ---GYRL 245

Query: 240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
           +          DL+R+     P  + + AQIL  
Sbjct: 246 EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (325), Expect = 5e-35
 Identities = 43/257 (16%), Positives = 90/257 (35%), Gaps = 40/257 (15%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------- 90
             T  +EL  G+ G +            A K I + S S++                   
Sbjct: 5   DLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 63

Query: 91  ----------GYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMH 139
                      ++  E+   G L++ + +   R+  +    + + V  A+    S   +H
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 123

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE--VVGTPLYMAPELLGPCKYGK 197
           RDL   N +    ++   +K +DFGL+ +  + +            +  PE+L   K+  
Sbjct: 124 RDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 180

Query: 198 EIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM 256
           + DIW+ G++++ + S G  P+   +   T   I       +       S     ++   
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ---GLRLYRPHLASEKVYTIMYSC 237

Query: 257 LIRDPNNQITVAQILKH 273
                + + T   +L +
Sbjct: 238 WHEKADERPTFKILLSN 254

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (324), Expect = 8e-35
 Identities = 41/265 (15%), Positives = 76/265 (28%), Gaps = 46/265 (17%)

Query: 50  HFTIAEELCRGESGRIYLCT---ENSTGLQFACKSISKTSKSDEGYLKR----------- 95
              + E+L  G  G +        +   +  A K +     S    +             
Sbjct: 9   DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68

Query: 96  ---------------------EHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACH 133
                                E    G+L+DR+   +  +     +     V   +    
Sbjct: 69  DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY----EEVVGTPLYMAPEL 189
           S   +HRDL   N +  T D    +K  DFGL     +   +    E       + APE 
Sbjct: 129 SKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185

Query: 190 LGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSS 248
           L    +    D W  G+ L+ + + G +P+   +    L  I                  
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL--PRPEDCPQD 243

Query: 249 AKDLIRRMLIRDPNNQITVAQILKH 273
             +++ +     P ++ T   +   
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDF 268

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (321), Expect = 2e-34
 Identities = 43/255 (16%), Positives = 88/255 (34%), Gaps = 38/255 (14%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------ 91
              + E L  G+ G +++   N    + A KS+ + S S +                   
Sbjct: 14  TLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72

Query: 92  ----------YLKREHCDGGTLVDRISDRE--RYTERAAASVFRSVVNALHACHSNGIMH 139
                     Y+  E+ + G+LVD +      + T      +   +   +        +H
Sbjct: 73  LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132

Query: 140 RDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY--EEVVGTPLYMAPELLGPCKYGK 197
           RDL+  N +     +  + K  DFGLA   E+ +    E       + APE +    +  
Sbjct: 133 RDLRAANILV---SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 189

Query: 198 EIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRML 257
           + D+WS G++L  +++  +  +       +   + R   ++             L+R   
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER--GYRMVRPDNCPEELYQLMRLCW 247

Query: 258 IRDPNNQITVAQILK 272
              P ++ T   +  
Sbjct: 248 KERPEDRPTFDYLRS 262

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  127 bits (321), Expect = 4e-34
 Identities = 46/266 (17%), Positives = 89/266 (33%), Gaps = 48/266 (18%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS--------------------- 88
              I + +  GE G +        G +    +I                           
Sbjct: 27  CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 86

Query: 89  -------------DEGYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHS 134
                            +  E  + G+L   +   + ++T      + R +   +     
Sbjct: 87  PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD 146

Query: 135 NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEEV------VGTPLYMAPE 188
              +HRDL   N +    + N   K +DFGL+ F E+                  + APE
Sbjct: 147 MNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 203

Query: 189 LLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS 247
            +   K+    D+WS G++++ ++S G +P+W  +    + AI     D++  P     S
Sbjct: 204 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ---DYRLPPPMDCPS 260

Query: 248 SAKDLIRRMLIRDPNNQITVAQILKH 273
           +   L+     +D N++    QI+  
Sbjct: 261 ALHQLMLDCWQKDRNHRPKFGQIVNT 286

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 5e-33
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 43/261 (16%)

Query: 50  HFTIAEELCRGESGRIYLCT---ENSTGLQFACKSISKTSKSDE---------------- 90
              +   +  G+ G ++        +  L  A K+    +                    
Sbjct: 8   RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 67

Query: 91  --------------GYLKREHCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSN 135
                          ++  E C  G L   +  R+      +       +  AL    S 
Sbjct: 68  PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 127

Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE--EVVGTPLYMAPELLGPC 193
             +HRD+   N +      N  +K  DFGL+ + E+   Y+  +      +MAPE +   
Sbjct: 128 RFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184

Query: 194 KYGKEIDIWSAGLILYNLL-SGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
           ++    D+W  G+ ++ +L  G +PF        +  I + E   +    P    +   L
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYSL 241

Query: 253 IRRMLIRDPNNQITVAQILKH 273
           + +    DP+ +    ++   
Sbjct: 242 MTKCWAYDPSRRPRFTELKAQ 262

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  124 bits (311), Expect = 8e-33
 Identities = 33/266 (12%), Positives = 76/266 (28%), Gaps = 43/266 (16%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------- 90
           H+ +   +  G  G I+  T      Q A K   + S + +                   
Sbjct: 6   HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPN 65

Query: 91  ----------GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHR 140
                       L  +               +++ +  A   + ++  + + H   +++R
Sbjct: 66  VYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYR 125

Query: 141 DLKPENFIFTTDDE--NATLKATDFGLAFFFEEG--------KVYEEVVGTPLYMAPELL 190
           D+KP+NF+    +      +   DFG+  F+ +         +  + + GT  YM+    
Sbjct: 126 DIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTH 185

Query: 191 GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP----WPTIS 246
              +  +  D+ + G +    L G+ P+                   +S P         
Sbjct: 186 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFP 245

Query: 247 SSAKDLIRRMLIRDPNNQITVAQILK 272
                 +        +       +  
Sbjct: 246 EEFYKYMHYARNLAFDATPDYDYLQG 271

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (313), Expect = 1e-32
 Identities = 47/288 (16%), Positives = 84/288 (29%), Gaps = 69/288 (23%)

Query: 50  HFTIAEELCRGESGRIYLCT-----ENSTGLQFACKSISKTSKSDEG------------- 91
           +    + L  G  G++   T     +    +Q A K + + + S E              
Sbjct: 38  NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 97

Query: 92  -------------------YLKREHCDGGTLVDRISDRER-------------------- 112
                              YL  E+C  G L++ +  +                      
Sbjct: 98  GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 157

Query: 113 ---YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF 169
               T          V   +        +HRDL   N +  T  +   +   DFGLA   
Sbjct: 158 LNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN-VLVTHGKVVKI--CDFGLARDI 214

Query: 170 EEGK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYG 225
                  V         +MAPE L    Y  + D+WS G++L+ + S G  P+    +  
Sbjct: 215 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 274

Query: 226 TLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
               ++     FK D     +     +++     D   + +   +   
Sbjct: 275 NFYKLIQN--GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (311), Expect = 1e-32
 Identities = 36/261 (13%), Positives = 83/261 (31%), Gaps = 43/261 (16%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------- 87
           F   + L  G  G +Y       G +       K  +                       
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 88  -----------SDEGYLKREHCDGGTLVDRISDRER-YTERAAASVFRSVVNALHACHSN 135
                      +    L  +    G L+D + + +     +   +    +   ++     
Sbjct: 71  PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 130

Query: 136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY---EEVVGTPLYMAPELLGP 192
            ++HRDL   N +         +K TDFGLA      +     E       +MA E +  
Sbjct: 131 RLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187

Query: 193 CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDL 252
             Y  + D+WS G+ ++ L++     +       +++I+ +    +    P  +     +
Sbjct: 188 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK--GERLPQPPICTIDVYMI 245

Query: 253 IRRMLIRDPNNQITVAQILKH 273
           + +  + D +++    +++  
Sbjct: 246 MVKCWMIDADSRPKFRELIIE 266

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  122 bits (306), Expect = 5e-32
 Identities = 43/287 (14%), Positives = 85/287 (29%), Gaps = 70/287 (24%)

Query: 50  HFTIAEELCRGESGRIYLCT-----ENSTGLQFACKSISKTSKSD--------------- 89
           +     ++  G  GR++                A K + + + +D               
Sbjct: 14  NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 73

Query: 90  ----------------EGYLKREHCDGGTLVDRISDRERY-------------------- 113
                              L  E+   G L + +     +                    
Sbjct: 74  DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 133

Query: 114 ----TERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFF 169
               +      + R V   +        +HRDL   N +     EN  +K  DFGL+   
Sbjct: 134 PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLSRNI 190

Query: 170 EEGKVYEE---VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYG 225
                Y+          +M PE +   +Y  E D+W+ G++L+ + S G QP++  +   
Sbjct: 191 YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE 250

Query: 226 TLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
            +  +    I               +L+R    + P ++ +   I +
Sbjct: 251 VIYYVRDGNI---LACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 1e-30
 Identities = 39/279 (13%), Positives = 81/279 (29%), Gaps = 57/279 (20%)

Query: 50  HFTIAEELCRGESGRIYLCTENST-------GLQFACKSISKTSKSDE------------ 90
              + + L  G  G++ L               + A K +   +   +            
Sbjct: 14  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73

Query: 91  --------------------GYLKREHCDGGTLVDRI----------------SDRERYT 114
                                Y+  E+   G L + +                +  E+ +
Sbjct: 74  MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 133

Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
            +   S    V   +    S   +HRDL   N + T D+                +  K 
Sbjct: 134 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193

Query: 175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE 234
                    +MAPE L    Y  + D+WS G++L+ + +     +       L  ++   
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE- 252

Query: 235 IDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
              + D     ++    ++R      P+ + T  Q+++ 
Sbjct: 253 -GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 7e-30
 Identities = 45/271 (16%), Positives = 90/271 (33%), Gaps = 50/271 (18%)

Query: 45  EDIKLHFTIAEELCRGESGRIYLCT---ENSTGLQFACKSISKTSKSDE----------- 90
             + +HF   E + RG  G +Y  T    +   +  A KS+++ +   E           
Sbjct: 25  SSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 82

Query: 91  ---------------------GYLKREHCDGGTLVD-RISDRERYTERAAASVFRSVVNA 128
                                  +   +   G L +   ++    T +        V   
Sbjct: 83  KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 142

Query: 129 LHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE-----VVGTPL 183
           +    S   +HRDL   N +    DE  T+K  DFGLA    + +               
Sbjct: 143 MKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 199

Query: 184 YMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWP 243
           +MA E L   K+  + D+WS G++L+ L++   P + +        I    +  +    P
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV---NTFDITVYLLQGRRLLQP 256

Query: 244 -TISSSAKDLIRRMLIRDPNNQITVAQILKH 273
                   +++ +        + + ++++  
Sbjct: 257 EYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (285), Expect = 3e-29
 Identities = 37/263 (14%), Positives = 88/263 (33%), Gaps = 45/263 (17%)

Query: 50  HFTIAEELCRGESGRIYLCTENSTGLQ----FACKSISKTSKSDEG-------------- 91
             T  + +  GE G +Y     ++  +     A K++       +               
Sbjct: 8   CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 67

Query: 92  -----------------YLKREHCDGGTLVDRISDRERY-TERAAASVFRSVVNALHACH 133
                             +  E+ + G L   + +++   +      + R +   +    
Sbjct: 68  HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA 127

Query: 134 SNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY----EEVVGTPLYMAPEL 189
           +   +HRDL   N +    + N   K +DFGL+   E+                + APE 
Sbjct: 128 NMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 184

Query: 190 LGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA 249
           +   K+    D+WS G++++ +++  +  + E     +   ++    F+        S+ 
Sbjct: 185 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND--GFRLPTPMDCPSAI 242

Query: 250 KDLIRRMLIRDPNNQITVAQILK 272
             L+ +   ++   +   A I+ 
Sbjct: 243 YQLMMQCWQQERARRPKFADIVS 265

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (284), Expect = 6e-29
 Identities = 49/282 (17%), Positives = 84/282 (29%), Gaps = 64/282 (22%)

Query: 50  HFTIAEELCRGESGRIYLCT-----ENSTGLQFACKSISKTSKSDEG------------- 91
             +  + L  G  G++   T     ++   +  A K +  ++   E              
Sbjct: 24  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83

Query: 92  -------------------YLKREHCDGGTLVDRI------------------SDRERYT 114
                               +  E+C  G L++ +                   D     
Sbjct: 84  GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143

Query: 115 ERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV 174
                S    V   +    S   +HRDL   N + T        K  DFGLA   +    
Sbjct: 144 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKNDSN 200

Query: 175 YE---EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQP-FWAESLYGTLTAI 230
           Y           +MAPE +  C Y  E D+WS G+ L+ L S     +    +      +
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260

Query: 231 MSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
           +       S       +   D+++     DP  + T  QI++
Sbjct: 261 IKEGFRMLSPEH--APAEMYDIMKTCWDADPLKRPTFKQIVQ 300

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 8e-29
 Identities = 45/274 (16%), Positives = 93/274 (33%), Gaps = 56/274 (20%)

Query: 50  HFTIAEELCRGESGRIYLCT-----ENSTGLQFACKSISKTSKSDEG------------- 91
             T++ EL +G  G +Y        ++    + A K++++ +   E              
Sbjct: 21  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 80

Query: 92  ------------------YLKREHCDGGTLVDRISDRER----------YTERAAASVFR 123
                              +  E    G L   +                +      +  
Sbjct: 81  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 140

Query: 124 SVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYE---EVVG 180
            + + +   ++N  +HRDL   N +     E+ T+K  DFG+     E   Y    + + 
Sbjct: 141 EIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 197

Query: 181 TPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQ-PFWAESLYGTLTAIMSREIDFKS 239
              +M+PE L    +    D+WS G++L+ + + A+ P+   S    L  +M   +    
Sbjct: 198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL--- 254

Query: 240 DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
           D          +L+R     +P  + +  +I+  
Sbjct: 255 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 288

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (282), Expect = 1e-28
 Identities = 44/282 (15%), Positives = 85/282 (30%), Gaps = 63/282 (22%)

Query: 50  HFTIAEELCRGESGRIYLCT-----ENSTGLQFACKSISKTSKSDEG------------- 91
              + + L RG  G++         + +T    A K + + +   E              
Sbjct: 14  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73

Query: 92  --------------------YLKREHCDGGTLVDRISDRERY----------------TE 115
                                +  E C  G L   +  +                   T 
Sbjct: 74  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 133

Query: 116 RAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY 175
                    V   +    S   +HRDL   N +     E   +K  DFGLA    +   Y
Sbjct: 134 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDY 190

Query: 176 EE---VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG-AQPFWAESLYGTLTAIM 231
                      +MAPE +    Y  + D+WS G++L+ + S  A P+    +       +
Sbjct: 191 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 250

Query: 232 SREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH 273
                 ++  +   +      +      +P+ + T +++++H
Sbjct: 251 KEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  111 bits (277), Expect = 1e-27
 Identities = 48/329 (14%), Positives = 92/329 (27%), Gaps = 93/329 (28%)

Query: 40  LGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------- 90
            G+ Y+D +  + +  +L  G    ++L  +       A K +       E         
Sbjct: 6   KGEPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLL 63

Query: 91  ------------------------------------GYLKREHCDGGTLVDRISDRERYT 114
                                                 +     +    + +  +     
Sbjct: 64  QRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIP 123

Query: 115 ERAAASVFRSVVNAL-HACHSNGIMHRDLKPENFIFTTDDENATL-KATDFGLAFFFEEG 172
                 + + ++  L +     GI+H D+KPEN +    D    L +     L       
Sbjct: 124 LIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD 183

Query: 173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAES---------- 222
           + Y   + T  Y +PE+L    +G   DIWS   +++ L++G   F  +           
Sbjct: 184 EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 243

Query: 223 ------LYGTLTAIMSREIDFKSDPW----------------------------PTISSS 248
                 L G L + + R   +    +                               +  
Sbjct: 244 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKE 303

Query: 249 AKDLIRRMLIRDPNNQITVAQILKHPWLN 277
             D +  ML  DP  +     ++ HPWL 
Sbjct: 304 ISDFLSPMLQLDPRKRADAGGLVNHPWLK 332

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 2e-26
 Identities = 50/292 (17%), Positives = 89/292 (30%), Gaps = 76/292 (26%)

Query: 51  FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------- 89
             + E + +G  G ++       G + A K  S   +                       
Sbjct: 5   IVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 62

Query: 90  ------------EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS--- 134
                       + +L  ++ + G+L D + +R   T      +  S  + L   H    
Sbjct: 63  IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIV 121

Query: 135 -----NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE-----VVGTPLY 184
                  I HRDLK +N +     +N T    D GLA   +      +      VGT  Y
Sbjct: 122 GTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178

Query: 185 MAPELL------GPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYG-----------TL 227
           MAPE+L         +  K  DI++ GL+ + +            Y            ++
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238

Query: 228 TAIMSREIDFKSDP-------WPTISSSAKDLIRRMLIRDPNNQITVAQILK 272
             +     + K  P                 ++R     +   ++T  +I K
Sbjct: 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 75.8 bits (185), Expect = 7e-17
 Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 7/153 (4%)

Query: 311 KVIVENLPAEEIQKHKETFKQMDTND-SGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAAD 369
           K  VE L  E+  + K  F         G+++  E    +  LG   T  ++++ +   D
Sbjct: 2   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 61

Query: 370 IDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMI-----SIYITADELEAAFKEYN 424
            DG+GT      +     S+KD +       +     +       YI  +EL+   +   
Sbjct: 62  EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 121

Query: 425 MG-DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
               +  I+E+M + D++ DGRI Y+EF   MK
Sbjct: 122 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 73.4 bits (179), Expect = 3e-16
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)

Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           E L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNG
Sbjct: 1   EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60

Query: 375 T------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-D 427
           T         ++    +  S ++     K    +     +  I+A EL            
Sbjct: 61  TIDFPEFLSLMARKMKEQDSEEELIEAFK----VFDRDGNGLISAAELRHVMTNLGEKLT 116

Query: 428 DATIKEIMFEVDRDKDGRISYEEFCATMKT 457
           D  + E++ E D D DG I+YEEF   M +
Sbjct: 117 DDEVDEMIREADIDGDGHINYEEFVRMMVS 146

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 71.5 bits (174), Expect = 3e-15
 Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 6/146 (4%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT 376
           L  E I + K  F   D +  G ++  E    +  LG   T+ ++   ++  D DG+GT 
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73

Query: 377 LNLSLVQCKDTSLKDFNIFTKPSNILIRIMI-----SIYITADELEAAFKEYN-MGDDAT 430
                +      +K+         +     I       +I  +EL    +       +  
Sbjct: 74  DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133

Query: 431 IKEIMFEVDRDKDGRISYEEFCATMK 456
           I+++M + D++ DGRI ++EF   M+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.3 bits (171), Expect = 4e-15
 Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 18/152 (11%)

Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
            NL  E+I + KE F   D +++G+++  E    +  LG + +E +V   M   D+DGN 
Sbjct: 2   SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 61

Query: 375 T----------TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
                      +  L     +   L+ F +F K  +          I+A EL+       
Sbjct: 62  QIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGD--------GLISAAELKHVLTSIG 113

Query: 425 MGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
                   + M     D  G I+ ++F A + 
Sbjct: 114 EKLTDAEVDDMLREVSDGSGEINIQQFAALLS 145

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.2 bits (168), Expect = 8e-15
 Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 3/139 (2%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT--TL 377
           E+ Q+ +E F   D + +GT+   E K  +  LG    + ++K+ +   D +G G     
Sbjct: 3   EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62

Query: 378 NLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMF 436
           +   V  +  S KD       +  L     +  I+   L+   KE      D  ++E++ 
Sbjct: 63  DFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMID 122

Query: 437 EVDRDKDGRISYEEFCATM 455
           E DRD DG +S +EF   M
Sbjct: 123 EADRDGDGEVSEQEFLRIM 141

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (165), Expect = 2e-14
 Identities = 21/136 (15%), Positives = 35/136 (25%), Gaps = 6/136 (4%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCK 385
           KE F+  D    G + Y +    +  LG   T  +V + +     D   +          
Sbjct: 3   KEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLP 62

Query: 386 DTSLKDFNIFTKPSNILIRIMISI------YITADELEAAFKEYNMGDDATIKEIMFEVD 439
                  N         +             +   EL                E +    
Sbjct: 63  MLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGH 122

Query: 440 RDKDGRISYEEFCATM 455
            D +G I+YE F   +
Sbjct: 123 EDSNGCINYEAFLKHI 138

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 67.9 bits (165), Expect = 5e-14
 Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 19/171 (11%)

Query: 303 SKLKKLALKVIVE--NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
           SKL+   ++ ++E  +    EIQ+  + F       SG L+ +EFK              
Sbjct: 2   SKLRPEVMQDLLESTDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASK 59

Query: 361 -VKQYMQAADIDGNGT--------TLNLSLVQCKDTSLKD-FNIFTKPSNILI-----RI 405
             +   +  D +G+GT         L+++     +  LK  F+++    N  I       
Sbjct: 60  FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 119

Query: 406 MISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           ++              E     +   ++I  ++D ++DG++S EEF    K
Sbjct: 120 IVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 170

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

 Score = 65.9 bits (159), Expect = 1e-13
 Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)

Query: 329 FKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL----VQC 384
           FK++D N  G ++Y+E KA +SK  +   E  ++   ++ D DGNG              
Sbjct: 6   FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65

Query: 385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDG 444
           +   L D  I  K    L+ +     +T +E+ + FK++ +     + E + + D + DG
Sbjct: 66  QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK---VAEQVMKADANGDG 122

Query: 445 RISYEEFCATM 455
            I+ EEF    
Sbjct: 123 YITLEEFLEFS 133

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 65.8 bits (159), Expect = 3e-13
 Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 2/160 (1%)

Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           E L  EEI   KE FK +DT++SGT+T+DE K GL ++GS L E ++K  M AADID +G
Sbjct: 2   ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSG 61

Query: 375 TTLNLSLVQCKDTSLKDFNI-FTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKE 433
           T      +       K         +        S YIT DE++ A K++ + D   I +
Sbjct: 62  TIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDI-HIDD 120

Query: 434 IMFEVDRDKDGRISYEEFCATMKTGTHLRGTSYRNLSHIF 473
           ++ E+D+D DG+I Y EF A M+      G   R +    
Sbjct: 121 MIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTL 160

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

 Score = 65.8 bits (159), Expect = 4e-13
 Identities = 26/170 (15%), Positives = 46/170 (27%), Gaps = 23/170 (13%)

Query: 310 LKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSK-----LGSTLTEVDVKQY 364
           +K+  +      I++HK  F  +D N +G +T DE  +  S      L +T  +    Q 
Sbjct: 1   VKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQV 60

Query: 365 MQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN 424
              A   G G      +   +          ++           I    D +   F +  
Sbjct: 61  CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDG 120

Query: 425 MG------------------DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            G                       +      D D  G +  +E      
Sbjct: 121 SGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 170

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 65.6 bits (159), Expect = 5e-13
 Identities = 34/162 (20%), Positives = 58/162 (35%), Gaps = 20/162 (12%)

Query: 315 ENLPAEEIQKHKETFKQMDTND-SGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN 373
             + A +  + +E +K+      SGTL   EFK       +      V+   +A D +G+
Sbjct: 13  GAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGD 72

Query: 374 GT----------------TLNLSLVQCKDTSLKDFNIF---TKPSNILIRIMISIYITAD 414
            T                TL   L        KD N      +  +I+  I       + 
Sbjct: 73  NTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSV 132

Query: 415 ELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           E+EA  +   +  +  +  I   VD + DG++S  EF    +
Sbjct: 133 EVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR 174

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 1e-12
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 19/171 (11%)

Query: 303 SKLKKLALKVIVE--NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
           SKLK   ++ +        +E+Q+  + F +     SG L    F+    +         
Sbjct: 3   SKLKPEVVEELTRKTYFTEKEVQQWYKGFIKDC--PSGQLDAAGFQKIYKQFFPFGDPTK 60

Query: 361 -VKQYMQAADIDGNGTTLNLSLVQ-CKDTSLKDFNIFTKPSNILIRIMISIYITADELEA 418
                    D + +G       +Q    TS    +   + +  L  +    YIT +E+  
Sbjct: 61  FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLD 120

Query: 419 AFKEYNMGDDAT-------------IKEIMFEVDRDKDGRISYEEFCATMK 456
                      T             +  I   +D++ DG+++ +EF    K
Sbjct: 121 IVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK 171

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

 Score = 64.2 bits (155), Expect = 1e-12
 Identities = 26/169 (15%), Positives = 47/169 (27%), Gaps = 41/169 (24%)

Query: 319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSK-----LGSTLTEVDVKQYMQAADIDGN 373
              I +HK  F  +D N +G ++ DE     S      LG+T  +    +    A   G 
Sbjct: 8   PRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGA 67

Query: 374 GTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYI------TADELEAAFKEYNMGD 427
           G    +           D+  + +    L    +  Y            +A F   +   
Sbjct: 68  GMKYGVET---------DWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQ 118

Query: 428 D---------------------ATIKEIMFEVDRDKDGRISYEEFCATM 455
           +                        +E     D D+ G++  +E     
Sbjct: 119 NGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQH 167

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

 Score = 40.0 bits (92), Expect = 2e-04
 Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 3/126 (2%)

Query: 250 KDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMSKLKKLA 309
                 ++I +       A+  K     +  G      ++              KL    
Sbjct: 35  VYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVE---TDWPAYIEGWKKLATDE 91

Query: 310 LKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAAD 369
           L+   +N P          F  +D + +G +T DE+KA     G   +  D ++  +  D
Sbjct: 92  LEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCD 151

Query: 370 IDGNGT 375
           ID +G 
Sbjct: 152 IDESGQ 157

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 63.9 bits (154), Expect = 1e-12
 Identities = 21/162 (12%), Positives = 48/162 (29%), Gaps = 25/162 (15%)

Query: 319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTL---------------TEVDVKQ 363
           A    + K+ F + D + +G L   +F+     +                          
Sbjct: 3   AIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDY 62

Query: 364 YMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMI---------SIYITAD 414
             + A +  +G+      ++  +  + +    +    +   +              I AD
Sbjct: 63  LAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINAD 122

Query: 415 ELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           E  A      M       E   +VD + +G +S +E    ++
Sbjct: 123 EFAAWLTALGMSKA-EAAEAFNQVDTNGNGELSLDELLTAVR 163

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 64.0 bits (155), Expect = 2e-12
 Identities = 26/153 (16%), Positives = 53/153 (34%), Gaps = 21/153 (13%)

Query: 315 ENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEV--------DVKQYM 365
           + L  EEI  + K  F ++  +D   ++  E +  L+++ S   ++          +  +
Sbjct: 11  KVLSEEEIDDNFKTLFSKLAGDD-MEISVKELQTILNRIISKHKDLRTNGFSLESCRSMV 69

Query: 366 QAADIDGNGT---TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE 422
              D DGNG         L       L  F  F            S  ++A E+  A + 
Sbjct: 70  NLMDRDGNGKLGLVEFNILWNRIRNYLTIFRKFDLDK--------SGSMSAYEMRMAIEA 121

Query: 423 YNMGDDATIKEIMFEVDRDKDGRISYEEFCATM 455
                   + +++     D +  I ++ F   +
Sbjct: 122 AGFKLPCQLHQVIVARFADDELIIDFDNFVRCL 154

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 62.3 bits (150), Expect = 2e-12
 Identities = 22/143 (15%), Positives = 55/143 (38%), Gaps = 4/143 (2%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT 376
           LP ++IQ+ KE F  +D +  G ++ ++ KA   +LG    + ++   ++  +  G    
Sbjct: 1   LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK--EAPGPLNF 58

Query: 377 LNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIM 435
                +     S  D     + +  +     +  +  + ++   +      +   ++   
Sbjct: 59  TMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTF 118

Query: 436 FEVDRDKDGRISYEEFCATMKTG 458
            E   +  G+  Y +F A +K  
Sbjct: 119 KEAPVE-GGKFDYVKFTAMIKGS 140

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 63.1 bits (152), Expect = 3e-12
 Identities = 17/166 (10%), Positives = 45/166 (27%), Gaps = 27/166 (16%)

Query: 317 LPAEEIQKHKETFKQM-DTNDSGTLTYDEFKAGLSKLGSTLT---------------EVD 360
           L   + QK K TF    D N  G++  ++F+  +++                     E +
Sbjct: 2   LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61

Query: 361 VKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISI----------Y 410
            +     ADI+ +        +   + ++                +  +           
Sbjct: 62  WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121

Query: 411 ITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           +  +E +   K + +   A +  +   +            +     
Sbjct: 122 VDLEEFQNYCKNFQL-QCADVPAVYNVITDGGKVTFDLNRYKELYY 166

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 62.6 bits (151), Expect = 3e-12
 Identities = 26/150 (17%), Positives = 47/150 (31%), Gaps = 14/150 (9%)

Query: 320 EEIQKHKETFKQMDTN--DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTL 377
            EI+   E FK++ +   D G +  +EF+  L K     +     +     D   NG   
Sbjct: 14  SEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL-FADRVFDLFDTKHNGILG 72

Query: 378 NLSLVQCKDTSLKDFNIFTKPSNILIRI--MISIYITADELEAAF---------KEYNMG 426
                +       +  I  K              +I   E++               +  
Sbjct: 73  FEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTV 132

Query: 427 DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            +  I +   E D   DG+I  EE+ + + 
Sbjct: 133 IEDIIDKTFEEADTKHDGKIDKEEWRSLVL 162

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.8 bits (84), Expect = 0.003
 Identities = 14/133 (10%), Positives = 45/133 (33%), Gaps = 9/133 (6%)

Query: 225 GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNYENGEAW 284
           G +     +   FK++   ++ +   D +  +     N  +   +  +   + + N    
Sbjct: 34  GLINKEEFQLALFKTNKKESLFA---DRVFDLFDTKHNGILGFEEFARALSVFHPNAPID 90

Query: 285 DRP------IDTAIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTNDSG 338
           D+        D      +++      +     +  +            +TF++ DT   G
Sbjct: 91  DKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDG 150

Query: 339 TLTYDEFKAGLSK 351
            +  +E+++ + +
Sbjct: 151 KIDKEEWRSLVLR 163

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

 Score = 62.0 bits (149), Expect = 5e-12
 Identities = 22/154 (14%), Positives = 43/154 (27%), Gaps = 18/154 (11%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLT-----------EVDVKQYMQAA 368
             +QK K  F ++D +  G +T  +F++   +                  +         
Sbjct: 3   LWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLT 62

Query: 369 DIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIM------ISIYITADELEAAFKE 422
            + G       + +      +K+    +     L              I+ DE    F  
Sbjct: 63  AVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM 122

Query: 423 YNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
             +            +D + DG +S EEF     
Sbjct: 123 LGLDKT-MAPASFDAIDTNNDGLLSLEEFVIAGS 155

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.5 bits (151), Expect = 5e-12
 Identities = 35/172 (20%), Positives = 57/172 (33%), Gaps = 19/172 (11%)

Query: 303 SKLKKLALKVIVE--NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD 360
           SKL K  L  + +       EIQ+  + F +     SG L  ++F     +     +  D
Sbjct: 6   SKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDC--PSGQLAREDFVKIYKQFFPFGSPED 63

Query: 361 -VKQYMQAADIDGNGT-TLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEA 418
                    D D NG       +     TS          +  L  +    YIT DE+  
Sbjct: 64  FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLT 123

Query: 419 AFKEYNMG-------------DDATIKEIMFEVDRDKDGRISYEEFCATMKT 457
                                 +  +K+I   +D+++DG I+ +EF    K 
Sbjct: 124 IVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.3 bits (147), Expect = 6e-12
 Identities = 22/139 (15%), Positives = 44/139 (31%), Gaps = 9/139 (6%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLT--EVDVKQYMQAADIDGNGTTLNLSLVQ 383
           K+ F   D    G +  D     L  +G   T   V       ++  D +  TL+     
Sbjct: 5   KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 64

Query: 384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-------DDATIKEIMF 436
            +    +        +   ++        +    +      M         DA + E++ 
Sbjct: 65  IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK 124

Query: 437 EVDRDKDGRISYEEFCATM 455
            V+ D +G I Y++F   +
Sbjct: 125 GVEVDSNGEIDYKKFIEDV 143

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 61.2 bits (147), Expect = 7e-12
 Identities = 22/152 (14%), Positives = 41/152 (26%), Gaps = 9/152 (5%)

Query: 317 LPAEEIQKHKETFKQMDT--NDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
           L  +EI   K+ F+  D      G +   +       LG      D    +      G  
Sbjct: 1   LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNED-VFAVGGTHKMGEK 59

Query: 375 TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYI----TADELEAAFKEYNMGDDAT 430
           +      +   +  +              +            A+             D  
Sbjct: 60  SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 119

Query: 431 IKEIMFEVD--RDKDGRISYEEFCATMKTGTH 460
           + EI+   D   D +G + YE+F   +  G +
Sbjct: 120 VDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPY 151

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 58.4 bits (141), Expect = 1e-11
 Identities = 34/65 (52%), Positives = 45/65 (69%)

Query: 311 KVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADI 370
           K + E L  EEI   KE FK +DT++SGT+T+DE K GL ++GS L E ++K  M AADI
Sbjct: 11  KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70

Query: 371 DGNGT 375
           D +GT
Sbjct: 71  DKSGT 75

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 42.2 bits (99), Expect = 6e-06
 Identities = 26/125 (20%), Positives = 40/125 (32%), Gaps = 44/125 (35%)

Query: 335 NDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQA---ADIDGNGTTLNLSLVQCKDTSLKD 391
           + SG +  D+       +   L+E ++    +     D D +G                 
Sbjct: 1   HSSGHIDDDDKH-----MAERLSEEEIGGLKELFKMIDTDNSG----------------- 38

Query: 392 FNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEE 450
                              IT DEL+   K       ++ IK++M   D DK G I Y E
Sbjct: 39  ------------------TITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGE 80

Query: 451 FCATM 455
           F A  
Sbjct: 81  FIAAT 85

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.4 bits (143), Expect = 4e-11
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 17/152 (11%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYM-QAADIDGNGT-TL 377
            E+Q     FK    +  G +  + FK   ++            Y+  A D    G+   
Sbjct: 13  RELQVLYRGFKNECPS--GVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKF 70

Query: 378 NLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFK---------EYNMGDD 428
              +           +   + +  L  I    YI  +E+    K          Y +  +
Sbjct: 71  EDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKE 130

Query: 429 ATIKE----IMFEVDRDKDGRISYEEFCATMK 456
            T ++       ++D++KDG ++ +EF  + +
Sbjct: 131 DTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ 162

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

 Score = 59.4 bits (143), Expect = 5e-11
 Identities = 23/165 (13%), Positives = 57/165 (34%), Gaps = 15/165 (9%)

Query: 307 KLALKVIVENLPAEEIQKH-KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD----- 360
           ++   +       E+I    +  F Q+   D   ++  E +  L ++ +   ++      
Sbjct: 1   EIEANIEEIEANEEDIGDGFRRLFAQLAGED-AEISAFELQTILRRVLAKREDIKSDGFS 59

Query: 361 ---VKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELE 417
               K  +   D DG+G  L L       T ++ +    +  ++      S  + + E+ 
Sbjct: 60  IETCKIMVDMLDEDGSGK-LGLKEFYILWTKIQKYQKIYREIDVDR----SGTMNSYEMR 114

Query: 418 AAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLR 462
            A +E        + +++     D +  I ++ F   +     L 
Sbjct: 115 KALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLEILF 159

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 2e-10
 Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 12/151 (7%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG-----STLTEVDVKQYMQAADID 371
            P +        F  +     G +  DE +  L++ G             +  +   D D
Sbjct: 1   FPGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 59

Query: 372 GNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATI 431
            +GT     +   +   L       +   I      S  +   EL+ A            
Sbjct: 60  MSGT-----MGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQA 114

Query: 432 KEIMFEVDRDKDGRISYEEFCATMKTGTHLR 462
              + +     +G+I+++++ A       L 
Sbjct: 115 VNSIAK-RYSTNGKITFDDYIACCVKLRALT 144

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 59.3 bits (142), Expect = 3e-10
 Identities = 28/172 (16%), Positives = 56/172 (32%), Gaps = 25/172 (14%)

Query: 310 LKVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAAD 369
           L+     L  E+    ++ F     + SG  ++ + K  L+K   T+ E  +K+     +
Sbjct: 109 LRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVE 168

Query: 370 IDGNGTTLNLSLVQCKDT---------SLKDFNIFTKPSNILIRIMISIYITADELEAAF 420
            D  G    ++LV   +           +   +  T          + +      ++ A 
Sbjct: 169 NDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDAL 228

Query: 421 KEYNMGDDATIKEIMFEV----------------DRDKDGRISYEEFCATMK 456
             Y   D++        V                D DK G++S EE    ++
Sbjct: 229 FRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLE 280

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 49.6 bits (117), Expect = 3e-07
 Identities = 8/48 (16%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 410 YITADELEAAFKEYNMGD--DATIKEIMFEVDRDKDGRISYEEFCATM 455
            ++ +E++   ++ ++ +      +     VD D    +SY+EF   +
Sbjct: 269 QLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLV 316

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 8/53 (15%), Positives = 17/53 (32%), Gaps = 1/53 (1%)

Query: 323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLG-STLTEVDVKQYMQAADIDGNG 374
              +  +   D + SG L+ +E +  L             +      D+D + 
Sbjct: 253 LVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSK 305

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 55.4 bits (133), Expect = 3e-10
 Identities = 31/144 (21%), Positives = 49/144 (34%), Gaps = 46/144 (31%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT 376
           L A++I K    FK     D GT  Y  F   +   G T  +  VK+  +  D D +G  
Sbjct: 6   LKADDINKAISAFK-----DPGTFDYKRFFHLVGLKGKT--DAQVKEVFEILDKDQSG-- 56

Query: 377 LNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG----DDATIK 432
                                            +I  +EL+   K ++      +D   K
Sbjct: 57  ---------------------------------FIEEEELKGVLKGFSAHGRDLNDTETK 83

Query: 433 EIMFEVDRDKDGRISYEEFCATMK 456
            ++   D D DG+I  +EF   + 
Sbjct: 84  ALLAAGDSDHDGKIGADEFAKMVA 107

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 54.5 bits (131), Expect = 6e-10
 Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 42/141 (29%)

Query: 321 EIQKHKETFKQMD-TNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNL 379
           ++ K  +  K +D     G+  + +F A +      ++  DVK+  +A D D +G     
Sbjct: 4   DLLKADDIKKALDAVKAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASG----- 56

Query: 380 SLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG----DDATIKEIM 435
                                         +I  +EL+   K +        DA  K  +
Sbjct: 57  ------------------------------FIEEEELKFVLKSFAADGRDLTDAETKAFL 86

Query: 436 FEVDRDKDGRISYEEFCATMK 456
              D+D DG+I  +EF   + 
Sbjct: 87  KAADKDGDGKIGIDEFETLVH 107

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 41.0 bits (96), Expect = 3e-05
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL---GSTLTEVDVKQYMQAADIDG 372
            L A      K+ FK +D + SG +  +E K  L      G  LT+ + K +++AAD DG
Sbjct: 34  GLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDG 93

Query: 373 NGT 375
           +G 
Sbjct: 94  DGK 96

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (133), Expect = 6e-10
 Identities = 30/149 (20%), Positives = 61/149 (40%), Gaps = 12/149 (8%)

Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTE-----VDVKQYMQAADI 370
           +  A+EI++  + FK++D ++SG+L+ +EF +      + L +      D     +    
Sbjct: 9   HFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFK 68

Query: 371 DGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDAT 430
           +        S+   K+  L+                  ++    ++       N+ D   
Sbjct: 69  EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF----QVLKMMVGNNLKDTQL 124

Query: 431 ---IKEIMFEVDRDKDGRISYEEFCATMK 456
              + + +   D+D DGRIS+EEFCA + 
Sbjct: 125 QQIVDKTIINADKDGDGRISFEEFCAVVG 153

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.1 bits (127), Expect = 8e-10
 Identities = 19/61 (31%), Positives = 32/61 (52%)

Query: 315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG 374
            NL  E+I + KE F   D +++G+++  E    +  LG + +E +V   M   D+DGN 
Sbjct: 2   SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 61

Query: 375 T 375
            
Sbjct: 62  Q 62

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.1 bits (88), Expect = 1e-04
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM 455
            I++ EL    +   +   +A + ++M E+D D + +I + EF A M
Sbjct: 26  SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 1e-09
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 311 KVIVENLPAEEIQKHKETFKQMDTNDS-GTLTYDEFKAGLSKLGSTLTEVDVKQYMQAAD 369
           K  VE L  E+  + K  F         G+++  E    +  LG   T  ++++ +   D
Sbjct: 3   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 62

Query: 370 IDGNGT 375
            DG+GT
Sbjct: 63  EDGSGT 68

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 40.3 bits (94), Expect = 2e-05
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM 455
            I+  EL    +          ++E++ EVD D  G + ++EF   M
Sbjct: 32  SISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 78

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 2e-09
 Identities = 22/140 (15%), Positives = 45/140 (32%), Gaps = 14/140 (10%)

Query: 329 FKQMDTNDSGTLTYDEFKAGLSKLG-----STLTEVDVKQYMQAADIDGNGTTLNLSLVQ 383
           F  +     G +  +E +  L++ G     S  +    +  +   D D  G  +  +  +
Sbjct: 6   FSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGK-MGFNAFK 63

Query: 384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDK 442
               +L  +          +    S  +   EL  A           T+  I+      K
Sbjct: 64  ELWAALNAWKENFM----TVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYS--K 117

Query: 443 DGRISYEEFCATMKTGTHLR 462
           +GRI ++++ A       L 
Sbjct: 118 NGRIFFDDYVACCVKLRALT 137

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 18/131 (13%), Positives = 40/131 (30%), Gaps = 44/131 (33%)

Query: 323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV 382
              KE F  +D + SGT+ + E +  +  +G  L+   +   ++    +G          
Sbjct: 70  NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRI-------- 121

Query: 383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDK 442
                    F+ +       +   + +      L   F++                D  +
Sbjct: 122 --------FFDDY-------VACCVKL----RALTDFFRKR---------------DHLQ 147

Query: 443 DGRI--SYEEF 451
            G     Y++F
Sbjct: 148 QGSANFIYDDF 158

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.5 bits (130), Expect = 4e-09
 Identities = 28/175 (16%), Positives = 55/175 (31%), Gaps = 21/175 (12%)

Query: 301 AMSKLKKLALKVIVE--NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTE 358
               L K  L+ +        EE+    ++F +     SG +T  EF+   SK       
Sbjct: 4   KSGALSKEILEELQLNTKFTEEELSSWYQSFLKEC--PSGRITRQEFQTIYSKFFPEADP 61

Query: 359 VDVKQYM-QAADIDGNGT----------------TLNLSLVQCKDTSLKDFNIFTKPSNI 401
               Q++ ++ D + +GT                  N  L         D N     + +
Sbjct: 62  KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121

Query: 402 LIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           L  +     + + E      E     +   ++I     +  D +++ +EF     
Sbjct: 122 LEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTL 176

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 36.4 bits (83), Expect = 0.004
 Identities = 27/147 (18%), Positives = 50/147 (34%), Gaps = 16/147 (10%)

Query: 218 FWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN 277
           F  E   G +T    + I  K  P     + A+ + R     D N+  T+        L+
Sbjct: 34  FLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSF---DANSDGTLDFKEYVIALH 90

Query: 278 YENGEAWDRPIDTAI----------ISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKE 327
             +    ++ ++ A           IS+ +    ++ + K+      ++LP +E    K 
Sbjct: 91  MTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKR 150

Query: 328 T---FKQMDTNDSGTLTYDEFKAGLSK 351
               +      D   LT  EF  G   
Sbjct: 151 AEKIWGFFGKKDDDKLTEKEFIEGTLA 177

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 53.4 bits (127), Expect = 4e-09
 Identities = 21/151 (13%), Positives = 53/151 (35%), Gaps = 14/151 (9%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVD--------VKQYMQAADID 371
           EE+++ +  F Q+  +D   ++  E    L+K+ +   ++          +  +   D D
Sbjct: 1   EEVRQFRRLFAQLAGDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59

Query: 372 GNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATI 431
             G          +   L +     +       +  S  I + EL  AF+      +  +
Sbjct: 60  TTGKL-----GFEEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHL 114

Query: 432 KEIMFEVDRDKDGRISYEEFCATMKTGTHLR 462
             ++     D+ G + ++ F + +     + 
Sbjct: 115 YSMIIRRYSDEGGNMDFDNFISCLVRLDAMF 145

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 53.6 bits (128), Expect = 5e-09
 Identities = 18/104 (17%), Positives = 28/104 (26%), Gaps = 26/104 (25%)

Query: 113 YTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG 172
                   V   ++  +   +  GI+H DL   N + +       +   DF  +      
Sbjct: 100 VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----EEGIWIIDFPQS------ 149

Query: 173 KVYEEVVGTPLYMAPELLGPC----------KYGKEIDIWSAGL 206
                 V        E+L              Y  E DI SA  
Sbjct: 150 ------VEVGEEGWREILERDVRNIITYFSRTYRTEKDINSAID 187

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.2 bits (126), Expect = 7e-09
 Identities = 18/148 (12%), Positives = 46/148 (31%), Gaps = 5/148 (3%)

Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG-STLTEVDVKQYMQAADIDGNG 374
                +       F+++D + SG ++ +E +  LS    +    V V+  +   D +   
Sbjct: 12  GAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKA 71

Query: 375 TTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEI 434
                             N+F         ++    +        ++  +         +
Sbjct: 72  GVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQ----FHDIL 127

Query: 435 MFEVDRDKDGRISYEEFCATMKTGTHLR 462
           + + DR   G+I++++F         L 
Sbjct: 128 IRKFDRQGRGQIAFDDFIQGCIVLQRLT 155

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 52.0 bits (123), Expect = 9e-09
 Identities = 17/138 (12%), Positives = 42/138 (30%), Gaps = 2/138 (1%)

Query: 319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN-GTTL 377
           + +   +K+ F   D + +G +        L   G   T  ++ +       + +    L
Sbjct: 1   STDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFL 60

Query: 378 NLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFE 437
            +           D   F K   +  +    +    +             +  + E++  
Sbjct: 61  QVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKG 120

Query: 438 VDRDKDGRISYEEFCATM 455
           V    DG ++Y +F   +
Sbjct: 121 VPVK-DGMVNYHDFVQMI 137

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

 Score = 52.7 bits (125), Expect = 9e-09
 Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 4/143 (2%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNL 379
            + Q+  E F+ +DT+ SG ++  E  A LS  G   +    ++ +   D + +G     
Sbjct: 15  NDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFD 74

Query: 380 SLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVD 439
                    L     F K  +     + S  + A  L + ++        T + +M + D
Sbjct: 75  EFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQ----TFQALMRKFD 130

