BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>048596
MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRREQMKKATNSRELRHSQSDGSVGMMQ
NRQSNGGIIFRTSKVLPDIDPPSPKVSGCWFCCPGK

High Scoring Gene Products

Symbol, full name Information P value
AT1G80180 protein from Arabidopsis thaliana 1.3e-13
AT5G20100 protein from Arabidopsis thaliana 1.9e-12
AT1G15400 protein from Arabidopsis thaliana 3.0e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  048596
        (96 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2016264 - symbol:AT1G80180 "AT1G80180" species...   102  1.3e-13   2
TAIR|locus:2147710 - symbol:AT5G20100 "AT5G20100" species...   166  1.9e-12   1
TAIR|locus:2037738 - symbol:AT1G15400 "AT1G15400" species...    98  3.0e-05   1


>TAIR|locus:2016264 [details] [associations]
            symbol:AT1G80180 "AT1G80180" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0010375 "stomatal complex
            patterning" evidence=IMP] EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005886 EMBL:AC009322 GO:GO:0010375 HOGENOM:HOG000237561
            ProtClustDB:CLSN2689347 EMBL:AY039872 EMBL:AY077663 EMBL:AY087473
            IPI:IPI00539990 PIR:E96833 RefSeq:NP_565233.1 UniGene:At.11611
            UniGene:At.75141 STRING:Q9SSC1 PaxDb:Q9SSC1 PRIDE:Q9SSC1
            ProMEX:Q9SSC1 EnsemblPlants:AT1G80180.1 GeneID:844358
            KEGG:ath:AT1G80180 TAIR:At1g80180 eggNOG:NOG306053
            InParanoid:Q9SSC1 OMA:HHRNTGR PhylomeDB:Q9SSC1
            Genevestigator:Q9SSC1 Uniprot:Q9SSC1
        Length = 138

 Score = 102 (41.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
 Identities = 22/42 (52%), Positives = 27/42 (64%)

Query:     1 MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRREQMKKAT 42
             MA  QRS +SFRRQGSSG+VW D  I+ +L+Q      K  T
Sbjct:     1 MAGLQRSTISFRRQGSSGIVWDDRLIA-ELSQQAANDRKGET 41

 Score = 88 (36.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query:    35 REQMKKATNSRELRHSQSDGSVGMMQNRQSNGGIIFR---TSKVLPDIDPPSPKVSGCWF 91
             ++Q  K      L+  ++DG  GM ++R + GG I     T +V P +DPPSP++S  + 
Sbjct:    56 QDQTTKPIAGEGLKPIRTDG--GMERSRSNGGGAIRHHRNTGRVSPAVDPPSPRLSA-FG 112

Query:    92 CC 93
             CC
Sbjct:   113 CC 114


>TAIR|locus:2147710 [details] [associations]
            symbol:AT5G20100 "AT5G20100" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AF296836
            HOGENOM:HOG000237561 IPI:IPI00527577 RefSeq:NP_197510.1
            UniGene:At.50470 EnsemblPlants:AT5G20100.1 GeneID:832132
            KEGG:ath:AT5G20100 TAIR:At5g20100 eggNOG:NOG284225
            InParanoid:Q3E9A8 OMA:QRSTASF PhylomeDB:Q3E9A8
            ProtClustDB:CLSN2916690 Genevestigator:Q3E9A8 Uniprot:Q3E9A8
        Length = 113

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 42/98 (42%), Positives = 55/98 (56%)

Query:     5 QRSEVSFRRQGSSGLVWQDAFISGDL-NQMRREQM-------KKATNSRELRHSQSDGSV 56
             QRS  SFRRQGSSGL+W D F+SG++ N  R+E           A  +  ++ S SDG  
Sbjct:     4 QRSTASFRRQGSSGLIWNDRFLSGEIRNDERQEDRCNDHRDGSMAATTATVKRSASDGGC 63

Query:    57 GMMQNRQSNGGIIFRTSKVLPDIDPPSPKVS--GCWFC 92
             G       +GG   R  ++ P +DPPSPK+S  GC FC
Sbjct:    64 G-------HGG---RLGELSPALDPPSPKISAVGCGFC 91


>TAIR|locus:2037738 [details] [associations]
            symbol:AT1G15400 "AT1G15400" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0010260 "organ senescence" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005886 EMBL:AC007591
            UniGene:At.11423 UniGene:At.19791 EMBL:AF336927 EMBL:AY085171
            EMBL:AK228431 IPI:IPI00520919 IPI:IPI00541686 IPI:IPI00846122
            PIR:F86288 RefSeq:NP_001077541.1 RefSeq:NP_563975.2
            RefSeq:NP_849670.1 STRING:Q9XI29 PaxDb:Q9XI29 PRIDE:Q9XI29
            EnsemblPlants:AT1G15400.3 GeneID:838110 KEGG:ath:AT1G15400
            TAIR:At1g15400 eggNOG:NOG290209 HOGENOM:HOG000237561
            InParanoid:Q9XI29 OMA:SPRISSC PhylomeDB:Q9XI29
            ProtClustDB:CLSN2689347 Genevestigator:Q9XI29 Uniprot:Q9XI29
        Length = 148

 Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 24/63 (38%), Positives = 35/63 (55%)

Query:    36 EQMKKATNSRELRHSQSDGSV-GMMQNRQSNGGIIFR----TSKVLPDIDPPSPKVSGCW 90
             EQ+K      +LR  ++ G   G ++  +SNGG   R    T +V P +DPPSP++S C 
Sbjct:    55 EQVKPIDEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCG 114

Query:    91 FCC 93
              CC
Sbjct:   115 -CC 116

 Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query:     1 MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRREQMKKATNSRELRHSQSDGS 55
             M   QRS +SFRRQGSSG+V+ D  I+ +LN+    + K  +   E     S+ S
Sbjct:     1 MEGLQRSTISFRRQGSSGIVFDDRLIA-ELNKSGNNEQKDESQRDEQPKPMSESS 54


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.131   0.407    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       96        96   0.00091  102 3  11 22  0.37    30
                                                     29  0.43    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  544 (58 KB)
  Total size of DFA:  111 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.41u 0.13s 10.54t   Elapsed:  00:00:01
  Total cpu time:  10.41u 0.13s 10.54t   Elapsed:  00:00:01
  Start:  Sat May 11 08:57:55 2013   End:  Sat May 11 08:57:56 2013

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