Query: 440 RDKDGRISYEEFCATMKTGTHLR 462
           R + G + ++++         +R
Sbjct: 131 RQRRGSLGFDDYVELSIFVCRVR 153

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 48.8 bits (116), Expect = 2e-08
 Identities = 21/59 (35%), Positives = 30/59 (50%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           L  E+I + KE F   D +  GT+T  E    +  LG   TE +++  +   D DGNGT
Sbjct: 2   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 38.0 bits (88), Expect = 1e-04
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 408 SIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM 455
              IT  EL    +       +A +++++ EVD D +G I + EF   M
Sbjct: 22  DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 48.8 bits (116), Expect = 3e-08
 Identities = 16/59 (27%), Positives = 27/59 (45%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           L  E I + K  F   D +  G ++  E    +  LG   T+ ++   ++  D DG+GT
Sbjct: 8   LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 66

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 41.5 bits (97), Expect = 9e-06
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM 455
            I+  EL    +          +  I+ EVD D  G I +EEF   M
Sbjct: 30  DISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 76

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 47.9 bits (114), Expect = 4e-08
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 410 YITADELEAAFKEYNMG---DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            ++ +EL+   +           T+ ++  E+D++ DG +S+EEF   +K
Sbjct: 25  QLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVK 74

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 41.0 bits (96), Expect = 1e-05
 Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 320 EEIQKHKETFKQMDTND--SGTLTYDEFKAGLSKLGSTL--TEVDVKQYMQAADIDGNGT 375
           +   + K  F++    +     L+ +E K  +     +L      +    Q  D +G+G 
Sbjct: 4   KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGE 63

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 47.5 bits (113), Expect = 5e-08
 Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 4/57 (7%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG-STLTEVDVKQYMQAADIDGNGT 375
           EEI      FK  D N  G + +DEFK  + K+G   LT+ +V++ M+ AD DGNG 
Sbjct: 2   EEI---LRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 55

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 46.8 bits (111), Expect = 9e-08
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 410 YITADELEAAFKE--YNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            I  DE +   ++       DA ++E M E D D +G I   EF   +K
Sbjct: 18  VIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 66

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.8 bits (116), Expect = 6e-08
 Identities = 27/149 (18%), Positives = 48/149 (32%), Gaps = 46/149 (30%)

Query: 313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG 372
           I + L AE+I    +     +  D  T    +F        S ++   VK   +  D D 
Sbjct: 2   ITDILSAEDIAAALQ-----ECQDPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQ 54

Query: 373 NGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG----DD 428
           +G                                   Y+  DEL+   +++        +
Sbjct: 55  SG-----------------------------------YLDGDELKYFLQKFQSDARELTE 79

Query: 429 ATIKEIMFEVDRDKDGRISYEEFCATMKT 457
           +  K +M   D D DG+I  +EF   + +
Sbjct: 80  SETKSLMDAADNDGDGKIGADEFQEMVHS 108

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

 Score = 47.9 bits (114), Expect = 6e-08
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 6/56 (10%)

Query: 408 SIYITADELEAAFKE------YNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKT 457
              +   EL+               D+A  +++M  +D ++D  + ++E+C  +  
Sbjct: 25  KFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 80

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 9/63 (14%), Positives = 20/63 (31%), Gaps = 7/63 (11%)

Query: 320 EEIQKHKETFKQMDTND--SGTLTYDEFKAGLSKLGSTL-----TEVDVKQYMQAADIDG 372
           + +     TF +    +     L   E K  L++   +       E   ++ M   D + 
Sbjct: 6   KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNR 65

Query: 373 NGT 375
           +  
Sbjct: 66  DNE 68

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 48.4 bits (115), Expect = 7e-08
 Identities = 28/144 (19%), Positives = 46/144 (31%), Gaps = 46/144 (31%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT 376
           L AE+I+K    F       + +  + +F   +       +  DVK+     D D +G  
Sbjct: 6   LSAEDIKKAIGAFT-----AADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSG-- 56

Query: 377 LNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG----DDATIK 432
                                            +I  DEL +  K ++           K
Sbjct: 57  ---------------------------------FIEEDELGSILKGFSSDARDLSAKETK 83

Query: 433 EIMFEVDRDKDGRISYEEFCATMK 456
            +M   D+D DG+I  EEF   + 
Sbjct: 84  TLMAAGDKDGDGKIGVEEFSTLVA 107

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%)

Query: 316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGST---LTEVDVKQYMQAADIDG 372
            L  +     K+ F  +D + SG +  DE  + L    S    L+  + K  M A D DG
Sbjct: 34  GLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDG 93

Query: 373 NGT 375
           +G 
Sbjct: 94  DGK 96

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 47.2 bits (112), Expect = 9e-08
 Identities = 13/56 (23%), Positives = 31/56 (55%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +  ++  + F+  D ++SGT+T  + +    +LG  LTE ++++ +  AD + +  
Sbjct: 6   DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNE 61

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 46.0 bits (109), Expect = 3e-07
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 410 YITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            IT  +L    KE      +  ++E++ E DR+ D  I  +EF   MK
Sbjct: 25  TITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMK 72

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 47.6 bits (113), Expect = 1e-07
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 15/111 (13%)

Query: 354 STLTEVDVKQYMQAADIDGNGTTLN----LSLVQCKDTSLKDFNIFTKPSNILIRIMISI 409
           + L + DV   + A        +       + V     SL D        +       S 
Sbjct: 3   AGLKDADVAAALAACSAAD---SFKHKEFFAKVGLASKSLDDVKKAFYVIDQ----DKSG 55

Query: 410 YITADELEAAFKEYNMG----DDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           +I  DEL+   + ++       DA  K  + + D+D DG I  +EF A +K
Sbjct: 56  FIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 39.5 bits (92), Expect = 8e-05
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGST---LTEVDVKQYMQAADIDGN 373
           L ++ +   K+ F  +D + SG +  DE K  L     +   LT+ + K ++   D DG+
Sbjct: 34  LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGD 93

Query: 374 GT 375
           G 
Sbjct: 94  GM 95

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 46.5 bits (110), Expect = 2e-07
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            I++ EL  A K         ++ +M E+D D DG IS++EF    +
Sbjct: 22  KISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFAR 68

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 46.5 bits (110), Expect = 2e-07
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           ++I   +  FK+ DTN  G ++  E    L  LGS +T  +V++ M   D DG+G 
Sbjct: 3   QDIADRERIFKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGF 57

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 46.1 bits (109), Expect = 2e-07
 Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMF-EVDRDKDGRISYEEFCATMK 456
            ++ DE       ++           F E+D D +G ++ +EF + ++
Sbjct: 17  KLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.8 bits (103), Expect = 1e-06
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           K  F++ D N  G L+ DEF+          T+ D+ ++ +  D+DGNG 
Sbjct: 4   KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGE 53

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

 Score = 46.4 bits (110), Expect = 2e-07
 Identities = 7/49 (14%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 410 YITADELEAAFKE---YNMGDDATIKEIMFEVDRDKDGRISYEEFCATM 455
            ++ +E +    +   + + D  ++ E M  +D ++D  + + E+   +
Sbjct: 32  SLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLI 80

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

 Score = 35.6 bits (82), Expect = 0.002
 Identities = 10/60 (16%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 320 EEIQKHKETFKQMDTND--SGTLTYDEFKAGLSKLG--STLTEVDVKQYMQAADIDGNGT 375
           E I+    TF      +    +L+ +EFK  +++           + + M++ D++ +  
Sbjct: 11  ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSE 70

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 44.9 bits (106), Expect = 5e-07
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 410 YITADELEAAFKEYNMGDD-ATIKEIMFEVDRDKDGRISYEEFCATMK 456
           +I  +EL    +          I+++M + D++ DGRI ++EF   M+
Sbjct: 25  FIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME 72

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 43.0 bits (101), Expect = 3e-06
 Identities = 12/50 (24%), Positives = 22/50 (44%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
              F+  D N  G +  +E    L   G  + E D++  M+ +D + +G 
Sbjct: 12  ANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGR 61

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

 Score = 45.6 bits (108), Expect = 5e-07
 Identities = 7/51 (13%), Positives = 20/51 (39%), Gaps = 6/51 (11%)

Query: 411 ITADELEAAFKEYNMG------DDATIKEIMFEVDRDKDGRISYEEFCATM 455
           +   EL+   ++           +    + M  +D +KD  + + E+  ++
Sbjct: 28  LCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSL 78

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.2 bits (104), Expect = 9e-07
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)

Query: 410 YITADELEAAFK---EYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            I+ +EL+   +      +   +T+ E++ EVD++ DG +S+EEF   MK
Sbjct: 23  QISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMK 72

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG--STLTEVDVKQYMQAADIDGNGT 375
           EEI+   E F      D   ++ +E K  +  LG         + + ++  D +G+G 
Sbjct: 5   EEIKGAFEVFA-AKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

 Score = 44.4 bits (105), Expect = 1e-06
 Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 411 ITADELEAAFKEY--NMGDDATIKEIMFEVDRDKDGRISYEEFCATM 455
           +  D+L+   +                 E+D + DG ++++EF   +
Sbjct: 29  VYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILV 75

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 1e-06
 Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 27/168 (16%)

Query: 291 AIISRVKQFRAMSKLKKLALKVIVENLPAEEIQKHKETFKQMDTND-SGTLTYDEFKAGL 349
            ++ + ++    S   ++  + I+     +     +   +   T+    +L++++F   L
Sbjct: 25  ELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLL 84

Query: 350 SKL-GSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMIS 408
           S    +   ++      +  D D +GT               +    ++  N L      
Sbjct: 85  SVFSDTATPDIKSHYAFRIFDFDDDGTL--------------NREDLSRLVNCLTGEGED 130

Query: 409 IYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
             ++A E++             I  I+ E D D+DG I+  EF   + 
Sbjct: 131 TRLSASEMKQL-----------IDNILEESDIDRDGTINLSEFQHVIS 167

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

 Score = 44.0 bits (104), Expect = 2e-06
 Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 6/52 (11%)

Query: 410 YITADELEAAFKE------YNMGDDATIKEIMFEVDRDKDGRISYEEFCATM 455
            ++  EL+    +       N+ D A I EI   +D ++D ++ ++EF + +
Sbjct: 26  TLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLV 77

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

 Score = 43.7 bits (103), Expect = 2e-06
 Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 411 ITADELEAAFKE----YNMGDDATIKEIMFEVDRDKDGRISYEEFCATM 455
           ++  EL+   ++     +   DA I  +M ++DR+KD  ++++E+   +
Sbjct: 28  LSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFL 76

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 43.4 bits (102), Expect = 2e-06
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 410 YITADELEAAFKEYNMGDDAT-IKEIMFEVDRDKDGRISYEEFCATMK 456
           YI  +EL+   +          I+E+M + D++ DGRI Y+EF   MK
Sbjct: 31  YIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 78

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 42.3 bits (99), Expect = 6e-06
 Identities = 15/50 (30%), Positives = 26/50 (52%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
            + F+  D N  G +  +E K  L   G T+TE D+++ M+  D + +G 
Sbjct: 18  SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 67

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 2e-06
 Identities = 11/52 (21%), Positives = 28/52 (53%), Gaps = 6/52 (11%)

Query: 410 YITADELEAAFKE------YNMGDDATIKEIMFEVDRDKDGRISYEEFCATM 455
           Y+T ++L    ++       N  D   + +IM ++D+ +DG++ ++ F + +
Sbjct: 24  YLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLI 75

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 7e-04
 Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 6/61 (9%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGST-----LTEVDVKQYMQAADIDGNG 374
             ++    TF +   +  G LT ++ +  + K            + V + M+  D   +G
Sbjct: 6   HAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDG 64

Query: 375 T 375
            
Sbjct: 65  K 65

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.7 bits (100), Expect = 3e-06
 Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           EEI   +E F+  D + +G ++  E +  ++ LG  LT+ +V + ++ ADIDG+G 
Sbjct: 3   EEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 55

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 40.0 bits (93), Expect = 3e-05
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM 455
           YI+A EL            D  + E++ E D D DG+++YEEF   M
Sbjct: 19  YISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.9 bits (98), Expect = 5e-06
 Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           E+     + F+  D   +G ++  + +  L+ LG  LT+ +V + ++  ++D NG 
Sbjct: 1   EDF---VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGE 53

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 34.6 bits (79), Expect = 0.001
 Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 410 YITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFC 452
            ++  +L            DA + E++  V+ D +G I Y++F 
Sbjct: 17  KVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

 Score = 42.2 bits (99), Expect = 7e-06
 Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 6/52 (11%)

Query: 410 YITADELEAAFKEYNMG------DDATIKEIMFEVDRDKDGRISYEEFCATM 455
            ++  EL+   +           D   + +IM E+D + DG + ++EF   +
Sbjct: 27  KLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLV 78

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 7/63 (11%)

Query: 320 EEIQKHKETFKQMDTND--SGTLTYDEFKAGLSKLGST-----LTEVDVKQYMQAADIDG 372
             ++     F      +     L+  E K  L    S+          V + M+  D +G
Sbjct: 6   TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENG 65

Query: 373 NGT 375
           +G 
Sbjct: 66  DGE 68

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 18/99 (18%)

Query: 358 EVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELE 417
             + K +    DI+ +G      L                   +  + +  +Y      E
Sbjct: 15  RFNPKTFFILHDINSDGVLDEQEL-----------------EALFTKELEKVY-DPKNEE 56

Query: 418 AAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
              +E         + +M  VD ++D  ++ EEF A+ +
Sbjct: 57  DDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 95

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.004
 Identities = 11/66 (16%), Positives = 18/66 (27%), Gaps = 16/66 (24%)

Query: 326 KETFKQMDTNDSGTLTYDEFKAGLSKLGSTLT----------------EVDVKQYMQAAD 369
           K  F   D N  G L   E +A  +K    +                     +  M+  D
Sbjct: 19  KTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVD 78

Query: 370 IDGNGT 375
            + +  
Sbjct: 79  TNQDRL 84

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (93), Expect = 5e-05
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +  E+  K+   F  +    +G L+ D+ K  L      L    + +  + +DID +G 
Sbjct: 4   VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGM 59

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 5e-04
 Identities = 9/47 (19%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
           +++ D+++       +  D  +  +    D D DG +  +EF   M 
Sbjct: 25  FLSGDKVKPVLLNSKLPVD-ILGRVWELSDIDHDGMLDRDEFAVAMF 70

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 6e-05
 Identities = 5/37 (13%), Positives = 10/37 (27%)

Query: 420 FKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
                      +  I    D    G++S ++F     
Sbjct: 35  IFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +   E  K+ E F + D +  G ++  E +     L + L    +       D    G 
Sbjct: 4   VSPAEKAKYDEIFLKTDKDMDGFVSGLEVRE--IFLKTGLPSTLLAHIWSLCDTKDCGK 60

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.3 bits (91), Expect = 8e-05
 Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 410 YITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
            + A +  A  K+  + D   + +I    D D  G +S +EF   ++
Sbjct: 27  RVLALDAAAFLKKSGLPDL-ILGKIWDLADTDGKGVLSKQEFFVALR 72

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 9e-05
 Identities = 9/54 (16%), Positives = 21/54 (38%), Gaps = 8/54 (14%)

Query: 410 YITADELEAAFKE--------YNMGDDATIKEIMFEVDRDKDGRISYEEFCATM 455
            I    L    KE         +      + ++  + D+++D +I + EF + +
Sbjct: 25  KIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLL 78

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 2e-04
 Identities = 10/57 (17%), Positives = 23/57 (40%)

Query: 319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
                   + F+  DT  + T++ +EF+A  ++    LT+    +      ++  G 
Sbjct: 16  TSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGR 72

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 425 MGDDATIKEIMFEVDRDKDGRISYEEFCATMK 456
                 +  I    D DKDG ++ +EFCA   
Sbjct: 39  KLPILELSHIWELSDFDKDGALTLDEFCAAFH 70

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.8 bits (82), Expect = 0.001
 Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT 375
           +  E+ Q +   FK +  +           A      S L  +++    + +D D +G 
Sbjct: 3   ITDEQRQYYVNQFKTIQPD--LNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGA 59

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 12/139 (8%), Positives = 29/139 (20%), Gaps = 15/139 (10%)

Query: 332 MDTNDSGTLTYDEFKAGLSKLGSTL--TEVDVKQYMQAADIDGNGT-----TLNLSLVQC 384
           M  N  G +    F          +              D             +  +  C
Sbjct: 16  MQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC 75

Query: 385 KDTSLKD-FNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDAT-------IKEIMF 436
               + + F  +   +   +           +   +     +   A        I +   
Sbjct: 76  PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEP 135

Query: 437 EVDRDKDGRISYEEFCATM 455
                + G++S E     +
Sbjct: 136 SGINAQRGQLSPEGMVWFL 154

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

 Score = 36.7 bits (85), Expect = 6e-04
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 424 NMGDDATIKEIMFEVDRDKDGRISYEEFC 452
           N  D   +  +M ++D D DG++ ++EF 
Sbjct: 47  NQKDPGVLDRMMKKLDLDSDGQLDFQEFL 75

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 9/26 (34%), Positives = 18/26 (69%)

Query: 427 DDATIKEIMFEVDRDKDGRISYEEFC 452
           ++  I+ IM ++D + D ++S+EEF 
Sbjct: 52  NEKVIEHIMEDLDTNADKQLSFEEFI 77

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

 Score = 35.5 bits (82), Expect = 0.001
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query: 424 NMGDDATIKEIMFEVDRDKDGRISYEEF 451
            + +   + ++M  +D D DG   ++EF
Sbjct: 47  EIKEQEVVDKVMETLDSDGDGECDFQEF 74

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 0.002
 Identities = 5/29 (17%), Positives = 16/29 (55%)

Query: 424 NMGDDATIKEIMFEVDRDKDGRISYEEFC 452
           +  D   + +++ ++D + D ++ + EF 
Sbjct: 47  SGKDKDAVDKLLKDLDANGDAQVDFSEFI 75

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	483
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.84
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.84
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.84
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.83
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.83
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.82
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	99.82
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.8
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.79
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	99.78
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.78
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.76
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	99.76
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.74
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	99.72
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	99.69
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	99.65
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	99.64
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.63
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	99.62
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	99.62
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	99.61
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	99.59
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	99.59
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	99.59
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	99.58
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	99.58
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	99.58
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	99.57
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	99.56
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	99.56
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	99.55
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	99.54
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	99.52
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	99.48
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.46
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.46
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.45
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.44
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	99.43
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.42
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.42
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.39
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.38
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.36
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.36
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.36
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.36
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	99.35
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.34
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	99.32
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.32
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.32
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	99.23
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.19
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	99.13
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	99.07
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.05
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.03
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.02
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.01
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	99.01
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	99.0
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	99.0
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	98.99
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	98.99
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.97
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.96
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	98.95
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	98.95
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	98.95
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	98.95
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	98.92
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	98.91
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	98.89
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	98.88
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	98.88
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	98.86
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.85
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	98.83
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	98.83
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.83
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.82
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	98.81
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.8
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.78
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	98.77
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.76
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	98.75
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.73
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	98.72
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	98.72
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	98.65
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	98.64
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	98.64
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	98.64
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	98.63
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.63
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	98.57
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	98.55
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	98.49
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	98.48
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	98.46
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	98.45
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	98.44
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	98.44
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.43
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.43
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	98.42
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	98.42
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	98.42
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	98.41
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	98.4
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	98.4
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	98.39
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	98.36
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	98.35
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	98.34
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	98.34
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	98.33
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	98.32
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	98.28
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	98.27
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	98.25
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	98.24
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	98.21
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	98.21
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.2
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	98.2
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.19
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	98.19
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.14
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.14
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	98.1
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	98.08
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	98.07
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	98.07
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	98.06
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	98.04
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	98.01
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	97.94
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	97.94
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	97.92
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	97.91
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	97.91
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.9
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	97.87
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	97.87
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	97.87
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.83
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	97.77
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	97.68
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	97.6
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.21
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.12
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	97.1
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	96.99
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	96.45
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	96.38
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	96.22
d1h8ba_	73	alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}	96.16
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	96.12
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	95.7
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	95.47
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	95.18
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	95.15
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	93.31
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	93.22
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	92.87
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	92.82
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	90.71
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	84.2

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.7e-55  Score=426.19  Aligned_cols=259  Identities=36%  Similarity=0.608  Sum_probs=209.6

Q ss_pred             cccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC-------------------------------
Q 048594           43 AYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG-------------------------------   91 (483)
Q Consensus        43 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-------------------------------   91 (483)
                      ..++|.++|++.+.||+|+||+||+|.++.+|+.||||++.+.......                               
T Consensus         3 ~~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~   82 (307)
T d1a06a_           3 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHL   82 (307)
T ss_dssp             ECSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             CCCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            3568899999999999999999999999999999999999765422111                               


Q ss_pred             eEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           92 YLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |+|||||+||+|.+++...+++++..+..++.||+.||.|||++||+||||||+|||+...+.++.+||+|||++.....
T Consensus        83 ~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~  162 (307)
T d1a06a_          83 YLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP  162 (307)
T ss_dssp             EEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC--------
T ss_pred             EEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccC
Confidence            99999999999999999999999999999999999999999999999999999999997656678999999999988776


Q ss_pred             CceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          172 GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      .......+||+.|+|||++.+..|+.++||||+||++|+|++|.+||.+.........+......++.+.++.+|+++++
T Consensus       163 ~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  242 (307)
T d1a06a_         163 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD  242 (307)
T ss_dssp             ----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHH
T ss_pred             CCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHH
Confidence            66666778999999999999989999999999999999999999999999999999999999888887778899999999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCCCCCCCCCCCCCCHHHHHHHHHHhhhh
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLNYENGEAWDRPIDTAIISRVKQFRAMS  303 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (483)
                      ||.+||++||.+|||++|+|+||||+..  ............+.+++....+
T Consensus       243 li~~~L~~dP~~R~s~~eil~hp~~~~~--~~~~~~~~~~~~~~~~~~~~~~  292 (307)
T d1a06a_         243 FIRHLMEKDPEKRFTCEQALQHPWIAGD--TALDKNIHQSVSEQIKKNFAKS  292 (307)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHSTTTTSS--CCCCCCCHHHHHHHHHHHSCCC
T ss_pred             HHHHHccCCHhHCcCHHHHhcCHhhCCC--CccccccchhHHHHHHHHHHHh
Confidence            9999999999999999999999999732  2223333344444455443333

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-53  Score=400.99  Aligned_cols=221  Identities=30%  Similarity=0.566  Sum_probs=199.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~   95 (483)
                      ++|++.+.||+|+||+||+|+++.+|+.||+|++.+....                                 ...|+||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4799999999999999999999999999999998653210                                 1119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      |||+||+|.+++...+++++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|....... .
T Consensus        86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill---~~~~~~kl~DFG~a~~~~~~~-~  161 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSSR-R  161 (263)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCSCSCCCCCC-C
T ss_pred             eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccccee---cCCCCEeecccceeeecCCCc-c
Confidence            999999999999988899999999999999999999999999999999999999   677899999999998765433 3


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ...+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+....+..+.+..+.++    +.+|+++++||.+
T Consensus       162 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~  237 (263)
T d2j4za1         162 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISR  237 (263)
T ss_dssp             EETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHHHHH
T ss_pred             cccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHHHH
Confidence            456899999999999998899999999999999999999999999999999999888776554    3689999999999


Q ss_pred             hCccCCCCCCCHHHHHcCCcCC
Q 048594          256 MLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||++||.+|||++|+|+||||+
T Consensus       238 ~L~~dp~~R~t~~eil~hp~~~  259 (263)
T d2j4za1         238 LLKHNPSQRPMLREVLEHPWIT  259 (263)
T ss_dssp             HTCSSGGGSCCHHHHHTCHHHH
T ss_pred             HccCCHhHCcCHHHHHcCcCcC
Confidence            9999999999999999999997

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-53  Score=401.77  Aligned_cols=227  Identities=31%  Similarity=0.542  Sum_probs=192.5

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC-------------------------------eEEE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG-------------------------------YLKR   95 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-------------------------------~lv~   95 (483)
                      |.++|++++.||+|+||+||+|+++.+|+.||||++......+..                               |+||
T Consensus         3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivm   82 (271)
T d1nvra_           3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   82 (271)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEE
Confidence            567899999999999999999999999999999999765422111                               8999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--  173 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--  173 (483)
                      |||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|..+....  
T Consensus        83 Ey~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl---~~~~~~KL~DFG~a~~~~~~~~~  159 (271)
T d1nvra_          83 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE  159 (271)
T ss_dssp             ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECEETTEE
T ss_pred             eccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEE---CCCCCEEEccchhheeeccCCcc
Confidence            999999999999988899999999999999999999999999999999999999   567789999999998765432  


Q ss_pred             -eecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          174 -VYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       174 -~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                       .....+||+.|+|||++.+..+ +.++||||+||++|+|++|++||.................. ...+++.+|+++++
T Consensus       160 ~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~  238 (271)
T d1nvra_         160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-YLNPWKKIDSAPLA  238 (271)
T ss_dssp             CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCT-TSTTGGGSCHHHHH
T ss_pred             ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-CCCccccCCHHHHH
Confidence             2345689999999999987776 57899999999999999999999876554333333222222 23345678999999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||.+||+.||.+|||++|+|+||||+
T Consensus       239 li~~~L~~dP~~R~t~~eil~hpwf~  264 (271)
T d1nvra_         239 LLHKILVENPSARITIPDIKKDRWYN  264 (271)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTTCTTTT
T ss_pred             HHHHHcCCChhHCcCHHHHhcCHhhC
Confidence            99999999999999999999999997

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-52  Score=404.76  Aligned_cols=234  Identities=35%  Similarity=0.621  Sum_probs=211.8

Q ss_pred             ccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc---------------------------------
Q 048594           44 YEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE---------------------------------   90 (483)
Q Consensus        44 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~---------------------------------   90 (483)
                      .+++.++|++.+.||+|+||+||+|.++.+|+.||||++.+......                                 
T Consensus         5 ~~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~   84 (293)
T d1jksa_           5 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN   84 (293)
T ss_dssp             CSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence            35788999999999999999999999999999999999976542211                                 


Q ss_pred             ---CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC-CCCcEEEeecccc
Q 048594           91 ---GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD-ENATLKATDFGLA  166 (483)
Q Consensus        91 ---~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~-~~~~ikl~Dfg~a  166 (483)
                         .|+|||||+||+|.+++.+.+++++..++.++.||+.||+|||+++|+||||||+|||+..++ ....+||+|||++
T Consensus        85 ~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          85 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhh
Confidence               099999999999999999888999999999999999999999999999999999999996433 2346999999999


Q ss_pred             eeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          167 FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      .....+.......||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+.+..+......++...++.+|
T Consensus       165 ~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  244 (293)
T d1jksa_         165 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS  244 (293)
T ss_dssp             EECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred             hhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCC
Confidence            98876666667789999999999998889999999999999999999999999999999999999888777666667899


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +++++||.+||++||.+|||++|+|+||||+
T Consensus       245 ~~~~~li~~~L~~dP~~R~s~~eil~hp~~~  275 (293)
T d1jksa_         245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK  275 (293)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTC
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence            9999999999999999999999999999997

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=4.7e-52  Score=411.18  Aligned_cols=233  Identities=36%  Similarity=0.574  Sum_probs=210.6

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------cCeEEE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------EGYLKR   95 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------~~~lv~   95 (483)
                      ++-++|++++.||+|+||+||+|+++.+|+.||||++......+                              ..|+||
T Consensus        23 ~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm  102 (350)
T d1koaa2          23 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY  102 (350)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            55678999999999999999999999999999999997654211                              119999


Q ss_pred             eccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           96 EHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      |||+||+|.+++.. .+++++..++.++.||+.||.|||++||+||||||+|||+..+ .++.+||+|||++..+.....
T Consensus       103 E~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~-~~~~vkL~DFG~a~~~~~~~~  181 (350)
T d1koaa2         103 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQS  181 (350)
T ss_dssp             CCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TSCCEEECCCTTCEECCTTSC
T ss_pred             EcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccC-CCCeEEEeecchheecccccc
Confidence            99999999999954 4679999999999999999999999999999999999999542 357899999999998877766


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+......++...++.+|+++++||.
T Consensus       182 ~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  261 (350)
T d1koaa2         182 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR  261 (350)
T ss_dssp             EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHH
T ss_pred             cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHH
Confidence            67789999999999999988999999999999999999999999999999999999988887777777789999999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcCCCC
Q 048594          255 RMLIRDPNNQITVAQILKHPWLNYE  279 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~~~~  279 (483)
                      +||++||.+|||++|+|+||||+..
T Consensus       262 ~~L~~dP~~R~t~~eil~hp~~~~~  286 (350)
T d1koaa2         262 KLLLADPNTRMTIHQALEHPWLTPG  286 (350)
T ss_dssp             HHCCSSGGGSCCHHHHHHSTTTSCT
T ss_pred             HHccCChhHCcCHHHHhcCcccCCC
Confidence            9999999999999999999999843

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=9.2e-52  Score=409.37  Aligned_cols=232  Identities=32%  Similarity=0.529  Sum_probs=210.7

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC------------------------------CcCeEEE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS------------------------------DEGYLKR   95 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~lv~   95 (483)
                      .+.++|++++.||+|+||+||+|+++.+|+.||||++.+....                              ...|+||
T Consensus        26 ~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm  105 (352)
T d1koba_          26 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL  105 (352)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            4567899999999999999999999999999999999765311                              1119999


Q ss_pred             eccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           96 EHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      |||+||+|.+++... .++++..++.++.||+.||.|||++||+||||||+|||+.. ...+.+||+|||+|..+.....
T Consensus       106 E~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~-~~~~~vkL~DFGla~~~~~~~~  184 (352)
T d1koba_         106 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLNPDEI  184 (352)
T ss_dssp             ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEECCTTSC
T ss_pred             EcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc-cCCCeEEEeecccceecCCCCc
Confidence            999999999988665 46999999999999999999999999999999999999943 1457899999999999877766


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      .....||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+....+..+......++...++.+|+++++||.
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  264 (352)
T d1koba_         185 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIK  264 (352)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHH
T ss_pred             eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHH
Confidence            67788999999999999989999999999999999999999999999999999999998888888788899999999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcCCC
Q 048594          255 RMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      +||++||.+|||++|+|+||||+.
T Consensus       265 ~~L~~dp~~R~s~~eil~Hp~~~~  288 (352)
T d1koba_         265 NLLQKEPRKRLTVHDALEHPWLKG  288 (352)
T ss_dssp             TTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred             HHccCChhHCcCHHHHhcCHhhCC
Confidence            999999999999999999999984

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-52  Score=398.90  Aligned_cols=227  Identities=28%  Similarity=0.494  Sum_probs=198.2

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc------------------------------CeEEE
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE------------------------------GYLKR   95 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~------------------------------~~lv~   95 (483)
                      +..++|++++.||+|+||+||+|.++.+|+.||||++........                              .|+||
T Consensus        17 dp~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   96 (293)
T d1yhwa1          17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (293)
T ss_dssp             CTTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEE
Confidence            445689999999999999999999999999999999976542221                              19999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-e
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-V  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~  174 (483)
                      |||+||+|.+++.+. ++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|..+.... .
T Consensus        97 Ey~~gg~L~~~~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl---~~~~~vkl~DFG~a~~~~~~~~~  172 (293)
T d1yhwa1          97 EYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK  172 (293)
T ss_dssp             ECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSTTCC
T ss_pred             EecCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEE---CCCCcEeeccchhheeecccccc
Confidence            999999999988764 79999999999999999999999999999999999999   567899999999998875433 3


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....+||+.|+|||++.+..++.++||||+||++|+|++|.+||.+.+....+..+...... ....++.+|+++++||.
T Consensus       173 ~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~li~  251 (293)
T d1yhwa1         173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIFRDFLN  251 (293)
T ss_dssp             BCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC-CCSSGGGSCHHHHHHHH
T ss_pred             ccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCC-CCCCcccCCHHHHHHHH
Confidence            45668999999999999988999999999999999999999999998887777766654332 12233578999999999


Q ss_pred             HhCccCCCCCCCHHHHHcCCcCC
Q 048594          255 RMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +||++||.+|||++|+|+||||+
T Consensus       252 ~~L~~dP~~R~s~~eil~Hp~~~  274 (293)
T d1yhwa1         252 RCLDMDVEKRGSAKELLQHQFLK  274 (293)
T ss_dssp             HHTCSSTTTSCCHHHHTTCGGGG
T ss_pred             HHccCChhHCcCHHHHhcCHhhC
Confidence            99999999999999999999997

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=3.1e-51  Score=392.53  Aligned_cols=228  Identities=34%  Similarity=0.635  Sum_probs=208.3

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------------
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------------   89 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------------   89 (483)
                      |.++|++.+.||+|+||+||+|+++.+|+.||||++.+.....                                     
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~   80 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   80 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence            4679999999999999999999999999999999997653211                                     


Q ss_pred             ---cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           90 ---EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        90 ---~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                         ..|+|||||+||+|.++|..++++++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||++
T Consensus        81 ~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a  157 (277)
T d1phka_          81 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFS  157 (277)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTC
T ss_pred             cCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE---cCCCCeEEccchhe
Confidence               019999999999999999988999999999999999999999999999999999999999   67889999999999


Q ss_pred             eeccCCceecccccCCcccCccccC------CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC
Q 048594          167 FFFEEGKVYEEVVGTPLYMAPELLG------PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD  240 (483)
Q Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  240 (483)
                      ..+..........||+.|+|||.+.      ...++.++||||+||++|+|++|++||.+.+.......+..+...++.+
T Consensus       158 ~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~  237 (277)
T d1phka_         158 CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP  237 (277)
T ss_dssp             EECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT
T ss_pred             eEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCc
Confidence            9887766666778999999999884      3356889999999999999999999999999999999999988887777


Q ss_pred             CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          241 PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       241 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      .++.+|+++++||.+||++||++|||++|+|+||||+
T Consensus       238 ~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~  274 (277)
T d1phka_         238 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ  274 (277)
T ss_dssp             TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHH
Confidence            7789999999999999999999999999999999997

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-51  Score=400.62  Aligned_cols=223  Identities=30%  Similarity=0.524  Sum_probs=201.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+...                                 .+..|+||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            579999999999999999999999999999999975421                                 01119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-Cce
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GKV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~~~  174 (483)
                      |||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|+.... ...
T Consensus        85 ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl---~~~g~vkl~DFG~a~~~~~~~~~  161 (337)
T d1o6la_          85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTCC
T ss_pred             eccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe---cCCCCEEEeecccccccccCCcc
Confidence            999999999999999999999999999999999999999999999999999999   6778999999999987543 344


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....+||+.|+|||++.+..|+.++|||||||++|+|++|++||.+.+.......+....+.++    ..+|+++++||.
T Consensus       162 ~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli~  237 (337)
T d1o6la_         162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLLA  237 (337)
T ss_dssp             BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHH
T ss_pred             cccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHHHH
Confidence            4567899999999999999999999999999999999999999999999999999888876654    468999999999


Q ss_pred             HhCccCCCCCCC-----HHHHHcCCcCCC
Q 048594          255 RMLIRDPNNQIT-----VAQILKHPWLNY  278 (483)
Q Consensus       255 ~~L~~dP~~R~t-----~~e~L~h~~~~~  278 (483)
                      +||++||.+|++     ++|+++||||+.
T Consensus       238 ~~L~~dP~~R~~~~~~~~~eil~Hp~f~~  266 (337)
T d1o6la_         238 GLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             HHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             hhccCCchhhcccccccHHHHHcCccccc
Confidence            999999999994     999999999973

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-51  Score=396.63  Aligned_cols=225  Identities=29%  Similarity=0.492  Sum_probs=198.2

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv   94 (483)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+...                                 .+..|+|
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv   86 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG   86 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEE
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEE
Confidence            3679999999999999999999999999999999875321                                 1111999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-  173 (483)
                      ||||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|..+.... 
T Consensus        87 mEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll---~~~~~vkl~DFG~a~~~~~~~~  163 (288)
T d1uu3a_          87 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK  163 (288)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECC----
T ss_pred             EEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc---CCCceEEecccccceecccCCc
Confidence            9999999999999988999999999999999999999999999999999999999   677899999999998765322 


Q ss_pred             --eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          174 --VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       174 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                        .....+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+.......+.+..+.++    ..+++++++
T Consensus       164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~  239 (288)
T d1uu3a_         164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD  239 (288)
T ss_dssp             ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCC----TTCCHHHHH
T ss_pred             ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCC----ccCCHHHHH
Confidence              23456899999999999998999999999999999999999999999999999999988776654    368999999


Q ss_pred             HHHHhCccCCCCCCCHHH------HHcCCcCCCC
Q 048594          252 LIRRMLIRDPNNQITVAQ------ILKHPWLNYE  279 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e------~L~h~~~~~~  279 (483)
                      ||.+||++||.+|||++|      +++||||+.-
T Consensus       240 li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i  273 (288)
T d1uu3a_         240 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  273 (288)
T ss_dssp             HHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             HHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence            999999999999999987      5889999843

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-51  Score=393.65  Aligned_cols=226  Identities=27%  Similarity=0.440  Sum_probs=196.4

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC------------------------------eEEEec
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG------------------------------YLKREH   97 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~------------------------------~lv~E~   97 (483)
                      .+.|++++.||+|+||+||+|+++.+|+.||||++.........                              |+||||
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            45799999999999999999999999999999999765422111                              999999


Q ss_pred             cCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-cee
Q 048594           98 CDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVY  175 (483)
Q Consensus        98 ~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~  175 (483)
                      |+||+|.+++.+ .+++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|...... ...
T Consensus        91 ~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll---~~~~~~Kl~DFG~a~~~~~~~~~~  167 (288)
T d2jfla1          91 CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRTIQRR  167 (288)
T ss_dssp             CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECHHHHHHH
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeE---CCCCCEEEEechhhhccCCCcccc
Confidence            999999998765 4679999999999999999999999999999999999999   67789999999999765432 223


Q ss_pred             cccccCCcccCccccC-----CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          176 EEVVGTPLYMAPELLG-----PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                      ...+||+.|+|||++.     +..|+.++||||+||++|+|++|.+||.+.+..+.+..+........ ..++.+|++++
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~  246 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL-AQPSRWSSNFK  246 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCC-SSGGGSCHHHH
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-CccccCCHHHH
Confidence            4568999999999983     45678999999999999999999999999988888888887654322 22357899999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +||.+||++||.+|||++|+|+||||+
T Consensus       247 ~li~~~L~~dp~~R~t~~ell~hp~~~  273 (288)
T d2jfla1         247 DFLKKCLEKNVDARWTTSQLLQHPFVT  273 (288)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTTSGGGC
T ss_pred             HHHHHHccCChhHCcCHHHHhcCcccC
Confidence            999999999999999999999999997

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-51  Score=389.59  Aligned_cols=222  Identities=30%  Similarity=0.468  Sum_probs=186.6

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC----------------------------------cCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD----------------------------------EGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~lv   94 (483)
                      ++|++++.||+|+||+||+|+++.+|+.||||++......+                                  ..|+|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            57999999999999999999999999999999997654211                                  11899


Q ss_pred             EeccCCCChHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           95 REHCDGGTLVDRISD----RERYTERAAASVFRSVVNALHACHSNG-----IMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~----~~~l~~~~~~~i~~qil~~l~~LH~~~-----ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                      ||||+||+|.+++..    ...+++..++.++.||+.||+|||+++     |+||||||+|||+   +.++.+||+|||+
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll---~~~~~vkl~DFG~  160 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGL  160 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEE---CTTSCEEECCHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCc---CCCCcEEEeeccc
Confidence            999999999999863    467999999999999999999999976     9999999999999   6778999999999


Q ss_pred             ceeccCCc-eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCC
Q 048594          166 AFFFEEGK-VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       166 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  244 (483)
                      +..+.... .....+||+.|+|||++.+..|+.++|||||||++|+|++|++||.+.+..+....+..+.....   ...
T Consensus       161 a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~---~~~  237 (269)
T d2java1         161 ARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI---PYR  237 (269)
T ss_dssp             HHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC---CTT
T ss_pred             eeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC---Ccc
Confidence            98765433 23457899999999999988999999999999999999999999999988888888887655322   246


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCHHHHHcCCcC
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITVAQILKHPWL  276 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~  276 (483)
                      +|+++.+||.+||++||.+|||++|+|+|||+
T Consensus       238 ~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         238 YSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             cCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            89999999999999999999999999999996

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-51  Score=401.32  Aligned_cols=231  Identities=32%  Similarity=0.542  Sum_probs=210.9

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------cCeEEEe
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------EGYLKRE   96 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~lv~E   96 (483)
                      +|.++|.+++.||+|+||+||+|.++.+|+.||||++.+.....                             ..|+|||
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE   81 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            57789999999999999999999999999999999997654211                             1199999


Q ss_pred             ccCCCChHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           97 HCDGGTLVDRISDRE-RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~-~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      ||+|++|.+++...+ ++++..++.++.||+.||+|||++||+||||||+|||+..+ ....+||+|||++.........
T Consensus        82 ~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~-~~~~ikl~DFG~~~~~~~~~~~  160 (321)
T d1tkia_          82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCEECCTTCEE
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCC-CceEEEEcccchhhccccCCcc
Confidence            999999999998764 79999999999999999999999999999999999999542 4568999999999988776666


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ....+|+.|+|||.+.+..++.++||||+||++|+|++|.+||.+.+....+..|.+....++...++.+|+++++||.+
T Consensus       161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  240 (321)
T d1tkia_         161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR  240 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHT
T ss_pred             cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHH
Confidence            77889999999999999889999999999999999999999999999999999999988887777777899999999999


Q ss_pred             hCccCCCCCCCHHHHHcCCcCC
Q 048594          256 MLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||++||.+|||++|+|+||||+
T Consensus       241 ~L~~dp~~R~s~~eil~hp~~~  262 (321)
T d1tkia_         241 LLVKERKSRMTASEALQHPWLK  262 (321)
T ss_dssp             TSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HccCChhHCcCHHHHhcCHhhc
Confidence            9999999999999999999997

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-51  Score=404.04  Aligned_cols=233  Identities=35%  Similarity=0.599  Sum_probs=198.9

Q ss_pred             cccccceEEee-eecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------CCcCeE
Q 048594           45 EDIKLHFTIAE-ELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------SDEGYL   93 (483)
Q Consensus        45 ~~i~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------~~~~~l   93 (483)
                      ..+-++|.++. .||+|+||+||+|+++.+|+.||||++.....                              ....|+
T Consensus         7 ~~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~i   86 (335)
T d2ozaa1           7 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI   86 (335)
T ss_dssp             SCGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             CCcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEE
Confidence            45567899875 69999999999999999999999999865420                              011299


Q ss_pred             EEeccCCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           94 KREHCDGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      |||||+||+|.++|.+.  .++++.+++.++.||+.||+|||++||+||||||+|||+...+..+.+||+|||+|.....
T Consensus        87 vmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~  166 (335)
T d2ozaa1          87 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS  166 (335)
T ss_dssp             EEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCC
T ss_pred             EEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccC
Confidence            99999999999999875  4699999999999999999999999999999999999997665678899999999998876


Q ss_pred             CceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHH----HHccccCCCCCCCCCCCH
Q 048594          172 GKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTA----IMSREIDFKSDPWPTISS  247 (483)
Q Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~  247 (483)
                      .......+||+.|+|||++.+..|+.++|||||||++|+|++|++||.+.+.......    +......++.+.++.+|+
T Consensus       167 ~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  246 (335)
T d2ozaa1         167 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE  246 (335)
T ss_dssp             CCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCH
T ss_pred             CCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCH
Confidence            6666778999999999999998899999999999999999999999987665444433    333444555555567899


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ++++||.+||++||++|||+.|+|+||||.
T Consensus       247 ~~~~li~~~L~~dP~~R~s~~eil~hp~~~  276 (335)
T d2ozaa1         247 EVKMLIRNLLKTEPTQRMTITEFMNHPWIM  276 (335)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHcCHHhh
Confidence            999999999999999999999999999997

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.4e-50  Score=390.66  Aligned_cols=221  Identities=32%  Similarity=0.584  Sum_probs=200.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC---------------------------------CCcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK---------------------------------SDEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------------------------------~~~~~lv~   95 (483)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+...                                 ....|+||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            469999999999999999999999999999999965321                                 11119999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      |||.||+|..++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|......  .
T Consensus        84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl---~~~g~vkL~DFG~a~~~~~~--~  158 (316)
T d1fota_          84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDV--T  158 (316)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSSC--B
T ss_pred             eecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE---cCCCCEEEecCccceEeccc--c
Confidence            999999999999999999999999999999999999999999999999999999   67789999999999887543  3


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ...+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+..+....+..+...++    +.+|++++++|.+
T Consensus       159 ~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~  234 (316)
T d1fota_         159 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSR  234 (316)
T ss_dssp             CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHH
T ss_pred             ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHH
Confidence            457899999999999998899999999999999999999999999999999999988766544    4689999999999


Q ss_pred             hCccCCCCCC-----CHHHHHcCCcCCC
Q 048594          256 MLIRDPNNQI-----TVAQILKHPWLNY  278 (483)
Q Consensus       256 ~L~~dP~~R~-----t~~e~L~h~~~~~  278 (483)
                      ||.+||.+|+     |++++|+||||+.
T Consensus       235 ~L~~dp~~R~~~~r~t~~~il~Hp~f~~  262 (316)
T d1fota_         235 LITRDLSQRLGNLQNGTEDVKNHPWFKE  262 (316)
T ss_dssp             HTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             HhhhCHHhccccchhhHHHHHcCccccc
Confidence            9999999996     9999999999983

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-50  Score=381.97  Aligned_cols=221  Identities=21%  Similarity=0.338  Sum_probs=187.4

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------------cCeEE
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------------EGYLK   94 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------------~~~lv   94 (483)
                      |++.+.||+|+||+||+|.++.++..||+|.+.......                                    ..|+|
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            477889999999999999999999999999987643110                                    11899


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNG--IMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      ||||+||+|.+++.+...+++..++.++.||+.||+|||+++  |+||||||+|||+.  +.++.+||+|||+|......
T Consensus        91 mE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~--~~~~~~Kl~DFGla~~~~~~  168 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATLKRAS  168 (270)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGGGGCCTT
T ss_pred             EeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee--CCCCCEEEeecCcceeccCC
Confidence            999999999999998889999999999999999999999999  99999999999994  34678999999999764433


Q ss_pred             ceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH-HHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY-GTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                       .....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.... .....+..+...  .......++++++
T Consensus       169 -~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~  244 (270)
T d1t4ha_         169 -FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPEVKE  244 (270)
T ss_dssp             -SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCCHHHHH
T ss_pred             -ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCC--cccCccCCHHHHH
Confidence             3456789999999999976 6999999999999999999999999775544 444555443221  1122457899999


Q ss_pred             HHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          252 LIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       252 li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ||.+||++||++|||++|+|+||||+
T Consensus       245 li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         245 IIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHHccCCHhHCcCHHHHhCCcccC
Confidence            99999999999999999999999995

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-50  Score=390.89  Aligned_cols=224  Identities=25%  Similarity=0.383  Sum_probs=196.4

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc---------------------------------Ce
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE---------------------------------GY   92 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~---------------------------------~~   92 (483)
                      +....|+.++.||+|+||+||+|+++.+|+.||||++.+......                                 .|
T Consensus        12 dp~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~   91 (309)
T d1u5ra_          12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW   91 (309)
T ss_dssp             CHHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             CcHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEE
Confidence            445679999999999999999999999999999999976542211                                 19


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|||||.||+|..++...+++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|......
T Consensus        92 iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl---~~~~~~Kl~DFG~a~~~~~~  168 (309)
T d1u5ra_          92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPA  168 (309)
T ss_dssp             EEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE---ETTTEEEECCCTTCBSSSSB
T ss_pred             EEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE---CCCCCEEEeecccccccCCC
Confidence            999999999998888888899999999999999999999999999999999999999   56789999999999876433


Q ss_pred             ceecccccCCcccCccccCC---CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          173 KVYEEVVGTPLYMAPELLGP---CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                         ...+||+.|+|||++.+   ..|+.++|||||||++|+|++|..||.+.+....+..+........  ....+|+++
T Consensus       169 ---~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~s~~~  243 (309)
T d1u5ra_         169 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL--QSGHWSEYF  243 (309)
T ss_dssp             ---CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--SCTTSCHHH
T ss_pred             ---CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC--CCCCCCHHH
Confidence               35689999999999854   3588999999999999999999999999888888877776654332  234689999


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      ++||.+||++||.+|||++|+|+||||.
T Consensus       244 ~~li~~~L~~dP~~Rpt~~ell~Hp~~~  271 (309)
T d1u5ra_         244 RNFVDSCLQKIPQDRPTSEVLLKHRFVL  271 (309)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHHHHHHCcCChhHCcCHHHHHhCHHhc
Confidence            9999999999999999999999999997

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.7e-50  Score=394.68  Aligned_cols=220  Identities=29%  Similarity=0.502  Sum_probs=199.3

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC---------------------------------CcCeEEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS---------------------------------DEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------------------------~~~~lv~   95 (483)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+....                                 ...|+|+
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            6899999999999999999999999999999998653210                                 0118999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY  175 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~  175 (483)
                      |||.||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+...  .
T Consensus       121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl---~~~g~ikL~DFG~a~~~~~~--~  195 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGR--T  195 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSC--B
T ss_pred             ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc---CCCCCEEeeeceeeeecccc--c
Confidence            999999999999988899999999999999999999999999999999999999   67789999999999987543  3


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ...+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+....+..+....+.++    +.+|+++.+||.+
T Consensus       196 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~  271 (350)
T d1rdqe_         196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRN  271 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHHHHHH
T ss_pred             ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHHHHH
Confidence            456899999999999998999999999999999999999999999998899999888766543    4789999999999


Q ss_pred             hCccCCCCCC-----CHHHHHcCCcCC
Q 048594          256 MLIRDPNNQI-----TVAQILKHPWLN  277 (483)
Q Consensus       256 ~L~~dP~~R~-----t~~e~L~h~~~~  277 (483)
                      ||++||.+|+     |++++++||||+
T Consensus       272 ~L~~dP~kR~~~~r~t~~ell~Hp~f~  298 (350)
T d1rdqe_         272 LLQVDLTKRFGNLKNGVNDIKNHKWFA  298 (350)
T ss_dssp             HSCSCTTTCTTSSTTTTHHHHTSGGGT
T ss_pred             HhhhCHHhccccccccHHHHHcCcccc
Confidence            9999999995     999999999998

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-50  Score=391.88  Aligned_cols=223  Identities=28%  Similarity=0.487  Sum_probs=199.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC----------------------------------CCcCeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK----------------------------------SDEGYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------------------~~~~~lv   94 (483)
                      ++|.+++.||+|+||+||+|+++.+|+.||||++.+...                                  ....|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            579999999999999999999999999999999975320                                  0111999


Q ss_pred             EeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-c
Q 048594           95 REHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-K  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~  173 (483)
                      ||||+||+|.+++....++++..++.++.||+.||+|||++||+||||||+|||+   +..+.+||+|||++...... .
T Consensus        82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~---~~~~~~kl~DFG~a~~~~~~~~  158 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDA  158 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred             EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee---cCCCceeccccchhhhcccccc
Confidence            9999999999999998999999999999999999999999999999999999999   67789999999999865432 3


Q ss_pred             eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          174 VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      .....+||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+.......+....+.++    +.+|+++++||
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli  234 (320)
T d1xjda_         159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDLL  234 (320)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred             cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHH
Confidence            33456899999999999999999999999999999999999999999999999999887765544    46899999999


Q ss_pred             HHhCccCCCCCCCHH-HHHcCCcCCC
Q 048594          254 RRMLIRDPNNQITVA-QILKHPWLNY  278 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~-e~L~h~~~~~  278 (483)
                      .+||++||.+|||+. ++++||||+.
T Consensus       235 ~~~L~~dP~~R~s~~~~l~~hpff~~  260 (320)
T d1xjda_         235 VKLFVREPEKRLGVRGDIRQHPLFRE  260 (320)
T ss_dssp             HHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             HHhcccCCCCCcCHHHHHHhCchhcc
Confidence            999999999999995 8999999983

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-50  Score=393.38  Aligned_cols=225  Identities=27%  Similarity=0.407  Sum_probs=187.4

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------CeEEE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------GYLKR   95 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------~~lv~   95 (483)
                      ..++|++++.||+|+||+||+|+++.+|+.||+|++........                               .|+||
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            45789999999999999999999999999999999976532111                               19999


Q ss_pred             eccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           96 EHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      |||+||+|.+++.+.+++++..++.++.||+.||.|||+ +||+||||||+|||+   +.++.+||+|||+|....... 
T Consensus        84 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~~~-  159 (322)
T d1s9ja_          84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSM-  159 (322)
T ss_dssp             ECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHHHHHHT-
T ss_pred             EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeE---CCCCCEEEeeCCCccccCCCc-
Confidence            999999999999988899999999999999999999997 599999999999999   677899999999998764332 


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHH-------------------------
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTA-------------------------  229 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~-------------------------  229 (483)
                      ....+||+.|+|||++.+..|+.++||||+||++|+|++|+.||.+.+.......                         
T Consensus       160 ~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (322)
T d1s9ja_         160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS  239 (322)
T ss_dssp             C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------
T ss_pred             cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccc
Confidence            3456899999999999998999999999999999999999999977553221110                         


Q ss_pred             -----------------HHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          230 -----------------IMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       230 -----------------i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                       +....  .+..+...+|+++++||.+||++||.+|||++|+|+||||+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~  302 (322)
T d1s9ja_         240 YGMDSRPPMAIFELLDYIVNEP--PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK  302 (322)
T ss_dssp             ------CCCCHHHHHHHHHTSC--CCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             cccccccchhHHHHHhhhhccC--CccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhC
Confidence                             00000  00111124689999999999999999999999999999997

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.3e-49  Score=395.83  Aligned_cols=225  Identities=27%  Similarity=0.437  Sum_probs=192.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------------CCcCe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------------SDEGY   92 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------------~~~~~   92 (483)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+...                                    .+..|
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            579999999999999999999999999999999864210                                    11129


Q ss_pred             EEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           93 LKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      +|||||+||+|.++|.+...+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||+|..+...
T Consensus        84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl---~~~g~iKl~DFGla~~~~~~  160 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKK  160 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CSSSCEEECCCTTCEECSSS
T ss_pred             EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE---cCCCcEEEeeeceeeecCCC
Confidence            999999999999999988999999999999999999999999999999999999999   67789999999999887654


Q ss_pred             ceecccccCCcccCccccC-CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHH
Q 048594          173 KVYEEVVGTPLYMAPELLG-PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKD  251 (483)
Q Consensus       173 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (483)
                      . ....+||+.|+|||++. +..|+.++|||||||++|+|++|+.||.+........ +.......+...++.+|+++++
T Consensus       161 ~-~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~  238 (364)
T d1omwa3         161 K-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFSPELRS  238 (364)
T ss_dssp             C-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH-HHHHSSSCCCCCCSSSCHHHHH
T ss_pred             c-ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhcccCCCCCCCCCCHHHHH
Confidence            3 34568999999999986 4568999999999999999999999998765433322 2222333333344579999999


Q ss_pred             HHHHhCccCCCCCCC-----HHHHHcCCcCCC
Q 048594          252 LIRRMLIRDPNNQIT-----VAQILKHPWLNY  278 (483)
Q Consensus       252 li~~~L~~dP~~R~t-----~~e~L~h~~~~~  278 (483)
                      ||.+||++||.+|||     ++|+++||||+.
T Consensus       239 li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~  270 (364)
T d1omwa3         239 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS  270 (364)
T ss_dssp             HHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTT
T ss_pred             HHHHHcccCHHHhCCCcccCHHHHHcCccccC
Confidence            999999999999999     799999999983

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-48  Score=375.51  Aligned_cols=227  Identities=24%  Similarity=0.345  Sum_probs=192.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCC-CCEEEEEEeccCCCCCc------------------------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENST-GLQFACKSISKTSKSDE------------------------------------   90 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~avK~~~~~~~~~~------------------------------------   90 (483)
                      .++|++++.||+|+||+||+|++..+ ++.||||++........                                    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            47899999999999999999999766 56799999865321110                                    


Q ss_pred             ----CeEEEeccCCCChHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           91 ----GYLKREHCDGGTLVDRIS-DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        91 ----~~lv~E~~~g~~L~~~l~-~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                          .|+++|||.++.+..... ....+++..++.++.||+.||+|||+++|+||||||+|||+   +..+.+||+|||.
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi---~~~~~~kl~dfg~  162 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGL  162 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECSCCS
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE---cCCCCeeecchhh
Confidence                189999999876654443 34679999999999999999999999999999999999999   6778999999999


Q ss_pred             ceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC-------
Q 048594          166 AFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK-------  238 (483)
Q Consensus       166 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-------  238 (483)
                      +.............||+.|+|||++.+..|+.++||||+||++|+|++|++||.+.+..+.+..+........       
T Consensus       163 ~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  242 (305)
T d1blxa_         163 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD  242 (305)
T ss_dssp             CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred             hhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccc
Confidence            9877655556678899999999999998999999999999999999999999999988888777654211100       


Q ss_pred             ----------------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          239 ----------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       239 ----------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                      ...++.+++.+++||.+||++||.+|||++|+|+||||+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~  297 (305)
T d1blxa_         243 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ  297 (305)
T ss_dssp             CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred             ccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhc
Confidence                            011346789999999999999999999999999999998

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-48  Score=372.28  Aligned_cols=219  Identities=31%  Similarity=0.565  Sum_probs=187.4

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------------   89 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------------   89 (483)
                      ++.++|++.+.||+|+||+||+|+++.+|+.||||++.+....+                                    
T Consensus         1 pl~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~   80 (273)
T d1xwsa_           1 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER   80 (273)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CCCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee
Confidence            36789999999999999999999999999999999987532110                                    


Q ss_pred             --cCeEEEeccCC-CChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           90 --EGYLKREHCDG-GTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        90 --~~~lv~E~~~g-~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                        ..|+|||||.+ +++.+++.....+++..++.++.||+.||+|||++||+||||||+|||++  .+.+.+||+|||+|
T Consensus        81 ~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~--~~~~~vkl~DFG~a  158 (273)
T d1xwsa_          81 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGSG  158 (273)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTC
T ss_pred             CCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEe--cCCCeEEECccccc
Confidence              01999999986 57888888888999999999999999999999999999999999999995  24568999999999


Q ss_pred             eeccCCceecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCC
Q 048594          167 FFFEEGKVYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      ...... ......||+.|+|||++.+..+ +.++||||+||++|+|++|..||.+..      .+......++    +.+
T Consensus       159 ~~~~~~-~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~~~~~~~----~~~  227 (273)
T d1xwsa_         159 ALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR----QRV  227 (273)
T ss_dssp             EECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCCS----SCC
T ss_pred             eecccc-cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch------HHhhcccCCC----CCC
Confidence            875443 3456789999999999976665 577999999999999999999997532      3444444433    468


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      |+++++||.+||.+||.+|||++|+|+||||+
T Consensus       228 s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~  259 (273)
T d1xwsa_         228 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ  259 (273)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHhcCHhhC
Confidence            99999999999999999999999999999997

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-48  Score=375.04  Aligned_cols=222  Identities=28%  Similarity=0.364  Sum_probs=186.1

Q ss_pred             EeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------------cCeEEEec
Q 048594           53 IAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------------EGYLKREH   97 (483)
Q Consensus        53 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------------~~~lv~E~   97 (483)
                      .+++||+|+||+||+|+++.+|+.||||++.......                                   ..|+||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            4789999999999999999999999999987543211                                   11999999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC-ceec
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG-KVYE  176 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~-~~~~  176 (483)
                      |.|+++..++.....+++..+..++.||+.||+|||++||+||||||+|||+   +..+.+||+|||.+...... ....
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli---~~~~~~KL~DFG~a~~~~~~~~~~~  158 (299)
T d1ua2a_          82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYT  158 (299)
T ss_dssp             CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred             hcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe---cCCCccccccCccccccCCCccccc
Confidence            9998887777777889999999999999999999999999999999999999   67789999999999876543 2334


Q ss_pred             ccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC---------------
Q 048594          177 EVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD---------------  240 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~---------------  240 (483)
                      ..+||+.|+|||++.+. .|+.++||||+||++|+|++|.+||.+.+..+.+..+..........               
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~  238 (299)
T d1ua2a_         159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK  238 (299)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred             ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence            56899999999988654 57999999999999999999999999999888888776432111110               


Q ss_pred             ---------CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          241 ---------PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       241 ---------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                               .++.+++++.+||.+||++||++|||++|+|+||||+
T Consensus       239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~  284 (299)
T d1ua2a_         239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS  284 (299)
T ss_dssp             CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGT
T ss_pred             cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhC
Confidence                     0235689999999999999999999999999999998

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.1e-48  Score=372.54  Aligned_cols=229  Identities=24%  Similarity=0.372  Sum_probs=193.6

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-----------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-----------------------------------   90 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-----------------------------------   90 (483)
                      .+.++|.+.+.||+|+||+||+|+++.+|+.||||++.+....+.                                   
T Consensus         4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~   83 (277)
T d1o6ya_           4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG   83 (277)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSS
T ss_pred             CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCC
Confidence            567899999999999999999999999999999999976542211                                   


Q ss_pred             --CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594           91 --GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus        91 --~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                        .|+|||||+|++|.+++...+++++..++.++.||+.||.|||++||+||||||+|||+   +..+.++++|||.+..
T Consensus        84 ~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll---~~~~~~~l~d~~~~~~  160 (277)
T d1o6ya_          84 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARA  160 (277)
T ss_dssp             EEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---ETTSCEEECCCTTCEE
T ss_pred             ceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCccccc---Cccccceeehhhhhhh
Confidence              17999999999999999988999999999999999999999999999999999999999   5677899999999876


Q ss_pred             ccCCc----eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCC
Q 048594          169 FEEGK----VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPT  244 (483)
Q Consensus       169 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  244 (483)
                      .....    .....+||+.|+|||++.+..++.++||||+||++|+|++|.+||.+.+..+....+.......+...++.
T Consensus       161 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (277)
T d1o6ya_         161 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG  240 (277)
T ss_dssp             CC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSS
T ss_pred             hccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccC
Confidence            54322    23456799999999999998899999999999999999999999999988888888887766666566678


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +|+++.+||.+||++||.+||+..+.|.|+|.+
T Consensus       241 ~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         241 LSADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence            999999999999999999999555555667664

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-46  Score=365.50  Aligned_cols=225  Identities=29%  Similarity=0.448  Sum_probs=185.2

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC--------------------------------eEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------------YLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------------------------------~lv~E   96 (483)
                      ++|++++.||+|+||+||+|.++.+|+.||||++.........                                |+|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            5799999999999999999999999999999999765422111                                99999


Q ss_pred             ccCCCChHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC-Cc
Q 048594           97 HCDGGTLVDRIS--DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE-GK  173 (483)
Q Consensus        97 ~~~g~~L~~~l~--~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~-~~  173 (483)
                      ||.++ +.+++.  ....+++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||.|..... ..
T Consensus        82 ~~~~~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~---~~~~~~kl~DFG~a~~~~~~~~  157 (298)
T d1gz8a_          82 FLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVR  157 (298)
T ss_dssp             CCSEE-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTHHHHHCCCSB
T ss_pred             ecCCc-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheee---cccCcceeccCCcceeccCCcc
Confidence            99875 444443  24679999999999999999999999999999999999999   6778999999999987653 23


Q ss_pred             eecccccCCcccCccccCCCCC-CCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCC------------
Q 048594          174 VYEEVVGTPLYMAPELLGPCKY-GKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSD------------  240 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~------------  240 (483)
                      ......||+.|+|||++....+ +.++|+||+||++|+|++|+.||.+.+....+..+..........            
T Consensus       158 ~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  237 (298)
T d1gz8a_         158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK  237 (298)
T ss_dssp             CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             cceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccc
Confidence            3445689999999998876554 789999999999999999999999988877777665422111110            


Q ss_pred             -------------CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          241 -------------PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       241 -------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                   ..+.+++++++||.+||++||.+|||++|+|+||||+
T Consensus       238 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~  287 (298)
T d1gz8a_         238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ  287 (298)
T ss_dssp             TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred             cccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhc
Confidence                         0235689999999999999999999999999999997

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-46  Score=365.99  Aligned_cols=227  Identities=26%  Similarity=0.405  Sum_probs=188.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc-------------------------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE-------------------------------------   90 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------------------------   90 (483)
                      -++|++++.||+|+||+||+|+++.+|+.||||++........                                     
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            3689999999999999999999999999999999865532211                                     


Q ss_pred             ---CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           91 ---GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        91 ---~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                         .|+|||||.++.+.........+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl---~~~~~~kl~dfg~~~  165 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLAR  165 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCE
T ss_pred             CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheee---cCCCcEEeeecceee
Confidence               18999999987766666666789999999999999999999999999999999999999   677899999999997


Q ss_pred             eccCCc-----eecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCC
Q 048594          168 FFEEGK-----VYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDP  241 (483)
Q Consensus       168 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  241 (483)
                      ......     .....+||+.|+|||++.+. .++.++||||+||++|+|++|++||.+.+.......+......+....
T Consensus       166 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  245 (318)
T d3blha1         166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV  245 (318)
T ss_dssp             ECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred             ecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhh
Confidence            664322     22345799999999998754 689999999999999999999999999888887777665443333222


Q ss_pred             CCC----------------------------CCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          242 WPT----------------------------ISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       242 ~~~----------------------------~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                      +..                            .++++.+||.+||++||++|||++|+|+||||+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~  309 (318)
T d3blha1         246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW  309 (318)
T ss_dssp             STTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGS
T ss_pred             ccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhc
Confidence            111                            267889999999999999999999999999998

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.3e-46  Score=360.09  Aligned_cols=225  Identities=30%  Similarity=0.410  Sum_probs=186.4

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC--------------------------------eEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------------YLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------------------------------~lv~E   96 (483)
                      ++|++++.||+|+||+||+|+++ +|+.||||++.........                                |+++|
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e   80 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEE
Confidence            58999999999999999999986 7899999999765422111                                99999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-ee
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~  175 (483)
                      |+.++.+..+....+.+++..+..++.||+.||+|||+.+|+||||||+|||+   +.++.+||+|||.+....... ..
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll---~~~~~~kl~DfG~a~~~~~~~~~~  157 (286)
T d1ob3a_          81 HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKY  157 (286)
T ss_dssp             CCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC-----
T ss_pred             eehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE---cCCCCEEecccccceecccCcccc
Confidence            99987777777778899999999999999999999999999999999999999   677899999999998765332 23


Q ss_pred             cccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCC---------------
Q 048594          176 EEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKS---------------  239 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------  239 (483)
                      ....|++.|+|||.+.+. .++.++|+||+||++|+|++|++||.+.+..+.+.++.........               
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T d1ob3a_         158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN  237 (286)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred             ceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccc
Confidence            445789999999998764 4689999999999999999999999998887777766532111110               


Q ss_pred             ----------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          240 ----------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       240 ----------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                ...+.+++++++||.+||++||++|||++|+|+||||+
T Consensus       238 ~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~  285 (286)
T d1ob3a_         238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK  285 (286)
T ss_dssp             CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred             cccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence                      11245789999999999999999999999999999996

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-46  Score=369.01  Aligned_cols=228  Identities=25%  Similarity=0.332  Sum_probs=188.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCc--------------------------------CeEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDE--------------------------------GYLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------------------------~~lv~E   96 (483)
                      -+|+.+++||+|+||+||+|+++.+|+.||||++........                                .|+|||
T Consensus        20 ~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~E   99 (350)
T d1q5ka_          20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD   99 (350)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEE
T ss_pred             CCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEe
Confidence            369999999999999999999999999999999976542110                                178999


Q ss_pred             ccCCCChH---HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           97 HCDGGTLV---DRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        97 ~~~g~~L~---~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ||+++.+.   .+.....++++..++.++.||+.||+|||++||+||||||+|||+..  +...+||+|||++.......
T Consensus       100 y~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~--~~~~~kl~DFG~a~~~~~~~  177 (350)
T d1q5ka_         100 YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGE  177 (350)
T ss_dssp             CCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT--TTCCEEECCCTTCEECCTTS
T ss_pred             ccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEec--CCCceeEecccchhhccCCc
Confidence            99875322   22345678999999999999999999999999999999999999942  23479999999999887666


Q ss_pred             eecccccCCcccCccccCC-CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccc-----------------c
Q 048594          174 VYEEVVGTPLYMAPELLGP-CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSRE-----------------I  235 (483)
Q Consensus       174 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~-----------------~  235 (483)
                      .....+||+.|+|||.+.+ ..++.++||||+||++|+|++|.+||.+.+..+.+..+....                 .
T Consensus       178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~  257 (350)
T d1q5ka_         178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF  257 (350)
T ss_dssp             CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CC
T ss_pred             ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhc
Confidence            6677889999999998765 468999999999999999999999999888777766664310                 0


Q ss_pred             CCC--------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          236 DFK--------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       236 ~~~--------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                      .++        ....+..++++.+||.+||++||.+|||+.|+|+||||+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  308 (350)
T d1q5ka_         258 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE  308 (350)
T ss_dssp             CCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             cccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            111        0113467899999999999999999999999999999973

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-46  Score=369.78  Aligned_cols=232  Identities=26%  Similarity=0.426  Sum_probs=187.1

Q ss_pred             ccccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC------------------------------
Q 048594           40 LGKAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD------------------------------   89 (483)
Q Consensus        40 ~~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~------------------------------   89 (483)
                      ++++..++.++|++++.||+|+||+||+|+++.+|+.||||++.+.....                              
T Consensus         9 ~~~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~   88 (346)
T d1cm8a_           9 VTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTP   88 (346)
T ss_dssp             CSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECS
T ss_pred             ccCceeecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEecc
Confidence            34455678999999999999999999999999999999999997542110                              


Q ss_pred             --------cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEe
Q 048594           90 --------EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKAT  161 (483)
Q Consensus        90 --------~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~  161 (483)
                              ..|+||||| |.+|...+. ..++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+
T Consensus        89 ~~~~~~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~---~~~~~~kl~  163 (346)
T d1cm8a_          89 DETLDDFTDFYLVMPFM-GTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKIL  163 (346)
T ss_dssp             CSSTTTCCCCEEEEECC-SEEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEEC
T ss_pred             CccccccceEEEEEecc-cccHHHHHH-hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc---ccccccccc
Confidence                    128999999 556766665 4589999999999999999999999999999999999999   678899999


Q ss_pred             ecccceeccCCceecccccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC----
Q 048594          162 DFGLAFFFEEGKVYEEVVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID----  236 (483)
Q Consensus       162 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~----  236 (483)
                      |||.|......  .....||+.|+|||++.+. .++.++||||+||++|+|++|.+||.+.+....+..+......    
T Consensus       164 Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~  241 (346)
T d1cm8a_         164 DFGLARQADSE--MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE  241 (346)
T ss_dssp             CCTTCEECCSS--CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             cccceeccCCc--cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHH
Confidence            99999876543  3457899999999988654 5689999999999999999999999988876666554432111    


Q ss_pred             -------------------CCC----CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          237 -------------------FKS----DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       237 -------------------~~~----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                         ...    ...+.+++++.+||.+||.+||.+|||++|+|+||||+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~  306 (346)
T d1cm8a_         242 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES  306 (346)
T ss_dssp             HHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             HHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCc
Confidence                               111    123567899999999999999999999999999999983

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-46  Score=367.40  Aligned_cols=229  Identities=29%  Similarity=0.437  Sum_probs=186.2

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------------c
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------------E   90 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------------~   90 (483)
                      ++..+|++++.||+|+||+||+|.++.+|+.||||++.+.....                                   .
T Consensus         5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~   84 (345)
T d1pmea_           5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK   84 (345)
T ss_dssp             CCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             CcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccc
Confidence            56789999999999999999999999999999999997543110                                   0


Q ss_pred             CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           91 GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      .+++++|+.|++|.+++... ++++..++.++.||+.||+|||++||+||||||+|||+   +..+.+||+|||++....
T Consensus        85 ~~~l~~~~~~g~L~~~l~~~-~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl---~~~~~~kl~DfG~a~~~~  160 (345)
T d1pmea_          85 DVYLVTHLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVAD  160 (345)
T ss_dssp             CEEEEEECCCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECC
T ss_pred             eEEEEEeecCCchhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEE---CCCCCEEEcccCceeecc
Confidence            14566677789999999765 79999999999999999999999999999999999999   677899999999998764


Q ss_pred             CCce----ecccccCCcccCccccC-CCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC---------
Q 048594          171 EGKV----YEEVVGTPLYMAPELLG-PCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID---------  236 (483)
Q Consensus       171 ~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~---------  236 (483)
                      ....    ....+||+.|+|||++. +..++.++||||+||++|+|++|..||.+................         
T Consensus       161 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (345)
T d1pmea_         161 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI  240 (345)
T ss_dssp             GGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTC
T ss_pred             CCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhh
Confidence            3322    24467999999999984 445789999999999999999999999888766555544321110         


Q ss_pred             -----------CCC-------CCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          237 -----------FKS-------DPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       237 -----------~~~-------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                 .+.       ..++.+++++++||.+||++||.+|||++|+|+||||+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~  300 (345)
T d1pmea_         241 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ  300 (345)
T ss_dssp             CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             hhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence                       000       113568899999999999999999999999999999983

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.4e-45  Score=362.77  Aligned_cols=225  Identities=26%  Similarity=0.477  Sum_probs=185.5

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCC------------------------------CCcCeEEEec
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSK------------------------------SDEGYLKREH   97 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------------------~~~~~lv~E~   97 (483)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+...                              ....|+||||
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~  113 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH  113 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEEC
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEee
Confidence            4689999999999999999999999999999999876431                              0112899999


Q ss_pred             cCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecc
Q 048594           98 CDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE  177 (483)
Q Consensus        98 ~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~  177 (483)
                      |.+++|....   +++++..++.++.||+.||.|||++||+||||||+|||++  ..+..+||+|||+|...........
T Consensus       114 ~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~--~~~~~vkl~DFG~a~~~~~~~~~~~  188 (328)
T d3bqca1         114 VNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYNV  188 (328)
T ss_dssp             CCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECCGGGCEECCTTCCCCS
T ss_pred             cCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEc--CCCCeeeecccccceeccCCCcccc
Confidence            9999987764   5799999999999999999999999999999999999995  2345799999999998877666677


Q ss_pred             cccCCcccCccccCCC-CCCCcCchHHHHHHHHHHhhCCCCCCCCCh-HHHHHHHHc-------------cccC------
Q 048594          178 VVGTPLYMAPELLGPC-KYGKEIDIWSAGLILYNLLSGAQPFWAESL-YGTLTAIMS-------------REID------  236 (483)
Q Consensus       178 ~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~~ll~g~~pf~~~~~-~~~~~~i~~-------------~~~~------  236 (483)
                      .++|+.|+|||.+.+. .++.++|+||+||++|+|++|..||..... ......+..             ....      
T Consensus       189 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  268 (328)
T d3bqca1         189 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN  268 (328)
T ss_dssp             CCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGG
T ss_pred             cccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccc
Confidence            8899999999998765 478999999999999999999999976543 222222211             0000      


Q ss_pred             --------------CCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          237 --------------FKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       237 --------------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                    ........+++++.+||.+||++||.+|||++|+|+||||+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~  323 (328)
T d3bqca1         269 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY  323 (328)
T ss_dssp             GTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             hhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence                          01112234789999999999999999999999999999998

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=362.58  Aligned_cols=220  Identities=20%  Similarity=0.266  Sum_probs=184.8

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCC-----EEEEEEeccCCCCC--------------------------------cC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGL-----QFACKSISKTSKSD--------------------------------EG   91 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~avK~~~~~~~~~--------------------------------~~   91 (483)
                      ++|++.+.||+|+||+||+|+++.+++     .||+|.+.......                                ..
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~  116 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  116 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence            689999999999999999999876654     69999986543211                                11


Q ss_pred             eEEEeccCCCChHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEE
Q 048594           92 YLKREHCDGGTLVDRISDR-----------------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFI  148 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~-----------------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIl  148 (483)
                      |+|||||+||+|.++|...                       ..+++..+..++.||+.||+|||+++|+||||||+|||
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nil  196 (325)
T d1rjba_         117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL  196 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEE
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccc
Confidence            9999999999999999764                       24899999999999999999999999999999999999


Q ss_pred             EeeCCCCCcEEEeecccceeccCCc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChH
Q 048594          149 FTTDDENATLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLY  224 (483)
Q Consensus       149 l~~~~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~  224 (483)
                      +   +.++.+||+|||+|+......   ......||+.|+|||++.+..++.++||||+||++|+|++ |.+||.+.+..
T Consensus       197 l---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~  273 (325)
T d1rjba_         197 V---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD  273 (325)
T ss_dssp             E---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             c---ccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH
Confidence            9   567899999999998765433   2234568999999999988899999999999999999997 89999887766


Q ss_pred             HHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          225 GTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       225 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ..+..+......++.  +..+|+++++||.+||+.||++|||++|+++|
T Consensus       274 ~~~~~~~~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         274 ANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             HHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHhcCCCCCC--CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            666666655544332  35789999999999999999999999999875

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-46  Score=362.02  Aligned_cols=226  Identities=31%  Similarity=0.514  Sum_probs=190.9

Q ss_pred             cceEEeeeecccCceeEEEEEE---CCCCCEEEEEEeccCCCC------Cc-----------------------------
Q 048594           49 LHFTIAEELCRGESGRIYLCTE---NSTGLQFACKSISKTSKS------DE-----------------------------   90 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~---~~~~~~~avK~~~~~~~~------~~-----------------------------   90 (483)
                      ++|++++.||+|+||+||+|.+   +.+|+.||||++.+....      ..                             
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            6799999999999999999987   457899999998654210      00                             


Q ss_pred             CeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceecc
Q 048594           91 GYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFE  170 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~  170 (483)
                      .|+|+|||.|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..+.
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill---~~~~~vkL~DFG~a~~~~  180 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFV  180 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEECC
T ss_pred             eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceee---cCCCCEEEeeccchhhhc
Confidence            09999999999999999998999999999999999999999999999999999999999   667899999999998764


Q ss_pred             CC--ceecccccCCcccCccccCCC--CCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          171 EG--KVYEEVVGTPLYMAPELLGPC--KYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       171 ~~--~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ..  .......|++.|+|||.+.+.  .++.++|||||||++|+|++|..||.+.........+.........+.+..+|
T Consensus       181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s  260 (322)
T d1vzoa_         181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS  260 (322)
T ss_dssp             GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSC
T ss_pred             ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCC
Confidence            32  233456799999999998654  35789999999999999999999998876665555555544444444445789


Q ss_pred             HHHHHHHHHhCccCCCCCC-----CHHHHHcCCcCC
Q 048594          247 SSAKDLIRRMLIRDPNNQI-----TVAQILKHPWLN  277 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~-----t~~e~L~h~~~~  277 (483)
                      +++++||.+||++||.+||     |++|+|+||||+
T Consensus       261 ~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~  296 (322)
T d1vzoa_         261 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ  296 (322)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGT
T ss_pred             HHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhc
Confidence            9999999999999999999     589999999997

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.6e-45  Score=353.30  Aligned_cols=219  Identities=19%  Similarity=0.291  Sum_probs=183.5

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEecc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKREHC   98 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E~~   98 (483)
                      .++|++.+.||+|+||+||+|.++.+|+.||||++......                             +..|+|||||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~   95 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   95 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecc
Confidence            46899999999999999999999999999999999765421                             1129999999


Q ss_pred             CCCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--e
Q 048594           99 DGGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--V  174 (483)
Q Consensus        99 ~g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--~  174 (483)
                      ++|+|.+++...  ..+++..+..++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|+......  .
T Consensus        96 ~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFG~a~~~~~~~~~~  172 (287)
T d1opja_          96 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDTYTA  172 (287)
T ss_dssp             TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCCTTTCCSSSSEE
T ss_pred             cCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEE---CCCCcEEEccccceeecCCCCcee
Confidence            999999999754  578999999999999999999999999999999999999   667899999999998765432  2


Q ss_pred             ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCC-CChHHHHHHHHccccCCCCCCCCCCCHHHHHHH
Q 048594          175 YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWA-ESLYGTLTAIMSREIDFKSDPWPTISSSAKDLI  253 (483)
Q Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (483)
                      .....|++.|+|||++.+..|+.++||||+||++|+|++|..||.. .+.......+..+ ..  .+.++.+|+++.+||
T Consensus       173 ~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~-~~--~~~~~~~~~~l~~li  249 (287)
T d1opja_         173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YR--MERPEGCPEKVYELM  249 (287)
T ss_dssp             ETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-CC--CCCCTTCCHHHHHHH
T ss_pred             eccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC-CC--CCCCccchHHHHHHH
Confidence            2334588999999999888999999999999999999997666554 4444444444433 22  223357899999999


Q ss_pred             HHhCccCCCCCCCHHHHHc
Q 048594          254 RRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       254 ~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+||+.||.+|||++++++
T Consensus       250 ~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         250 RACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHH
Confidence            9999999999999999976

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-45  Score=353.29  Aligned_cols=220  Identities=23%  Similarity=0.379  Sum_probs=178.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-------------------------------cCeEEEe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-------------------------------EGYLKRE   96 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E   96 (483)
                      .++|.+.+.||+|+||+||+|+.+   ..||||++.......                               ..|+|||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEe
Confidence            367999999999999999999764   369999997653221                               1199999


Q ss_pred             ccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--
Q 048594           97 HCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--  173 (483)
Q Consensus        97 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--  173 (483)
                      ||+||+|.+++... .++++..+..++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||+|.......  
T Consensus        84 y~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl---~~~~~~Kl~DFGla~~~~~~~~~  160 (276)
T d1uwha_          84 WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGS  160 (276)
T ss_dssp             CCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTSSEEECCCCCSCC-------
T ss_pred             cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEE---cCCCCEEEccccceeeccccCCc
Confidence            99999999999754 679999999999999999999999999999999999999   567899999999998764322  


Q ss_pred             -eecccccCCcccCccccCC---CCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC--CCCCCCCCH
Q 048594          174 -VYEEVVGTPLYMAPELLGP---CKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK--SDPWPTISS  247 (483)
Q Consensus       174 -~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~  247 (483)
                       ......||+.|+|||++.+   ..|+.++||||+||++|+|++|+.||.+.+....+..+.......+  ....+.+|+
T Consensus       161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  240 (276)
T d1uwha_         161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK  240 (276)
T ss_dssp             -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCH
T ss_pred             ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchH
Confidence             2345679999999999864   3478899999999999999999999988766555444443322221  223457899


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      ++.+||.+||..||.+|||++|++++
T Consensus       241 ~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         241 AMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999999999875

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-44  Score=349.10  Aligned_cols=226  Identities=26%  Similarity=0.431  Sum_probs=188.4

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC--------------------------------eEEEe
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG--------------------------------YLKRE   96 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------------------------------~lv~E   96 (483)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.........                                ++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            5899999999999999999999999999999999765432211                                89999


Q ss_pred             ccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc-ee
Q 048594           97 HCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK-VY  175 (483)
Q Consensus        97 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~-~~  175 (483)
                      ++.|++|..++...+.+++..++.++.|++.||+|||++||+||||||+|||+   +..+.+||+|||.+....... ..
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli---~~~~~~kl~DFG~a~~~~~~~~~~  158 (292)
T d1unla_          82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSCCSCC
T ss_pred             eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccc---ccCCceeeeecchhhcccCCCccc
Confidence            99999999988888999999999999999999999999999999999999999   567789999999998765433 33


Q ss_pred             cccccCCcccCccccCCCC-CCCcCchHHHHHHHHHHhhCCCCCC-CCChHHHHHHHHccccCCC---------------
Q 048594          176 EEVVGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFW-AESLYGTLTAIMSREIDFK---------------  238 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~~ll~g~~pf~-~~~~~~~~~~i~~~~~~~~---------------  238 (483)
                      ....+++.|+|||++.+.. ++.++||||+||++|+|++|..||. +.+..+....+........               
T Consensus       159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (292)
T d1unla_         159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP  238 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred             eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence            3456788899999987655 5899999999999999999999864 4454555555432111110               


Q ss_pred             ----------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          239 ----------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       239 ----------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                ....+.+++.+.+||.+||++||.+|||++|+|+||||+
T Consensus       239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~  287 (292)
T d1unla_         239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS  287 (292)
T ss_dssp             CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGS
T ss_pred             cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhc
Confidence                      111245789999999999999999999999999999997

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-45  Score=346.17  Aligned_cols=218  Identities=19%  Similarity=0.309  Sum_probs=176.5

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------cCeEEEeccC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------EGYLKREHCD   99 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~lv~E~~~   99 (483)
                      ++|++.+.||+|+||+||+|+++ ++..||||++.......                             ..|+|||||+
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            57999999999999999999987 56789999997654221                             1299999999


Q ss_pred             CCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce--ec
Q 048594          100 GGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV--YE  176 (483)
Q Consensus       100 g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~--~~  176 (483)
                      +|+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+++.......  ..
T Consensus        84 ~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~~~~~~~~~~~  160 (263)
T d1sm2a_          84 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSST  160 (263)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEE---CGGGCEEECSCC--------------
T ss_pred             CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheee---cCCCCeEecccchheeccCCCceeec
Confidence            99999998755 678999999999999999999999999999999999999   6778999999999987654322  23


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ...||+.|+|||++.+..++.++||||+||++|||++ |.+||...+..+....+..+....   .....++++.+||.+
T Consensus       161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~---~p~~~~~~l~~li~~  237 (263)
T d1sm2a_         161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY---KPRLASTHVYQIMNH  237 (263)
T ss_dssp             ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCC---CCTTSCHHHHHHHHH
T ss_pred             ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCC---CccccCHHHHHHHHH
Confidence            4578999999999999899999999999999999999 577777777777777777653322   224678999999999


Q ss_pred             hCccCCCCCCCHHHHHcC
Q 048594          256 MLIRDPNNQITVAQILKH  273 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h  273 (483)
                      ||+.||.+|||++|+++|
T Consensus       238 cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         238 CWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HccCCHhHCcCHHHHHHH
Confidence            999999999999999875

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-45  Score=364.00  Aligned_cols=231  Identities=28%  Similarity=0.403  Sum_probs=190.4

Q ss_pred             ccccccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC--------------------------------
Q 048594           42 KAYEDIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD--------------------------------   89 (483)
Q Consensus        42 ~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------------------   89 (483)
                      .+..++.++|++++.||+|+||+||+|+++.+|+.||||++.+.....                                
T Consensus        11 ~~~~~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~   90 (348)
T d2gfsa1          11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR   90 (348)
T ss_dssp             SSEEEEETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred             CccccCCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeecc
Confidence            344567889999999999999999999999999999999997543110                                


Q ss_pred             -----cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecc
Q 048594           90 -----EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFG  164 (483)
Q Consensus        90 -----~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg  164 (483)
                           ..+++++||.||+|.+++.. +++++..++.++.||+.||+|||++||+||||||+|||+   +.++.+|++|||
T Consensus        91 ~~~~~~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi---~~~~~~kl~dfg  166 (348)
T d2gfsa1          91 SLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFG  166 (348)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCC-
T ss_pred             ccccCceEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc---cccccccccccc
Confidence                 11677788889999998865 479999999999999999999999999999999999999   677899999999


Q ss_pred             cceeccCCceecccccCCcccCccccCCCC-CCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccCCC-----
Q 048594          165 LAFFFEEGKVYEEVVGTPLYMAPELLGPCK-YGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREIDFK-----  238 (483)
Q Consensus       165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-----  238 (483)
                      .+.....  ......|++.|+|||++.+.. ++.++||||+||++|+|++|.+||.+.+.......+........     
T Consensus       167 ~a~~~~~--~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~  244 (348)
T d2gfsa1         167 LARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK  244 (348)
T ss_dssp             ---CCTG--GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred             hhcccCc--ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence            9976532  334567899999999876654 58899999999999999999999999888777777654322211     


Q ss_pred             ------------------CC----CCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCCC
Q 048594          239 ------------------SD----PWPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLNY  278 (483)
Q Consensus       239 ------------------~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~~  278 (483)
                                        ..    .+..+++++++||.+||+.||.+|||++|+|+||||+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~  306 (348)
T d2gfsa1         245 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  306 (348)
T ss_dssp             TCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             hccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCC
Confidence                              00    12467899999999999999999999999999999983

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-45  Score=350.24  Aligned_cols=223  Identities=19%  Similarity=0.285  Sum_probs=188.5

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------CcCeEEEeccC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------DEGYLKREHCD   99 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------~~~~lv~E~~~   99 (483)
                      .++|++.+.||+|+||+||+|.++ ++..||||++......                            +..|+|||||+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~   90 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYME   90 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCT
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCC
Confidence            468999999999999999999986 6788999999765421                            11299999999


Q ss_pred             CCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce--e
Q 048594          100 GGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV--Y  175 (483)
Q Consensus       100 g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~--~  175 (483)
                      +|+|.+++...  .++++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+.+.....  .
T Consensus        91 ~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll---~~~~~~Kl~DFGla~~~~~~~~~~~  167 (272)
T d1qpca_          91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNEYTAR  167 (272)
T ss_dssp             TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECSSSCEECC
T ss_pred             CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee---ecccceeeccccceEEccCCccccc
Confidence            99999987544  369999999999999999999999999999999999999   6778999999999998765432  2


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhC-CCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG-AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....||+.|+|||++....++.++||||+||++|+|+|| .+||......+....+..+...   ...+.+|+++.+||.
T Consensus       168 ~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~---~~p~~~~~~l~~li~  244 (272)
T d1qpca_         168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM---VRPDNCPEELYQLMR  244 (272)
T ss_dssp             TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHH
T ss_pred             cccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC---CCcccChHHHHHHHH
Confidence            345789999999999888899999999999999999995 5566666777777777665322   123578999999999


Q ss_pred             HhCccCCCCCCCHHHHHc--CCcCC
Q 048594          255 RMLIRDPNNQITVAQILK--HPWLN  277 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~--h~~~~  277 (483)
                      +||+.||.+|||++++++  |+||.
T Consensus       245 ~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         245 LCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            999999999999999988  77875

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-45  Score=350.60  Aligned_cols=217  Identities=18%  Similarity=0.256  Sum_probs=180.9

Q ss_pred             eeecccCceeEEEEEEC--CCCCEEEEEEeccCCCCC-------------------------------cCeEEEeccCCC
Q 048594           55 EELCRGESGRIYLCTEN--STGLQFACKSISKTSKSD-------------------------------EGYLKREHCDGG  101 (483)
Q Consensus        55 ~~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~~-------------------------------~~~lv~E~~~g~  101 (483)
                      +.||+|+||+||+|.++  .+++.||||++.......                               ..|+|||||++|
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g   92 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG   92 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence            46999999999999864  456789999996543211                               119999999999


Q ss_pred             ChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCcee----cc
Q 048594          102 TLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVY----EE  177 (483)
Q Consensus       102 ~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~----~~  177 (483)
                      +|.+++.+..++++..+..++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||+++.+......    ..
T Consensus        93 ~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill---~~~~~~kl~DFGla~~~~~~~~~~~~~~~  169 (277)
T d1xbba_          93 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTH  169 (277)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTTCEECCTTCSEEEC---
T ss_pred             cHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcc---cccCcccccchhhhhhccccccccccccc
Confidence            999999999999999999999999999999999999999999999999   45679999999999876543221    23


Q ss_pred             cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHh
Q 048594          178 VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM  256 (483)
Q Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  256 (483)
                      ..||+.|+|||++.+..++.++|||||||++|||++ |.+||.+.+..+....+..+...   +..+.+|+++.+||.+|
T Consensus       170 ~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~~~~li~~c  246 (277)
T d1xbba_         170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPAGCPREMYDLMNLC  246 (277)
T ss_dssp             -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHH
T ss_pred             cCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCC---CCCcccCHHHHHHHHHH
Confidence            468999999999988889999999999999999997 89999998888888877765322   22256899999999999


Q ss_pred             CccCCCCCCCHHHH---HcCCcCC
Q 048594          257 LIRDPNNQITVAQI---LKHPWLN  277 (483)
Q Consensus       257 L~~dP~~R~t~~e~---L~h~~~~  277 (483)
                      |+.||.+|||++++   |+|+|+.
T Consensus       247 l~~dp~~RPs~~~i~~~L~~~~~~  270 (277)
T d1xbba_         247 WTYDVENRPGFAAVELRLRNYYYD  270 (277)
T ss_dssp             TCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             cCCCHhHCcCHHHHHHHhhCHHhh
Confidence            99999999999998   4566653

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-45  Score=360.53  Aligned_cols=226  Identities=26%  Similarity=0.406  Sum_probs=176.2

Q ss_pred             ccccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-------------------------------------
Q 048594           46 DIKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-------------------------------------   88 (483)
Q Consensus        46 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------------------   88 (483)
                      .+.++|+++++||+|+||+||+|.++.+|+.||||++.+....                                     
T Consensus        14 ~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~   93 (355)
T d2b1pa1          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE   93 (355)
T ss_dssp             EEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred             eecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccccccc
Confidence            3557899999999999999999999999999999999754211                                     


Q ss_pred             -CcCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccce
Q 048594           89 -DEGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAF  167 (483)
Q Consensus        89 -~~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~  167 (483)
                       ...|+|||||.|+ +.+.+.  ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.++++|||.+.
T Consensus        94 ~~~~~iv~Ey~~~~-l~~~~~--~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~---~~~~~~kl~df~~~~  167 (355)
T d2b1pa1          94 FQDVYLVMELMDAN-LCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR  167 (355)
T ss_dssp             CCEEEEEEECCSEE-HHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC--
T ss_pred             CceeEEEEeccchH-HHHhhh--cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccc---ccccceeeechhhhh
Confidence             1118999999775 555553  468999999999999999999999999999999999999   667889999999998


Q ss_pred             eccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHHHccccC-----------
Q 048594          168 FFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAIMSREID-----------  236 (483)
Q Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----------  236 (483)
                      ...........+||+.|+|||++.+..+++++||||+||++|+|++|++||.+.+.......+......           
T Consensus       168 ~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (355)
T d2b1pa1         168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP  247 (355)
T ss_dssp             -------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCH
T ss_pred             ccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhh
Confidence            877666666778999999999999989999999999999999999999999988877666655432111           


Q ss_pred             -----------CCCCC----------------CCCCCHHHHHHHHHhCccCCCCCCCHHHHHcCCcCC
Q 048594          237 -----------FKSDP----------------WPTISSSAKDLIRRMLIRDPNNQITVAQILKHPWLN  277 (483)
Q Consensus       237 -----------~~~~~----------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h~~~~  277 (483)
                                 .....                ....++++.+||.+||.+||++||||+|+|+||||+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~  315 (355)
T d2b1pa1         248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN  315 (355)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred             hHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccC
Confidence                       00000                012357789999999999999999999999999998

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-45  Score=350.05  Aligned_cols=223  Identities=19%  Similarity=0.263  Sum_probs=186.8

Q ss_pred             cceEEeee-ecccCceeEEEEEECCC--CCEEEEEEeccCCCC------------------------------CcCeEEE
Q 048594           49 LHFTIAEE-LCRGESGRIYLCTENST--GLQFACKSISKTSKS------------------------------DEGYLKR   95 (483)
Q Consensus        49 ~~y~~~~~-lg~G~~g~V~~~~~~~~--~~~~avK~~~~~~~~------------------------------~~~~lv~   95 (483)
                      ++|.+.+. ||+|+||+||+|.++.+  +..||||++......                              +..|+||
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvm   87 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM   87 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEE
Confidence            56888885 99999999999987644  457999999764321                              1119999


Q ss_pred             eccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce
Q 048594           96 EHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV  174 (483)
Q Consensus        96 E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~  174 (483)
                      |||+||+|.+++... ..+++..+..++.||+.||+|||+++|+||||||+|||++   .++.+||+|||+++.+.....
T Consensus        88 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~---~~~~~Kl~DFGla~~~~~~~~  164 (285)
T d1u59a_          88 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKALGADDS  164 (285)
T ss_dssp             ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---ETTEEEECCCTTCEECTTCSC
T ss_pred             EeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeec---cCCceeeccchhhhccccccc
Confidence            999999999998654 6799999999999999999999999999999999999994   567899999999988754332


Q ss_pred             e----cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          175 Y----EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       175 ~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      .    ....||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..+....+..+...   +..+.+|+++
T Consensus       165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~l  241 (285)
T d1u59a_         165 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPECPPEL  241 (285)
T ss_dssp             EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC---CCCTTCCHHH
T ss_pred             ccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCcCCHHH
Confidence            2    23468899999999988889999999999999999998 99999988888888887765432   2235789999


Q ss_pred             HHHHHHhCccCCCCCCCHHHH---HcCCcCC
Q 048594          250 KDLIRRMLIRDPNNQITVAQI---LKHPWLN  277 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~---L~h~~~~  277 (483)
                      .+||.+||..||.+|||+.++   |+|+|+.
T Consensus       242 ~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         242 YALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            999999999999999999877   5677774

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.5e-44  Score=350.03  Aligned_cols=220  Identities=21%  Similarity=0.322  Sum_probs=176.2

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCC---EEEEEEeccCCCC-------------------------------CcCeE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGL---QFACKSISKTSKS-------------------------------DEGYL   93 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~avK~~~~~~~~-------------------------------~~~~l   93 (483)
                      .++|++.+.||+|+||+||+|.++.+|+   .+|||.+......                               ...|+
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~i  104 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI  104 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            4689999999999999999999987765   5899988654311                               12299


Q ss_pred             EEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |||||+||+|.+++... +.+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+++.+...
T Consensus       105 v~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~~~~  181 (299)
T d1jpaa_         105 ITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEDD  181 (299)
T ss_dssp             EEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC---------
T ss_pred             EEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE---CCCCcEEECCcccceEccCC
Confidence            99999999999988774 579999999999999999999999999999999999999   67789999999999876543


Q ss_pred             cee------cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCC
Q 048594          173 KVY------EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTI  245 (483)
Q Consensus       173 ~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (483)
                      ...      ....||+.|+|||.+.+..++.++|||||||++|||+| |.+||.+....+....+..+..   .+....+
T Consensus       182 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~  258 (299)
T d1jpaa_         182 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYR---LPPPMDC  258 (299)
T ss_dssp             --------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC---CCCCTTC
T ss_pred             CCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCccc
Confidence            221      12457899999999988899999999999999999998 8999999888888888776532   2233578


Q ss_pred             CHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          246 SSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       246 ~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      |+++.+||.+||+.||.+|||+.|++++
T Consensus       259 ~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         259 PSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             hHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            9999999999999999999999998763

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-45  Score=354.66  Aligned_cols=221  Identities=19%  Similarity=0.257  Sum_probs=174.0

Q ss_pred             ccceEEeeeecccCceeEEEEEECC-----CCCEEEEEEeccCCC---------------------------------CC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENS-----TGLQFACKSISKTSK---------------------------------SD   89 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~---------------------------------~~   89 (483)
                      .++|.+.+.||+|+||.||+|.+..     +++.||||++.....                                 ..
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            4689999999999999999999754     457899999865321                                 11


Q ss_pred             cCeEEEeccCCCChHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC
Q 048594           90 EGYLKREHCDGGTLVDRISDR----------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD  153 (483)
Q Consensus        90 ~~~lv~E~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~  153 (483)
                      ..|+|||||+||+|.+++...                ..+++..+..++.||+.||.|||+++|+||||||+|||+   +
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl---~  168 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---S  168 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---C
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE---C
Confidence            229999999999999999753                248999999999999999999999999999999999999   6


Q ss_pred             CCCcEEEeecccceeccCCc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhC-CCCCCCCChHHHHHH
Q 048594          154 ENATLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG-AQPFWAESLYGTLTA  229 (483)
Q Consensus       154 ~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g-~~pf~~~~~~~~~~~  229 (483)
                      .++.+||+|||+|+......   ......||+.|+|||++.+..++.++||||+||++|+|++| .+||.+......+..
T Consensus       169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~  248 (299)
T d1ywna1         169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR  248 (299)
T ss_dssp             GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH
T ss_pred             CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            67899999999998654322   22345799999999999988999999999999999999986 567877655444444


Q ss_pred             HHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          230 IMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       230 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      +......+  +..+.+++++.++|.+||+.||.+|||++|+++|
T Consensus       249 ~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         249 RLKEGTRM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HHHHTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCC--CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            33332222  2234689999999999999999999999999986

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-44  Score=342.87  Aligned_cols=218  Identities=20%  Similarity=0.302  Sum_probs=188.7

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------cCeEEEeccC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------EGYLKREHCD   99 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~lv~E~~~   99 (483)
                      ++|++.+.||+|+||+||+|+++ +++.||||++++.....                             ..|+|||||+
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            47889999999999999999986 78899999998754321                             1199999999


Q ss_pred             CCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce--ec
Q 048594          100 GGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV--YE  176 (483)
Q Consensus       100 g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~--~~  176 (483)
                      +|+|.+++.. ...+++..+..++.||++||+|||++||+||||||+||++   +..+.+||+|||++........  ..
T Consensus        83 ~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill---~~~~~~kl~DfG~a~~~~~~~~~~~~  159 (258)
T d1k2pa_          83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSV  159 (258)
T ss_dssp             TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE---CTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred             CCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE---cCCCcEEECcchhheeccCCCceeec
Confidence            9999998764 4679999999999999999999999999999999999999   6778999999999987654322  22


Q ss_pred             ccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHH
Q 048594          177 EVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRR  255 (483)
Q Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  255 (483)
                      ...||+.|+|||++.+..++.++||||+||++|+|+| |+.||.+.+..+....+..+....   .+...++++.+||.+
T Consensus       160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~---~p~~~~~~l~~li~~  236 (258)
T d1k2pa_         160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLASEKVYTIMYS  236 (258)
T ss_dssp             CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHH
T ss_pred             ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCC---CcccccHHHHHHHHH
Confidence            3568999999999998899999999999999999998 899999999888888887654322   235688999999999


Q ss_pred             hCccCCCCCCCHHHHHcC
Q 048594          256 MLIRDPNNQITVAQILKH  273 (483)
Q Consensus       256 ~L~~dP~~R~t~~e~L~h  273 (483)
                      ||+.||++|||++++++|
T Consensus       237 cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         237 CWHEKADERPTFKILLSN  254 (258)
T ss_dssp             TTCSSGGGSCCHHHHHHH
T ss_pred             HccCCHhHCcCHHHHHHH
Confidence            999999999999999986

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.1e-44  Score=346.34  Aligned_cols=230  Identities=17%  Similarity=0.230  Sum_probs=183.9

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC-----------------------------eEEEec
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG-----------------------------YLKREH   97 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------------------~lv~E~   97 (483)
                      +.++|++.+.||+|+||+||+|.++.+|+.||||++.........                             ++||||
T Consensus         5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            457899999999999999999999999999999998775432222                             889999


Q ss_pred             cCCCChHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc---
Q 048594           98 CDGGTLVDRIS-DRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK---  173 (483)
Q Consensus        98 ~~g~~L~~~l~-~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~---  173 (483)
                      |.+ +|...+. ....+++..+..++.||+.||+|||++||+||||||+|||+...+.+..++|+|||+|..+....   
T Consensus        85 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~  163 (299)
T d1ckia_          85 LGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ  163 (299)
T ss_dssp             CCC-BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCC
T ss_pred             cCC-chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecccccccc
Confidence            955 6666554 45689999999999999999999999999999999999999765667789999999998875432   


Q ss_pred             -----eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChHHHHHHH---HccccCCCC-CCCCC
Q 048594          174 -----VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLYGTLTAI---MSREIDFKS-DPWPT  244 (483)
Q Consensus       174 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~~~~~~i---~~~~~~~~~-~~~~~  244 (483)
                           ......||+.|+|||.+.+..++.++|||||||++|+|++|..||...........+   .......+. ...+.
T Consensus       164 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (299)
T d1ckia_         164 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKG  243 (299)
T ss_dssp             BCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTT
T ss_pred             ceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccC
Confidence                 123457999999999999988999999999999999999999999876544333222   111111111 12357


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCHH---HHHcCCcCC
Q 048594          245 ISSSAKDLIRRMLIRDPNNQITVA---QILKHPWLN  277 (483)
Q Consensus       245 ~~~~~~~li~~~L~~dP~~R~t~~---e~L~h~~~~  277 (483)
                      +|+++.+||.+||..+|++||+++   ++|+|+|.+
T Consensus       244 ~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         244 YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             SCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence            899999999999999999999987   456777654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-44  Score=341.14  Aligned_cols=220  Identities=19%  Similarity=0.268  Sum_probs=177.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCC---CEEEEEEeccCCC------------------------------CCcCeEE
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTG---LQFACKSISKTSK------------------------------SDEGYLK   94 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~~avK~~~~~~~------------------------------~~~~~lv   94 (483)
                      .++|.+.+.||+|+||+||+|++..++   ..||||.+.....                              ....|+|
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv   85 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII   85 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEE
Confidence            468999999999999999999987553   5689998865431                              1122999


Q ss_pred             EeccCCCChHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISD-RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~-~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      ||||++|+|.+++.. ..++++..+..++.||+.||.|||+++|+||||||+||++   +..+.+||+|||+|+.+....
T Consensus        86 ~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll---~~~~~~Kl~DfG~a~~~~~~~  162 (273)
T d1mp8a_          86 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDST  162 (273)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECC-----------
T ss_pred             EEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheee---cCCCcEEEccchhheeccCCc
Confidence            999999999998765 4579999999999999999999999999999999999999   456789999999998765332


Q ss_pred             --eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          174 --VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       174 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                        ......||+.|+|||++.+..++.++||||+||++|+|++ |.+||.+.+..+....+..+...   +.++.+|+++.
T Consensus       163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~  239 (273)
T d1mp8a_         163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPNCPPTLY  239 (273)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCTTCCHHHH
T ss_pred             ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHHHH
Confidence              2234568999999999998899999999999999999998 89999998888888888776432   23467899999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      +||.+||..||.+|||+.|+++|
T Consensus       240 ~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         240 SLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999999874

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-43  Score=339.84  Aligned_cols=224  Identities=20%  Similarity=0.281  Sum_probs=183.1

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC----------------------------CcCeEEEeccC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS----------------------------DEGYLKREHCD   99 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------------------------~~~~lv~E~~~   99 (483)
                      .++|++.+.||+|+||+||+|+++.+ ..||||++......                            +..|+|||||.
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~   94 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS   94 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecC
Confidence            36899999999999999999999865 57999999765421                            11299999999


Q ss_pred             CCChHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc--ee
Q 048594          100 GGTLVDRISD--RERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK--VY  175 (483)
Q Consensus       100 g~~L~~~l~~--~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~--~~  175 (483)
                      +|+|..++..  ...+++..+..++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||+++......  ..
T Consensus        95 ~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll---~~~~~~kl~DfGla~~~~~~~~~~~  171 (285)
T d1fmka3          95 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDNEYTAR  171 (285)
T ss_dssp             TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCTTC----------
T ss_pred             CCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEE---CCCCcEEEcccchhhhccCCCceee
Confidence            9999998864  3579999999999999999999999999999999999999   567899999999998764333  22


Q ss_pred             cccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhC-CCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHH
Q 048594          176 EEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG-AQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIR  254 (483)
Q Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (483)
                      ....||+.|+|||++....++.++||||+||++|+|++| .+|+.+....+.+..+..+..   .+..+.+|+++++||.
T Consensus       172 ~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~  248 (285)
T d1fmka3         172 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR---MPCPPECPESLHDLMC  248 (285)
T ss_dssp             ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC---CCCCTTSCHHHHHHHH
T ss_pred             ccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC---CCCCcccCHHHHHHHH
Confidence            335789999999999988999999999999999999995 555566666677777765432   2234578999999999


Q ss_pred             HhCccCCCCCCCHHHHHc--CCcCCC
Q 048594          255 RMLIRDPNNQITVAQILK--HPWLNY  278 (483)
Q Consensus       255 ~~L~~dP~~R~t~~e~L~--h~~~~~  278 (483)
                      +||+.||++|||+++++.  ++||+.
T Consensus       249 ~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         249 QCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            999999999999999988  889973

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-43  Score=342.68  Aligned_cols=219  Identities=18%  Similarity=0.244  Sum_probs=180.1

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCC----EEEEEEeccCCCCCc------------------------------CeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGL----QFACKSISKTSKSDE------------------------------GYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~~avK~~~~~~~~~~------------------------------~~lv   94 (483)
                      .+|++++.||+|+||+||+|.+..+|+    +||+|.+........                              .+++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v   88 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   88 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEE
Confidence            369999999999999999999998876    578888765432111                              1899


Q ss_pred             EeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCc
Q 048594           95 REHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGK  173 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~  173 (483)
                      +|||.+++|.+.+... ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+......
T Consensus        89 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll---~~~~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_          89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             EECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCCSHHHHTTTTC
T ss_pred             EEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhccee---CCCCCeEeeccccceeccccc
Confidence            9999999999988764 679999999999999999999999999999999999999   456789999999998765432


Q ss_pred             e---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHH
Q 048594          174 V---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSA  249 (483)
Q Consensus       174 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (483)
                      .   .....||+.|+|||++.+..++.++|||||||++|+|+| |.+||.+.+..+....+..+...   +..+.+++++
T Consensus       166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~---~~p~~~~~~~  242 (317)
T d1xkka_         166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL---PQPPICTIDV  242 (317)
T ss_dssp             C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCC---CCCTTBCHHH
T ss_pred             ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCcccCHHH
Confidence            2   223468999999999988899999999999999999998 89999888877777776655321   2235789999


Q ss_pred             HHHHHHhCccCCCCCCCHHHHHcC
Q 048594          250 KDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       250 ~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      .+||.+||..||.+|||+.|++.|
T Consensus       243 ~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         243 YMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCChhhCcCHHHHHHH
Confidence            999999999999999999999987

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-42  Score=334.09  Aligned_cols=219  Identities=18%  Similarity=0.289  Sum_probs=174.7

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCC----CEEEEEEeccCCCC-------------------------------CcCe
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTG----LQFACKSISKTSKS-------------------------------DEGY   92 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~~avK~~~~~~~~-------------------------------~~~~   92 (483)
                      .+.|.+.++||+|+||+||+|.++.++    ..||||.+......                               ...|
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            457999999999999999999987665    47999998654321                               1119


Q ss_pred             EEEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccC
Q 048594           93 LKREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEE  171 (483)
Q Consensus        93 lv~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~  171 (483)
                      +|||||.++++.+.+... ..+++..+..++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||+++.+..
T Consensus        86 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~~~  162 (283)
T d1mqba_          86 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLED  162 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC------
T ss_pred             EEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEE---CCCCeEEEcccchhhcccC
Confidence            999999999999988655 679999999999999999999999999999999999999   6778999999999987643


Q ss_pred             Cc----eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhC-CCCCCCCChHHHHHHHHccccCCCCCCCCCCC
Q 048594          172 GK----VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG-AQPFWAESLYGTLTAIMSREIDFKSDPWPTIS  246 (483)
Q Consensus       172 ~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (483)
                      ..    ......||+.|+|||++.+..++.++|||||||++|||++| .+|+.+.+..+.+..+..+..   .+....+|
T Consensus       163 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~  239 (283)
T d1mqba_         163 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR---LPTPMDCP  239 (283)
T ss_dssp             -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC---CCCCTTCB
T ss_pred             CCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCC---CCCchhhH
Confidence            32    12234689999999999988999999999999999999995 555555666666766665432   12234688


Q ss_pred             HHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          247 SSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .++.++|.+||+.||++|||+.|+++
T Consensus       240 ~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         240 SAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            99999999999999999999999876

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-42  Score=337.29  Aligned_cols=219  Identities=21%  Similarity=0.304  Sum_probs=181.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECCCC-------CEEEEEEeccCCCC--------------------------------
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENSTG-------LQFACKSISKTSKS--------------------------------   88 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~~avK~~~~~~~~--------------------------------   88 (483)
                      .++|.+.+.||+|+||.||+|++..++       ..||||++.+....                                
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            478999999999999999999987654       47999999765421                                


Q ss_pred             CcCeEEEeccCCCChHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC
Q 048594           89 DEGYLKREHCDGGTLVDRISDR----------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD  152 (483)
Q Consensus        89 ~~~~lv~E~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~  152 (483)
                      ...|+|||||.+|+|.++|...                ..+++.++..++.||+.||+|||+++|+||||||+|||+   
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl---  168 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---  168 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceee---
Confidence            1129999999999999999754                358999999999999999999999999999999999999   


Q ss_pred             CCCCcEEEeecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHH
Q 048594          153 DENATLKATDFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLT  228 (483)
Q Consensus       153 ~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~  228 (483)
                      +.++.+||+|||++........   .....||+.|+|||.+.+..|+.++|||||||++|+|++ |.+||.+.+......
T Consensus       169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~  248 (299)
T d1fgka_         169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK  248 (299)
T ss_dssp             CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred             cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHH
Confidence            6778999999999987754332   234578999999999988899999999999999999998 799998888877777


Q ss_pred             HHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          229 AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       229 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+..+.. +  +..+.+|+++.+||.+||+.||++|||+.|+++
T Consensus       249 ~i~~~~~-~--~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         249 LLKEGHR-M--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HHHTTCC-C--CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCC-C--CCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            7665432 2  223578999999999999999999999999986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-43  Score=340.14  Aligned_cols=219  Identities=21%  Similarity=0.265  Sum_probs=183.0

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCE--EEEEEeccCCCCCc--------------------------------CeEE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQ--FACKSISKTSKSDE--------------------------------GYLK   94 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~--~avK~~~~~~~~~~--------------------------------~~lv   94 (483)
                      ++|++.+.||+|+||+||+|+++.+|..  ||||.+......+.                                .|+|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            6899999999999999999999988874  67777754321111                                1999


Q ss_pred             EeccCCCChHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcE
Q 048594           95 REHCDGGTLVDRISDR----------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATL  158 (483)
Q Consensus        95 ~E~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~i  158 (483)
                      ||||+||+|.++|...                ..+++..+..++.||+.||.|||+++|+||||||+|||+   +..+.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~---~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEE---cCCCce
Confidence            9999999999999654                579999999999999999999999999999999999999   667799


Q ss_pred             EEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCC-CCCCCCChHHHHHHHHccccCC
Q 048594          159 KATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGA-QPFWAESLYGTLTAIMSREIDF  237 (483)
Q Consensus       159 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~-~pf~~~~~~~~~~~i~~~~~~~  237 (483)
                      ||+|||++.............||+.|+|||.+.+..++.++|||||||++|+|++|. +||.+.+..+....+..+..  
T Consensus       167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~--  244 (309)
T d1fvra_         167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR--  244 (309)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC--
T ss_pred             EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCC--
Confidence            999999998765444444567899999999998888999999999999999999965 67888887887777765422  


Q ss_pred             CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHcC
Q 048594          238 KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       238 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                       .+.+..+++++++||.+||+.||++|||+.|+++|
T Consensus       245 -~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         245 -LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             -CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence             22335789999999999999999999999999986

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-43  Score=333.93  Aligned_cols=219  Identities=18%  Similarity=0.259  Sum_probs=176.3

Q ss_pred             cceEEeeeecccCceeEEEEEECCC-C--CEEEEEEeccCCCCC--------------------------------cCeE
Q 048594           49 LHFTIAEELCRGESGRIYLCTENST-G--LQFACKSISKTSKSD--------------------------------EGYL   93 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~-~--~~~avK~~~~~~~~~--------------------------------~~~l   93 (483)
                      ++|++++.||+|+||.||+|+++.+ +  ..||||++.+.....                                ..|+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~l   87 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   87 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchhe
Confidence            5799999999999999999986533 3  368999987643211                                1299


Q ss_pred             EEeccCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCC
Q 048594           94 KREHCDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEG  172 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~  172 (483)
                      |||||++++|.+++... +++++..+..++.||+.||.|||+++|+||||||+||+++   .++.+||+|||+++.+...
T Consensus        88 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~---~~~~vkl~DfGl~~~~~~~  164 (273)
T d1u46a_          88 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMRALPQN  164 (273)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECCCTTCEECCC-
T ss_pred             eeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccc---cccceeeccchhhhhcccC
Confidence            99999999999877654 5799999999999999999999999999999999999995   4568999999999987543


Q ss_pred             ce----ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCH
Q 048594          173 KV----YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISS  247 (483)
Q Consensus       173 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (483)
                      ..    .....|++.|+|||++.+..++.++|||||||++|||++ |.+||.+.+..+....+.+....++  ..+.+|+
T Consensus       165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~  242 (273)
T d1u46a_         165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP--RPEDCPQ  242 (273)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC--CCTTCCH
T ss_pred             CCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCC--CcccccH
Confidence            22    223457889999999998889999999999999999998 8999999999999888887765443  2357899


Q ss_pred             HHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          248 SAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +++++|.+||..||++|||+.++++
T Consensus       243 ~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         243 DIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9999999999999999999999864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-42  Score=336.93  Aligned_cols=219  Identities=18%  Similarity=0.249  Sum_probs=185.0

Q ss_pred             ccceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCCC-------------------------------CcC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSKS-------------------------------DEG   91 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~-------------------------------~~~   91 (483)
                      +++|++.+.||+|+||+||+|+++     .+++.||||++......                               ...
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~   91 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM   91 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCce
Confidence            467999999999999999999975     35689999998754311                               112


Q ss_pred             eEEEeccCCCChHHHHhcC------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeE
Q 048594           92 YLKREHCDGGTLVDRISDR------------------------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENF  147 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~------------------------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NI  147 (483)
                      ++|+|||.+|+|.+++...                        ..+++..+..++.||+.||+|||+++++||||||+||
T Consensus        92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NI  171 (301)
T d1lufa_          92 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNC  171 (301)
T ss_dssp             EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccce
Confidence            9999999999999999653                        2489999999999999999999999999999999999


Q ss_pred             EEeeCCCCCcEEEeecccceeccCCc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCC-CCCCCCCh
Q 048594          148 IFTTDDENATLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGA-QPFWAESL  223 (483)
Q Consensus       148 ll~~~~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~-~pf~~~~~  223 (483)
                      |+   +.++.+||+|||+++......   ......|++.|+|||.+.+..++.++|||||||++|||++|. +||.+.+.
T Consensus       172 Ll---d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~  248 (301)
T d1lufa_         172 LV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH  248 (301)
T ss_dssp             EE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred             EE---CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCH
Confidence            99   667899999999998664332   223457889999999999989999999999999999999985 68988888


Q ss_pred             HHHHHHHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          224 YGTLTAIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       224 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+....+..+...   +.+..+|+++.+||.+||+.+|++|||+.|+++
T Consensus       249 ~e~~~~v~~~~~~---~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         249 EEVIYYVRDGNIL---ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             HHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCC---CCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            8888888876532   223478999999999999999999999999965

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-42  Score=330.40  Aligned_cols=214  Identities=21%  Similarity=0.305  Sum_probs=178.0

Q ss_pred             cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------CcCeEEEeccC
Q 048594           49 LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------DEGYLKREHCD   99 (483)
Q Consensus        49 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~lv~E~~~   99 (483)
                      ++|++.+.||+|+||.||+|.++  |..||||+++.....                             ...|+|||||+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~   84 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   84 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred             HHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccC
Confidence            57999999999999999999985  789999999765311                             11289999999


Q ss_pred             CCChHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCceecc
Q 048594          100 GGTLVDRISDR--ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKVYEE  177 (483)
Q Consensus       100 g~~L~~~l~~~--~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~~~~  177 (483)
                      +|+|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+++.....  ...
T Consensus        85 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~s~~~~~~--~~~  159 (262)
T d1byga_          85 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASST--QDT  159 (262)
T ss_dssp             TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC------------
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee---cCCCCEeecccccceecCCC--Ccc
Confidence            99999999654  358999999999999999999999999999999999999   67889999999999876433  344


Q ss_pred             cccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHHHHHccccCCCCCCCCCCCHHHHHHHHHh
Q 048594          178 VVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLTAIMSREIDFKSDPWPTISSSAKDLIRRM  256 (483)
Q Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  256 (483)
                      ..+++.|+|||++.+..++.++|||||||++|||++ |.+||......+....+.++...   +..+.+++++++||.+|
T Consensus       160 ~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~li~~c  236 (262)
T d1byga_         160 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM---DAPDGCPPAVYEVMKNC  236 (262)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCC---CCCTTCCHHHHHHHHHH
T ss_pred             ccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCccCCHHHHHHHHHH
Confidence            578999999999988899999999999999999998 79999888888888888764322   12346889999999999


Q ss_pred             CccCCCCCCCHHHHHc
Q 048594          257 LIRDPNNQITVAQILK  272 (483)
Q Consensus       257 L~~dP~~R~t~~e~L~  272 (483)
                      |..||.+|||+.++++
T Consensus       237 l~~dP~~Rps~~~l~~  252 (262)
T d1byga_         237 WHLDAAMRPSFLQLRE  252 (262)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             cccCHhHCcCHHHHHH
Confidence            9999999999999976

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1e-41  Score=329.35  Aligned_cols=225  Identities=16%  Similarity=0.229  Sum_probs=182.6

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCCcC-----------------------------eEEEec
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSDEG-----------------------------YLKREH   97 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------------------~lv~E~   97 (483)
                      +.++|++.+.||+|+||+||+|+++.+|+.||||++.........                             |+||||
T Consensus         3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            567899999999999999999999999999999998765432211                             999999


Q ss_pred             cCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCC--CCCcEEEeecccceeccCCc-
Q 048594           98 CDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDD--ENATLKATDFGLAFFFEEGK-  173 (483)
Q Consensus        98 ~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~--~~~~ikl~Dfg~a~~~~~~~-  173 (483)
                      | |++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+....  ..+.+||+|||+|+...... 
T Consensus        83 ~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (293)
T d1csna_          83 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT  161 (293)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred             c-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCcc
Confidence            9 67999998765 4799999999999999999999999999999999999996432  35689999999998764321 


Q ss_pred             -------eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCCh---HHHHHHHHccccCCC-CCCC
Q 048594          174 -------VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESL---YGTLTAIMSREIDFK-SDPW  242 (483)
Q Consensus       174 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~---~~~~~~i~~~~~~~~-~~~~  242 (483)
                             .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+...   ......+.......+ ....
T Consensus       162 ~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~  241 (293)
T d1csna_         162 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELC  241 (293)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHT
T ss_pred             ccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhc
Confidence                   12345799999999999998899999999999999999999999976443   233333332222111 1123


Q ss_pred             CCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          243 PTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       243 ~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      +.+|+++.+++..|+..+|++||+++.+.+
T Consensus       242 ~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         242 AGFPEEFYKYMHYARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             TTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            568899999999999999999999876543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-41  Score=330.74  Aligned_cols=220  Identities=22%  Similarity=0.330  Sum_probs=183.9

Q ss_pred             ccceEEeeeecccCceeEEEEEEC-----CCCCEEEEEEeccCCCC--------------------------------Cc
Q 048594           48 KLHFTIAEELCRGESGRIYLCTEN-----STGLQFACKSISKTSKS--------------------------------DE   90 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~--------------------------------~~   90 (483)
                      .++|.+.+.||+|+||.||+|+++     .+++.||||++.+....                                ..
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            479999999999999999999863     46779999999764311                                11


Q ss_pred             CeEEEeccCCCChHHHHhcCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeC
Q 048594           91 GYLKREHCDGGTLVDRISDRE------------------RYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTD  152 (483)
Q Consensus        91 ~~lv~E~~~g~~L~~~l~~~~------------------~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~  152 (483)
                      .|+|||||++|+|.+++....                  .+++..+..++.||+.||+|||+++++||||||+||++   
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~---  178 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---  178 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccc---
Confidence            299999999999999997543                  58999999999999999999999999999999999999   


Q ss_pred             CCCCcEEEeecccceeccCCc---eecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhh-CCCCCCCCChHHHHH
Q 048594          153 DENATLKATDFGLAFFFEEGK---VYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLS-GAQPFWAESLYGTLT  228 (483)
Q Consensus       153 ~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~pf~~~~~~~~~~  228 (483)
                      +..+.+|++|||.++......   .....+||+.|+|||++....++.++|||||||++|+|++ |.+||.+.+....+.
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~  258 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY  258 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred             cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            567899999999998765432   2233578999999999988889999999999999999998 667776766666666


Q ss_pred             HHHccccCCCCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          229 AIMSREIDFKSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       229 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                      .+.........  ....|+++.+||.+||+.||.+|||++++++
T Consensus       259 ~~i~~~~~~~~--~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         259 KMIKEGFRMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhcCCCCCC--cccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            66554443322  2468899999999999999999999999986

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-41  Score=327.15  Aligned_cols=219  Identities=20%  Similarity=0.263  Sum_probs=186.3

Q ss_pred             ccceEEeeeecccCceeEEEEEECC-----CCCEEEEEEeccCCCC-------------------------------CcC
Q 048594           48 KLHFTIAEELCRGESGRIYLCTENS-----TGLQFACKSISKTSKS-------------------------------DEG   91 (483)
Q Consensus        48 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~~-------------------------------~~~   91 (483)
                      .++|.+.+.||+|+||+||+|.++.     ++..||||++......                               ...
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~   98 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   98 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence            4799999999999999999998863     3578999999764311                               112


Q ss_pred             eEEEeccCCCChHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEe
Q 048594           92 YLKREHCDGGTLVDRISDR----------ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKAT  161 (483)
Q Consensus        92 ~lv~E~~~g~~L~~~l~~~----------~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~  161 (483)
                      ++|||||.+|+|.+++...          ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+
T Consensus        99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl---d~~~~~Kl~  175 (308)
T d1p4oa_          99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIG  175 (308)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE---CTTCCEEEC
T ss_pred             eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee---cCCceEEEe
Confidence            9999999999999988642          357899999999999999999999999999999999999   678899999


Q ss_pred             ecccceeccCCce---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhC-CCCCCCCChHHHHHHHHccccCC
Q 048594          162 DFGLAFFFEEGKV---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSG-AQPFWAESLYGTLTAIMSREIDF  237 (483)
Q Consensus       162 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~  237 (483)
                      |||+++.+.....   .....||+.|+|||.+.+..++.++||||+|+++|+|++| .+||.+.+..+.+..+.++... 
T Consensus       176 DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~-  254 (308)
T d1p4oa_         176 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL-  254 (308)
T ss_dssp             CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCC-
T ss_pred             ecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCC-
Confidence            9999987643322   2334689999999999988899999999999999999998 5888888888888888775532 


Q ss_pred             CCCCCCCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          238 KSDPWPTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       238 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                        +..+.+|+.+.++|.+||+.+|++|||+.++++
T Consensus       255 --~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~  287 (308)
T d1p4oa_         255 --DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  287 (308)
T ss_dssp             --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --CCcccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence              123578899999999999999999999999997

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-40  Score=319.28  Aligned_cols=215  Identities=19%  Similarity=0.269  Sum_probs=172.7

Q ss_pred             EeeeecccCceeEEEEEECCCC---CEEEEEEeccCCCC--------------------------------CcCeEEEec
Q 048594           53 IAEELCRGESGRIYLCTENSTG---LQFACKSISKTSKS--------------------------------DEGYLKREH   97 (483)
Q Consensus        53 ~~~~lg~G~~g~V~~~~~~~~~---~~~avK~~~~~~~~--------------------------------~~~~lv~E~   97 (483)
                      +.++||+|+||+||+|.+..++   ..||||.+......                                ...++||||
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~  110 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY  110 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence            3678999999999999987653   36899998753211                                111899999


Q ss_pred             cCCCChHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccceeccCCce--
Q 048594           98 CDGGTLVDRISDR-ERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLAFFFEEGKV--  174 (483)
Q Consensus        98 ~~g~~L~~~l~~~-~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~~~~~~~--  174 (483)
                      |++++|.+++... ..+++..+..++.||+.||.|||+.+|+||||||+|||+   +.++.+||+|||+++.+.....  
T Consensus       111 ~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl---~~~~~~kL~DFG~~~~~~~~~~~~  187 (311)
T d1r0pa_         111 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDS  187 (311)
T ss_dssp             CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSSGGGCCTTTTTCCC
T ss_pred             eecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE---CCCCCEEEecccchhhcccccccc
Confidence            9999999988755 467888999999999999999999999999999999999   6778999999999987653322  


Q ss_pred             ---ecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCC-ChHHHHHHHHccccCCCCCCCCCCCHHHH
Q 048594          175 ---YEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAE-SLYGTLTAIMSREIDFKSDPWPTISSSAK  250 (483)
Q Consensus       175 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (483)
                         .....||+.|+|||.+....++.++||||||+++|||++|..||... +..+....+..+....   ..+.+++++.
T Consensus       188 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~---~p~~~~~~l~  264 (311)
T d1r0pa_         188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL---QPEYCPDPLY  264 (311)
T ss_dssp             TTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCC---CCTTCCHHHH
T ss_pred             ceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC---CcccCcHHHH
Confidence               12346899999999998889999999999999999999977777654 3334455555543221   2246789999


Q ss_pred             HHHHHhCccCCCCCCCHHHHHcC
Q 048594          251 DLIRRMLIRDPNNQITVAQILKH  273 (483)
Q Consensus       251 ~li~~~L~~dP~~R~t~~e~L~h  273 (483)
                      +||.+||+.||.+|||+.|+++|
T Consensus       265 ~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         265 EVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999999987

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-40  Score=320.18  Aligned_cols=220  Identities=22%  Similarity=0.301  Sum_probs=170.6

Q ss_pred             cccceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC---------------------------------cCeE
Q 048594           47 IKLHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD---------------------------------EGYL   93 (483)
Q Consensus        47 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~l   93 (483)
                      |..+|.+.+.||+|+||.||+|++  +|+.||||++.......                                 ..|+
T Consensus         1 ~~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           1 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             CCcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            457899999999999999999986  58999999986543110                                 1189


Q ss_pred             EEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCeeeCCCCCeEEEeeCCCCCcEEEeeccc
Q 048594           94 KREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHS--------NGIMHRDLKPENFIFTTDDENATLKATDFGL  165 (483)
Q Consensus        94 v~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~--------~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~  165 (483)
                      |||||++|+|.+++.+. ++++..+..++.|++.||.|||+        +||+||||||+|||+   +.++.+||+|||+
T Consensus        79 v~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl---~~~~~~Kl~DFGl  154 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGL  154 (303)
T ss_dssp             EEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE---CTTSCEEECCCTT
T ss_pred             EEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE---cCCCCeEEEecCc
Confidence            99999999999999875 69999999999999999999996        599999999999999   6778999999999


Q ss_pred             ceeccCCc-----eecccccCCcccCccccCCCC------CCCcCchHHHHHHHHHHhhCCCCCCCCC------------
Q 048594          166 AFFFEEGK-----VYEEVVGTPLYMAPELLGPCK------YGKEIDIWSAGLILYNLLSGAQPFWAES------------  222 (483)
Q Consensus       166 a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwslGvil~~ll~g~~pf~~~~------------  222 (483)
                      +.......     ......||+.|+|||++.+..      ++.++|||||||++|+|++|.+||....            
T Consensus       155 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~  234 (303)
T d1vjya_         155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS  234 (303)
T ss_dssp             CEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred             cccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccc
Confidence            98775432     223467999999999987642      4668999999999999999988773211            


Q ss_pred             ---hHHHHHHHHccccCCCCCC-C--CCCCHHHHHHHHHhCccCCCCCCCHHHHHc
Q 048594          223 ---LYGTLTAIMSREIDFKSDP-W--PTISSSAKDLIRRMLIRDPNNQITVAQILK  272 (483)
Q Consensus       223 ---~~~~~~~i~~~~~~~~~~~-~--~~~~~~~~~li~~~L~~dP~~R~t~~e~L~  272 (483)
                         .......+.........+. +  ...+..+.+++.+||+.||.+|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             cchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence               1222223322222111110 0  112345889999999999999999999876

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.7e-40  Score=325.81  Aligned_cols=231  Identities=21%  Similarity=0.354  Sum_probs=172.9

Q ss_pred             cccc-cceEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCC-----------------------------------
Q 048594           45 EDIK-LHFTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKS-----------------------------------   88 (483)
Q Consensus        45 ~~i~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------------   88 (483)
                      +.|. .+|+++++||+|+||+||+|+++.+|+.||||++.+....                                   
T Consensus         8 ~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~   87 (362)
T d1q8ya_           8 EPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   87 (362)
T ss_dssp             CEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             CCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEE
Confidence            3454 4699999999999999999999999999999999764210                                   


Q ss_pred             -------CcCeEEEeccCCCChHHH---HhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeeCCCCCeEEEeeCCCC--
Q 048594           89 -------DEGYLKREHCDGGTLVDR---ISDRERYTERAAASVFRSVVNALHACHS-NGIMHRDLKPENFIFTTDDEN--  155 (483)
Q Consensus        89 -------~~~~lv~E~~~g~~L~~~---l~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ivH~dlkp~NIll~~~~~~--  155 (483)
                             ...+++++++..+.....   ......+++..+..++.||+.||+|||+ .||+||||||+|||+..++..  
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~  167 (362)
T d1q8ya_          88 HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPEN  167 (362)
T ss_dssp             EEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTT
T ss_pred             EeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccc
Confidence                   000456666655443222   2234679999999999999999999998 899999999999999653322  


Q ss_pred             -CcEEEeecccceeccCCceecccccCCcccCccccCCCCCCCcCchHHHHHHHHHHhhCCCCCCCCChH------HHHH
Q 048594          156 -ATLKATDFGLAFFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGLILYNLLSGAQPFWAESLY------GTLT  228 (483)
Q Consensus       156 -~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~pf~~~~~~------~~~~  228 (483)
                       ..++++|||.+.....  .....+||+.|+|||++....++.++|+||+||++++|++|+.||.+....      ..+.
T Consensus       168 ~~~~kl~dfg~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~  245 (362)
T d1q8ya_         168 LIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA  245 (362)
T ss_dssp             EEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             cceeeEeeccccccccc--ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHH
Confidence             3599999999987543  234568999999999999889999999999999999999999999754321      1111


Q ss_pred             HHHc--cc---------------------c-CCC--------------CCCCCCCCHHHHHHHHHhCccCCCCCCCHHHH
Q 048594          229 AIMS--RE---------------------I-DFK--------------SDPWPTISSSAKDLIRRMLIRDPNNQITVAQI  270 (483)
Q Consensus       229 ~i~~--~~---------------------~-~~~--------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  270 (483)
                      ....  +.                     . ...              .......++++.+||.+||.+||.+|||++|+
T Consensus       246 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~  325 (362)
T d1q8ya_         246 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL  325 (362)
T ss_dssp             HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             HHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            1100  00                     0 000              00012346789999999999999999999999


Q ss_pred             HcCCcCC
Q 048594          271 LKHPWLN  277 (483)
Q Consensus       271 L~h~~~~  277 (483)
                      |+||||+
T Consensus       326 L~Hp~f~  332 (362)
T d1q8ya_         326 VNHPWLK  332 (362)
T ss_dssp             HTCGGGT
T ss_pred             hcCcccC
Confidence            9999998

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.84  E-value=4.1e-21  Score=166.26  Aligned_cols=137  Identities=27%  Similarity=0.410  Sum_probs=120.6

Q ss_pred             hhhccchHHHhhHHHHHhhcCCCC-CCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceee-------------
Q 048594          313 IVENLPAEEIQKHKETFKQMDTND-SGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLN-------------  378 (483)
Q Consensus       313 i~~~~~~~~~~~l~~~F~~~D~d~-~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~-------------  378 (483)
                      .+..++++++++++++|+.+|.|+ +|.|+.+||..+|+.+|..+++.++..++..++.+++|.+..             
T Consensus         4 ~~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (156)
T d1dtla_           4 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD   83 (156)
T ss_dssp             GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred             HHHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhcccc
Confidence            356789999999999999999996 899999999999999999999999999999999999987211             


Q ss_pred             chhhhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          379 LSLVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       379 ~~~~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .......+.++.+|+.||.++        +|+|+.+|+++++..+|.. ++++++.++..+|.|+||.|+|+||+++|++
T Consensus        84 ~~~~~~~~~l~~~F~~~D~d~--------~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g  155 (156)
T d1dtla_          84 DSKGKSEEELSDLFRMFDKNA--------DGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG  155 (156)
T ss_dssp             ----CHHHHHHHHHHHHCTTC--------SSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred             cccccHHHHHHHHHHHhCcCC--------CCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcC
Confidence            112234677899999999999        9999999999999999998 9999999999999999999999999999964

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=3.8e-21  Score=164.51  Aligned_cols=133  Identities=27%  Similarity=0.458  Sum_probs=120.3

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeec----------hhhhc
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNL----------SLVQC  384 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~----------~~~~~  384 (483)
                      +.++++++.+++++|+.+|+|++|+|+.+||..++...|..+++.++..++...+.++.+.....          .....
T Consensus         2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (146)
T d1lkja_           2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS   81 (146)
T ss_dssp             CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCH
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccH
Confidence            46789999999999999999999999999999999999999999999999999999988862211          11223


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      .+.++.+|+.||+++        +|+|+.+||+++|..+|.. +++++++++..+| |+||+|+|+||+++|.
T Consensus        82 ~~~~~~aF~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~  145 (146)
T d1lkja_          82 EQELLEAFKVFDKNG--------DGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLS  145 (146)
T ss_dssp             HHHHHHHHHHHCSSS--------SCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHHhC
Confidence            578999999999999        9999999999999999999 9999999999999 9999999999999985

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.84  E-value=5e-22  Score=178.12  Aligned_cols=142  Identities=18%  Similarity=0.119  Sum_probs=100.9

Q ss_pred             eEEeeeecccCceeEEEEEECCCCCEEEEEEeccCCCCC-----------------------------------------
Q 048594           51 FTIAEELCRGESGRIYLCTENSTGLQFACKSISKTSKSD-----------------------------------------   89 (483)
Q Consensus        51 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------------------   89 (483)
                      |.+.+.||+|+||+||+|.+. +|+.||||+++......                                         
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~   80 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY   80 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence            568899999999999999985 78999999876432110                                         


Q ss_pred             ---cCeEEEeccCCCChHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCeEEEeeCCCCCcEEEeecccc
Q 048594           90 ---EGYLKREHCDGGTLVDRISDRERYTERAAASVFRSVVNALHACHSNGIMHRDLKPENFIFTTDDENATLKATDFGLA  166 (483)
Q Consensus        90 ---~~~lv~E~~~g~~L~~~l~~~~~l~~~~~~~i~~qil~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a  166 (483)
                         ..+++|||+.+..+.+       +++..+..++.||+.+|.|||++||+||||||+|||++   + ..++|+|||.|
T Consensus        81 ~~~~~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~---~-~~~~liDFG~a  149 (191)
T d1zara2          81 AWEGNAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS---E-EGIWIIDFPQS  149 (191)
T ss_dssp             EEETTEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE---T-TEEEECCCTTC
T ss_pred             EecCCEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee---C-CCEEEEECCCc
Confidence               0079999999865533       45566778999999999999999999999999999994   2 35999999999


Q ss_pred             eeccCCceecccccCCcccCccccCCCCCCCcCchHHHHH
Q 048594          167 FFFEEGKVYEEVVGTPLYMAPELLGPCKYGKEIDIWSAGL  206 (483)
Q Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGv  206 (483)
                      .....+....-...... .-.+.+ ...|+.++|+||+.-
T Consensus       150 ~~~~~~~~~~~l~rd~~-~~~~~f-~r~y~~~~d~~s~~~  187 (191)
T d1zara2         150 VEVGEEGWREILERDVR-NIITYF-SRTYRTEKDINSAID  187 (191)
T ss_dssp             EETTSTTHHHHHHHHHH-HHHHHH-HHHHCCCCCHHHHHH
T ss_pred             ccCCCCCcHHHHHHHHH-HHHHHH-cCCCCCcccHHHHHH
Confidence            87653321100000000 001112 236788999999743

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.83  E-value=1.8e-20  Score=160.16  Aligned_cols=133  Identities=30%  Similarity=0.508  Sum_probs=121.6

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------hch
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------QCK  385 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~~~  385 (483)
                      +++++++..++++|+.+|+|++|+|+.+||..++...+..++...+..++..+|.+++|.+....+.          ...
T Consensus         2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~   81 (146)
T d1exra_           2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE   81 (146)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChH
Confidence            5788999999999999999999999999999999999999999999999999999999984333222          235


Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      +.++.+|+.+|.++        +|+|+.+||+.++..+|.. +++++.+++..+|.|+||.|+|+||+++|.
T Consensus        82 ~~~~~~F~~~D~d~--------~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~  145 (146)
T d1exra_          82 EELIEAFKVFDRDG--------NGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV  145 (146)
T ss_dssp             HHHHHHHHHHSTTC--------SSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCC--------CCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence            67889999999999        9999999999999999988 999999999999999999999999999985

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.83  E-value=1.2e-20  Score=160.50  Aligned_cols=129  Identities=19%  Similarity=0.347  Sum_probs=113.1

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeec----------hhhhchh
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNL----------SLVQCKD  386 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~----------~~~~~~~  386 (483)
                      ++++++.+++++|..+|.|++|.|+.+||..+|+.+|.++++.++..++..    .+|.+...          ......+
T Consensus         1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~~----~~~~i~~~eF~~~~~~~~~~~~~~~   76 (142)
T d1wdcb_           1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSIFSDKLSGTDSEE   76 (142)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHTT----SSSCCCHHHHHHHHHHHTCSCCCHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHHh----ccCccccccccccccccccccchhh
Confidence            468899999999999999999999999999999999999999999999864    34442111          1122367


Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      .+..+|+.||+++        +|+|+.+||+++|..+|.. +++++.+++..+|.| +|.|+|+||+++|+.+
T Consensus        77 ~l~~aF~~~D~d~--------~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~~  140 (142)
T d1wdcb_          77 TIRNAFAMFDEQE--------TKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS  140 (142)
T ss_dssp             HHHHHHHTTCTTC--------CSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred             hHHHhhhhhcccC--------CCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhcC
Confidence            8999999999999        9999999999999999988 999999999999998 6999999999999765

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.82  E-value=2.5e-20  Score=162.24  Aligned_cols=135  Identities=24%  Similarity=0.427  Sum_probs=121.3

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh-------------
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL-------------  381 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~-------------  381 (483)
                      ..++++++.+++++|..+|+|++|+||.+||..+++.++..+++.++..++..+|.+++|.......             
T Consensus        12 ~~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~   91 (162)
T d1topa_          12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAK   91 (162)
T ss_dssp             HHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcc
Confidence            3478899999999999999999999999999999999999999999999999999999997322221             


Q ss_pred             hhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          382 VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       382 ~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ....+.++.+|+.||.++        +|+|+.+||+++|...|.. ++++++.++..+|.|+||.|+|+||+++|.+
T Consensus        92 ~~~~~~~~~aF~~~D~d~--------~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~  160 (162)
T d1topa_          92 GKSEEELANCFRIFDKNA--------DGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG  160 (162)
T ss_dssp             HHHHHHHHHHHHHHCTTC--------SSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred             cCcHHHHHHHHHHHCCCC--------CCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence            123456788999999999        9999999999999999988 8999999999999999999999999999865

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.82  E-value=7.6e-21  Score=168.88  Aligned_cols=152  Identities=39%  Similarity=0.627  Sum_probs=133.7

Q ss_pred             hhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeech---------hhhc
Q 048594          314 VENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLS---------LVQC  384 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~---------~~~~  384 (483)
                      |..++++++..++++|+.+|.|++|+|+.+||..+++.++..++..+++.++..+|.+++|.+....         ....
T Consensus         1 ~~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   80 (182)
T d1s6ia_           1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER   80 (182)
T ss_dssp             CCSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhccccc
Confidence            3567888999999999999999999999999999999999999999999999999999999832222         2223


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCCCCcc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGT  464 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~  464 (483)
                      .+.++.+|+.+|.++        +|+|+..+|+++++.+|. ++++++.+|..+|.|+||+|||+||+++|+....+...
T Consensus        81 ~e~l~~aF~~~D~d~--------~G~i~~~el~~~l~~~gl-~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~~~~~~~  151 (182)
T d1s6ia_          81 EENLVSAFSYFDKDG--------SGYITLDEIQQACKDFGL-DDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGI  151 (182)
T ss_dssp             CCSTHHHHHHTTTTC--------SSEEEHHHHHHTTTTTTC-CTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCCSSTTC
T ss_pred             HHHHHHHHHHHhhcC--------CCccchhhhhhhhhhcCc-cHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhCcCCCCc
Confidence            567899999999999        999999999999999987 68899999999999999999999999999988877777


Q ss_pred             ccccccchhc
Q 048594          465 SYRNLSHIFI  474 (483)
Q Consensus       465 ~~~~~~~~~~  474 (483)
                      +.+.++..+.
T Consensus       152 ~~~~~~~~~~  161 (182)
T d1s6ia_         152 GRRTMRKTLN  161 (182)
T ss_dssp             CSCTTSSSCC
T ss_pred             hHHHHHHhcc
Confidence            7777766544

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.2e-19  Score=153.85  Aligned_cols=130  Identities=28%  Similarity=0.450  Sum_probs=117.9

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------hchhH
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------QCKDT  387 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------~~~~~  387 (483)
                      ++++..+++++|..+|+|++|+|+.+||..+++..|..++...+..++..+|.+++|.+....+.          ...+.
T Consensus         1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~   80 (141)
T d2obha1           1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE   80 (141)
T ss_dssp             CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHH
Confidence            45778899999999999999999999999999999999999999999999999999983332211          23566


Q ss_pred             HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          388 SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       388 ~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      +..+|..+|.++        +|+|+.++|..++..+|.. +++++..+|+.+|.|+||.|+|+||+++|
T Consensus        81 l~~~f~~~d~~~--------~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m  141 (141)
T d2obha1          81 ILKAFKLFDDDE--------TGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM  141 (141)
T ss_dssp             HHHHHHHHCTTC--------SSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHhcccC--------CCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence            899999999999        9999999999999999998 99999999999999999999999999987

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.80  E-value=7.4e-20  Score=157.48  Aligned_cols=135  Identities=19%  Similarity=0.278  Sum_probs=115.5

Q ss_pred             cchHHHhhHHHHHhhcCC--CCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh-----------h
Q 048594          317 LPAEEIQKHKETFKQMDT--NDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV-----------Q  383 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~--d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~-----------~  383 (483)
                      ++++++.+++++|..||.  |++|+|+.+||..+|+.+|.+++++++..+. ..+.+++|.+....++           .
T Consensus         1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~~   79 (152)
T d1wdcc_           1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQG   79 (152)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCCC
T ss_pred             CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhh-hhhccccccccccccccccccccccchh
Confidence            467889999999999995  8999999999999999999999999998764 4567777763222221           2


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCC--CCCcccHHHHHHHHHcCCC
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRD--KDGRISYEEFCATMKTGTH  460 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~  460 (483)
                      ..+.+..+|+.||.++        +|+|+.+||+++|..+|.+ ++++++++++.+|.+  ++|.|+|+||++.|..+++
T Consensus        80 ~~~~l~~aF~~~D~~~--------~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~~p~  151 (152)
T d1wdcc_          80 TFADYMEAFKTFDREG--------QGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPY  151 (152)
T ss_dssp             CHHHHHHHHHTTCSSS--------SSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHCSC
T ss_pred             HHHhhhhhhhcccccc--------CccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhcCCC
Confidence            3567899999999999        9999999999999999999 999999999999865  5689999999999988764

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.79  E-value=1.9e-19  Score=153.62  Aligned_cols=126  Identities=16%  Similarity=0.249  Sum_probs=108.7

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCC--CCceeech------------hhhchhH
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDG--NGTTLNLS------------LVQCKDT  387 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~--~g~~~~~~------------~~~~~~~  387 (483)
                      .++++++|+.+|.|++|+|+.+||..+|+.+|.+++..++..++..++.+.  +|.+....            .....+.
T Consensus         3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~   82 (145)
T d2mysc_           3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFED   82 (145)
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHHH
Confidence            357899999999999999999999999999999999999999999887764  44421111            1123566


Q ss_pred             HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          388 SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       388 ~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      +..+|+.||+++        +|+|+.+||+++|..+|.+ ++++++.+++. +.|+||.|+|+||+++|.
T Consensus        83 l~~aF~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dG~I~y~eF~~~ll  143 (145)
T d2mysc_          83 FVEGLRVFDKEG--------NGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIM  143 (145)
T ss_pred             HHHHHHHhhcCC--------CCEEcHHHHHHHHHHhCCCCCHHHHHHHHhh-cCCCCCeEEHHHHHHHHh
Confidence            899999999999        9999999999999999988 99999999974 789999999999999874

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.78  E-value=4.6e-19  Score=151.17  Aligned_cols=131  Identities=18%  Similarity=0.306  Sum_probs=109.4

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHH-HHHHHHHhccCCCCCceeec----------hhhhch
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEV-DVKQYMQAADIDGNGTTLNL----------SLVQCK  385 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~-~~~~l~~~~d~~~~g~~~~~----------~~~~~~  385 (483)
                      |+++++.+++++|..+|.+++|+|+.+||..+|+.+|..++.. .++.++    .+.+|.+...          ......
T Consensus         1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~~~~~~----~~~~g~i~~~eF~~~~~~~~~~~~~~   76 (145)
T d2mysb_           1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMI----KEASGPINFTVFLTMFGEKLKGADPE   76 (145)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHHHHHHH----HhccCceeechhhhhhhhcccccchH
Confidence            4678899999999999999999999999999999999765544 344333    3455542111          122235


Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      +.+..+|+.||+++        +|+|+.++|+++|+.+|.+ +++++.+++..+|.|++|.|+|.||+++|..+.
T Consensus        77 ~~l~~aF~~fD~~~--------~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~~~  143 (145)
T d2mysb_          77 DVIMGAFKVLDPDG--------KGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHGE  143 (145)
T ss_pred             HHHHHHHHhhhhcc--------cchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhccCC
Confidence            67999999999999        9999999999999999999 999999999999999999999999999997764

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.78  E-value=2.1e-19  Score=152.29  Aligned_cols=122  Identities=16%  Similarity=0.251  Sum_probs=105.5

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh------------hhchhHHHH
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL------------VQCKDTSLK  390 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~------------~~~~~~~~~  390 (483)
                      ..++++|..+|.|++|+|+.+||..+|+.+|.+++++++..+    +.+.+|.+....+            ....+.+.+
T Consensus         5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~   80 (140)
T d1ggwa_           5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK   80 (140)
T ss_dssp             TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhhHHHHHHH
Confidence            578999999999999999999999999999999999887765    4556666222111            122466999


Q ss_pred             HHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          391 DFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       391 ~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +|+.||+++        +|+|+.+||+++|..+|.+ ++++++++++.+|.+ ||.|+|+||+++|..
T Consensus        81 aF~~~D~d~--------~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~s  139 (140)
T d1ggwa_          81 GFQVFDKDA--------TGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA  139 (140)
T ss_dssp             HHHTTCSSC--------SSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHHC
T ss_pred             HHHHHhccC--------CCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHhc
Confidence            999999999        9999999999999999988 999999999999988 999999999999864

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.76  E-value=2e-18  Score=153.02  Aligned_cols=129  Identities=18%  Similarity=0.283  Sum_probs=116.4

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh---hchhHHHHHHhhcCC
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV---QCKDTSLKDFNIFTK  397 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~---~~~~~~~~~F~~~d~  397 (483)
                      +.++++++|+.+|.|++|+|+.+||..+|+.+|..++..+++.++..+|.+++|.+....+.   .....+..+|+.+|.
T Consensus        16 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~F~~~D~   95 (182)
T d1y1xa_          16 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFILSMREGFRKRDS   95 (182)
T ss_dssp             TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             cHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhccccccccccccccccccccccccccccchhcccc
Confidence            34589999999999999999999999999999999999999999999999999985443332   235668889999999


Q ss_pred             CCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          398 PSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       398 ~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ++        +|+|+.+||+++|..+|.. ++++++.+++.+|.|+||.|+|+||+.++..
T Consensus        96 ~~--------~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~  148 (182)
T d1y1xa_          96 SG--------DGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF  148 (182)
T ss_dssp             TS--------SSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             cc--------chhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHHH
Confidence            99        9999999999999999988 9999999999999999999999999998743

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=4e-19  Score=151.75  Aligned_cols=125  Identities=20%  Similarity=0.320  Sum_probs=105.2

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhcc-CCCCCceeech---------------hhhchhH
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAAD-IDGNGTTLNLS---------------LVQCKDT  387 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d-~~~~g~~~~~~---------------~~~~~~~  387 (483)
                      .++++|..+|.|++|+|+.+||..+|+.+|..++.++++.++...+ .+.+|.+....               .....+.
T Consensus         3 ~~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~   82 (146)
T d1m45a_           3 ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTED   82 (146)
T ss_dssp             CCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHH
T ss_pred             HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHH
Confidence            3578999999999999999999999999999999999999997554 44445421111               1122466


Q ss_pred             HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          388 SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       388 ~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      +..+|+.||.++        +|+|+.+||+.+|+.+|.. +++++..++..+|.|+||.|+|+||+..|.
T Consensus        83 l~~~F~~~D~~~--------~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~  144 (146)
T d1m45a_          83 FVKAFQVFDKES--------TGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  144 (146)
T ss_dssp             HHHHHHTTCSSS--------SSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             HHHHHHhhcccc--------ccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence            899999999999        9999999999999999988 999999999999999999999999998764

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.74  E-value=4.6e-18  Score=142.52  Aligned_cols=120  Identities=25%  Similarity=0.344  Sum_probs=105.9

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh------------hhchhHHHHHH
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL------------VQCKDTSLKDF  392 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~------------~~~~~~~~~~F  392 (483)
                      .+.+|+.+|.|++|.||..||..++..++..+++++++.+|..+|.+++|.+....+            ......++.+|
T Consensus         2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F   81 (134)
T d1jfja_           2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY   81 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccc
Confidence            367999999999999999999999999999999999999999999999998322221            12345678999


Q ss_pred             hhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          393 NIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       393 ~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      +.+|.++        +|+|+.+|++++++.++.   +.+.++|..+|.|+||.|||+||+++|
T Consensus        82 ~~~D~~~--------~g~i~~~el~~~~~~~~~---~~~~~~~~~~D~d~dG~is~~EF~~~~  133 (134)
T d1jfja_          82 KLMDVDG--------DGKLTKEEVTSFFKKHGI---EKVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHCCSS--------SSEEEHHHHHHHHTTTTC---HHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             ccccccc--------CCcccHHHHHHHHHhcCc---HHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence            9999999        999999999999987754   578889999999999999999999987

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=8.1e-19  Score=148.42  Aligned_cols=123  Identities=18%  Similarity=0.277  Sum_probs=103.2

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccC--CCCCceeech------------hhhchhHHH
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADI--DGNGTTLNLS------------LVQCKDTSL  389 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~--~~~g~~~~~~------------~~~~~~~~~  389 (483)
                      +++++|..+|.|++|+|+.+||..+|+.+|..+++.++..++..++.  +++|.+....            .....+.+.
T Consensus         1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~   80 (139)
T d1w7jb1           1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYL   80 (139)
T ss_dssp             CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCH
T ss_pred             CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHH
Confidence            47899999999999999999999999999999999999999988875  3455421111            112245588


Q ss_pred             HHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          390 KDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       390 ~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      .+|+.||+++        +|+|+.+||+++|..+|.. ++++++.++. .+.|+||.|+|+||+++|
T Consensus        81 ~aF~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~e~~~l~~-~~~d~dg~I~~~eF~~~l  138 (139)
T d1w7jb1          81 EGFRVFDKEG--------NGKVMGAELRHVLTTLGEKMTEEEVETVLA-GHEDSNGCINYEAFLKHI  138 (139)
T ss_dssp             HHHHTTCTTS--------SSEEEHHHHHHHHHHSSSCCCHHHHHHHHT-TCCCTTSEEEHHHHHHHT
T ss_pred             HhhhhccCCC--------CCeEeHHHHHHHHHHhCCCCCHHHHHHHHh-hCCCCCCeEeHHHHHHHh
Confidence            9999999999        9999999999999999988 9999998886 488999999999999976

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=4.1e-17  Score=144.26  Aligned_cols=131  Identities=17%  Similarity=0.253  Sum_probs=116.4

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCC-CCCHHHHHHHHHhccCCCCCceeechhhh---chhHHHHHHh
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS-TLTEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTSLKDFN  393 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~-~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~~~~F~  393 (483)
                      ..++...|.++|+.+|.|++|+||.+||..+++.++. ..+.++++.+++.+|.+++|.+....++.   ....+..+|+
T Consensus        14 ~~~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~~~~~~~f~   93 (181)
T d1hqva_          14 ALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFR   93 (181)
T ss_dssp             CCSCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhccccccccc
Confidence            3456678999999999999999999999999999875 47889999999999999999855444443   3566789999


Q ss_pred             hcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          394 IFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       394 ~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      .+|.++        +|+|+.+||++++...|.. +++++..++..+|.+++|.|+|+||+..+.
T Consensus        94 ~~D~~~--------~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~  149 (181)
T d1hqva_          94 TYDRDN--------SGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI  149 (181)
T ss_dssp             HHCTTC--------CSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHH
T ss_pred             cccccc--------cchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            999999        9999999999999999988 999999999999999999999999998874

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=9.9e-17  Score=139.54  Aligned_cols=134  Identities=27%  Similarity=0.437  Sum_probs=110.1

Q ss_pred             hhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh----------
Q 048594          313 IVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV----------  382 (483)
Q Consensus       313 i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~----------  382 (483)
                      ++..++.+++..++++|+.+|+|++|+|+.+||..++.....+    .+++++..+|.+++|.+....++          
T Consensus         6 ~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~~~----~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~   81 (165)
T d1auib_           6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNP----LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG   81 (165)
T ss_dssp             CCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHTCT----THHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTC
T ss_pred             HcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccCCH----HHHHHHHHHccccchhhhhhhhhhhccccccch
Confidence            4567899999999999999999999999999998877655433    35689999999999983332222          


Q ss_pred             hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC-CCC-C----hHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY-NMG-D----DATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       383 ~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~-~~~-~----~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ...+.+..+|+.+|.++        +|+|+.+||.++++.. +.. +    ++.+..++.++|.|+||.|||+||+++|.
T Consensus        82 ~~~~~~~~~f~~~d~d~--------~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~  153 (165)
T d1auib_          82 DKEQKLRFAFRIYDMDK--------DGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVG  153 (165)
T ss_dssp             CHHHHHHHHHHHHCTTC--------SSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHG
T ss_pred             hhHHHHHHHHHHhcccc--------cccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHh
Confidence            23556899999999999        9999999999999774 332 2    45577889999999999999999999997


Q ss_pred             cC
Q 048594          457 TG  458 (483)
Q Consensus       457 ~~  458 (483)
                      .-
T Consensus       154 ~~  155 (165)
T d1auib_         154 GL  155 (165)
T ss_dssp             GG
T ss_pred             cC
Confidence            44

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=99.64  E-value=1.9e-16  Score=140.80  Aligned_cols=133  Identities=23%  Similarity=0.214  Sum_probs=100.9

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHHH-----HHhcCCCCCHHHHHHHHHhcc-----CCCCCceeechh------
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAG-----LSKLGSTLTEVDVKQYMQAAD-----IDGNGTTLNLSL------  381 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~-----l~~~~~~~~~~~~~~l~~~~d-----~~~~g~~~~~~~------  381 (483)
                      +++.+..++++|..+|.|++|+|+.+||..+     ++.+|..++..+...++...+     ....+.+.....      
T Consensus         9 ~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~   88 (189)
T d1qv0a_           9 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQ   88 (189)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHH
Confidence            4677889999999999999999999999764     456688877777665554443     333333110000      


Q ss_pred             --------------hhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcc
Q 048594          382 --------------VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRI  446 (483)
Q Consensus       382 --------------~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i  446 (483)
                                    ....+.+..+|+.||.++        +|+|+.+|+..++..+|.. ++++++.+|..+|.|+||.|
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~--------~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~I  160 (189)
T d1qv0a_          89 LATSELKKWARNEPTLIREWGDAVFDIFDKDG--------SGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDL  160 (189)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHTC------------CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCE
T ss_pred             HHHHhhhccccccHHHHHHHHHHHHHHHccCC--------CCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcE
Confidence                          111334667899999999        9999999999999999988 99999999999999999999


Q ss_pred             cHHHHHHHHHcC
Q 048594          447 SYEEFCATMKTG  458 (483)
Q Consensus       447 ~~~ef~~~~~~~  458 (483)
                      +|+||+++|...
T Consensus       161 s~~EF~~~~~~~  172 (189)
T d1qv0a_         161 DVDEMTRQHLGF  172 (189)
T ss_dssp             EHHHHHHHHHHH
T ss_pred             eHHHHHHHHHHh
Confidence            999999988653

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1e-15  Score=132.52  Aligned_cols=122  Identities=16%  Similarity=0.208  Sum_probs=105.1

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCC-----CHHHHHHHHHhccCCCCCceeechhhh---chhHHHHHHhhcC
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTL-----TEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTSLKDFNIFT  396 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~-----~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~~~~F~~~d  396 (483)
                      +.++|+++ .+.+|+|+.+||..+|+.+|.+.     +.+.++.|+..+|.+++|.+...++..   ....++.+|+.||
T Consensus         2 ~~~~F~~~-a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~~~~~~~F~~fD   80 (165)
T d1k94a_           2 VYTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVD   80 (165)
T ss_dssp             HHHHHHHH-HGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hHHHHHHh-cCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhccchhHHHHHHhC
Confidence            45778888 67899999999999999998754     567899999999999999855444332   3567889999999


Q ss_pred             CCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          397 KPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       397 ~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +|+        +|+|+.+||+.+|+.+|.. ++++++.++..+|.  +|.|+|+||+..|..
T Consensus        81 ~d~--------sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~  132 (165)
T d1k94a_          81 QDG--------SGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVK  132 (165)
T ss_dssp             TTC--------CSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHH
T ss_pred             CCC--------CCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHH
Confidence            999        9999999999999999999 99999999999964  689999999987653

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=99.62  E-value=3.2e-16  Score=150.98  Aligned_cols=133  Identities=19%  Similarity=0.281  Sum_probs=114.1

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh-------------
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV-------------  382 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~-------------  382 (483)
                      .++.++...++++|..+|.|++|+|+.+||+.+|..+|..+++.++..++..+|.+++|.+....+.             
T Consensus       115 ~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~F  194 (321)
T d1ij5a_         115 MLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVADF  194 (321)
T ss_dssp             CCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCCCH
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhHHH
Confidence            4567788899999999999999999999999999999999999999999999999999871110000             


Q ss_pred             -------------------------------------------------------hchhHHHHHHhhcCCCCccchhccc
Q 048594          383 -------------------------------------------------------QCKDTSLKDFNIFTKPSNILIRIMI  407 (483)
Q Consensus       383 -------------------------------------------------------~~~~~~~~~F~~~d~~~~~~~~~~~  407 (483)
                                                                             .....+..+|..+|.|+        
T Consensus       195 ~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~--------  266 (321)
T d1ij5a_         195 RKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDK--------  266 (321)
T ss_dssp             HHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSS--------
T ss_pred             HHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCC--------
Confidence                                                                   00122345799999999        


Q ss_pred             cccccHHHHHHHHhhCCCC--ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          408 SIYITADELEAAFKEYNMG--DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       408 ~g~i~~~el~~~~~~~~~~--~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      +|+|+.+||+++|..+|.+  +++++..+|..+|.|+||+|||+||+.+|-
T Consensus       267 ~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml  317 (321)
T d1ij5a_         267 SGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL  317 (321)
T ss_dssp             CSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            9999999999999999974  788999999999999999999999999874

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=99.62  E-value=3.5e-16  Score=138.74  Aligned_cols=132  Identities=23%  Similarity=0.232  Sum_probs=102.4

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHh-----cCCCCCHHHHHHHHHhccCCCCCc-----eeechhh-----
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSK-----LGSTLTEVDVKQYMQAADIDGNGT-----TLNLSLV-----  382 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~-----~~~~~~~~~~~~l~~~~d~~~~g~-----~~~~~~~-----  382 (483)
                      ++.++.+++++|+.+|.|++|+|+.+||..++..     +|..++..++...+...+.+..+.     ......+     
T Consensus         7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (187)
T d1uhka1           7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK   86 (187)
T ss_dssp             CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHH
Confidence            3456789999999999999999999999766544     577777776666555443322222     1000000     


Q ss_pred             ---------------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcc
Q 048594          383 ---------------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRI  446 (483)
Q Consensus       383 ---------------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i  446 (483)
                                     .....+..+|+.+|.++        +|+|+.+||+++|+.+|.. ++++++.+|..+|.|+||.|
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~--------~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~I  158 (187)
T d1uhka1          87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQ--------NGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQL  158 (187)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTC--------SSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCE
T ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHHHHHccCC--------CcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCE
Confidence                           01234778999999999        9999999999999999988 99999999999999999999


Q ss_pred             cHHHHHHHHHc
Q 048594          447 SYEEFCATMKT  457 (483)
Q Consensus       447 ~~~ef~~~~~~  457 (483)
                      +|+||++++..
T Consensus       159 s~~EF~~~~~~  169 (187)
T d1uhka1         159 DVDEMTRQHLG  169 (187)
T ss_dssp             EHHHHHHHHHH
T ss_pred             eHHHHHHHHHH
Confidence            99999998754

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.61  E-value=1.8e-15  Score=134.52  Aligned_cols=135  Identities=23%  Similarity=0.282  Sum_probs=108.4

Q ss_pred             chHHHhhHHHHHhhcCCC-CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh---------hchhH
Q 048594          318 PAEEIQKHKETFKQMDTN-DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV---------QCKDT  387 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d-~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~~~  387 (483)
                      +.-+..+++++|..|+.+ ++|+|+.+||..++...+...+...++.+|..+|.|++|.+....++         ..++.
T Consensus        16 ~~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~   95 (189)
T d1jbaa_          16 GAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHK   95 (189)
T ss_dssp             CHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHH
T ss_pred             CccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHH
Confidence            344444566666665444 58999999999999999999999999999999999999984443332         23677


Q ss_pred             HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCC-----------------CC-ChHHHHHHHHHHcCCCCCcccHH
Q 048594          388 SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN-----------------MG-DDATIKEIMFEVDRDKDGRISYE  449 (483)
Q Consensus       388 ~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~-----------------~~-~~~~~~~~~~~~d~~~~g~i~~~  449 (483)
                      ++.+|+.||.|+        +|+|+..|+..++..+.                 .. .++.++++|..+|.|+||.|||+
T Consensus        96 ~~~~F~~~D~d~--------~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~  167 (189)
T d1jbaa_          96 LKWTFKIYDKDR--------NGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLN  167 (189)
T ss_dssp             HHHHHHHHCSSC--------SSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHH
T ss_pred             HHHHHhhhccCC--------CCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHH
Confidence            899999999999        99999999999876541                 11 24567889999999999999999


Q ss_pred             HHHHHHHcCCC
Q 048594          450 EFCATMKTGTH  460 (483)
Q Consensus       450 ef~~~~~~~~~  460 (483)
                      ||+.+++....
T Consensus       168 EF~~~~~~~p~  178 (189)
T d1jbaa_         168 EFVEGARRDKW  178 (189)
T ss_dssp             HHHHHHTTTTT
T ss_pred             HHHHHHHhCHH
Confidence            99999987654

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.59  E-value=1.3e-15  Score=134.59  Aligned_cols=132  Identities=14%  Similarity=0.208  Sum_probs=104.4

Q ss_pred             cchHHHhhHHHHHhh-cCCCCCCCcCHHHHHHHHHhcCC----CCCH-----------HHHHHHHHhccCCCCCceeech
Q 048594          317 LPAEEIQKHKETFKQ-MDTNDSGTLTYDEFKAGLSKLGS----TLTE-----------VDVKQYMQAADIDGNGTTLNLS  380 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~-~D~d~~G~l~~~el~~~l~~~~~----~~~~-----------~~~~~l~~~~d~~~~g~~~~~~  380 (483)
                      +++.+..+++.+|+. +|.|++|.|+.+||..++..++.    ....           .....++...|.+++|.+....
T Consensus         2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~   81 (185)
T d2sasa_           2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE   81 (185)
T ss_dssp             CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred             cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence            567788899999997 59999999999999999987631    1111           1234566777888888722211


Q ss_pred             hh------------------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCC
Q 048594          381 LV------------------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDK  442 (483)
Q Consensus       381 ~~------------------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~  442 (483)
                      ..                  .....+..+|+.+|.++        +|+|+.+||+.+++.+|+ ++++++.+|..+|.|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~--------~G~Is~~E~~~~l~~~~l-~~~~~~~~f~~~D~d~  152 (185)
T d2sasa_          82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSG--------DGIVDLEEFQNYCKNFQL-QCADVPAVYNVITDGG  152 (185)
T ss_dssp             HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTS--------SSCCCHHHHHHHTTSSCC-CCSSHHHHHHHHHTTT
T ss_pred             hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCC--------CccCCHHHHHHHHHHcCC-CHHHHHHHHHHcCCCC
Confidence            11                  11344788999999999        999999999999999887 6788999999999999


Q ss_pred             CCcccHHHHHHHHHc
Q 048594          443 DGRISYEEFCATMKT  457 (483)
Q Consensus       443 ~g~i~~~ef~~~~~~  457 (483)
                      ||.|+|+||..++..
T Consensus       153 dG~i~~~EF~~~~~~  167 (185)
T d2sasa_         153 KVTFDLNRYKELYYR  167 (185)
T ss_dssp             TSCCSHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHH
Confidence            999999999988754

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=99.59  E-value=3.5e-16  Score=138.57  Aligned_cols=130  Identities=19%  Similarity=0.261  Sum_probs=93.3

Q ss_pred             cchHHHh-hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCC--------CCHHHHHHHHHhccCCCCCceeechhh---hc
Q 048594          317 LPAEEIQ-KHKETFKQMDTNDSGTLTYDEFKAGLSKLGST--------LTEVDVKQYMQAADIDGNGTTLNLSLV---QC  384 (483)
Q Consensus       317 ~~~~~~~-~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~--------~~~~~~~~l~~~~d~~~~g~~~~~~~~---~~  384 (483)
                      ++++++. .++++|..+| +++|.|+..||..+|..++..        ++.+.++.++..+|.|++|.+....+.   ..
T Consensus        13 ls~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~~   91 (188)
T d1qxpa2          13 LSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNR   91 (188)
T ss_dssp             --------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHc-CCCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Confidence            4555654 5899999999 558999999999998876543        456789999999999999995544433   34


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ...++.+|+.||+|+        +|+|+..||+.+|+.+|.. +++ +.+++...+.|++|.|+|+||+.+|.
T Consensus        92 ~~~~~~~F~~~D~d~--------sG~i~~~El~~~l~~~g~~~~~~-~~~~l~~~~~~~dg~i~f~eFi~~~~  155 (188)
T d1qxpa2          92 IRNYLTIFRKFDLDK--------SGSMSAYEMRMAIEAAGFKLPCQ-LHQVIVARFADDELIIDFDNFVRCLV  155 (188)
T ss_dssp             HHHHHHHHGGGCTTC--------CSCCBHHHHHHHHHHTTEECCHH-HHHHHHHHTSCSSSBCCHHHHHHHHH
T ss_pred             hHHHHHHHHHhCCCC--------CCEECHHHHHHHHHHhhhcCCHH-HHHHHHHHhcCCCCcCCHHHHHHHHH
Confidence            567888999999999        9999999999999999988 655 44555555779999999999999874

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.59  E-value=1e-15  Score=134.06  Aligned_cols=128  Identities=16%  Similarity=0.221  Sum_probs=107.0

Q ss_pred             HHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCC--------CCHHHHHHHHHhccCCCCCceeechhhh---chhHH
Q 048594          320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGST--------LTEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTS  388 (483)
Q Consensus       320 ~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~--------~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~  388 (483)
                      +++.+++++|..+|. ++|.|+..||..+|..+|..        ++.+.+..++..+|.+++|.+....+..   ....+
T Consensus         1 ee~~~~r~~F~~~d~-~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~~~~   79 (173)
T d1alva_           1 EEVRQFRRLFAQLAG-DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKW   79 (173)
T ss_dssp             CHHHHHHHHHHHHHG-GGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHcC-CCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhhhhHH
Confidence            367889999999994 58999999999999987543        4678899999999999999854444332   45667


Q ss_pred             HHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          389 LKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       389 ~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+|+.||.++        +|+|+..||+.+|+..|.. +++.+ +++..+|.|++|.|+|+||+.+|..
T Consensus        80 ~~~f~~~D~d~--------~G~I~~~el~~~L~~~g~~~~~~~~-~~~~~~d~d~~G~i~~~EF~~~~~~  140 (173)
T d1alva_          80 QAIYKQFDVDR--------SGTIGSSELPGAFEAAGFHLNEHLY-SMIIRRYSDEGGNMDFDNFISCLVR  140 (173)
T ss_dssp             HHHHHHHCTTC--------CSSBCTTTHHHHHHHHTCCCCHHHH-HHHHHHHTCSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHhccCC--------CCeecHHHHHHHHHHHHHhhHHHHH-HHhhccccCCCCeEeHHHHHHHHHH
Confidence            88999999999        9999999999999999988 65555 4555777799999999999998843

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.6e-15  Score=131.38  Aligned_cols=130  Identities=16%  Similarity=0.215  Sum_probs=111.2

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCC-----CHHHHHHHHHhccCCCCCceeechhhh---chhHHH
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTL-----TEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTSL  389 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~-----~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~~  389 (483)
                      +.++...+++.|..+| ++||.|+..||..+|+.+|.++     +.++++.++..+|.|++|.+....+..   ....+.
T Consensus         2 p~~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~~~~~   80 (172)
T d1juoa_           2 PGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWR   80 (172)
T ss_dssp             TTCCCCTTHHHHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhhhhhh
Confidence            4455667899999997 7899999999999999998654     578899999999999999965544332   356678


Q ss_pred             HHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          390 KDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       390 ~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      .+|+.||+++        +|+|+.+|+..+|..+|.. +++++..+++++|  .+|.|+|+||+.+|...
T Consensus        81 ~~f~~~D~d~--------sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d--~~g~i~~~eF~~~~~~~  140 (172)
T d1juoa_          81 QHFISFDTDR--------SGTVDPQELQKALTTMGFRLSPQAVNSIAKRYS--TNGKITFDDYIACCVKL  140 (172)
T ss_dssp             HHHHTTCTTC--------CSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTC--SSSSEEHHHHHHHHHHH
T ss_pred             HHHHHhCcCC--------CCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHH--hcCCcCHHHHHHHHHHH
Confidence            8999999999        9999999999999999998 9999999999985  56889999999988643

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=99.58  E-value=7.7e-16  Score=136.54  Aligned_cols=131  Identities=15%  Similarity=0.171  Sum_probs=109.0

Q ss_pred             chHHH-hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCC--------CCCHHHHHHHHHhccCCCCCceeechhhh---ch
Q 048594          318 PAEEI-QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS--------TLTEVDVKQYMQAADIDGNGTTLNLSLVQ---CK  385 (483)
Q Consensus       318 ~~~~~-~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~--------~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~  385 (483)
                      +.+++ +.++++|..+| |++|.|+..||..+|..+|.        .++.+.+..++..+|.+++|.+....+..   ..
T Consensus        12 ~~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~   90 (186)
T d1df0a1          12 NEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI   90 (186)
T ss_dssp             CCSCSCHHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhH
Confidence            44444 45899999998 99999999999999988753        35678899999999999999854444332   35


Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+..+|+.||+++        +|+|+.+||+.+|+.+|.....++.+++...|.|++|.|+|+||+.+|..
T Consensus        91 ~~~~~~F~~~D~d~--------sG~I~~~El~~~l~~~g~~~~~~~~~~~~~~d~d~dg~I~f~eFi~~~~~  154 (186)
T d1df0a1          91 QKYQKIYREIDVDR--------SGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVR  154 (186)
T ss_dssp             HHHHHHHHHHCTTC--------CSCEEGGGHHHHHHHTTEECCHHHHHHHHHHHCCSTTEECHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCCC--------CCcccHHHHHHHHHHHHhcccHHHHHHHHHHHcCCCCeEeHHHHHHHHHH
Confidence            66889999999999        99999999999999999883345567777899999999999999998743

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.58  E-value=5.1e-15  Score=130.76  Aligned_cols=139  Identities=21%  Similarity=0.272  Sum_probs=113.6

Q ss_pred             hhccchHHHhhHHHHHhhcCCC--CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh---------
Q 048594          314 VENLPAEEIQKHKETFKQMDTN--DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV---------  382 (483)
Q Consensus       314 ~~~~~~~~~~~l~~~F~~~D~d--~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~---------  382 (483)
                      ...++.+++..+++.|..+|.+  ++|.|+.+||..++..++..... .++.+|+.+|.+++|.+....++         
T Consensus         8 ~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~-~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~   86 (183)
T d2zfda1           8 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL-FADRVFDLFDTKHNGILGFEEFARALSVFHPN   86 (183)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCCH-HHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTT
T ss_pred             hCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCCH-HHHHHHHHHccCCCCcCcHHHHHHHHHhhhcc
Confidence            3568999999999999999865  69999999999999888766544 57899999999999984333222         


Q ss_pred             -hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC----CCC-ChHH----HHHHHHHHcCCCCCcccHHHHH
Q 048594          383 -QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY----NMG-DDAT----IKEIMFEVDRDKDGRISYEEFC  452 (483)
Q Consensus       383 -~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~----~~~-~~~~----~~~~~~~~d~~~~g~i~~~ef~  452 (483)
                       ..++.+..+|+.||.||        +|+|+.+|++.++..+    |.. ++..    +..+|.++|.|+||.|+|+||+
T Consensus        87 ~~~~~~~~~~F~~~D~d~--------~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~  158 (183)
T d2zfda1          87 APIDDKIHFSFQLYDLKQ--------QGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWR  158 (183)
T ss_dssp             SCHHHHHHHHHHHHCTTS--------SSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHH
T ss_pred             CcHHHHHHHhhcccccCC--------CCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence             23567889999999999        9999999999987653    444 4444    5567889999999999999999


Q ss_pred             HHHHcCCCC
Q 048594          453 ATMKTGTHL  461 (483)
Q Consensus       453 ~~~~~~~~~  461 (483)
                      .++......
T Consensus       159 ~~~~~~p~~  167 (183)
T d2zfda1         159 SLVLRHPSL  167 (183)
T ss_dssp             HHHHHSGGG
T ss_pred             HHHHHCHHH
Confidence            999876543

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.57  E-value=7.3e-15  Score=128.36  Aligned_cols=130  Identities=18%  Similarity=0.261  Sum_probs=102.9

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhc----CCCCCHHHH-----------HHHHHhccCCCCCceeech-----
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKL----GSTLTEVDV-----------KQYMQAADIDGNGTTLNLS-----  380 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~----~~~~~~~~~-----------~~l~~~~d~~~~g~~~~~~-----  380 (483)
                      ..++++++|+.+|.|++|.|+.+||+.++..+    +......++           ..++...+.+.+|.+....     
T Consensus         5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   84 (176)
T d1nyaa_           5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT   84 (176)
T ss_dssp             HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence            34578999999999999999999999999876    333333222           3456666788887621111     


Q ss_pred             ------------hhhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccH
Q 048594          381 ------------LVQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISY  448 (483)
Q Consensus       381 ------------~~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~  448 (483)
                                  .......+..+|..||.++        +|+|+.+|++.++..+|. ++++++.+|..+|.|+||.|+|
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~--------dG~Is~~E~~~~~~~~~~-~~~~~~~~f~~~D~d~dG~i~~  155 (176)
T d1nyaa_          85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNA--------DGQINADEFAAWLTALGM-SKAEAAEAFNQVDTNGNGELSL  155 (176)
T ss_dssp             HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSC--------CSEEEHHHHHHHHHHTTC-CHHHHHHHHHHHCTTCSSEEEH
T ss_pred             hhhhhhhhhhhhHHHHHHHHHHHHHHHccCC--------ChhhhHHHHHHHHHhcCC-cHHHHHHHHHHHCCCCCCcEeH
Confidence                        1112355788999999999        999999999999999987 6889999999999999999999


Q ss_pred             HHHHHHHHcCC
Q 048594          449 EEFCATMKTGT  459 (483)
Q Consensus       449 ~ef~~~~~~~~  459 (483)
                      +||+.+|+...
T Consensus       156 ~Ef~~~~~~~~  166 (176)
T d1nyaa_         156 DELLTAVRDFH  166 (176)
T ss_dssp             HHHHHHHSCCS
T ss_pred             HHHHHHHHHHh
Confidence            99999997654

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=99.56  E-value=1.1e-14  Score=127.38  Aligned_cols=131  Identities=17%  Similarity=0.207  Sum_probs=98.9

Q ss_pred             hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcC----CCCCHHH-----HHHHHHhc--cCCCCCceeechhh-----
Q 048594          319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG----STLTEVD-----VKQYMQAA--DIDGNGTTLNLSLV-----  382 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~----~~~~~~~-----~~~l~~~~--d~~~~g~~~~~~~~-----  382 (483)
                      +-..++++++|+.+|.|++|+|+.+||..++..++    ......+     ....+..+  +.++++.+.....+     
T Consensus         2 ~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~   81 (174)
T d2scpa_           2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKE   81 (174)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHh
Confidence            44667899999999999999999999999988762    2222211     22233333  45555552221111     


Q ss_pred             ---------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHH
Q 048594          383 ---------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCA  453 (483)
Q Consensus       383 ---------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~  453 (483)
                               .....+..+|+.+|.+|        +|+|+.+|+..+|+.+|. +++++..++..+|.|+||.|+|+||+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~F~~~D~d~--------dG~Is~~E~~~~l~~~~~-~~~~~~~~f~~~D~d~dG~Is~~Ef~~  152 (174)
T d2scpa_          82 MVKNPEAKSVVEGPLPLFFRAVDTNE--------DNNISRDEYGIFFGMLGL-DKTMAPASFDAIDTNNDGLLSLEEFVI  152 (174)
T ss_dssp             HTSCGGGTHHHHTHHHHHHHHHCTTC--------SSSEEHHHHHHHHHHTTC-CGGGHHHHHHHHCTTCSSEECHHHHHH
T ss_pred             hhcchhhHHHHHHHHHHHHHHHCCCc--------cccCCHHHHHHHHHHHhh-hhHHHHHHHhhcCCCCCCcEeHHHHHH
Confidence                     12445788999999999        999999999999999988 678899999999999999999999999


Q ss_pred             HHHcC
Q 048594          454 TMKTG  458 (483)
Q Consensus       454 ~~~~~  458 (483)
                      +++.-
T Consensus       153 ~~~~f  157 (174)
T d2scpa_         153 AGSDF  157 (174)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87543

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=6.8e-15  Score=130.44  Aligned_cols=134  Identities=16%  Similarity=0.207  Sum_probs=109.4

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCC-HHHHHHHHHhccCCCCCceeechhh---------hch
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLT-EVDVKQYMQAADIDGNGTTLNLSLV---------QCK  385 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~-~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~  385 (483)
                      .++..++..+.+.|...|  ++|.++.+++..++..++.... ...++.+|+.+|.+++|.+....++         ..+
T Consensus        18 ~fs~~Ei~~l~~~F~~~~--~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~   95 (187)
T d1g8ia_          18 YFTEKEVQQWYKGFIKDC--PSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLD   95 (187)
T ss_dssp             SSCHHHHHHHHHHHHHHC--TTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHH
T ss_pred             CCCHHHHHHHHHHHHHHC--CCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchh
Confidence            468889989999997765  7899999999999999876654 4556889999999999984433322         236


Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCC--------CC-----ChHHHHHHHHHHcCCCCCcccHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN--------MG-----DDATIKEIMFEVDRDKDGRISYEEFC  452 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~--------~~-----~~~~~~~~~~~~d~~~~g~i~~~ef~  452 (483)
                      ++++.+|+.||.||        +|+|+.+|+..++..+.        .+     .++.++.+|.++|.|+||+|||+||+
T Consensus        96 e~l~~~F~~~D~d~--------dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~  167 (187)
T d1g8ia_          96 EKLRWAFKLYDLDN--------DGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQ  167 (187)
T ss_dssp             HHHHHHHHHHCTTC--------SSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHH
T ss_pred             hhHHHHHHHHhcCC--------CCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            77899999999999        99999999999987541        11     24568889999999999999999999


Q ss_pred             HHHHcCC
Q 048594          453 ATMKTGT  459 (483)
Q Consensus       453 ~~~~~~~  459 (483)
                      +++....
T Consensus       168 ~~~~~~p  174 (187)
T d1g8ia_         168 EGSKADP  174 (187)
T ss_dssp             HHHHHCH
T ss_pred             HHHHHCH
Confidence            9987654

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.55  E-value=7.6e-15  Score=129.37  Aligned_cols=135  Identities=20%  Similarity=0.294  Sum_probs=111.3

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCC-CHHHHHHHHHhccCCCCCceeechhh---------hc
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTL-TEVDVKQYMQAADIDGNGTTLNLSLV---------QC  384 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~-~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~  384 (483)
                      ..++.+++..+.+.|...  +++|+|+.+||..++..++... +...++++|+.+|.+++|.+....++         ..
T Consensus        16 t~fs~~ei~~l~~~F~~~--~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~   93 (181)
T d1bjfa_          16 TDFTEHEIQEWYKGFLRD--CPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL   93 (181)
T ss_dssp             SSCCHHHHHHHHHHHHHH--STTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred             cCCCHHHHHHHHHHHHhh--CCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhch
Confidence            357889999999999765  4789999999999999987554 45668999999999999984333322         23


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCC------------CC-ChHHHHHHHHHHcCCCCCcccHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN------------MG-DDATIKEIMFEVDRDKDGRISYEEF  451 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~------------~~-~~~~~~~~~~~~d~~~~g~i~~~ef  451 (483)
                      ++.++.+|+.||.++        +|+|+.+|+..++..+.            .. .++.++.+|..+|.|+||.|||+||
T Consensus        94 ~~~~~~~f~~~D~d~--------dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF  165 (181)
T d1bjfa_          94 EQKLKWAFSMYDLDG--------NGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF  165 (181)
T ss_dssp             HHHHHHHHHHHCTTC--------SSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHH
T ss_pred             HHHHHHHHHHhccCC--------CCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHH
Confidence            677899999999999        99999999999998652            12 3567899999999999999999999


Q ss_pred             HHHHHcCC
Q 048594          452 CATMKTGT  459 (483)
Q Consensus       452 ~~~~~~~~  459 (483)
                      ++++....
T Consensus       166 ~~~~~~~p  173 (181)
T d1bjfa_         166 IRGAKSDP  173 (181)
T ss_dssp             HHHHHHCT
T ss_pred             HHHHHhCH
Confidence            99997665

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.54  E-value=1.3e-14  Score=129.04  Aligned_cols=135  Identities=21%  Similarity=0.247  Sum_probs=111.3

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCC-HHHHHHHHHhccCCCCCceeechhh---------hch
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLT-EVDVKQYMQAADIDGNGTTLNLSLV---------QCK  385 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~-~~~~~~l~~~~d~~~~g~~~~~~~~---------~~~  385 (483)
                      .++..++..+.+.|...+  ++|.|+..|+..++..++.... .+.++.+|+.+|.+++|.+....++         ..+
T Consensus        21 ~fs~~Ei~~l~~~F~~~~--~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~   98 (190)
T d1fpwa_          21 YFDRREIQQWHKGFLRDC--PSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLE   98 (190)
T ss_dssp             CSTHHHHHHHHHHHHHHC--TTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCST
T ss_pred             CCCHHHHHHHHHHHHHHC--CCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCchH
Confidence            478899999999997665  6899999999999999875544 4457899999999999984333322         347


Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCC--------C-----ChHHHHHHHHHHcCCCCCcccHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM--------G-----DDATIKEIMFEVDRDKDGRISYEEFC  452 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~--------~-----~~~~~~~~~~~~d~~~~g~i~~~ef~  452 (483)
                      +.++.+|+.||.|+        +|+|+.+|+..+++.+..        .     .++.++++|.++|.|+||.|+|+||+
T Consensus        99 e~~~~~F~~~D~d~--------dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~  170 (190)
T d1fpwa_          99 EKLSWAFELYDLNH--------DGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR  170 (190)
T ss_dssp             HHHHHHHHHHCSSC--------SSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHH
T ss_pred             HHHHHHHHHhccCC--------CCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            88999999999999        999999999999976521        0     14678899999999999999999999


Q ss_pred             HHHHcCCC
Q 048594          453 ATMKTGTH  460 (483)
Q Consensus       453 ~~~~~~~~  460 (483)
                      .++....+
T Consensus       171 ~~~~~~p~  178 (190)
T d1fpwa_         171 EGSKVDPS  178 (190)
T ss_dssp             HHHHSSTT
T ss_pred             HHHHHCHH
Confidence            99988765

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.52  E-value=2e-14  Score=128.91  Aligned_cols=135  Identities=16%  Similarity=0.176  Sum_probs=109.4

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCC-CHHHHHHHHHhccCCCCCceeechhh---------hc
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTL-TEVDVKQYMQAADIDGNGTTLNLSLV---------QC  384 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~-~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~  384 (483)
                      ..++.+++..+.+.|...+  ++|.|+.+||..++..++... +...++.+|..+|.+++|.+....++         ..
T Consensus        20 t~f~~~ei~~l~~~F~~~~--~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~   97 (201)
T d1omra_          20 TKFTEEELSSWYQSFLKEC--PSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT   97 (201)
T ss_dssp             CSSCHHHHHHHHHHHHHHC--TTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCG
T ss_pred             CCCCHHHHHHHHHHHHHHC--cCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch
Confidence            3578899999999996554  689999999999999997654 45567899999999999985444333         23


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC---------------ChHHHHHHHHHHcCCCCCcccHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG---------------DDATIKEIMFEVDRDKDGRISYE  449 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~---------------~~~~~~~~~~~~d~~~~g~i~~~  449 (483)
                      ++.++.+|+.||.||        +|+|+.+|+..+++.+...               .++.++.+|..+|.|+||.|||+
T Consensus        98 ~~~l~~~F~~~D~d~--------~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~  169 (201)
T d1omra_          98 NQKLEWAFSLYDVDG--------NGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEK  169 (201)
T ss_dssp             GGSHHHHHHHHCTTC--------SSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHH
T ss_pred             HHHHHHHHHHHccCC--------CCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHH
Confidence            667899999999999        9999999999998765221               13457889999999999999999


Q ss_pred             HHHHHHHcCC
Q 048594          450 EFCATMKTGT  459 (483)
Q Consensus       450 ef~~~~~~~~  459 (483)
                      ||+..+....
T Consensus       170 EF~~~~~~~~  179 (201)
T d1omra_         170 EFIEGTLANK  179 (201)
T ss_dssp             HHHHHHHHCH
T ss_pred             HHHHHHHHCH
Confidence            9999876543

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.48  E-value=1.2e-13  Score=121.18  Aligned_cols=135  Identities=19%  Similarity=0.258  Sum_probs=108.5

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCC-CHHHHHHHHHhccCCCCCceeechhh---------hc
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTL-TEVDVKQYMQAADIDGNGTTLNLSLV---------QC  384 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~-~~~~~~~l~~~~d~~~~g~~~~~~~~---------~~  384 (483)
                      ..++..++..+.+.|...|  ++|+|+.+||..++..++... +...++.+|+.+|.+++|.+....++         ..
T Consensus         8 t~ft~~ei~~l~~~F~~~~--~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~   85 (178)
T d1s6ca_           8 TNFTKRELQVLYRGFKNEC--PSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV   85 (178)
T ss_dssp             SSCCHHHHHHHHHHHHHHC--TTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred             CCCCHHHHHHHHHHHHHHC--cCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccch
Confidence            4578889888888887655  679999999999999987655 45557999999999999984333332         23


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC----C--------CC-ChHHHHHHHHHHcCCCCCcccHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY----N--------MG-DDATIKEIMFEVDRDKDGRISYEEF  451 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~----~--------~~-~~~~~~~~~~~~d~~~~g~i~~~ef  451 (483)
                      .+.++.+|+.||.++        +|+|+.+|+..++..+    +        .. .++.++.+|+.+|.|+||.|||+||
T Consensus        86 ~~~~~~~f~~~D~~~--------~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF  157 (178)
T d1s6ca_          86 HEKLRWTFNLYDINK--------DGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF  157 (178)
T ss_dssp             HHHHHHHHHHHCTTC--------SSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHH
T ss_pred             HHHHHHHHHhhccCC--------CCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHH
Confidence            677889999999999        9999999999887654    1        11 2556788999999999999999999


Q ss_pred             HHHHHcCC
Q 048594          452 CATMKTGT  459 (483)
Q Consensus       452 ~~~~~~~~  459 (483)
                      +.++....
T Consensus       158 ~~~i~~~~  165 (178)
T d1s6ca_         158 LESCQEDD  165 (178)
T ss_dssp             HHHTTSCC
T ss_pred             HHHHHHCH
Confidence            99887654

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.46  E-value=6.7e-14  Score=103.95  Aligned_cols=67  Identities=25%  Similarity=0.487  Sum_probs=63.6

Q ss_pred             hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       383 ~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .++++++.+|+.||+++        +|+|+.+||+.+|+.+|.. ++++++.++..+|.|++|.|+|+||+.+|..
T Consensus         6 ~~eeel~~~F~~fD~~~--------~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~   73 (75)
T d1jc2a_           6 KSEEELANCFRIFDKNA--------DGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG   73 (75)
T ss_dssp             CCHHHHHHHHHHHCCST--------TSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred             CcHHHHHHHHHHHcCCC--------cCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            35688999999999999        9999999999999999999 9999999999999999999999999999964

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.46  E-value=4.1e-14  Score=102.03  Aligned_cols=63  Identities=32%  Similarity=0.559  Sum_probs=60.6

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      +++++.+|+.||+++        +|+|+.+||+.+++.+|.. +++++..++..+|.|++|.|+|+||+++|
T Consensus         2 eeel~~aF~~fD~d~--------~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m   65 (65)
T d1fw4a_           2 EEEIREAFRVFDKDG--------NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM   65 (65)
T ss_dssp             CHHHHHHHHHHCTTC--------SSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCC--------CCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence            578999999999999        9999999999999999999 99999999999999999999999999875

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.45  E-value=1.2e-13  Score=110.40  Aligned_cols=94  Identities=24%  Similarity=0.432  Sum_probs=75.6

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccchh
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIR  404 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~~~  404 (483)
                      +.+++..+|  .+|.|+..||..++..-+                             .+.++++.+|+.||+|+     
T Consensus        11 i~~~~~~~~--~~G~idf~eF~~~~~~~~-----------------------------~~~~~l~~~F~~~D~d~-----   54 (109)
T d5pala_          11 INKAISAFK--DPGTFDYKRFFHLVGLKG-----------------------------KTDAQVKEVFEILDKDQ-----   54 (109)
T ss_dssp             HHHHHHHTC--STTCCCHHHHHHHHTCTT-----------------------------CCHHHHHHHHHHHCTTC-----
T ss_pred             HHHHHHhcC--CCCcCcHHHHHHHHHhcC-----------------------------CCHHHHHHHHhhhcCCC-----
Confidence            445555555  567899988865443100                             12457889999999999     


Q ss_pred             ccccccccHHHHHHHHhhC---CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          405 IMISIYITADELEAAFKEY---NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       405 ~~~~g~i~~~el~~~~~~~---~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                         +|+|+.+||+++++.+   |.. ++++++++++.+|.|+||.|+|+||+++|..
T Consensus        55 ---~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d5pala_          55 ---SGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             ---SSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             ---CCeEcHHHHHHHHHHhhhccCcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence               9999999999999876   556 8999999999999999999999999999864

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.44  E-value=1.6e-13  Score=109.58  Aligned_cols=94  Identities=22%  Similarity=0.354  Sum_probs=75.3

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccchh
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIR  404 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~~~  404 (483)
                      +.++++.+|  ++|.|+..||..++...+                             ...+.++.+|+.||+|+     
T Consensus        11 I~~~~~~~d--~dG~idf~EF~~~~~~~~-----------------------------~~~~~~~~~F~~~D~d~-----   54 (109)
T d1pvaa_          11 IKKALDAVK--AEGSFNHKKFFALVGLKA-----------------------------MSANDVKKVFKAIDADA-----   54 (109)
T ss_dssp             HHHHHHHTC--STTCCCHHHHHHHHTCTT-----------------------------SCHHHHHHHHHHHCTTC-----
T ss_pred             HHHHHHhcC--CCCCCcHHHHHHHHHHcc-----------------------------CCHHHHHHHhhCccCCC-----
Confidence            334444444  668899888876553211                             12356788999999999     


Q ss_pred             ccccccccHHHHHHHHhhC---CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          405 IMISIYITADELEAAFKEY---NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       405 ~~~~g~i~~~el~~~~~~~---~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                         +|+|+.+||+.+++.+   |.. ++++++++++.+|.|+||.|+|+||+.+|..
T Consensus        55 ---~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d1pvaa_          55 ---SGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE  108 (109)
T ss_dssp             ---SSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             ---cCeEcHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence               9999999999999887   555 8999999999999999999999999999964

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=2e-13  Score=119.84  Aligned_cols=132  Identities=14%  Similarity=0.189  Sum_probs=95.5

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCc--------CHHHHHHHHHhcCCCCCHHHHHHHHHhccCC-CCCceeechhh----
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTL--------TYDEFKAGLSKLGSTLTEVDVKQYMQAADID-GNGTTLNLSLV----  382 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l--------~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~-~~g~~~~~~~~----  382 (483)
                      .++.+++..+++.|..+|++++|.+        +.+++..+..--..++    ++++|+.+|.+ ++|.+....++    
T Consensus        10 ~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~~l~~~~~----~~rif~~fd~~~~~g~I~f~EFv~~l~   85 (180)
T d1xo5a_          10 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPF----KERICRVFSTSPAKDSLSFEDFLDLLS   85 (180)
T ss_dssp             CSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSHHHHTCTT----HHHHHHHHCCSTTCCEECHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCcCccccccccccceEcHHHHhcCcccccChH----HHHHHHhccCCCCCCcCcHHHHHHHHH
Confidence            5688888899999999888887664        4555543322111122    45788888876 57773332221    


Q ss_pred             ------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC-----CCC-ChHH----HHHHHHHHcCCCCCcc
Q 048594          383 ------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY-----NMG-DDAT----IKEIMFEVDRDKDGRI  446 (483)
Q Consensus       383 ------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~-----~~~-~~~~----~~~~~~~~d~~~~g~i  446 (483)
                            ..+++++.+|+.||.||        +|+|+.+||.++++.+     +.. ++++    ++.++.++|.|+||.|
T Consensus        86 ~~~~~~~~~~kl~~~F~~~D~d~--------~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~I  157 (180)
T d1xo5a_          86 VFSDTATPDIKSHYAFRIFDFDD--------DGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTI  157 (180)
T ss_dssp             HHSTTSCHHHHHHHHHHHHCTTC--------SSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSB
T ss_pred             HHhhcCCHHHHHHHhhccccCCC--------CCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcC
Confidence                  23578899999999999        9999999999999876     222 3333    5567889999999999


Q ss_pred             cHHHHHHHHHcCC
Q 048594          447 SYEEFCATMKTGT  459 (483)
Q Consensus       447 ~~~ef~~~~~~~~  459 (483)
                      ||+||.+++...+
T Consensus       158 s~~EF~~~~~~~P  170 (180)
T d1xo5a_         158 NLSEFQHVISRSP  170 (180)
T ss_dssp             CHHHHHHHHHHCH
T ss_pred             cHHHHHHHHHhCH
Confidence            9999999997653

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.42  E-value=8.9e-14  Score=101.08  Aligned_cols=65  Identities=28%  Similarity=0.425  Sum_probs=61.0

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC--ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG--DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~--~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +++++++|+.||+++        +|+|+.+||+++++.+|..  ++++++.++..+|.|+||.|+|+||+.+|..
T Consensus         1 eeel~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r   67 (68)
T d1c7va_           1 EEEILRAFKVFDANG--------DGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   67 (68)
T ss_dssp             CHHHHHHHHHHSCSG--------GGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             CHHHHHHHHHHcCCC--------cCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            367899999999999        9999999999999999874  8999999999999999999999999999965

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.42  E-value=1.7e-13  Score=103.44  Aligned_cols=66  Identities=30%  Similarity=0.508  Sum_probs=63.0

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ++++++++|+.||++|        +|+|+.+||+.+|+.+|.. ++++++.++..+|.|+||.|+|+||+.+|+.
T Consensus        13 ~ee~l~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~   79 (81)
T d1fi5a_          13 TEEELSDLFRMFDKNA--------DGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG   79 (81)
T ss_dssp             CHHHHHHHHHHHCSSC--------SSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred             CHHHHHHHHHHHcCCC--------CCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            5678999999999999        9999999999999999998 9999999999999999999999999999964

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.39  E-value=2.7e-13  Score=101.32  Aligned_cols=68  Identities=29%  Similarity=0.466  Sum_probs=64.1

Q ss_pred             hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       383 ~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      .++++++++|+.||+++        +|+|+.+||+++|+.+|.. +++++..++..+|.|++|.|+|+||+++|+..
T Consensus         6 d~~e~l~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~   74 (77)
T d1oqpa_           6 DSREEILKAFRLFDDDN--------SGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKT   74 (77)
T ss_dssp             SHHHHHHHHHHHHCTTC--------SSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHcCCC--------CCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcc
Confidence            45678999999999999        9999999999999999998 99999999999999999999999999999765

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.38  E-value=9.5e-13  Score=104.68  Aligned_cols=65  Identities=31%  Similarity=0.489  Sum_probs=59.6

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCC---CC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN---MG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~---~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .++++.+|+.||+++        +|+|+..||+.+++.++   .. ++++++.+++.+|.|+||.|+|+||+.+|+.
T Consensus        39 ~~~l~~~F~~~D~d~--------~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~a  107 (107)
T d2pvba_          39 LDDVKKAFYVIDQDK--------SGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIKA  107 (107)
T ss_dssp             HHHHHHHHHHHCTTC--------SSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHHHhhccCC--------CCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcC
Confidence            457899999999999        99999999999999984   34 8899999999999999999999999999863

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.36  E-value=3.9e-13  Score=95.42  Aligned_cols=60  Identities=25%  Similarity=0.469  Sum_probs=57.7

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCA  453 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~  453 (483)
                      ++++++|+.||+++        +|+|+.+||+++|+.+|.. +++++..++..+|.|++|.|+|+||++
T Consensus         1 Eel~~aF~~fD~~~--------~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           1 EDFVKAFQVFDKES--------TGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHHCTTC--------CSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             ChHHHHHHHHCCCC--------CCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            47899999999999        9999999999999999999 999999999999999999999999985

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.36  E-value=6.9e-13  Score=96.09  Aligned_cols=63  Identities=19%  Similarity=0.332  Sum_probs=60.1

Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .++++|+.||+++        +|+|+.+||+.+++.+|.. +++++++++..+|.|+||.|+|+||+.+|..
T Consensus         2 ~~r~~F~~~D~d~--------~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~   65 (67)
T d1tiza_           2 SAKRVFEKFDKNK--------DGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             THHHHHHHHCTTS--------SSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             hHHHHHHHHCCCC--------cCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            4688999999999        9999999999999999999 9999999999999999999999999999864

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.36  E-value=5.9e-13  Score=100.32  Aligned_cols=67  Identities=25%  Similarity=0.365  Sum_probs=61.9

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      ...++++|+.||+|+        +|+|+.+||+.+|+.+|..+++++.+++.++|.|++|.|+|+||+.+|+...
T Consensus         5 ~~e~~~~F~~~D~d~--------~G~I~~~El~~~l~~lg~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~~   71 (81)
T d2opoa1           5 IADRERIFKRFDTNG--------DGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR   71 (81)
T ss_dssp             HHHHHHHHHHHCTTC--------SSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHCCCC--------CCCCcHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHCc
Confidence            356889999999999        9999999999999999955899999999999999999999999999997653

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.36  E-value=7.8e-13  Score=99.67  Aligned_cols=64  Identities=25%  Similarity=0.389  Sum_probs=60.6

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+++++|+.||++|        +|+|+..||+.+|+.+|.. ++.++.+++..+|.|++|.|+|+||+.+|..
T Consensus        14 ~el~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_          14 AEFKAAFDMFDADG--------GGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             HHHHHHHHHHCTTC--------SSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCC--------CCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            45788999999999        9999999999999999999 9999999999999999999999999999864

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.35  E-value=8.7e-13  Score=105.15  Aligned_cols=66  Identities=23%  Similarity=0.391  Sum_probs=60.0

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCC---CC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN---MG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~---~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+.++++|+.||+|+        +|+|+.+||+.+++.++   .. ++++++.++..+|.|+||.|+|+||+.+|++
T Consensus        39 ~~~~l~~~F~~~D~d~--------~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~s  108 (108)
T d1rroa_          39 SASQVKDIFRFIDNDQ--------SGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS  108 (108)
T ss_dssp             CHHHHHHHHHHHCTTC--------SSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHTC
T ss_pred             CHHHHHHHHhhhcCCC--------CCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcC
Confidence            3567899999999999        99999999999999874   44 7899999999999999999999999999963

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.34  E-value=6.7e-13  Score=97.97  Aligned_cols=64  Identities=27%  Similarity=0.463  Sum_probs=60.8

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+++.+|+.||+++        +|+|+.+||+.+++.+|.. +++++..++..+|.|++|.|+|+||+.+|..
T Consensus         8 ~el~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~   72 (73)
T d2pq3a1           8 AEFKEAFSLFDKDG--------DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR   72 (73)
T ss_dssp             HHHHHHHHHTCTTS--------SSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCC--------CceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            46789999999999        9999999999999999998 9999999999999999999999999999863

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.32  E-value=2.5e-12  Score=102.72  Aligned_cols=65  Identities=32%  Similarity=0.476  Sum_probs=59.0

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCC---C-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM---G-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~---~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+.++.+|+.||++|        +|+|+.+||+++++.++.   . ++++++.++..+|.|+||.|+|+||+.+|..
T Consensus        40 ~~~~~~~F~~~D~d~--------~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~  108 (109)
T d1rwya_          40 ADDVKKVFHILDKDK--------SGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             HHHHHHHHHHHSTTC--------SSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             HHHHHHHhhcccCCC--------CCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            457788999999999        999999999999998743   3 7899999999999999999999999999964

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.32  E-value=1e-12  Score=98.14  Aligned_cols=65  Identities=25%  Similarity=0.451  Sum_probs=61.2

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      .+++++|+.||+++        +|+|+.+||+.+|+.+|.. +++++.+++..+|.+++|.|+|+||+.+|...
T Consensus        10 ~el~~~F~~~D~d~--------~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~~   75 (77)
T d1f54a_          10 AEFKEAFALFDKDN--------NGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQ   75 (77)
T ss_dssp             HHHHHHHHHTCTTC--------SSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCCC--------CCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence            46788999999999        9999999999999999999 99999999999999999999999999999543

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.32  E-value=1.9e-12  Score=97.53  Aligned_cols=66  Identities=24%  Similarity=0.406  Sum_probs=61.2

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ...++++|+.||++|+       +|+|+..||+.+|+.+|.. +++++++++.++|.|++|.|+|+||+.+|..
T Consensus        14 ~~~~~~~F~~fD~d~~-------~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1          14 KNEFKAAFDIFVLGAE-------DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HHHHHHHHHHHTTTCT-------TSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCcCC-------CCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            3567899999999962       6999999999999999998 9999999999999999999999999999975

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.23  E-value=2.6e-12  Score=95.50  Aligned_cols=67  Identities=27%  Similarity=0.478  Sum_probs=58.2

Q ss_pred             chhHHHHHHhhcCCC-CccchhccccccccHHHHHHHHhhCCCC---ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFTKP-SNILIRIMISIYITADELEAAFKEYNMG---DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~-~~~~~~~~~~g~i~~~el~~~~~~~~~~---~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      +.++++.+|+.||.+ ++       +|+|+.+||+++|+.+|..   +++++.+++..+|.|+||.|+|+||+.+|..
T Consensus         3 s~eel~~~F~~fd~~~~~-------~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~   73 (76)
T d1qx2a_           3 SPEEIKGAFEVFAAKEGD-------PNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK   73 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSC-------TTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcccCCC-------CCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence            567899999999764 32       6999999999999998754   3567999999999999999999999999864

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.19  E-value=3.3e-12  Score=97.47  Aligned_cols=61  Identities=33%  Similarity=0.404  Sum_probs=57.9

Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      .++++|+.||+++        +|+|+..||+.+|+.+|.. +++++++++.++|.|++|.|+|+||+.+|
T Consensus        24 ~l~~~F~~~D~d~--------~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          24 GLKELFKMIDTDN--------SGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             TTTTHHHHHCTTC--------SSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHcCCC--------CCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            4778999999999        9999999999999999998 99999999999999999999999999765

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=3.4e-11  Score=90.99  Aligned_cols=63  Identities=17%  Similarity=0.293  Sum_probs=60.2

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ...+.++|+.||+++        +|+|+.+||+++|+.+|.. ++++++.++..+|.|++|.|+|.||+..+
T Consensus        19 ~~~l~~~F~~~D~~~--------~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          19 YHAITQEFENFDTMK--------TNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHHHHHHHHHCTTC--------SSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCC--------CceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            467899999999999        9999999999999999999 99999999999999999999999999876

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=7e-12  Score=108.67  Aligned_cols=129  Identities=9%  Similarity=0.053  Sum_probs=86.9

Q ss_pred             HHHHHhh--cCCCCCCCcCHHHHHHHHHhcCCCC--CHHHHHHHHHhccCCCCCceeech------hhhchhHHHHHHhh
Q 048594          325 HKETFKQ--MDTNDSGTLTYDEFKAGLSKLGSTL--TEVDVKQYMQAADIDGNGTTLNLS------LVQCKDTSLKDFNI  394 (483)
Q Consensus       325 l~~~F~~--~D~d~~G~l~~~el~~~l~~~~~~~--~~~~~~~l~~~~d~~~~g~~~~~~------~~~~~~~~~~~F~~  394 (483)
                      ++++|.+  +|.|++|.||.+||..+++..+..+  +.+.+..++...|.+++|.+....      .+...+++..+|+.
T Consensus         7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~r~ei~~~F~~   86 (170)
T d2zkmx1           7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCPRPEIDEIFTS   86 (170)
T ss_dssp             HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSCCHHHHTTCC-
T ss_pred             HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCCHHHHHHHHHH
Confidence            4555555  7999999999999999998664332  334566678888888888743332      22346778999999


Q ss_pred             cCCCCccchhccccccccHHHHHHHHhhCCC----------C-ChHHHHHHHHHHcCCC----CCcccHHHHHHHHHcCC
Q 048594          395 FTKPSNILIRIMISIYITADELEAAFKEYNM----------G-DDATIKEIMFEVDRDK----DGRISYEEFCATMKTGT  459 (483)
Q Consensus       395 ~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~----------~-~~~~~~~~~~~~d~~~----~g~i~~~ef~~~~~~~~  459 (483)
                      ||.++        +|+||.+||..+|+...-          . +.+.+.+++..++.+.    +|.|++++|+.+|.+..
T Consensus        87 ~d~d~--------~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S~e  158 (170)
T d2zkmx1          87 YHAKA--------KPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGPE  158 (170)
T ss_dssp             ---------------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHSTT
T ss_pred             HcCCC--------CCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHHHcCcc
Confidence            99999        899999999999987532          1 5677889999887754    48999999999997776


Q ss_pred             CC
Q 048594          460 HL  461 (483)
Q Consensus       460 ~~  461 (483)
                      ++
T Consensus       159 n~  160 (170)
T d2zkmx1         159 NS  160 (170)
T ss_dssp             SC
T ss_pred             CC
Confidence            53

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=5.3e-10  Score=95.90  Aligned_cols=91  Identities=19%  Similarity=0.303  Sum_probs=67.1

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccc
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNIL  402 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~  402 (483)
                      ..++++|+.+|+|++|+|+.+||+.+++.+|..+++++++.++..+|.                                
T Consensus        70 ~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~--------------------------------  117 (165)
T d1k94a_          70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--------------------------------  117 (165)
T ss_dssp             HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCB--------------------------------
T ss_pred             chhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCC--------------------------------
Confidence            467889999999999999999999999999999998888777766642                                


Q ss_pred             hhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcc--cHHHHHHHH
Q 048594          403 IRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRI--SYEEFCATM  455 (483)
Q Consensus       403 ~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i--~~~ef~~~~  455 (483)
                           +|.|+.+|+.+++..+     +.+.+.++.+|.+++|.|  +|+||+.++
T Consensus       118 -----~g~i~~~eFi~~~~~l-----~~~~~~F~~~D~d~~G~i~l~~~ef~~~~  162 (165)
T d1k94a_         118 -----NGRIFFDDYVACCVKL-----RALTDFFRKRDHLQQGSANFIYDDFLQGT  162 (165)
T ss_dssp             -----TTBCBHHHHHHHHHHH-----HHHHHHHHTTCTTCCSEEEEEHHHHHHHH
T ss_pred             -----CCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEecHHHHHHHH
Confidence                 3456666666655432     344556666777777755  567777654

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.03  E-value=1.8e-10  Score=85.53  Aligned_cols=61  Identities=31%  Similarity=0.574  Sum_probs=54.5

Q ss_pred             hccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          315 ENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       315 ~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ..++++++.+++++|..+|.|++|+|+.+||..+|+.+|..+++.++..++..+|.+++|.
T Consensus         2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~   62 (77)
T d1f54a_           2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ   62 (77)
T ss_dssp             CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCe
Confidence            4678999999999999999999999999999999999999999988888877777665554

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.02  E-value=2.4e-10  Score=85.60  Aligned_cols=57  Identities=32%  Similarity=0.600  Sum_probs=47.1

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      +++++..++++|+.+|.|++|+|+..||..+|+.+| .+++.++..+|..+|.|++|.
T Consensus         1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~   57 (81)
T d2opoa1           1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGF   57 (81)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSE
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCe
Confidence            467889999999999999999999999999999998 577777766666655544443

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.01  E-value=3.5e-10  Score=84.81  Aligned_cols=64  Identities=25%  Similarity=0.417  Sum_probs=56.5

Q ss_pred             HhhhccchHHHhhHHHHHhhcCCCC-CCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          312 VIVENLPAEEIQKHKETFKQMDTND-SGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       312 ~i~~~~~~~~~~~l~~~F~~~D~d~-~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ..+..++++++..++++|+.+|+|+ +|+|+..||..+|+.+|.++++.++++++..+|.+++|.
T Consensus         4 ~~~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~   68 (82)
T d1wrka1           4 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT   68 (82)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSS
T ss_pred             HHHhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCe
Confidence            3456789999999999999999995 799999999999999999999998888888877666655

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.01  E-value=8.3e-11  Score=87.41  Aligned_cols=67  Identities=19%  Similarity=0.369  Sum_probs=57.9

Q ss_pred             chhHHHHHHhhcCC-CCccchhccccccccHHHHHHHHhhC--CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFTK-PSNILIRIMISIYITADELEAAFKEY--NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d~-~~~~~~~~~~~g~i~~~el~~~~~~~--~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..++++.+|..||. +++       +|+|+.+||+++++.+  +.. +++++++++.++|.|+||.|+|+||+.+|..
T Consensus         5 ~~~~l~~~F~~y~~~d~~-------~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~   75 (78)
T d1cb1a_           5 SPAELKSIFEKYAAKEGD-------PNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK   75 (78)
T ss_dssp             CHHHHHHHHHHHHTTSSS-------TTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHccCCCC-------CCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            45789999999975 442       6999999999999997  444 6778999999999999999999999999864

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=99.00  E-value=7.9e-10  Score=96.97  Aligned_cols=113  Identities=16%  Similarity=0.194  Sum_probs=88.4

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh--------hchhHHHHHHhhc
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV--------QCKDTSLKDFNIF  395 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~--------~~~~~~~~~F~~~  395 (483)
                      .+..++..+|.|++|.|+.+||..+...+      ..+..+|+.+|.|++|++......        ....++.++|..+
T Consensus        62 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~~~~~~~~~  135 (186)
T d1df0a1          62 TCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVAR  135 (186)
T ss_dssp             HHHHHHHHHCCSSSSEECHHHHHHHHHHH------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHhH------HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence            46677888888899999999988777643      567888888898888873222111        1134566778889


Q ss_pred             CCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcc--cHHHHHHHH
Q 048594          396 TKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRI--SYEEFCATM  455 (483)
Q Consensus       396 d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i--~~~ef~~~~  455 (483)
                      |.|+        +|.|+.+|+.+++..+     +.+..+++.+|.|++|.|  +|+||+.+.
T Consensus       136 d~d~--------dg~I~f~eFi~~~~~l-----~~~~~~F~~~D~~~~G~i~l~~~ef~~~~  184 (186)
T d1df0a1         136 FADD--------ELIIDFDNFVRCLVRL-----EILFKIFKQLDPENTGTIQLDLISWLSFS  184 (186)
T ss_dssp             HCCS--------TTEECHHHHHHHHHHH-----HHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred             HcCC--------CCeEeHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEecHHHHHHHh
Confidence            9999        9999999999988654     678889999999999987  899999874

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=99.00  E-value=3.5e-10  Score=86.85  Aligned_cols=67  Identities=18%  Similarity=0.442  Sum_probs=57.2

Q ss_pred             hhHHHHHHhhc-CCCCccchhccccccccHHHHHHHHhhC-----CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIF-TKPSNILIRIMISIYITADELEAAFKEY-----NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~-d~~~~~~~~~~~~g~i~~~el~~~~~~~-----~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+.+..+|..| |+||+       .|+|+.+||+++|+..     +.. +++++.++|.++|.|+||.|+|+||+.+|..
T Consensus         8 i~~l~~~F~~ya~~dg~-------~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~   80 (93)
T d3c1va1           8 LDVMVSTFHKYSGKEGD-------KFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   80 (93)
T ss_dssp             HHHHHHHHHHHHTSSSS-------TTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCC-------CCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Confidence            46788999998 67773       4689999999999874     344 8899999999999999999999999999865


Q ss_pred             C
Q 048594          458 G  458 (483)
Q Consensus       458 ~  458 (483)
                      -
T Consensus        81 l   81 (93)
T d3c1va1          81 I   81 (93)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.99  E-value=1.4e-09  Score=94.86  Aligned_cols=92  Identities=24%  Similarity=0.394  Sum_probs=64.4

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccch
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILI  403 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~~  403 (483)
                      .++.+|..+|.+++|+|+.+||+.++...+..+++                           +.+..+++.+|.++    
T Consensus        87 ~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~---------------------------e~~~~~~~~~d~~~----  135 (181)
T d1hqva_          87 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSD---------------------------QFHDILIRKFDRQG----  135 (181)
T ss_dssp             HHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCH---------------------------HHHHHHHHHHCSSC----
T ss_pred             ccccccccccccccchhhhHHHHHHHHHcCCcchh---------------------------HHHHHHHHHhCCCC----
Confidence            44555555555555555555555555555444444                           44555666777888    


Q ss_pred             hccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcc--cHHHHHHHH
Q 048594          404 RIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRI--SYEEFCATM  455 (483)
Q Consensus       404 ~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i--~~~ef~~~~  455 (483)
                          +|+|+.+|+..++..+     +.+..+++.+|.++||.|  +|+||+.+|
T Consensus       136 ----dg~Is~~eF~~~~~~l-----~~l~~~F~~~D~~~dG~i~~~~~ef~~~~  180 (181)
T d1hqva_         136 ----RGQIAFDDFIQGCIVL-----QRLTDIFRRYDTDQDGWIQVSYEQYLSMV  180 (181)
T ss_dssp             ----SSCBCHHHHHHHHHHH-----HHHHHHHHHHCTTCSSCCCCCHHHHHHHH
T ss_pred             ----CCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCCEEecHHHHHHHh
Confidence                8999999998887643     467888999999999965  799999886

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=98.99  E-value=2.8e-10  Score=88.29  Aligned_cols=66  Identities=15%  Similarity=0.266  Sum_probs=56.6

Q ss_pred             hhHHHHHHhhc-CCCCccchhccccccccHHHHHHHHhhCCC--C-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIF-TKPSNILIRIMISIYITADELEAAFKEYNM--G-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~-d~~~~~~~~~~~~g~i~~~el~~~~~~~~~--~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+.+..+|..| |++|+       +|+|+.+||+++++..+.  . ++++++++|.++|.|+||.|+|+||+.+|..
T Consensus        13 i~~l~~vF~~y~d~dg~-------~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~   82 (98)
T d1yuta1          13 IETVVTTFFTFARQEGR-------KDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE   82 (98)
T ss_dssp             HHHHHHHHHHHHTTSSS-------SSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCC-------CCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            45778899888 78883       599999999999998643  2 6678999999999999999999999999854

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.97  E-value=4.7e-10  Score=83.98  Aligned_cols=60  Identities=27%  Similarity=0.460  Sum_probs=53.4

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      .++++++.+++++|..+|.|++|+|+..||..+++.+|.++++.++++++..+|.+++|.
T Consensus         7 ~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~   66 (81)
T d1avsa_           7 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT   66 (81)
T ss_dssp             HBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSS
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCe
Confidence            468899999999999999999999999999999999999999988888777777666654

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=4.3e-10  Score=87.00  Aligned_cols=62  Identities=15%  Similarity=0.185  Sum_probs=57.4

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..++++|+.+|+|+        +|+|+.+|++.+|...|+ +++++..++..+|.|+||.|+|+||+.+|+
T Consensus        10 ~~~~~~F~~~D~d~--------~G~is~~e~~~~l~~~~l-~~~~l~~i~~~~D~d~dG~l~~~EF~~am~   71 (95)
T d1c07a_          10 AKYDEIFLKTDKDM--------DGFVSGLEVREIFLKTGL-PSTLLAHIWSLCDTKDCGKLSKDQFALAFH   71 (95)
T ss_dssp             HHHHHHHHHHCTTC--------SSEECHHHHHHHHHTTTC-CHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred             HHHHHHHHHHCCCC--------CCCCcHHHHHHHHHhcCC-CHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            46788999999999        999999999999999887 688999999999999999999999998764

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.95  E-value=2.3e-09  Score=92.75  Aligned_cols=113  Identities=16%  Similarity=0.218  Sum_probs=84.9

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhh--------hchhHHHHHHhhc
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLV--------QCKDTSLKDFNIF  395 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~--------~~~~~~~~~F~~~  395 (483)
                      ....++..+|.|++|.|+.+|+..+...+      ..+..+|+.+|.+++|.+......        ...+...+.|..+
T Consensus        48 ~~~~l~~~~d~d~~g~i~~~ef~~~~~~~------~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~~~  121 (173)
T d1alva_          48 TCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRR  121 (173)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCCcccchhhhhhhhhh------hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHHhhcc
Confidence            45667788888888888888887777643      456778888888888873222111        1123455667778


Q ss_pred             CCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcc--cHHHHHHHH
Q 048594          396 TKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRI--SYEEFCATM  455 (483)
Q Consensus       396 d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i--~~~ef~~~~  455 (483)
                      |.|+        +|.|+.+|+.+++..+     +.+..+++.+|.|++|.|  +|+||+.+.
T Consensus       122 d~d~--------~G~i~~~EF~~~~~~~-----~~~~~~f~~~D~d~~G~it~~~~efl~~~  170 (173)
T d1alva_         122 YSDE--------GGNMDFDNFISCLVRL-----DAMFRAFKSLDKDGTGQIQVNIQEWLQLT  170 (173)
T ss_dssp             HTCS--------SSCBCHHHHHHHHHHH-----HHHHHHHHHHSSSCCSEEEEEHHHHHHHH
T ss_pred             ccCC--------CCeEeHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEecHHHHHHHH
Confidence            8899        9999999999988653     577889999999999988  699999875

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=98.95  E-value=1.3e-10  Score=88.28  Aligned_cols=69  Identities=49%  Similarity=0.699  Sum_probs=60.8

Q ss_pred             HHhhhccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeec
Q 048594          311 KVIVENLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNL  379 (483)
Q Consensus       311 ~~i~~~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~  379 (483)
                      ..++..++.+++..++++|+.+|+|++|+|+..||..+++.+|..+++++++++++.+|.+++|.+...
T Consensus        11 ~~ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~   79 (87)
T d1s6ja_          11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYG   79 (87)
T ss_dssp             HHSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHH
T ss_pred             HHHHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHH
Confidence            345677888999999999999999999999999999999999999999999999988888888764333

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=98.95  E-value=4.5e-10  Score=86.51  Aligned_cols=67  Identities=21%  Similarity=0.405  Sum_probs=57.8

Q ss_pred             chhHHHHHHhhc-CCCCccchhccccccccHHHHHHHHhhCC-----CC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          384 CKDTSLKDFNIF-TKPSNILIRIMISIYITADELEAAFKEYN-----MG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       384 ~~~~~~~~F~~~-d~~~~~~~~~~~~g~i~~~el~~~~~~~~-----~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+.+..+|..| |+||+       +|+|+.+||+++|+.++     .. +++++..+|..+|.|+||.|+|+||+.+|.
T Consensus         7 ~i~~l~~~F~~y~d~dg~-------~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~   79 (93)
T d1zfsa1           7 AMETLINVFHAHSGKEGD-------KYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVA   79 (93)
T ss_dssp             HHHHHHHHHHHHGGGSSC-------CSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCCC-------CCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHH
Confidence            346788999988 88883       59999999999998864     23 688999999999999999999999999885


Q ss_pred             c
Q 048594          457 T  457 (483)
Q Consensus       457 ~  457 (483)
                      .
T Consensus        80 ~   80 (93)
T d1zfsa1          80 A   80 (93)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=98.95  E-value=3.9e-10  Score=82.69  Aligned_cols=60  Identities=35%  Similarity=0.600  Sum_probs=52.5

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      +++++++.+++++|+.+|.|++|+|+..||..+++.+|..++++++..++..+|.+++|.
T Consensus         1 qLs~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~   60 (73)
T d2pq3a1           1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT   60 (73)
T ss_dssp             CCCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSE
T ss_pred             CcCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCe
Confidence            367899999999999999999999999999999999999999987777777766655554

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=98.92  E-value=8.8e-10  Score=84.33  Aligned_cols=67  Identities=12%  Similarity=0.222  Sum_probs=57.6

Q ss_pred             chhHHHHHHhhc-CCCCccchhccccc-cccHHHHHHHHhhC-----CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          384 CKDTSLKDFNIF-TKPSNILIRIMISI-YITADELEAAFKEY-----NMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       384 ~~~~~~~~F~~~-d~~~~~~~~~~~~g-~i~~~el~~~~~~~-----~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ..+.+..+|..| |++|        +| +|+.+||+++++..     +.. ++++++++|.++|.|+||.|+|+||+.+|
T Consensus         7 ~i~~i~~vF~kya~~dG--------d~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~   78 (93)
T d1ksoa_           7 AVAAIVCTFQEYAGRCG--------DKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSL   78 (93)
T ss_dssp             HHHHHHHHHHHHHTSSS--------CTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCcCC--------CCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHH
Confidence            346678899988 9999        88 59999999999874     333 68899999999999999999999999998


Q ss_pred             HcC
Q 048594          456 KTG  458 (483)
Q Consensus       456 ~~~  458 (483)
                      ..-
T Consensus        79 ~~l   81 (93)
T d1ksoa_          79 ACL   81 (93)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.91  E-value=9.9e-10  Score=84.36  Aligned_cols=62  Identities=21%  Similarity=0.361  Sum_probs=57.1

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..++++|+.+|+++        +|+|+.+|++.+|+..|+ +.+++..|+..+|.|+||.|+|+||+.+|+
T Consensus         9 ~~y~~~F~~~D~d~--------~G~i~~~e~~~~l~~~~l-~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~   70 (92)
T d1fi6a_           9 QYYVNQFKTIQPDL--------NGFIPGSAAKEFFTKSKL-PILELSHIWELSDFDKDGALTLDEFCAAFH   70 (92)
T ss_dssp             HHHHHHHTTTCCST--------TCEEEHHHHHHHHHHHSS-CHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCc--------ccchhHHHHHHHHHHccC-CHHHHHHHHHHhCCCCCCeecHHHHHHHHH
Confidence            46788999999999        999999999999999988 688999999999999999999999987654

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3.8e-09  Score=91.25  Aligned_cols=113  Identities=19%  Similarity=0.237  Sum_probs=82.0

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeech---------hhhchhHHHHHHh
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLS---------LVQCKDTSLKDFN  393 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~---------~~~~~~~~~~~F~  393 (483)
                      ..++.++..+|.|++|.|+.+|+..++...      ......|+.+|.+++|.+....         ...+.+.+..+|+
T Consensus        47 ~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~  120 (172)
T d1juoa_          47 ETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK  120 (172)
T ss_dssp             HHHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCceehHHHHHHHHhh------hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            345667777888888888888887776643      4466778888888887632211         1123566777888


Q ss_pred             hcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcc--cHHHHHHHHH
Q 048594          394 IFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRI--SYEEFCATMK  456 (483)
Q Consensus       394 ~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i--~~~ef~~~~~  456 (483)
                      .+|.          +|.|+.+++.+++..+     +.+.++++.+|.|++|.|  +|+||+.++.
T Consensus       121 ~~d~----------~g~i~~~eF~~~~~~~-----~~~~~~f~~~D~d~~G~Itl~~~eFl~~~l  170 (172)
T d1juoa_         121 RYST----------NGKITFDDYIACCVKL-----RALTDSFRRRDTAQQGVVNFPYDDFIQCVM  170 (172)
T ss_dssp             HTCS----------SSSEEHHHHHHHHHHH-----HHHHHHHHHTCTTCCSEEEEEHHHHHHHHT
T ss_pred             HHHh----------cCCcCHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence            8864          5669999998888764     467788999999999987  8899998764

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.88  E-value=2e-09  Score=77.32  Aligned_cols=64  Identities=22%  Similarity=0.427  Sum_probs=51.4

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccch
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILI  403 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~~  403 (483)
                      .++++|+.+|.|++|+|+..||+.+++.+|..+++++++.+|..                           +|.++    
T Consensus         2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~---------------------------~D~d~----   50 (67)
T d1tiza_           2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEE---------------------------IDVDG----   50 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHH---------------------------HCCSS----
T ss_pred             hHHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHH---------------------------hCCCC----
Confidence            46889999999999999999999999999998888666655544                           55666    


Q ss_pred             hccccccccHHHHHHHHhh
Q 048594          404 RIMISIYITADELEAAFKE  422 (483)
Q Consensus       404 ~~~~~g~i~~~el~~~~~~  422 (483)
                          +|.|+.+|+..++.+
T Consensus        51 ----dg~I~~~EF~~~m~~   65 (67)
T d1tiza_          51 ----NGELNADEFTSCIEK   65 (67)
T ss_dssp             ----SSEECHHHHHHHHHT
T ss_pred             ----CCeEeHHHHHHHHHH
Confidence                677777777776654

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=98.88  E-value=9.1e-10  Score=83.52  Aligned_cols=67  Identities=18%  Similarity=0.345  Sum_probs=58.2

Q ss_pred             chhHHHHHHhhc-CCCCccchhccccc-cccHHHHHHHHhh---CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIF-TKPSNILIRIMISI-YITADELEAAFKE---YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~-d~~~~~~~~~~~~g-~i~~~el~~~~~~---~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ....+..+|..| |++|        +| .|+..||+.+++.   .+.. ++++++++|+++|.|+||.|+|+||+.+|..
T Consensus         7 ai~~ii~vF~kya~~dg--------~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~   78 (89)
T d1k8ua_           7 AIGLLVAIFHKYSGREG--------DKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA   78 (89)
T ss_dssp             HHHHHHHHHHHHHTSSS--------CTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCC--------CCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            346678899888 9999        77 6999999999987   4555 7889999999999999999999999999864


Q ss_pred             C
Q 048594          458 G  458 (483)
Q Consensus       458 ~  458 (483)
                      -
T Consensus        79 l   79 (89)
T d1k8ua_          79 L   79 (89)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=98.86  E-value=6.9e-10  Score=85.00  Aligned_cols=65  Identities=20%  Similarity=0.444  Sum_probs=55.8

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC-----CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY-----NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~-----~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+.+..+|..||. +        +|+|+.+||+++++..     +.. +++.++++|..+|.|+||.|+|+||+.+|..
T Consensus         7 ~ie~l~~~F~~yd~-d--------dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~   77 (92)
T d1a4pa_           7 AMETMMFTFHKFAG-D--------KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG   77 (92)
T ss_dssp             HHHHHHHHHHHHHG-G--------GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcC-C--------CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH
Confidence            35678999999995 3        5999999999999874     223 6788999999999999999999999998854

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=98.85  E-value=9.9e-10  Score=83.05  Aligned_cols=65  Identities=12%  Similarity=0.225  Sum_probs=56.2

Q ss_pred             hhHHHHHHhhc-CCCCccchhcccccc-ccHHHHHHHHhh-CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIF-TKPSNILIRIMISIY-ITADELEAAFKE-YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~-d~~~~~~~~~~~~g~-i~~~el~~~~~~-~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+.+..+|+.| |++|        +|. ++.+||++++.. +|.. +++++++++.++|.|+||.|+|+||+.+|..
T Consensus         9 i~~ii~~F~kya~~dG--------~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~   77 (87)
T d1xk4a1           9 LNSIIDVYHKYSLIKG--------NFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK   77 (87)
T ss_dssp             HHHHHHHHHHHHTSSS--------CTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCC--------CCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            35678888888 8999        776 589999999976 6655 7788999999999999999999999999865

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.83  E-value=2.2e-09  Score=75.54  Aligned_cols=53  Identities=23%  Similarity=0.541  Sum_probs=49.4

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCce
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT  376 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~  376 (483)
                      +++++|..+|++++|+|+.+||+.+++.+|.++++.++..+++.+|.+++|.+
T Consensus         2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I   54 (61)
T d2fcea1           2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEI   54 (61)
T ss_dssp             HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEE
T ss_pred             hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcE
Confidence            68899999999999999999999999999999999999999999888888864

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.83  E-value=2.7e-09  Score=76.11  Aligned_cols=54  Identities=30%  Similarity=0.634  Sum_probs=48.8

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCce
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTT  376 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~  376 (483)
                      ++++++|+.+|+|++|+|+.+||+.+++.+|..+++.+++.++..+|.|++|.+
T Consensus         3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I   56 (65)
T d1fw4a_           3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV   56 (65)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSE
T ss_pred             HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcE
Confidence            368999999999999999999999999999999999999888888887777763

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1.6e-09  Score=84.50  Aligned_cols=64  Identities=23%  Similarity=0.229  Sum_probs=53.9

Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-----------------ChHHHHHHHHHHcCCCCCcccHH
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-----------------DDATIKEIMFEVDRDKDGRISYE  449 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-----------------~~~~~~~~~~~~d~~~~g~i~~~  449 (483)
                      .++.+|+.||.||        +|+|+.+||..+++.++..                 ....++.+|..+|.|+||.|||+
T Consensus        17 ~~r~~F~~~D~Dg--------dG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~   88 (99)
T d1snla_          17 NPKTFFILHDINS--------DGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLE   88 (99)
T ss_dssp             CHHHHHHHHCSSC--------CSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHH
T ss_pred             CHHHHHHHHCCCC--------CCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHH
Confidence            4788999999999        9999999999999764210                 13357789999999999999999


Q ss_pred             HHHHHHHcC
Q 048594          450 EFCATMKTG  458 (483)
Q Consensus       450 ef~~~~~~~  458 (483)
                      ||+..+++.
T Consensus        89 EF~~~~~~~   97 (99)
T d1snla_          89 EFLASTQRK   97 (99)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999998754

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.82  E-value=4.9e-09  Score=77.01  Aligned_cols=52  Identities=23%  Similarity=0.452  Sum_probs=44.8

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCC
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNG  374 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g  374 (483)
                      ..++++|+.||+|++|+|+..||+.+|+.+|..+++++++.++..+|.+++|
T Consensus         9 eel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg   60 (75)
T d1jc2a_           9 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDG   60 (75)
T ss_dssp             HHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCS
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCC
Confidence            3689999999999999999999999999999999998887777666554444

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=98.81  E-value=1.2e-08  Score=88.82  Aligned_cols=93  Identities=18%  Similarity=0.310  Sum_probs=67.4

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCcc
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNI  401 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~  401 (483)
                      ...+++.|..+|.+++|+|+.+||..++..+|..+++++                           +..+|+.+|.++  
T Consensus        83 ~~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e---------------------------~~~i~~~~d~~~--  133 (182)
T d1y1xa_          83 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQT---------------------------FQALMRKFDRQR--  133 (182)
T ss_dssp             HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHH---------------------------HHHHHHHHCTTC--
T ss_pred             ccccccchhccccccchhhhhHHHHHHHHHhCCchhHHH---------------------------HHHHHhhcccCC--
Confidence            345666777777777777777777777777666665544                           444566777777  


Q ss_pred             chhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcc--cHHHHHHH
Q 048594          402 LIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRI--SYEEFCAT  454 (483)
Q Consensus       402 ~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i--~~~ef~~~  454 (483)
                            +|.|+.+|+.+++..+     ..+.++++.+|.+++|.|  +|++|+.-
T Consensus       134 ------dg~I~~~eF~~~~~~l-----~~~~~~F~~~D~~~~G~is~~~~~f~~~  177 (182)
T d1y1xa_         134 ------RGSLGFDDYVELSIFV-----CRVRNVFAFYDRERTGQVTFTFDTFIGG  177 (182)
T ss_dssp             ------SSSBCHHHHHHHHHHH-----HHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred             ------CCCcCHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEeeHHHHHHH
Confidence                  7888888888887653     356778888999999985  68898763

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=98.80  E-value=5.9e-09  Score=78.38  Aligned_cols=67  Identities=18%  Similarity=0.306  Sum_probs=55.4

Q ss_pred             chhHHHHHHhhc-CCCCccchhccccccccHHHHHHHHhhC-----CCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          384 CKDTSLKDFNIF-TKPSNILIRIMISIYITADELEAAFKEY-----NMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       384 ~~~~~~~~F~~~-d~~~~~~~~~~~~g~i~~~el~~~~~~~-----~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+.+..+|..| +++|+       .++|+.+||+++++..     +.. +++.++++|..+|.|+||.|+|+||+.++.
T Consensus         6 ai~~li~vF~kya~~~g~-------~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~   78 (87)
T d1e8aa_           6 HLEGIVNIFHQYSVRKGH-------FDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVA   78 (87)
T ss_dssp             HHHHHHHHHHHHHTSSSS-------TTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCCC-------CCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHH
Confidence            346788899988 55662       3579999999999873     333 689999999999999999999999999985


Q ss_pred             c
Q 048594          457 T  457 (483)
Q Consensus       457 ~  457 (483)
                      .
T Consensus        79 ~   79 (87)
T d1e8aa_          79 I   79 (87)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=5.9e-09  Score=80.28  Aligned_cols=61  Identities=16%  Similarity=0.283  Sum_probs=55.6

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..+.++|+.+| ++        +|+|+.+|++.+|...|+ +.+++..|+..+|.|+||.|+|+||+..|+
T Consensus        10 ~~y~~~F~~~D-~~--------~G~i~~~el~~~l~~~gl-~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~   70 (95)
T d2jxca1          10 AKYDAIFDSLS-PV--------NGFLSGDKVKPVLLNSKL-PVDILGRVWELSDIDHDGMLDRDEFAVAMF   70 (95)
T ss_dssp             HHHHHHHHHTC-CB--------TTEEEHHHHHHHHTTSSC-CHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHhC-CC--------CCceeHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence            45788999999 88        899999999999999988 678899999999999999999999987654

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=98.77  E-value=9.3e-09  Score=75.96  Aligned_cols=67  Identities=22%  Similarity=0.376  Sum_probs=54.3

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCcc
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNI  401 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~  401 (483)
                      .++++++|+.+|.|++|+|+.+||..+|+.+|.+++..+++.+|+.                           +|.|+  
T Consensus         8 ~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~---------------------------~D~d~--   58 (77)
T d1oqpa_           8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAE---------------------------ADRND--   58 (77)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHH---------------------------HCCSS--
T ss_pred             HHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHH---------------------------hCCCC--
Confidence            3578999999999999999999999999999999988766665555                           45666  


Q ss_pred             chhccccccccHHHHHHHHhhC
Q 048594          402 LIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       402 ~~~~~~~g~i~~~el~~~~~~~  423 (483)
                            +|.|+.+|+.+++++.
T Consensus        59 ------~G~I~~~EF~~~m~k~   74 (77)
T d1oqpa_          59 ------DNEIDEDEFIRIMKKT   74 (77)
T ss_dssp             ------SSEECHHHHHHHHHHT
T ss_pred             ------CCcEeHHHHHHHHHcc
Confidence                  6777777777776653

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.76  E-value=5.4e-09  Score=81.15  Aligned_cols=62  Identities=19%  Similarity=0.200  Sum_probs=57.7

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ....++|+.+|+++        +|+|+.+|++.+|+..|+ +++++..|+..+|.|+||.|+++||+..|+
T Consensus        11 ~~y~~~F~~~D~d~--------~G~i~~~e~~~~l~~s~L-~~~~L~~i~~~~D~d~dG~L~~~EF~~am~   72 (99)
T d1qjta_          11 PVYEKYYRQVEAGN--------TGRVLALDAAAFLKKSGL-PDLILGKIWDLADTDGKGVLSKQEFFVALR   72 (99)
T ss_dssp             THHHHHHHHHCCTT--------SSCCCSHHHHHHHHTSSS-CHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred             HHHHHHHHHHCCCC--------CCcccHHHHHHHHHHcCC-cHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence            45678999999999        999999999999999988 688999999999999999999999998875

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.75  E-value=1.1e-08  Score=89.67  Aligned_cols=90  Identities=21%  Similarity=0.266  Sum_probs=76.7

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh---------------------hh
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL---------------------VQ  383 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~---------------------~~  383 (483)
                      ...+|+.+|.+++|.|+..||..++..++....++.++.+|+.+|.|++|.+.....                     ..
T Consensus        65 ~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~  144 (190)
T d1fpwa_          65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEAT  144 (190)
T ss_dssp             HHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCC
T ss_pred             HHHHHHHhCcCCCCcccHHHHHHHHHHHccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhh
Confidence            467999999999999999999999999988888999999999999999998222111                     11


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhh
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE  422 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~  422 (483)
                      .++.+..+|+.+|.|+        +|+|+.+|+.+++..
T Consensus       145 ~~~~v~~if~~~D~d~--------dG~Is~~EF~~~~~~  175 (190)
T d1fpwa_         145 PEMRVKKIFKLMDKNE--------DGYITLDEFREGSKV  175 (190)
T ss_dssp             HHHHHHHHHHHHTTTC--------SSEEEHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHH
Confidence            1355788999999999        999999999999875

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=4.8e-09  Score=83.05  Aligned_cols=63  Identities=21%  Similarity=0.368  Sum_probs=57.4

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      .+.+.++|+.+|+++        +|+|+.+|++.+|.+.|+ +.+++..|+..+|.|++|.|+++||+.+|+
T Consensus        21 ~~~y~~lF~~~D~d~--------~G~Is~~e~~~~l~~s~L-~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~   83 (110)
T d1iq3a_          21 REYYVNQFRSLQPDP--------SSFISGSVAKNFFTKSKL-SIPELSYIWELSDADCDGALTLPEFCAAFH   83 (110)
T ss_dssp             HHHHHHHHHHHCCSS--------SSEEEHHHHHHHCCSSSC-SSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCc--------ccchhHHHHHHHHHhhcc-chHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence            456789999999999        999999999999999887 567899999999999999999999997764

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=98.72  E-value=7.7e-09  Score=77.17  Aligned_cols=51  Identities=27%  Similarity=0.512  Sum_probs=43.0

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCC
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN  373 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~  373 (483)
                      ..++++|..+|+|++|+|+..||..+++.+|.++++++++.++..+|.+++
T Consensus        15 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~d   65 (81)
T d1fi5a_          15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNND   65 (81)
T ss_dssp             HHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSS
T ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCC
Confidence            468899999999999999999999999999999998777766655554433

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=98.72  E-value=6e-09  Score=85.61  Aligned_cols=64  Identities=16%  Similarity=0.174  Sum_probs=54.5

Q ss_pred             HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCC
Q 048594          388 SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGT  459 (483)
Q Consensus       388 ~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~  459 (483)
                      .+.+|+.+|.|+        +|+|+.+||..+++.++.. ++++++.++..+|.+++|.|+|+||+.++....
T Consensus         2 ae~~F~~~D~d~--------dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~   66 (134)
T d1jfja_           2 AEALFKEIDVNG--------DGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQ   66 (134)
T ss_dssp             HHHHHHHHCTTC--------SSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSS
T ss_pred             HHHHHHHHcCCC--------cCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhccccccccccccccccccc
Confidence            357899999999        8999999999999988887 778888889999999999999999998886544

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=98.65  E-value=4e-08  Score=85.78  Aligned_cols=88  Identities=15%  Similarity=0.093  Sum_probs=70.7

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhh---chhHHHHHHhhcCC
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQ---CKDTSLKDFNIFTK  397 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~---~~~~~~~~F~~~d~  397 (483)
                      .+..++.+|+.+|+|++|+|+..||..+|..+|..++.+.++.++.. +.+++|.+....++.   ....+..+|+.+|+
T Consensus        91 ~~~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~-~~~~dg~i~f~eFi~~~~~l~~~~~~F~~~D~  169 (188)
T d1qxpa2          91 RIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR-FADDELIIDFDNFVRCLVRLEILFKIFKQLDP  169 (188)
T ss_dssp             HHHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH-TSCSSSBCCHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred             hhHHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHH-hcCCCCcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            34568889999999999999999999999999999998878777777 458899855444433   34567789999999


Q ss_pred             CCccchhccccccc--cHHHHH
Q 048594          398 PSNILIRIMISIYI--TADELE  417 (483)
Q Consensus       398 ~~~~~~~~~~~g~i--~~~el~  417 (483)
                      ++        +|+|  +.+++.
T Consensus       170 ~~--------~G~i~l~~~efl  183 (188)
T d1qxpa2         170 EN--------TGTIQLDLISWL  183 (188)
T ss_dssp             SC--------CSCEEEEHHHHH
T ss_pred             CC--------CCeEEeeHHHHH
Confidence            99        8987  455553

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.64  E-value=2.9e-08  Score=86.86  Aligned_cols=91  Identities=19%  Similarity=0.214  Sum_probs=75.9

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh----------------------
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL----------------------  381 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~----------------------  381 (483)
                      .++.+|+.+|.|++|.|+..||..++..+.....++.++.+|+.+|.|++|.+.....                      
T Consensus        59 ~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~  138 (189)
T d1jbaa_          59 YVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQ  138 (189)
T ss_dssp             HHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSST
T ss_pred             HHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhh
Confidence            4678999999999999999999999999877778888999999999999998221110                      


Q ss_pred             ----hhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhh
Q 048594          382 ----VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE  422 (483)
Q Consensus       382 ----~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~  422 (483)
                          ...++.+..+|+.+|.|+        +|+|+.+|+.++++.
T Consensus       139 ~~~~~~~e~~~~~if~~~D~d~--------dG~Is~~EF~~~~~~  175 (189)
T d1jbaa_         139 QGKLLTPEEVVDRIFLLVDENG--------DGQLSLNEFVEGARR  175 (189)
T ss_dssp             TTCCCCHHHHHHHHHHHHCCSC--------CSCBCHHHHHHHHTT
T ss_pred             hccccchHHHHHHHHHHhCCCC--------CCcEeHHHHHHHHHh
Confidence                111345678999999999        999999999999874

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.64  E-value=8.7e-09  Score=61.24  Aligned_cols=32  Identities=25%  Similarity=0.450  Sum_probs=30.2

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN  424 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~  424 (483)
                      +++++++|++||+||        +|+|+.+||+++|+.+|
T Consensus         2 eeel~eAF~~FDkDg--------~G~Is~~EL~~vm~~lG   33 (33)
T d2hf5a1           2 EEEIREAFRVFDKDG--------NGYISAAELRHVMTNLG   33 (33)
T ss_dssp             HHHHHHHHHHHSSSC--------CSCBCHHHHHHHTTSCC
T ss_pred             HHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHHcC
Confidence            578999999999999        99999999999999886

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.64  E-value=2.9e-08  Score=87.75  Aligned_cols=113  Identities=18%  Similarity=0.152  Sum_probs=91.1

Q ss_pred             CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhc-cCCCCCceeechhh----------hchhHHHHHHhhcCCCCccchh
Q 048594          336 DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAA-DIDGNGTTLNLSLV----------QCKDTSLKDFNIFTKPSNILIR  404 (483)
Q Consensus       336 ~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~-d~~~~g~~~~~~~~----------~~~~~~~~~F~~~d~~~~~~~~  404 (483)
                      .+|.|+.+++..+.+..  .+++.++..+++.+ +.+++|.+....+.          .....+..+|+.+|.++     
T Consensus         4 ~~~~l~~e~l~~l~~~t--~f~~~ei~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~-----   76 (201)
T d1omra_           4 KSGALSKEILEELQLNT--KFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANS-----   76 (201)
T ss_dssp             SSCTHHHHHHHHHGGGC--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCS-----
T ss_pred             ccCCCCHHHHHHHHHhC--CCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCC-----
Confidence            57899999998888865  47899999998886 66778874333221          12344578999999999     


Q ss_pred             ccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          405 IMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       405 ~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                         +|.|+..|+..++..+... .++.+..++..+|.|++|.|+++||..+++..
T Consensus        77 ---~G~I~f~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~  128 (201)
T d1omra_          77 ---DGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI  128 (201)
T ss_dssp             ---SSEEEHHHHHHHHHHHHSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             ---CCeEeehhHHHHHHhhcccchHHHHHHHHHHHccCCCCccCHHHHHHHHHHH
Confidence               9999999999999887555 67779999999999999999999999988653

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.63  E-value=1.5e-08  Score=84.72  Aligned_cols=81  Identities=16%  Similarity=0.316  Sum_probs=65.9

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCC--CCCcccHHHHHHHHHcCCCC
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRD--KDGRISYEEFCATMKTGTHL  461 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~  461 (483)
                      .++++++|+.||+++        +|+|+.+||..+|+.+|.. +.+++..++..++.+  ++|.|+|+||+.++......
T Consensus         3 ~eelke~F~~~D~d~--------~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~   74 (145)
T d2mysc_           3 ADDFKEAFLLFDRTG--------DAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANN   74 (145)
T ss_pred             HHHHHHHHHHHcCCC--------CCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhc
Confidence            478999999999999        9999999999999999988 889999999987665  68999999999998654322


Q ss_pred             -Cccccccccchh
Q 048594          462 -RGTSYRNLSHIF  473 (483)
Q Consensus       462 -~~~~~~~~~~~~  473 (483)
                       .....+.+.++|
T Consensus        75 ~~~~~~~~l~~aF   87 (145)
T d2mysc_          75 KDQGTFEDFVEGL   87 (145)
T ss_pred             cccchHHHHHHHH
Confidence             223344455555

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.63  E-value=1.2e-08  Score=79.34  Aligned_cols=64  Identities=17%  Similarity=0.221  Sum_probs=53.0

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCC--------CChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNM--------GDDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~--------~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+..+|..|| ++        +|+|+.+||+.+++..+.        .++..++.+|..+|.|+||.|+|+||+.+|..
T Consensus        10 ~~l~~~F~~y~-~~--------dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~   80 (100)
T d1psra_          10 IGMIDMFHKYT-RR--------DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD   80 (100)
T ss_dssp             HHHHHHHHHTC-CT--------TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHc-CC--------CCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            44566777776 67        799999999999998642        15667999999999999999999999998865


Q ss_pred             C
Q 048594          458 G  458 (483)
Q Consensus       458 ~  458 (483)
                      -
T Consensus        81 l   81 (100)
T d1psra_          81 I   81 (100)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=98.57  E-value=1.3e-08  Score=73.12  Aligned_cols=51  Identities=39%  Similarity=0.666  Sum_probs=40.9

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHhccCCCC
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGST-LTEVDVKQYMQAADIDGN  373 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~-~~~~~~~~l~~~~d~~~~  373 (483)
                      ++++++|+.+|.|++|+|+.+||..+++.+|.. ++.++++.++..+|.|++
T Consensus         2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~d   53 (68)
T d1c7va_           2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGN   53 (68)
T ss_dssp             HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGG
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCC
Confidence            368899999999999999999999999999875 677766666555544333

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=5.3e-08  Score=72.86  Aligned_cols=55  Identities=18%  Similarity=0.332  Sum_probs=48.8

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ....++++|..+|.+++|+|+.+||..+|..+|..+++++++.++..+|.+++|.
T Consensus        18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~   72 (83)
T d1wlza1          18 HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGR   72 (83)
T ss_dssp             THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSC
T ss_pred             HHHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCc
Confidence            3467899999999999999999999999999999999988888888877776665

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=98.49  E-value=2e-07  Score=70.07  Aligned_cols=67  Identities=16%  Similarity=0.330  Sum_probs=55.3

Q ss_pred             chhHHHHHHhhcC-CCCccchhccccccccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMISIYITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~g~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ....+..+|..|. ++|+       .++|+..||+.+++.     ++.. +++.++++|+.+|.|+||.|+|+||+.++.
T Consensus         7 ai~~ii~vFhkYa~~~G~-------~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~   79 (90)
T d3cr5x1           7 AVVALIDVFHQYSGREGD-------KHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVA   79 (90)
T ss_dssp             HHHHHHHHHHHHHTSSSS-------TTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCC-------cCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence            3456788999984 5663       468999999999987     3444 678899999999999999999999999875


Q ss_pred             c
Q 048594          457 T  457 (483)
Q Consensus       457 ~  457 (483)
                      .
T Consensus        80 ~   80 (90)
T d3cr5x1          80 M   80 (90)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=98.48  E-value=1.3e-07  Score=78.79  Aligned_cols=60  Identities=28%  Similarity=0.492  Sum_probs=28.9

Q ss_pred             HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          388 SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       388 ~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ++++|..+|+++        +|+|+.+||..++..+|.. ++..+..++..+|.+++|.|+|+||+..+
T Consensus        11 l~~~F~~~D~~~--------~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~   71 (146)
T d1exra_          11 FKEAFALFDKDG--------DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLM   71 (146)
T ss_dssp             HHHHHHHHCTTC--------SSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred             HHHHHHHHcCCC--------CCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHH
Confidence            444444455444        4555555554444444444 44444444444444444444444444443

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=1.2e-07  Score=82.66  Aligned_cols=90  Identities=18%  Similarity=0.225  Sum_probs=73.3

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeech---------------------hhh
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLS---------------------LVQ  383 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~---------------------~~~  383 (483)
                      ...+|+.+|.+++|.|+.+||..++..+.....++.++.+|+.+|.|++|.+....                     ...
T Consensus        62 ~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~  141 (187)
T d1g8ia_          62 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENT  141 (187)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSS
T ss_pred             HHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhcc
Confidence            45689999999999999999999999886556677799999999999999832221                     011


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhh
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE  422 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~  422 (483)
                      .++.+..+|+.+|.|+        +|+|+.+|+.+++..
T Consensus       142 ~~~~v~~if~~~D~d~--------dG~Is~~EF~~~~~~  172 (187)
T d1g8ia_         142 PEKRVDRIFAMMDKNA--------DGKLTLQEFQEGSKA  172 (187)
T ss_dssp             HHHHHHHHHHHHCSSC--------SSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCC--------CCcEeHHHHHHHHHH
Confidence            2355788999999999        999999999998875

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.45  E-value=8.3e-08  Score=75.58  Aligned_cols=68  Identities=26%  Similarity=0.299  Sum_probs=51.1

Q ss_pred             hHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcC---CCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhc
Q 048594          319 AEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLG---STLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIF  395 (483)
Q Consensus       319 ~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~---~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~  395 (483)
                      ......++++|+.+|.|++|+|+.+||+.+++.++   ..+++++                           +..+|+.+
T Consensus        37 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~---------------------------~~~~~~~~   89 (108)
T d1rroa_          37 KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESE---------------------------TKSLMDAA   89 (108)
T ss_dssp             GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHH---------------------------HHHHHHHH
T ss_pred             cCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHH---------------------------HHHHHHHh
Confidence            34445788999999999999999999999999874   3344544                           44556666


Q ss_pred             CCCCccchhccccccccHHHHHHHHh
Q 048594          396 TKPSNILIRIMISIYITADELEAAFK  421 (483)
Q Consensus       396 d~~~~~~~~~~~~g~i~~~el~~~~~  421 (483)
                      |.|+        +|.|+.+|+..+++
T Consensus        90 D~d~--------dG~I~~~EF~~~m~  107 (108)
T d1rroa_          90 DNDG--------DGKIGADEFQEMVH  107 (108)
T ss_dssp             CCSS--------SSSEEHHHHHHHHT
T ss_pred             CCCC--------CCeEeHHHHHHHHc
Confidence            6777        77778777777664

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.44  E-value=3.9e-08  Score=82.75  Aligned_cols=79  Identities=11%  Similarity=0.164  Sum_probs=48.6

Q ss_pred             hHHHHHHhhcCC--CCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCCCC
Q 048594          386 DTSLKDFNIFTK--PSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLR  462 (483)
Q Consensus       386 ~~~~~~F~~~d~--~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~  462 (483)
                      .+++++|..||.  ++        +|+|+.+||+.+|+.+|.. +++++..+ ...+.+++|.|+|+||+.++.......
T Consensus         7 ~~l~~~F~~fD~~~~~--------dG~I~~~el~~~l~~lG~~~t~~e~~~~-~~~~~~~~~~i~~~eFl~~~~~~~~~~   77 (152)
T d1wdcc_           7 DDLKDVFELFDFWDGR--------DGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCE   77 (152)
T ss_dssp             HHHHHHHHHHHHHTCS--------SSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHCcCCCC--------CCeECHHHHHHHHHHhccCccHhhhhhh-hhhhccccccccccccccccccccccc
Confidence            345667777773  55        6777777777777777766 66666554 344566677777777777665444333


Q ss_pred             ccccccccchh
Q 048594          463 GTSYRNLSHIF  473 (483)
Q Consensus       463 ~~~~~~~~~~~  473 (483)
                      +.+...+.++|
T Consensus        78 ~~~~~~l~~aF   88 (152)
T d1wdcc_          78 QGTFADYMEAF   88 (152)
T ss_dssp             CCCHHHHHHHH
T ss_pred             hhHHHhhhhhh
Confidence            44444455554

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=98.44  E-value=1e-07  Score=75.06  Aligned_cols=52  Identities=31%  Similarity=0.534  Sum_probs=41.2

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhc---CCCCCHHHHHHHHHhccCCCCC
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKL---GSTLTEVDVKQYMQAADIDGNG  374 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~---~~~~~~~~~~~l~~~~d~~~~g  374 (483)
                      ..++++|+.+|+|++|+|+.+||+.+++.+   |..+++++++++++.+|.|++|
T Consensus        41 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~~~~~D~d~dG   95 (109)
T d5pala_          41 AQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDG   95 (109)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSS
T ss_pred             HHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHHHHHHhCCCCCC
Confidence            478999999999999999999999999886   5667777666666555544443

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=1.6e-07  Score=71.99  Aligned_cols=57  Identities=21%  Similarity=0.229  Sum_probs=44.4

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ++.++...++++|+.+|+|++|+|+.+|+..++...+  ++.+++.++++.+|.|++|.
T Consensus         4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~   60 (95)
T d1c07a_           4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGK   60 (95)
T ss_dssp             SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSS
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcC--CCHHHHHHHHHHhCCCCCCe
Confidence            5678888999999999999999999999999999875  45655555555555444444

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=8.3e-08  Score=74.39  Aligned_cols=79  Identities=16%  Similarity=0.074  Sum_probs=56.5

Q ss_pred             hHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc-eeechhhhchhHHHHHHhhcCCCCccc
Q 048594          324 KHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT-TLNLSLVQCKDTSLKDFNIFTKPSNIL  402 (483)
Q Consensus       324 ~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~-~~~~~~~~~~~~~~~~F~~~d~~~~~~  402 (483)
                      .++.+|+.+|.|++|+|+.+||..+++.++..+            ....... ............+..+|+.+|.|+   
T Consensus        17 ~~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~---   81 (99)
T d1snla_          17 NPKTFFILHDINSDGVLDEQELEALFTKELEKV------------YDPKNEEDDMREMEEERLRMREHVMKNVDTNQ---   81 (99)
T ss_dssp             CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTT------------SCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSC---
T ss_pred             CHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhc------------chhhhhhhhhhhhHHHHHHHHHHHHHHcCCCC---
Confidence            368899999999999999999999998653211            1111110 001111223456788999999999   


Q ss_pred             hhccccccccHHHHHHHHhh
Q 048594          403 IRIMISIYITADELEAAFKE  422 (483)
Q Consensus       403 ~~~~~~g~i~~~el~~~~~~  422 (483)
                           +|+||.+|+.++++.
T Consensus        82 -----DG~Is~~EF~~~~~~   96 (99)
T d1snla_          82 -----DRLVTLEEFLASTQR   96 (99)
T ss_dssp             -----SSEEEHHHHHHHHHC
T ss_pred             -----CCcCcHHHHHHHHhc
Confidence                 999999999998875

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=1.5e-07  Score=77.70  Aligned_cols=64  Identities=20%  Similarity=0.469  Sum_probs=41.9

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+++++|..||+++        +|+|+.+||..+++.+|.. +++.+..++..+|.+++|.|+++||+..+..
T Consensus         6 ~elk~~F~~~D~~~--------~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~   70 (141)
T d2obha1           6 QEIREAFDLFDADG--------TGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQ   70 (141)
T ss_dssp             HHHHHHHHTTCTTC--------CSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCC--------CCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHH
Confidence            45666666666666        6666666666666666666 6666666666666666666666666666543

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.42  E-value=1.2e-07  Score=78.67  Aligned_cols=60  Identities=10%  Similarity=0.324  Sum_probs=34.8

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ++++++|..||+++        +|+|+.+||..+|+.+|.. +++++..++.    +++|.|+|+||+.++..
T Consensus         7 ~e~~~~F~~~D~d~--------~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~   67 (142)
T d1wdcb_           7 QEMKEAFSMIDVDR--------DGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSD   67 (142)
T ss_dssp             HHHHHHHHHHCTTC--------SSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCC--------CCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccc
Confidence            34555666666666        6666666666666666655 5555555442    34555666666655543

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.42  E-value=1.7e-07  Score=80.97  Aligned_cols=90  Identities=19%  Similarity=0.236  Sum_probs=72.7

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechh---------------------hh
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSL---------------------VQ  383 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~---------------------~~  383 (483)
                      ...+|+.+|.|++|.|+.+||..++..+.....++.++.+|..+|.+++|.+.....                     ..
T Consensus        53 ~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~  132 (178)
T d1s6ca_          53 AHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDT  132 (178)
T ss_dssp             HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHHhccchHHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHH
Confidence            467899999999999999999999987765667788999999999999998322111                     01


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhh
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE  422 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~  422 (483)
                      .+..+..+|+.+|.|+        ||.||.+|+.+++..
T Consensus       133 ~~~~~~~if~~~D~d~--------DG~Is~~EF~~~i~~  163 (178)
T d1s6ca_         133 PRQHVDVFFQKMDKNK--------DGIVTLDEFLESCQE  163 (178)
T ss_dssp             CHHHHHHHHHHHCTTC--------SSEECHHHHHHHTTS
T ss_pred             HHHHHHHHHHHhCCCC--------CCcEeHHHHHHHHHH
Confidence            1344678999999999        999999999998764

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.41  E-value=1.4e-07  Score=78.10  Aligned_cols=76  Identities=12%  Similarity=0.204  Sum_probs=57.0

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCCC-Cc
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHL-RG  463 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-~~  463 (483)
                      ...+++|..||+++        +|+|+.+||..+|+.+|.. +++++..    ++.+.+|.|+|+||+.++...... ..
T Consensus         5 ~~fke~F~~~D~d~--------dG~I~~~el~~~l~~lg~~~t~~ei~~----~~~~~~~~i~~~eF~~~~~~~~~~~~~   72 (140)
T d1ggwa_           5 SPYKQAFSLFDRHG--------TGRIPKTSIGDLLRACGQNPTLAEITE----IESTLPAEVDMEQFLQVLNRPNGFDMP   72 (140)
T ss_dssp             TTTHHHHHHTCSSS--------SSEECHHHHHHHHHHTSCCCCHHHHHH----HHTTSCSSEEHHHHHHHHCTTSSSSSS
T ss_pred             HHHHHHHHHHCCCC--------CCeECHHHHHHHHHHHHhhhHHHhhhh----hhccccccccchhhhhhhhhhhhcchh
Confidence            46788999999999        8999999999999999988 7776654    467888999999999988654332 12


Q ss_pred             cccccccchh
Q 048594          464 TSYRNLSHIF  473 (483)
Q Consensus       464 ~~~~~~~~~~  473 (483)
                      .+.+.+..+|
T Consensus        73 ~~~~~l~~aF   82 (140)
T d1ggwa_          73 GDPEEFVKGF   82 (140)
T ss_dssp             CCHHHHHHHH
T ss_pred             hHHHHHHHHH
Confidence            3334454444

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=98.40  E-value=1.2e-07  Score=74.71  Aligned_cols=47  Identities=34%  Similarity=0.584  Sum_probs=37.3

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhc---CCCCCHHHHHHHHHhcc
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKL---GSTLTEVDVKQYMQAAD  369 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~---~~~~~~~~~~~l~~~~d  369 (483)
                      ..++++|+.+|.|++|+|+.+||+.+++.+   |..+++++++.+++.+|
T Consensus        41 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~~~~~D   90 (109)
T d1pvaa_          41 NDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAAD   90 (109)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHC
Confidence            467889999999999999999999999887   55666666655554444

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.40  E-value=2.5e-07  Score=70.53  Aligned_cols=51  Identities=18%  Similarity=0.214  Sum_probs=40.6

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhcc
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAAD  369 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d  369 (483)
                      ++.++...++++|+.+|+|++|+|+.+|+..++...+  ++..++.+|++.+|
T Consensus         3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~--l~~~~l~~i~~~~D   53 (92)
T d1fi6a_           3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSD   53 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHcc--CCHHHHHHHHHHhC
Confidence            5778889999999999999999999999999999875  45544444444433

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.39  E-value=1.2e-07  Score=69.47  Aligned_cols=68  Identities=18%  Similarity=0.225  Sum_probs=51.2

Q ss_pred             hhHHHHHhhcCCC--CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCc
Q 048594          323 QKHKETFKQMDTN--DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSN  400 (483)
Q Consensus       323 ~~l~~~F~~~D~d--~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~  400 (483)
                      .+++++|+.||.+  ++|+|+.+||+.+|+.+|.+++..                         ..++...|+.+|.|+ 
T Consensus         5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~-------------------------~~ei~~~~~~~D~d~-   58 (76)
T d1qx2a_           5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKG-------------------------MSTLDEMIEEVDKNG-   58 (76)
T ss_dssp             HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTT-------------------------SCSHHHHHHHHCTTC-
T ss_pred             HHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCC-------------------------HHHHHHHHHHhhcCC-
Confidence            4688899988654  579999999999999998665431                         134566777777888 


Q ss_pred             cchhccccccccHHHHHHHHhhC
Q 048594          401 ILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       401 ~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                             +|.|+.+|+..++..+
T Consensus        59 -------dG~I~f~EF~~~m~~~   74 (76)
T d1qx2a_          59 -------DGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             -------SSEECHHHHHHHHHHH
T ss_pred             -------CCcCcHHHHHHHHHHH
Confidence                   7888888888877653

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.36  E-value=5.1e-07  Score=77.96  Aligned_cols=90  Identities=22%  Similarity=0.276  Sum_probs=72.6

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeec---------------------hhhh
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNL---------------------SLVQ  383 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~---------------------~~~~  383 (483)
                      ..++|+.+|.+++|.|+.+||..++..+-....++.++.+|+.+|.+++|.+...                     ....
T Consensus        61 ~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~  140 (181)
T d1bjfa_          61 AEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDEST  140 (181)
T ss_dssp             HHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSS
T ss_pred             HHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCccccc
Confidence            5678899999999999999999998888666667778999999999999972111                     0112


Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhh
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE  422 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~  422 (483)
                      .++.+..+|+.+|.|+        +|.|+.+|+.+++..
T Consensus       141 ~~~~~~~if~~~D~d~--------dG~Is~~EF~~~~~~  171 (181)
T d1bjfa_         141 PEKRTEKIFRQMDTNR--------DGKLSLEEFIRGAKS  171 (181)
T ss_dssp             HHHHHHHHHHHSCTTC--------SSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCC--------CCcEeHHHHHHHHHh
Confidence            2456788999999999        999999999998865

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=98.35  E-value=3.4e-07  Score=79.36  Aligned_cols=78  Identities=31%  Similarity=0.355  Sum_probs=65.7

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCCCCcc
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKTGTHLRGT  464 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~  464 (483)
                      ..++++|+.||+++        +|+|+.+||..+|+.++.. ++.++..++..+|.+++|.|+|++|+.++......  .
T Consensus        10 ~~l~~~F~~~D~d~--------dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~--~   79 (182)
T d1s6ia_          10 GGLKELFKMIDTDN--------SGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKL--E   79 (182)
T ss_dssp             CSHHHHHHTTSSSS--------SSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSS--C
T ss_pred             HHHHHHHHHHcCCC--------cCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhccc--c
Confidence            46889999999999        9999999999999999988 89999999999999999999999999987665432  2


Q ss_pred             ccccccchh
Q 048594          465 SYRNLSHIF  473 (483)
Q Consensus       465 ~~~~~~~~~  473 (483)
                      ..+.+..+|
T Consensus        80 ~~e~l~~aF   88 (182)
T d1s6ia_          80 REENLVSAF   88 (182)
T ss_dssp             CCCSTHHHH
T ss_pred             cHHHHHHHH
Confidence            334444444

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=98.34  E-value=3.3e-07  Score=69.45  Aligned_cols=66  Identities=18%  Similarity=0.327  Sum_probs=54.3

Q ss_pred             hhHHHHHHhhcC-CCCccchhccccccccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFT-KPSNILIRIMISIYITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d-~~~~~~~~~~~~g~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ...+..+|..|. ++|+       .+.|+..||+.++..     ++.. +++.++++|+.+|.|+||.|+|+||+.++..
T Consensus         8 i~~ii~vFhkYa~~~G~-------~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~   80 (95)
T d1qlsa_           8 IESLIAIFQKHAGRDGN-------NTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG   80 (95)
T ss_dssp             HHHHHHHHHHHHTTSSC-------TTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCCC-------cCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            456788898874 4563       478999999999976     3333 7889999999999999999999999998754

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=6.2e-08  Score=80.04  Aligned_cols=79  Identities=14%  Similarity=0.237  Sum_probs=61.6

Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcC--CCCCcccHHHHHHHHHcCCCCC-
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDR--DKDGRISYEEFCATMKTGTHLR-  462 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~--~~~g~i~~~ef~~~~~~~~~~~-  462 (483)
                      +++++|+.||+++        +|+|+.+||..+|+.+|.. +++++..++..++.  +++|.|+|++|..++....... 
T Consensus         1 e~ke~F~~~D~d~--------~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~   72 (139)
T d1w7jb1           1 EFKEAFELFDRVG--------DGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRG   72 (139)
T ss_dssp             CHHHHHHHHCCSS--------SSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC---
T ss_pred             CHHHHHHHHhCCC--------CCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhcc
Confidence            3688999999999        9999999999999999988 99999999987764  6789999999999987644322 


Q ss_pred             ccccccccchh
Q 048594          463 GTSYRNLSHIF  473 (483)
Q Consensus       463 ~~~~~~~~~~~  473 (483)
                      ....+.+..+|
T Consensus        73 ~~~~~~l~~aF   83 (139)
T d1w7jb1          73 QGTYEDYLEGF   83 (139)
T ss_dssp             -----CCHHHH
T ss_pred             ccHHHHHHHhh
Confidence            22334455544

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.33  E-value=7.9e-07  Score=76.96  Aligned_cols=90  Identities=19%  Similarity=0.227  Sum_probs=71.6

Q ss_pred             HHHHHhhcCCCCCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHhccCCCCCceeechh-----------------hhchh
Q 048594          325 HKETFKQMDTNDSGTLTYDEFKAGLSKLGST-LTEVDVKQYMQAADIDGNGTTLNLSL-----------------VQCKD  386 (483)
Q Consensus       325 l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~-~~~~~~~~l~~~~d~~~~g~~~~~~~-----------------~~~~~  386 (483)
                      ...+|+.+|.|++|.|+..||..++..+... ..++.++.+|+.+|.|++|.+.....                 ...++
T Consensus        56 ~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~  135 (183)
T d2zfda1          56 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED  135 (183)
T ss_dssp             HHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred             HHHHHHHHccCCCCcCcHHHHHHHHHhhhccCcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHH
Confidence            4678999999999999999999999887543 44666999999999999997322111                 01133


Q ss_pred             HHHHHHhhcCCCCccchhccccccccHHHHHHHHhh
Q 048594          387 TSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE  422 (483)
Q Consensus       387 ~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~  422 (483)
                      .+..+|+.+|.|+        +|.|+.+|+.+++..
T Consensus       136 ~~~~if~~~D~d~--------dG~Is~~EF~~~~~~  163 (183)
T d2zfda1         136 IIDKTFEEADTKH--------DGKIDKEEWRSLVLR  163 (183)
T ss_dssp             HHHHHHHHHCSSC--------SSEECHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCC--------CCeEcHHHHHHHHHH
Confidence            4677899999999        999999999998865

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=98.32  E-value=4.8e-07  Score=68.42  Aligned_cols=67  Identities=15%  Similarity=0.387  Sum_probs=52.2

Q ss_pred             chhHHHHHHhhcC-CCCccchhccccccccHHHHHHHHhh-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          384 CKDTSLKDFNIFT-KPSNILIRIMISIYITADELEAAFKE-----YNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       384 ~~~~~~~~F~~~d-~~~~~~~~~~~~g~i~~~el~~~~~~-----~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ....+..+|..|. ++|+       .+.|+.+||+..+..     ++.. +++.++.+|..+|.|+||.|+|+||+.++.
T Consensus         7 ai~~ii~vFhkYa~~~g~-------~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~   79 (94)
T d1j55a_           7 AMGMIIDVFSRYSGSEGS-------TQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVA   79 (94)
T ss_dssp             HHHHHHHHHHHHTTSSSC-------TTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCCC-------cccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence            3456788999985 4552       368999999999987     3433 678899999999999999999999999874


Q ss_pred             c
Q 048594          457 T  457 (483)
Q Consensus       457 ~  457 (483)
                      .
T Consensus        80 ~   80 (94)
T d1j55a_          80 A   80 (94)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=98.28  E-value=3.3e-07  Score=71.90  Aligned_cols=49  Identities=27%  Similarity=0.480  Sum_probs=36.1

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCC---CCCHHHHHHHHHhcc
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS---TLTEVDVKQYMQAAD  369 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~---~~~~~~~~~l~~~~d  369 (483)
                      ...+++++|+.+|.|++|+|+..||..+++.++.   .+++++++.+|+.+|
T Consensus        38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D   89 (107)
T d2pvba_          38 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGD   89 (107)
T ss_dssp             CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhC
Confidence            3446889999999999999999999999988742   455554444444443

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=1.3e-06  Score=75.44  Aligned_cols=90  Identities=14%  Similarity=0.173  Sum_probs=69.4

Q ss_pred             HHHHHhhcCCC-CCCCcCHHHHHHHHHhcC-CCCCHHHHHHHHHhccCCCCCceeechhh--------------hc----
Q 048594          325 HKETFKQMDTN-DSGTLTYDEFKAGLSKLG-STLTEVDVKQYMQAADIDGNGTTLNLSLV--------------QC----  384 (483)
Q Consensus       325 l~~~F~~~D~d-~~G~l~~~el~~~l~~~~-~~~~~~~~~~l~~~~d~~~~g~~~~~~~~--------------~~----  384 (483)
                      ..++|+.+|.+ ++|.|+.+||..++..+. ....++.++.+|+.+|.|++|.+......              .+    
T Consensus        59 ~~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~  138 (180)
T d1xo5a_          59 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM  138 (180)
T ss_dssp             HHHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTH
T ss_pred             HHHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHH
Confidence            45688999987 689999999999998874 44556779999999999999972221110              11    


Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhh
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKE  422 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~  422 (483)
                      ++-+..+|+.+|.|+        +|.|+.+|+.+++..
T Consensus       139 ~~~v~~~~~~~D~d~--------dG~Is~~EF~~~~~~  168 (180)
T d1xo5a_         139 KQLIDNILEESDIDR--------DGTINLSEFQHVISR  168 (180)
T ss_dssp             HHHHHHHHHHHCTTC--------SSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCC--------CCcCcHHHHHHHHHh
Confidence            223566899999999        999999999998874

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.25  E-value=2.7e-07  Score=54.69  Aligned_cols=31  Identities=23%  Similarity=0.558  Sum_probs=28.7

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcC
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLG  353 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~  353 (483)
                      ++++++|+.||+|++|+|+..||+.+|..+|
T Consensus         3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~lG   33 (33)
T d2hf5a1           3 EEIREAFRVFDKDGNGYISAAELRHVMTNLG   33 (33)
T ss_dssp             HHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence            3789999999999999999999999998876

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=98.24  E-value=5.2e-07  Score=71.01  Aligned_cols=65  Identities=20%  Similarity=0.226  Sum_probs=48.8

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCC---CCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCC
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGS---TLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKP  398 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~---~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~  398 (483)
                      ...++++|+.+|+|++|+|+.+||..+++.++.   .+++++                           +...|+.+|.|
T Consensus        40 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e---------------------------~~~~~~~~D~d   92 (109)
T d1rwya_          40 ADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKE---------------------------TKTLMAAGDKD   92 (109)
T ss_dssp             HHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHH---------------------------HHHHHHHHCTT
T ss_pred             HHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHH---------------------------HHHHHHHhCCC
Confidence            446788999999999999999999999988743   344444                           44556666677


Q ss_pred             CccchhccccccccHHHHHHHHh
Q 048594          399 SNILIRIMISIYITADELEAAFK  421 (483)
Q Consensus       399 ~~~~~~~~~~g~i~~~el~~~~~  421 (483)
                      +        +|.|+.+|+.+++.
T Consensus        93 ~--------dG~i~~~EF~~~m~  107 (109)
T d1rwya_          93 G--------DGKIGVEEFSTLVA  107 (109)
T ss_dssp             C--------SSSEEHHHHHHHHH
T ss_pred             C--------CCeEeHHHHHHHHH
Confidence            7        77777777777765

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=1.6e-06  Score=73.52  Aligned_cols=96  Identities=17%  Similarity=0.239  Sum_probs=75.0

Q ss_pred             CCCHHHH---HHHHHhccCCCCCceeechh-----hhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC
Q 048594          355 TLTEVDV---KQYMQAADIDGNGTTLNLSL-----VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG  426 (483)
Q Consensus       355 ~~~~~~~---~~l~~~~d~~~~g~~~~~~~-----~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~  426 (483)
                      .++++++   .+.|+.+|.+++|.+.....     ....+.+..+|+.+|.++        +|.|+.+|+..++......
T Consensus         9 ~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~~~~~~~l~~~~d~~~--------~g~i~~~EFl~~~~~~~~~   80 (165)
T d1auib_           9 HFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDG--------NGEVDFKEFIEGVSQFSVK   80 (165)
T ss_dssp             SCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHTCTTHHHHHHHHCTTC--------SSSEEHHHHHHHHGGGCTT
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccCCHHHHHHHHHHcccc--------chhhhhhhhhhhccccccc
Confidence            3555554   55689999999998433322     122455778999999999        9999999999999887544


Q ss_pred             --ChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          427 --DDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       427 --~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                        ..+.+..+++.+|.|++|.|+.+|+..+++..
T Consensus        81 ~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~  114 (165)
T d1auib_          81 GDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM  114 (165)
T ss_dssp             CCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHhcccccccccHHHHHHHHHHh
Confidence              45568889999999999999999999998653

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.21  E-value=8.8e-07  Score=73.55  Aligned_cols=50  Identities=20%  Similarity=0.205  Sum_probs=27.4

Q ss_pred             cccccHHHHHHHHhhCCCC--ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          408 SIYITADELEAAFKEYNMG--DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       408 ~g~i~~~el~~~~~~~~~~--~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      .+.++.+++...+......  +.+.+..+++.+|.+++|.|+.+||..++..
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~  111 (146)
T d1lkja_          60 NHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTS  111 (146)
T ss_dssp             CCEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHCSSSSCEEEHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHhhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            4555555555554443322  2345556666666666666666666665543

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=1.1e-06  Score=67.14  Aligned_cols=51  Identities=22%  Similarity=0.211  Sum_probs=39.8

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccC
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADI  370 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~  370 (483)
                      ++.++...++++|+.+| +++|+|+.+|+..+|...|  ++.++++.|+..+|.
T Consensus         4 ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~g--l~~~~L~~Iw~~~D~   54 (95)
T d2jxca1           4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDI   54 (95)
T ss_dssp             SCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSS--CCHHHHHHHHHHHCT
T ss_pred             CCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcC--CCHHHHHHHHHHhcC
Confidence            57788899999999999 8999999999999999876  345444444444443

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=98.20  E-value=2.6e-06  Score=73.59  Aligned_cols=56  Identities=25%  Similarity=0.342  Sum_probs=43.2

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCC
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGN  373 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~  373 (483)
                      .......+..+|..+|.|++|+|+.+||..+++.+|..++.++++.+|+.+|.|++
T Consensus       100 ~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~d  155 (187)
T d1uhka1         100 PTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDES  155 (187)
T ss_dssp             CCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTT
T ss_pred             HHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCC
Confidence            33444568899999999999999999999999999888877666555554443333

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.19  E-value=9.4e-07  Score=74.70  Aligned_cols=58  Identities=26%  Similarity=0.421  Sum_probs=26.9

Q ss_pred             HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHH
Q 048594          388 SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCA  453 (483)
Q Consensus       388 ~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~  453 (483)
                      ++++|+.+|++|        +|+|+.+||+.+++.++.. ++..+..++..+|.+++|.+++.||+.
T Consensus        22 l~~~F~~~D~d~--------~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~   80 (162)
T d1topa_          22 FKAAFDMFDADG--------GGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV   80 (162)
T ss_dssp             HHHHHHTTTCSC--------SSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHH
T ss_pred             HHHHHHHHcCCC--------CCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhh
Confidence            444455555555        4555555555544444444 444444444444444444444444433

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=98.19  E-value=1.9e-06  Score=65.53  Aligned_cols=56  Identities=20%  Similarity=0.215  Sum_probs=38.6

Q ss_pred             HHHhhHHHHHhhc-CCCCC-CCcCHHHHHHHHHhcCC-----CCCHHHHHHHHHhccCCCCCc
Q 048594          320 EEIQKHKETFKQM-DTNDS-GTLTYDEFKAGLSKLGS-----TLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       320 ~~~~~l~~~F~~~-D~d~~-G~l~~~el~~~l~~~~~-----~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ..+..+.++|.++ |.||+ |+|+.+||+.+|+.++.     +.++++++++|+.+|.|+||.
T Consensus         6 ~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~   68 (93)
T d1zfsa1           6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGE   68 (93)
T ss_dssp             HHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSE
T ss_pred             HHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCC
Confidence            4467899999998 88875 99999999999998753     234444444444444444443

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=6.5e-07  Score=70.41  Aligned_cols=70  Identities=14%  Similarity=0.068  Sum_probs=56.4

Q ss_pred             cchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcC
Q 048594          317 LPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFT  396 (483)
Q Consensus       317 ~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d  396 (483)
                      ++.++...++++|+.+|+|++|+|+.+|+..+|...|.  +.                           +.+..+|+..|
T Consensus        16 lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L--~~---------------------------~~L~~Iw~l~D   66 (110)
T d1iq3a_          16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKL--SI---------------------------PELSYIWELSD   66 (110)
T ss_dssp             CSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSC--SS---------------------------CCHHHHHHHHC
T ss_pred             cCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhcc--ch---------------------------HHHHHHHHHhc
Confidence            56778889999999999999999999999998876552  22                           34666777788


Q ss_pred             CCCccchhccccccccHHHHHHHHhhC
Q 048594          397 KPSNILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       397 ~~~~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                      .|+        +|+|+.+|+..+|+-+
T Consensus        67 ~d~--------dG~l~~~EF~~am~Li   85 (110)
T d1iq3a_          67 ADC--------DGALTLPEFCAAFHLI   85 (110)
T ss_dssp             SSS--------CSEEEHHHHHHHHHHH
T ss_pred             cCC--------CCeECHHHHHHHHHHH
Confidence            888        8888888888777644

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.14  E-value=1.6e-06  Score=72.81  Aligned_cols=66  Identities=24%  Similarity=0.406  Sum_probs=55.9

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHc
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMKT  457 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  457 (483)
                      ..+++++|+.||++++       +|.|+.+||..+|+.+|.. ++.++..++..++.+++|.+++++|...+..
T Consensus        13 ~~~l~~~F~~~D~d~~-------dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (156)
T d1dtla_          13 KNEFKAAFDIFVLGAE-------DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   79 (156)
T ss_dssp             HHHHHHHHHHHTTTCG-------GGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-------CCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhh
Confidence            3467888999999853       7999999999999999988 8888888998999999999999888876543

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=98.10  E-value=4.2e-06  Score=61.49  Aligned_cols=66  Identities=20%  Similarity=0.387  Sum_probs=53.1

Q ss_pred             chhHHHHHHhhcCC-CCccchhccccccccHHHHHHHHhh-CC----C-C-ChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 048594          384 CKDTSLKDFNIFTK-PSNILIRIMISIYITADELEAAFKE-YN----M-G-DDATIKEIMFEVDRDKDGRISYEEFCATM  455 (483)
Q Consensus       384 ~~~~~~~~F~~~d~-~~~~~~~~~~~g~i~~~el~~~~~~-~~----~-~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  455 (483)
                      ....+..+|..|.. +|+       .+.++..||+..++. ++    . . ++..++.+|..+|.|+||.|+|+||+.++
T Consensus         8 ai~~ii~vFhkYa~~~G~-------~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li   80 (83)
T d1xk4c1           8 NIETIINTFHQYSVKLGH-------PDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLM   80 (83)
T ss_dssp             HHHHHHHHHHHHHTTSSS-------TTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcCCC-------cccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence            34567889998864 442       479999999999987 32    1 2 45678999999999999999999999987


Q ss_pred             H
Q 048594          456 K  456 (483)
Q Consensus       456 ~  456 (483)
                      .
T Consensus        81 ~   81 (83)
T d1xk4c1          81 A   81 (83)
T ss_dssp             H
T ss_pred             h
Confidence            4

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=98.08  E-value=1.2e-06  Score=66.43  Aligned_cols=73  Identities=10%  Similarity=0.045  Sum_probs=53.8

Q ss_pred             HHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCC
Q 048594          320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPS  399 (483)
Q Consensus       320 ~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~  399 (483)
                      ..+..+..+|+.+|.| +|+||.+||+.++.......        ...              ......+..+|+.+|.||
T Consensus         6 ~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~--------~~~--------------~~~~~~v~~~~~~~D~n~   62 (92)
T d1a4pa_           6 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGF--------LEN--------------QKDPLAVDKIMKDLDQCR   62 (92)
T ss_dssp             HHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHH--------HHH--------------SCCTTHHHHHHHHHCTTS
T ss_pred             HHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhcccc--------ccc--------------cCCHHHHHHHHHHHhCCC
Confidence            4567899999999987 89999999999998753111        000              112346777888888888


Q ss_pred             ccchhccccccccHHHHHHHHhhC
Q 048594          400 NILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       400 ~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                              ||.|+.+|+..++..+
T Consensus        63 --------DG~I~F~EF~~li~~l   78 (92)
T d1a4pa_          63 --------DGKVGFQSFFSLIAGL   78 (92)
T ss_dssp             --------SSCBCHHHHHHHHHHH
T ss_pred             --------CCCCcHHHHHHHHHHH
Confidence                    8888888888777654

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=98.07  E-value=5.6e-06  Score=71.57  Aligned_cols=50  Identities=26%  Similarity=0.318  Sum_probs=36.4

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccC
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADI  370 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~  370 (483)
                      ....+..+|..+|.|++|+|+.+||..++..+|..+++++++.+|+.+|.
T Consensus       105 ~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~  154 (189)
T d1qv0a_         105 IREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDL  154 (189)
T ss_dssp             HHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCC
Confidence            34467789999999999999999999999999988887666555544443

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.07  E-value=1.8e-06  Score=71.59  Aligned_cols=53  Identities=23%  Similarity=0.555  Sum_probs=45.8

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ..+.++|..+|.+++|+|+.+||..++..+|.++++++++.++..+|.|++|.
T Consensus        81 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~  133 (146)
T d1m45a_          81 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGE  133 (146)
T ss_dssp             HHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSE
T ss_pred             HHHHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCc
Confidence            46889999999999999999999999999999999988887777666555554

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=98.06  E-value=6.3e-06  Score=62.43  Aligned_cols=56  Identities=18%  Similarity=0.278  Sum_probs=37.8

Q ss_pred             HHHhhHHHHHhhc-CCCCCC-CcCHHHHHHHHHhc-----CCCCCHHHHHHHHHhccCCCCCc
Q 048594          320 EEIQKHKETFKQM-DTNDSG-TLTYDEFKAGLSKL-----GSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       320 ~~~~~l~~~F~~~-D~d~~G-~l~~~el~~~l~~~-----~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      +.+..+.++|.++ |.|++| +|+.+||+.+++..     +...++++++++|+.+|.|+||.
T Consensus         6 ~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~   68 (93)
T d3c1va1           6 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNE   68 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSS
T ss_pred             HHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCC
Confidence            4567899999998 677654 79999999999874     33444555555555444444443

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=98.04  E-value=4.3e-06  Score=64.04  Aligned_cols=71  Identities=15%  Similarity=0.129  Sum_probs=51.5

Q ss_pred             HHHhhHHHHHhhc-CCCCC-CCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCC
Q 048594          320 EEIQKHKETFKQM-DTNDS-GTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTK  397 (483)
Q Consensus       320 ~~~~~l~~~F~~~-D~d~~-G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~  397 (483)
                      ..+..+.++|+.| |.|++ |+||..||+.+++.++....                         .+.+.+...|+.+|.
T Consensus        11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~-------------------------~~~~~v~~l~~~~D~   65 (98)
T d1yuta1          11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLL-------------------------KDVGSLDEKMKSLDV   65 (98)
T ss_dssp             HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTT-------------------------CCSSCHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccC-------------------------CCHHHHHHHHHHhcC
Confidence            4567899999998 78875 99999999999998643221                         012345667777777


Q ss_pred             CCccchhccccccccHHHHHHHHhhC
Q 048594          398 PSNILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       398 ~~~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                      |+        ||.|+.+|+..++..+
T Consensus        66 d~--------DG~IdF~EF~~l~~~l   83 (98)
T d1yuta1          66 NQ--------DSELKFNEYWRLIGEL   83 (98)
T ss_dssp             TC--------CSCBCHHHHHHHHHHH
T ss_pred             CC--------CCcCCHHHHHHHHHHH
Confidence            77        7888888887777543

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=98.01  E-value=9.7e-07  Score=83.21  Aligned_cols=63  Identities=19%  Similarity=0.288  Sum_probs=58.4

Q ss_pred             hHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 048594          386 DTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDRDKDGRISYEEFCATMK  456 (483)
Q Consensus       386 ~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  456 (483)
                      ..++++|..+|.+|        +|.|+.+||+.+|+.+|.. +++++..++..+|.|++|.|+|.||+.++.
T Consensus       122 ~~~~~~F~~~D~~~--------~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  185 (321)
T d1ij5a_         122 NILRQLFLSSAVSG--------SGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVAN  185 (321)
T ss_dssp             HHHHHHHTSSSSTT--------SSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHH
T ss_pred             HHHHHHHHHHcCCC--------CCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhh
Confidence            45789999999999        9999999999999999988 889999999999999999999999987654

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.94  E-value=9.3e-07  Score=64.88  Aligned_cols=71  Identities=17%  Similarity=0.169  Sum_probs=50.9

Q ss_pred             HHHhhHHHHHhhcCC-C-CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCC
Q 048594          320 EEIQKHKETFKQMDT-N-DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTK  397 (483)
Q Consensus       320 ~~~~~l~~~F~~~D~-d-~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~  397 (483)
                      .....+..+|+.||. + ++|+|+.+||+.+++.+......                         ..+.+...|+.+|.
T Consensus         4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~-------------------------~~~~v~~~~~~~D~   58 (78)
T d1cb1a_           4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLK-------------------------GPRTLDDLFQELDK   58 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCS-------------------------SCCCSSHHHHHTCC
T ss_pred             hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCC-------------------------CHHHHHHHHHHHcC
Confidence            345689999999974 3 46899999999999987322110                         11234457777788


Q ss_pred             CCccchhccccccccHHHHHHHHhhC
Q 048594          398 PSNILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       398 ~~~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                      |+        +|.|+.+|+..++..+
T Consensus        59 d~--------dG~Idf~EF~~l~~~l   76 (78)
T d1cb1a_          59 NG--------DGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             CS--------SSSEEHHHHHHHHHHH
T ss_pred             CC--------CCcCcHHHHHHHHHHH
Confidence            88        7888888888877654

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.94  E-value=6.2e-06  Score=70.08  Aligned_cols=68  Identities=25%  Similarity=0.326  Sum_probs=55.6

Q ss_pred             HHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCc
Q 048594          321 EIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSN  400 (483)
Q Consensus       321 ~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~  400 (483)
                      ....+..+|..+|.|++|.|+.+||..+++.+|.  ++                           +++..+|..+|.|+ 
T Consensus       100 ~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~--~~---------------------------~~~~~~f~~~D~d~-  149 (176)
T d1nyaa_         100 LGPVVKGIVGMCDKNADGQINADEFAAWLTALGM--SK---------------------------AEAAEAFNQVDTNG-  149 (176)
T ss_dssp             HHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTC--CH---------------------------HHHHHHHHHHCTTC-
T ss_pred             HHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCC--cH---------------------------HHHHHHHHHHCCCC-
Confidence            3456788999999999999999999999987652  33                           34566788888888 


Q ss_pred             cchhccccccccHHHHHHHHhhCCC
Q 048594          401 ILIRIMISIYITADELEAAFKEYNM  425 (483)
Q Consensus       401 ~~~~~~~~g~i~~~el~~~~~~~~~  425 (483)
                             +|+|+.+|+.++|+.+..
T Consensus       150 -------dG~i~~~Ef~~~~~~~~~  167 (176)
T d1nyaa_         150 -------NGELSLDELLTAVRDFHF  167 (176)
T ss_dssp             -------SSEEEHHHHHHHHSCCSS
T ss_pred             -------CCcEeHHHHHHHHHHHhc
Confidence                   899999999999988754

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=97.92  E-value=9.6e-06  Score=61.26  Aligned_cols=57  Identities=19%  Similarity=0.234  Sum_probs=39.1

Q ss_pred             hHHHhhHHHHHhhc-CCCCCC-CcCHHHHHHHHHhcCC-----CCCHHHHHHHHHhccCCCCCc
Q 048594          319 AEEIQKHKETFKQM-DTNDSG-TLTYDEFKAGLSKLGS-----TLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       319 ~~~~~~l~~~F~~~-D~d~~G-~l~~~el~~~l~~~~~-----~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ++.+..+..+|+++ |.+|+| +|+++||+.+|+....     ..++.+++++++.+|.|+||.
T Consensus         5 E~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~   68 (93)
T d1ksoa_           5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCE   68 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCE
T ss_pred             HHHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCC
Confidence            44567889999998 999999 5999999999987532     233444444444444444433

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.91  E-value=5.7e-06  Score=63.55  Aligned_cols=64  Identities=16%  Similarity=0.194  Sum_probs=48.7

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccc
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNIL  402 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~  402 (483)
                      ..++++|+.+|.|++|+|+.+|+..+++..|  ++..                           .+..+|+.+|.++   
T Consensus        11 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~--L~~~---------------------------~L~~i~~~~D~d~---   58 (99)
T d1qjta_          11 PVYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDL---------------------------ILGKIWDLADTDG---   58 (99)
T ss_dssp             THHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHH---------------------------HHHHHHHHHCCSS---
T ss_pred             HHHHHHHHHHCCCCCCcccHHHHHHHHHHcC--CcHH---------------------------HHHHHHHHHcCCC---
Confidence            3577899999999999999999999998765  4454                           4455566666677   


Q ss_pred             hhccccccccHHHHHHHHhhC
Q 048594          403 IRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       403 ~~~~~~g~i~~~el~~~~~~~  423 (483)
                           +|+|+.+|+..+++-+
T Consensus        59 -----dG~L~~~EF~~am~Li   74 (99)
T d1qjta_          59 -----KGVLSKQEFFVALRLV   74 (99)
T ss_dssp             -----SSSCCSHHHHHHHHHH
T ss_pred             -----CCccCHHHHHHHHHHH
Confidence                 6777777777766543

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=97.91  E-value=5.4e-06  Score=62.15  Aligned_cols=57  Identities=21%  Similarity=0.345  Sum_probs=40.7

Q ss_pred             hHHHhhHHHHHhhc-CCCCCC-CcCHHHHHHHHHh---cCCCCCHHHHHHHHHhccCCCCCc
Q 048594          319 AEEIQKHKETFKQM-DTNDSG-TLTYDEFKAGLSK---LGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       319 ~~~~~~l~~~F~~~-D~d~~G-~l~~~el~~~l~~---~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      +..+..+.++|+++ |+|++| +|+..||+.+++.   ++...++++++++++.+|.|+||.
T Consensus         5 E~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~   66 (89)
T d1k8ua_           5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQE   66 (89)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCE
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCC
Confidence            34567889999998 999999 6999999999997   344444455555555555554444

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.90  E-value=4.2e-06  Score=47.24  Aligned_cols=33  Identities=24%  Similarity=0.422  Sum_probs=29.5

Q ss_pred             chhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCC
Q 048594          384 CKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYN  424 (483)
Q Consensus       384 ~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~  424 (483)
                      +++++.++|++||+++        +|||+.+||..+|+.-|
T Consensus         2 sEeELae~FRifDkNa--------DGyiD~eEl~~ilr~tG   34 (34)
T d1ctda_           2 SEEELANAFRIFDKNA--------DGYIDIEELGEILRATG   34 (34)
T ss_dssp             HHHHHHHHHHTTCCSS--------SSCBCHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHccCC--------cccccHHHHHHHHHhcC
Confidence            4678999999999999        99999999999998643

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=97.87  E-value=1.7e-05  Score=67.42  Aligned_cols=67  Identities=18%  Similarity=0.249  Sum_probs=53.5

Q ss_pred             HHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCC
Q 048594          320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPS  399 (483)
Q Consensus       320 ~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~  399 (483)
                      .....+..+|..+|.|++|.||.+||..+++.++.  +                           .+.+..+|+.+|.|+
T Consensus        91 ~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~--~---------------------------~~~~~~~f~~~D~d~  141 (174)
T d2scpa_          91 VVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGL--D---------------------------KTMAPASFDAIDTNN  141 (174)
T ss_dssp             HHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC--C---------------------------GGGHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhh--h---------------------------hHHHHHHHhhcCCCC
Confidence            34456889999999999999999999999887652  1                           234566788888888


Q ss_pred             ccchhccccccccHHHHHHHHhhC
Q 048594          400 NILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       400 ~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                              +|.|+.+|+..+++..
T Consensus       142 --------dG~Is~~Ef~~~~~~f  157 (174)
T d2scpa_         142 --------DGLLSLEEFVIAGSDF  157 (174)
T ss_dssp             --------SSEECHHHHHHHHHHH
T ss_pred             --------CCcEeHHHHHHHHHHH
Confidence                    8888888888887664

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.87  E-value=7.2e-06  Score=67.75  Aligned_cols=54  Identities=20%  Similarity=0.243  Sum_probs=45.7

Q ss_pred             HhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCc
Q 048594          322 IQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       322 ~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ...+.++|+.+|.+++|+|+.+||+.+++.+|.++++++++.+++.+|.|++|.
T Consensus        76 ~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~  129 (145)
T d2mysb_          76 EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGN  129 (145)
T ss_pred             HHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCe
Confidence            346889999999999999999999999999999999988877777666555443

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=97.87  E-value=7.1e-06  Score=70.44  Aligned_cols=67  Identities=13%  Similarity=0.174  Sum_probs=53.7

Q ss_pred             HHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCC
Q 048594          320 EEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPS  399 (483)
Q Consensus       320 ~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~  399 (483)
                      .....+..+|+.+|.|++|+|+.+||+.+++.+|.  +.                           +.+..+|+.+|.|+
T Consensus       102 ~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l--~~---------------------------~~~~~~f~~~D~d~  152 (185)
T d2sasa_         102 WCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL--QC---------------------------ADVPAVYNVITDGG  152 (185)
T ss_dssp             THHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC--CC---------------------------SSHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCC--CH---------------------------HHHHHHHHHcCCCC
Confidence            33456889999999999999999999999987652  22                           34566788888888


Q ss_pred             ccchhccccccccHHHHHHHHhhC
Q 048594          400 NILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       400 ~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                              +|.|+.+|+.+++..+
T Consensus       153 --------dG~i~~~EF~~~~~~f  168 (185)
T d2sasa_         153 --------KVTFDLNRYKELYYRL  168 (185)
T ss_dssp             --------TSCCSHHHHHHHHHHH
T ss_pred             --------CCCCcHHHHHHHHHHH
Confidence                    8999999998888654

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.83  E-value=1e-05  Score=45.64  Aligned_cols=31  Identities=23%  Similarity=0.415  Sum_probs=27.8

Q ss_pred             hhHHHHHhhcCCCCCCCcCHHHHHHHHHhcC
Q 048594          323 QKHKETFKQMDTNDSGTLTYDEFKAGLSKLG  353 (483)
Q Consensus       323 ~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~  353 (483)
                      .++.+.|+.||+|.||+|+.+||..+++..|
T Consensus         4 eELae~FRifDkNaDGyiD~eEl~~ilr~tG   34 (34)
T d1ctda_           4 EELANAFRIFDKNADGYIDIEELGEILRATG   34 (34)
T ss_dssp             HHHHHHHHTTCCSSSSCBCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHccCCcccccHHHHHHHHHhcC
Confidence            4688999999999999999999999998754

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=97.77  E-value=3e-05  Score=59.46  Aligned_cols=77  Identities=8%  Similarity=0.019  Sum_probs=56.7

Q ss_pred             chHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCC
Q 048594          318 PAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTK  397 (483)
Q Consensus       318 ~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~  397 (483)
                      .++.+..+.++|+++| +++|+|+.+||+.+++..+..+..     .....               ....+..+|+.+|.
T Consensus         5 ~E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~-----~~~~~---------------~~~~v~~~~~~~D~   63 (100)
T d1psra_           5 AERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLS-----ACDKK---------------GTNYLADVFEKKDK   63 (100)
T ss_dssp             HHHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHH-----HHHHT---------------TCCGGGTHHHHHCT
T ss_pred             HHHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHcccccc-----ccccC---------------CHHHHHHHHHHhcC
Confidence            3556778999999998 789999999999999976422110     01111               12456678899999


Q ss_pred             CCccchhccccccccHHHHHHHHhhC
Q 048594          398 PSNILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       398 ~~~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                      |+        ||.|+.+|+..++..+
T Consensus        64 n~--------DG~I~F~EF~~li~~l   81 (100)
T d1psra_          64 NE--------DKKIDFSEFLSLLGDI   81 (100)
T ss_dssp             TC--------SSCBCHHHHHHHHHHH
T ss_pred             CC--------CCcCcHHHHHHHHHHH
Confidence            99        8999999998888664

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=97.68  E-value=1.4e-05  Score=59.52  Aligned_cols=70  Identities=7%  Similarity=-0.001  Sum_probs=48.9

Q ss_pred             hHHHhhHHHHHhhc-CCCCCCC-cCHHHHHHHHHh-cCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhc
Q 048594          319 AEEIQKHKETFKQM-DTNDSGT-LTYDEFKAGLSK-LGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIF  395 (483)
Q Consensus       319 ~~~~~~l~~~F~~~-D~d~~G~-l~~~el~~~l~~-~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~  395 (483)
                      +..+..+.++|+++ |.||+|. ++.+||+.++.. +|..++..                           .+.+.++..
T Consensus         6 E~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~---------------------------~v~~i~~~~   58 (87)
T d1xk4a1           6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKK---------------------------GADVWFKEL   58 (87)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTT---------------------------CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchH---------------------------HHHHHHHHh
Confidence            34567888999998 9999986 599999999986 45333333                           345556666


Q ss_pred             CCCCccchhccccccccHHHHHHHHhhC
Q 048594          396 TKPSNILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       396 d~~~~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                      |.|+        ||.|+.+|+..++..+
T Consensus        59 D~n~--------DG~IdF~EF~~l~~~l   78 (87)
T d1xk4a1          59 DINT--------DGAVNFQEFLILVIKM   78 (87)
T ss_dssp             CTTC--------SSSBCHHHHHHHHHHH
T ss_pred             CCCC--------CCcCcHHHHHHHHHHH
Confidence            6666        6777777776666543

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=97.60  E-value=0.00013  Score=53.91  Aligned_cols=56  Identities=20%  Similarity=0.176  Sum_probs=36.8

Q ss_pred             HHHhhHHHHHhhc-CCCCCC-CcCHHHHHHHHHhcC-----CCCCHHHHHHHHHhccCCCCCc
Q 048594          320 EEIQKHKETFKQM-DTNDSG-TLTYDEFKAGLSKLG-----STLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       320 ~~~~~l~~~F~~~-D~d~~G-~l~~~el~~~l~~~~-----~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ..+..+.++|+++ +.++++ +|+++||+.+++...     ...+++.++++++..|.|+||.
T Consensus         5 ~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~   67 (87)
T d1e8aa_           5 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQ   67 (87)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSC
T ss_pred             HHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCc
Confidence            4567889999998 556554 799999999998742     2233444555555444444444

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.21  E-value=0.00062  Score=61.24  Aligned_cols=29  Identities=21%  Similarity=0.210  Sum_probs=23.7

Q ss_pred             CeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594          137 IMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus       137 ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      ++|+|+.|.||++.   +...+.|+||+.+..
T Consensus       185 l~HgD~~~~Nil~~---~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         185 FSHGDLGDSNIFVK---DGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EECSCCCTTSEEEE---TTEEEEECCCTTCEE
T ss_pred             EEEeeccCcceeec---CCceEEEeechhccc
Confidence            78999999999993   444556999998765

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.12  E-value=0.00055  Score=65.90  Aligned_cols=30  Identities=10%  Similarity=0.183  Sum_probs=22.4

Q ss_pred             eeeecccCceeEEEEEECCCCCEEEEEEec
Q 048594           54 AEELCRGESGRIYLCTENSTGLQFACKSIS   83 (483)
Q Consensus        54 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~   83 (483)
                      .+.||-|....||++....+++.+++|.-.
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~   60 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAV   60 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEEC
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCC
Confidence            556899999999999988888899999654

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=5.4e-05  Score=64.15  Aligned_cols=91  Identities=5%  Similarity=-0.003  Sum_probs=60.7

Q ss_pred             HHHHHHh--ccCCCCCceeechhh-----------hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCC
Q 048594          361 VKQYMQA--ADIDGNGTTLNLSLV-----------QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGD  427 (483)
Q Consensus       361 ~~~l~~~--~d~~~~g~~~~~~~~-----------~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~  427 (483)
                      +++.+..  +|.|++|.+......           ...+.+...|...|.++        +|.|+.+|+..+++.+..  
T Consensus         7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~--------~~~i~F~eF~~~~~~l~~--   76 (170)
T d2zkmx1           7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAIN--------PEDFPEPVYKSFLMSLCP--   76 (170)
T ss_dssp             HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEEC--------GGGCCHHHHHHHHHHHSC--
T ss_pred             HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccC--------CCccCHHHHHHHHhccCC--
Confidence            4445444  699999983322111           12234455688889999        999999999999998754  


Q ss_pred             hHHHHHHHHHHcCCCCCcccHHHHHHHHHcCCCC
Q 048594          428 DATIKEIMFEVDRDKDGRISYEEFCATMKTGTHL  461 (483)
Q Consensus       428 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~  461 (483)
                      ..++..+|..+|.|++|.||.+||..+|+....+
T Consensus        77 r~ei~~~F~~~d~d~~~~it~~el~~fL~~~Q~~  110 (170)
T d2zkmx1          77 RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRD  110 (170)
T ss_dssp             CHHHHTTCC--------CCCHHHHHHHHHHTCC-
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHhcc
Confidence            5789999999999999999999999999876543

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=96.99  E-value=0.0016  Score=48.08  Aligned_cols=56  Identities=20%  Similarity=0.275  Sum_probs=35.9

Q ss_pred             HHHhhHHHHHhhc-CCCCC-CCcCHHHHHHHHHhc-----CCCCCHHHHHHHHHhccCCCCCc
Q 048594          320 EEIQKHKETFKQM-DTNDS-GTLTYDEFKAGLSKL-----GSTLTEVDVKQYMQAADIDGNGT  375 (483)
Q Consensus       320 ~~~~~l~~~F~~~-D~d~~-G~l~~~el~~~l~~~-----~~~~~~~~~~~l~~~~d~~~~g~  375 (483)
                      ..+..+..+|+++ ..+|+ ++|++.||+.+++.-     +....+..++++|+..|.|+||.
T Consensus         6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~   68 (90)
T d3cr5x1           6 KAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGE   68 (90)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSS
T ss_pred             HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCc
Confidence            3456788999998 45554 589999999999972     22233444555555555444444

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.00056  Score=55.44  Aligned_cols=63  Identities=14%  Similarity=0.170  Sum_probs=51.5

Q ss_pred             HHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHcC
Q 048594          388 SLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDRDKDGRISYEEFCATMKTG  458 (483)
Q Consensus       388 ~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  458 (483)
                      +.--|..+|.+++       ||+|+..||..+.+.+ .+.+.-+..++..+|.|+||.||+.||+.-+.-.
T Consensus        79 v~W~F~~LD~n~~-------D~~L~~~EL~~l~~~L-~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~v~  141 (151)
T d1sraa_          79 VHWQFGQLDQHPI-------DGYLSHTELAPLRAPL-IPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIK  141 (151)
T ss_dssp             HHHHHHHHCCTTC-------SSEECTTTTGGGGSTT-STTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTCC
T ss_pred             ceeehhhcCCCCC-------CCccCHHHHHHHHHhh-cCCchHHHHHHHHhcCCCCCcCCHHHHHHHcCCC
Confidence            4455999999942       8999999999976544 3356779999999999999999999999987433

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=96.38  E-value=0.003  Score=47.05  Aligned_cols=74  Identities=9%  Similarity=0.055  Sum_probs=46.2

Q ss_pred             HHHhhHHHHHhhcC-CCCC-CCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCC
Q 048594          320 EEIQKHKETFKQMD-TNDS-GTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTK  397 (483)
Q Consensus       320 ~~~~~l~~~F~~~D-~d~~-G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~  397 (483)
                      ..+..+-.+|.++. .+|+ ++|++.||+.+++.-        +-.++..-              ...+.+.++|+.+|.
T Consensus         6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~E--------l~~~l~~~--------------~d~~~vd~im~~LD~   63 (95)
T d1qlsa_           6 RCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTE--------LAAFTQNQ--------------KDPGVLDRMMKKLDL   63 (95)
T ss_dssp             HHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTT--------SHHHHHHC--------------CCTHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHH--------HHHHhcCC--------------CCHHHHHHHHHHhcC
Confidence            34567888999874 4554 689999999999851        01111110              012346666777777


Q ss_pred             CCccchhccccccccHHHHHHHHhhC
Q 048594          398 PSNILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       398 ~~~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                      |+        ||.|+.+|+..++..+
T Consensus        64 n~--------Dg~vdF~EF~~li~~l   81 (95)
T d1qlsa_          64 DS--------DGQLDFQEFLNLIGGL   81 (95)
T ss_dssp             TC--------SSSBCHHHHHHHHHHH
T ss_pred             CC--------CCcCcHHHHHHHHHHH
Confidence            77        6777777776665544

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=96.22  E-value=0.0049  Score=45.72  Aligned_cols=32  Identities=25%  Similarity=0.300  Sum_probs=24.8

Q ss_pred             HHHhhHHHHHhhcC-CCCC-CCcCHHHHHHHHHh
Q 048594          320 EEIQKHKETFKQMD-TNDS-GTLTYDEFKAGLSK  351 (483)
Q Consensus       320 ~~~~~l~~~F~~~D-~d~~-G~l~~~el~~~l~~  351 (483)
                      ..+..+-.+|.++. .+++ ++|++.||+.+++.
T Consensus         6 ~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~   39 (94)
T d1j55a_           6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEK   39 (94)
T ss_dssp             HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHH
Confidence            34567888999984 3443 58999999999987

>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: alpha-Actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0097  Score=41.25  Aligned_cols=63  Identities=16%  Similarity=0.326  Sum_probs=50.9

Q ss_pred             hchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCCChHHHHHHHHHHcC-----CCCCcccHHHHHHHHHc
Q 048594          383 QCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMGDDATIKEIMFEVDR-----DKDGRISYEEFCATMKT  457 (483)
Q Consensus       383 ~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~~~~d~-----~~~g~i~~~ef~~~~~~  457 (483)
                      .+.+++.++|+.+-. +        ..|||.+||++.|      ++++++.++..+-.     -..|..+|..|++-+-+
T Consensus         5 ~TaEqv~~aFr~lA~-~--------KpyVT~~dL~~~L------~peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~g   69 (73)
T d1h8ba_           5 DTAEQVIASFRILAS-D--------KPYILAEELRREL------PPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYG   69 (73)
T ss_dssp             STHHHHHHHHHHHTT-S--------CSSBCHHHHHHHS------CHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTC
T ss_pred             ccHHHHHHHHHHHhC-C--------CCeeCHHHHHhhc------CHHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHhc
Confidence            467899999999954 4        4999999999987      67889999988853     25688999999998866


Q ss_pred             CCC
Q 048594          458 GTH  460 (483)
Q Consensus       458 ~~~  460 (483)
                      .+.
T Consensus        70 es~   72 (73)
T d1h8ba_          70 ESD   72 (73)
T ss_dssp             CSC
T ss_pred             ccC
Confidence            543

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0075  Score=46.94  Aligned_cols=48  Identities=6%  Similarity=0.007  Sum_probs=40.0

Q ss_pred             cccccHHHHHHHHhhCCCC---ChHHHHHHHHHHcCCCC--------CcccHHHHHHHH
Q 048594          408 SIYITADELEAAFKEYNMG---DDATIKEIMFEVDRDKD--------GRISYEEFCATM  455 (483)
Q Consensus       408 ~g~i~~~el~~~~~~~~~~---~~~~~~~~~~~~d~~~~--------g~i~~~ef~~~~  455 (483)
                      +|.|+.++++.++..+...   ++.-++.++..+|.|++        |.|+|.||+..|
T Consensus        45 ~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~efv~~L  103 (118)
T d1tuza_          45 GDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCYF  103 (118)
T ss_dssp             TTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHH
T ss_pred             ccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHHHHHH
Confidence            7999999999999876332   35678889999999976        899999998765

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.70  E-value=0.017  Score=42.83  Aligned_cols=71  Identities=6%  Similarity=0.066  Sum_probs=57.1

Q ss_pred             hhchhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhC-CC-C-ChHHHHHHHHHHcCCC----CCcccHHHHHHH
Q 048594          382 VQCKDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEY-NM-G-DDATIKEIMFEVDRDK----DGRISYEEFCAT  454 (483)
Q Consensus       382 ~~~~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~-~~-~-~~~~~~~~~~~~d~~~----~g~i~~~ef~~~  454 (483)
                      +....++..+|..+-.++         +.+|.++|.+.|+.. +. . +++.+.+++..+..+.    .|.+|+++|+.+
T Consensus         4 l~~R~ei~~if~~ys~~~---------~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~f   74 (94)
T d1qasa1           4 LTQRAEIDRAFEEAAGSA---------ETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMY   74 (94)
T ss_dssp             TSCCHHHHHHHHHHHTTS---------SSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHH
T ss_pred             CCccHHHHHHHHHHhCCC---------CccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHH
Confidence            345678899999997655         789999999999985 43 3 7778899999988753    478999999999


Q ss_pred             HHcCCCC
Q 048594          455 MKTGTHL  461 (483)
Q Consensus       455 ~~~~~~~  461 (483)
                      |.+..++
T Consensus        75 L~S~~N~   81 (94)
T d1qasa1          75 LLSADGN   81 (94)
T ss_dssp             HHSSTTB
T ss_pred             HcCcccC
Confidence            9877654

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=95.47  E-value=0.013  Score=51.83  Aligned_cols=29  Identities=17%  Similarity=0.084  Sum_probs=23.6

Q ss_pred             CeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594          137 IMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus       137 ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      ++|+|+.|.||++.   ....+-|+||+.+..
T Consensus       177 liHgD~~~~Nvl~~---~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         177 VTHGDACLPNIMVE---NGRFSGFIDCGRLGV  205 (255)
T ss_dssp             EECSSCCGGGEEEE---TTEEEEECCCTTCEE
T ss_pred             EEeCCCCCcceEEe---CCceEEEEEchhccc
Confidence            79999999999994   334567999998754

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.015  Score=45.12  Aligned_cols=81  Identities=9%  Similarity=0.080  Sum_probs=59.4

Q ss_pred             ccchHHHhhHHHHHhhcC---CCCCCCcCHHHHHHHHHhcCC-C-CCHHHHHHHHHhccCCCCCceeechhhhchhHHHH
Q 048594          316 NLPAEEIQKHKETFKQMD---TNDSGTLTYDEFKAGLSKLGS-T-LTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLK  390 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D---~d~~G~l~~~el~~~l~~~~~-~-~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~  390 (483)
                      .++..++..+.+.|+...   ...+|.|+.++|+.++..+.. . .++.-+++||..+|.++++.               
T Consensus        21 ~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~---------------   85 (118)
T d1tuza_          21 EYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLN---------------   85 (118)
T ss_dssp             HHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTT---------------
T ss_pred             CCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccc---------------
Confidence            467888889999997543   246899999999999988732 2 23555677777777776653               


Q ss_pred             HHhhcCCCCccchhccccccccHHHHHHHHhhC
Q 048594          391 DFNIFTKPSNILIRIMISIYITADELEAAFKEY  423 (483)
Q Consensus       391 ~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~  423 (483)
                          .+..+        +|.|+..|+..+|..+
T Consensus        86 ----~~~~~--------~g~I~f~efv~~LS~l  106 (118)
T d1tuza_          86 ----ETNVT--------KDVVCLNDVSCYFSLL  106 (118)
T ss_dssp             ----CCCCC--------SCCEEHHHHHHHHHHH
T ss_pred             ----cccCC--------CceeeHHHHHHHHHHH
Confidence                12335        6999999999988776

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=95.15  E-value=0.028  Score=40.36  Aligned_cols=31  Identities=32%  Similarity=0.364  Sum_probs=24.1

Q ss_pred             HHhhHHHHHhhcC-CCC-CCCcCHHHHHHHHHh
Q 048594          321 EIQKHKETFKQMD-TND-SGTLTYDEFKAGLSK  351 (483)
Q Consensus       321 ~~~~l~~~F~~~D-~d~-~G~l~~~el~~~l~~  351 (483)
                      -+..+-.+|+++- .+| .++|++.||+.+++.
T Consensus         8 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~   40 (83)
T d1xk4c1           8 NIETIINTFHQYSVKLGHPDTLNQGEFKELVRK   40 (83)
T ss_dssp             HHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHH
Confidence            4556788999984 333 479999999999986

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=93.31  E-value=0.054  Score=49.83  Aligned_cols=28  Identities=18%  Similarity=0.138  Sum_probs=22.2

Q ss_pred             CCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594          136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus       136 ~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      +++|+|+.|.|||+.   + + ..++||+-+..
T Consensus       193 ~liHgDlh~~NvL~~---~-~-~~~IDFdd~~~  220 (325)
T d1zyla1         193 LRLHGDCHAGNILWR---D-G-PMFVDLDDARN  220 (325)
T ss_dssp             EECCSSCSGGGEEES---S-S-EEECCCTTCCE
T ss_pred             eeecCCCCcccEEEe---C-C-ceEEechhccc
Confidence            589999999999993   2 2 45899997754

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=93.22  E-value=0.07  Score=50.49  Aligned_cols=32  Identities=13%  Similarity=0.175  Sum_probs=23.8

Q ss_pred             EeeeecccCceeEEEEEECC-------CCCEEEEEEecc
Q 048594           53 IAEELCRGESGRIYLCTENS-------TGLQFACKSISK   84 (483)
Q Consensus        53 ~~~~lg~G~~g~V~~~~~~~-------~~~~~avK~~~~   84 (483)
                      -++.|+-|-.-.+|++....       ..+.+.+++...
T Consensus        46 ~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~   84 (395)
T d1nw1a_          46 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN   84 (395)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS
T ss_pred             EEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC
Confidence            46778889999999998653       245687887653

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=92.87  E-value=0.13  Score=33.88  Aligned_cols=54  Identities=26%  Similarity=0.316  Sum_probs=48.9

Q ss_pred             ccchHHHhhHHHHHhhcCCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhcc
Q 048594          316 NLPAEEIQKHKETFKQMDTNDSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAAD  369 (483)
Q Consensus       316 ~~~~~~~~~l~~~F~~~D~d~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d  369 (483)
                      .+..++.++-.++|+.||.|...--...+-..+|..+|...+..+.+.++++.-
T Consensus         7 algpeekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkear   60 (86)
T d1j7qa_           7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEAR   60 (86)
T ss_dssp             CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHH
T ss_pred             ccCchhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhc
Confidence            456677888899999999999999999999999999999999999999998874

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.82  E-value=0.089  Score=47.84  Aligned_cols=30  Identities=30%  Similarity=0.439  Sum_probs=24.8

Q ss_pred             CCeeeCCCCCeEEEeeCCCCCcEEEeeccccee
Q 048594          136 GIMHRDLKPENFIFTTDDENATLKATDFGLAFF  168 (483)
Q Consensus       136 ~ivH~dlkp~NIll~~~~~~~~ikl~Dfg~a~~  168 (483)
                      |+||+|+.++||++.   .+...-++||+.+..
T Consensus       184 giIHgDl~~dNvl~~---~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         184 GVIHADLFQDNVFFL---GDELSGLIDFYFACN  213 (316)
T ss_dssp             EEECSCCCGGGEEEE---TTEEEEECCCTTCEE
T ss_pred             ccccCCcchhhhhcc---cccceeEeccccccc
Confidence            699999999999994   445568999998753

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=90.71  E-value=0.57  Score=30.72  Aligned_cols=63  Identities=21%  Similarity=0.266  Sum_probs=51.0

Q ss_pred             hhHHHHHHhhcCCCCccchhccccccccHHHHHHHHhhCCCC-ChHHHHHHHHHHcC-CCC-CcccHHHHHHHH
Q 048594          385 KDTSLKDFNIFTKPSNILIRIMISIYITADELEAAFKEYNMG-DDATIKEIMFEVDR-DKD-GRISYEEFCATM  455 (483)
Q Consensus       385 ~~~~~~~F~~~d~~~~~~~~~~~~g~i~~~el~~~~~~~~~~-~~~~~~~~~~~~d~-~~~-g~i~~~ef~~~~  455 (483)
                      .++..++|..||++-        ..--..++-+..|.++|.. +..+.+.||++.-. .+| ..|.=+||+.+.
T Consensus        13 kdecmkifdifdrna--------eniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlc   78 (86)
T d1j7qa_          13 KDECMKIFDIFDRNA--------ENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLC   78 (86)
T ss_dssp             HHHHHHHHHHHSTTT--------TSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHH
T ss_pred             HHHHHHHHHHHhccc--------cccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHH
Confidence            456788999999998        6667788999999999988 99999999998643 333 468888888765

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.20  E-value=0.079  Score=42.36  Aligned_cols=57  Identities=25%  Similarity=0.308  Sum_probs=39.6

Q ss_pred             HHhhcCCC-CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHhccCCCCCceeechhhhchhHHHHHHhhcCCCCccchhcc
Q 048594          328 TFKQMDTN-DSGTLTYDEFKAGLSKLGSTLTEVDVKQYMQAADIDGNGTTLNLSLVQCKDTSLKDFNIFTKPSNILIRIM  406 (483)
Q Consensus       328 ~F~~~D~d-~~G~l~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~~~~~~~~~~~~~~~~~F~~~d~~~~~~~~~~  406 (483)
                      .|..+|.| +||.|+..||+.+...+  .+.+                           .=+...|+..|.|+       
T Consensus        82 ~F~~LD~n~~D~~L~~~EL~~l~~~L--~~~e---------------------------~C~~~F~~~CD~n~-------  125 (151)
T d1sraa_          82 QFGQLDQHPIDGYLSHTELAPLRAPL--IPME---------------------------HCTTRFFETCDLDN-------  125 (151)
T ss_dssp             HHHHHCCTTCSSEECTTTTGGGGSTT--STTG---------------------------GGHHHHHHHHCTTC-------
T ss_pred             ehhhcCCCCCCCccCHHHHHHHHHhh--cCCc---------------------------hHHHHHHHHhcCCC-------
Confidence            49999999 59999999988754322  1111                           22445677778888       


Q ss_pred             ccccccHHHHHHHHh
Q 048594          407 ISIYITADELEAAFK  421 (483)
Q Consensus       407 ~~g~i~~~el~~~~~  421 (483)
                       ||.|+..|....|.
T Consensus       126 -D~~Is~~EW~~Cf~  139 (151)
T d1sraa_         126 -DKYIALDEWAGCFG  139 (151)
T ss_dssp             -SSSEEHHHHHHHTT
T ss_pred             -CCcCCHHHHHHHcC
Confidence             78888888777663