Query 048599
Match_columns 354
No_of_seqs 498 out of 2029
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 11:02:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048599.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048599hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4223 Reticulocalbin, calume 100.0 2.3E-39 5E-44 279.0 21.4 260 80-354 57-325 (325)
2 COG5126 FRQ1 Ca2+-binding prot 99.9 2.8E-22 6E-27 159.9 13.6 141 175-331 13-153 (160)
3 COG5126 FRQ1 Ca2+-binding prot 99.9 9.6E-22 2.1E-26 156.8 13.3 137 102-248 19-155 (160)
4 KOG0027 Calmodulin and related 99.9 4.4E-21 9.6E-26 156.2 14.6 141 179-330 5-145 (151)
5 KOG0027 Calmodulin and related 99.9 4.5E-21 9.7E-26 156.2 14.1 142 102-248 7-148 (151)
6 KOG0037 Ca2+-binding protein, 99.8 1.4E-19 3.1E-24 148.5 13.0 152 103-286 57-209 (221)
7 PTZ00183 centrin; Provisional 99.8 5.7E-18 1.2E-22 139.2 14.9 141 175-330 10-150 (158)
8 KOG0028 Ca2+-binding protein ( 99.8 4.2E-18 9.1E-23 132.5 11.7 139 101-248 31-169 (172)
9 PTZ00184 calmodulin; Provision 99.8 6.5E-18 1.4E-22 137.4 13.5 139 177-330 6-144 (149)
10 PTZ00183 centrin; Provisional 99.8 1E-17 2.2E-22 137.7 14.1 138 102-248 16-153 (158)
11 KOG0028 Ca2+-binding protein ( 99.8 1.6E-17 3.4E-22 129.4 13.4 141 175-330 26-166 (172)
12 PTZ00184 calmodulin; Provision 99.8 2E-17 4.3E-22 134.5 13.5 138 102-248 10-147 (149)
13 KOG4251 Calcium binding protei 99.7 1.2E-17 2.6E-22 138.7 11.1 243 101-354 99-362 (362)
14 KOG0030 Myosin essential light 99.7 7.6E-16 1.6E-20 117.1 10.5 140 101-248 9-150 (152)
15 KOG0034 Ca2+/calmodulin-depend 99.7 1.8E-15 4E-20 125.2 13.4 137 178-330 29-171 (187)
16 KOG0037 Ca2+-binding protein, 99.7 1.8E-15 3.8E-20 124.5 12.9 131 183-334 58-188 (221)
17 KOG0031 Myosin regulatory ligh 99.6 1E-14 2.2E-19 112.9 13.3 135 101-248 30-164 (171)
18 KOG0031 Myosin regulatory ligh 99.6 8E-15 1.7E-19 113.5 12.7 133 179-330 29-161 (171)
19 KOG0034 Ca2+/calmodulin-depend 99.6 1.1E-14 2.3E-19 120.7 12.6 139 102-249 32-175 (187)
20 KOG0044 Ca2+ sensor (EF-Hand s 99.6 1.9E-14 4.2E-19 119.1 12.4 138 182-331 26-172 (193)
21 KOG0030 Myosin essential light 99.6 1.8E-14 3.9E-19 109.7 10.5 140 179-332 8-149 (152)
22 KOG0036 Predicted mitochondria 99.6 3.4E-14 7.3E-19 126.9 12.6 136 179-334 11-146 (463)
23 KOG0044 Ca2+ sensor (EF-Hand s 99.5 6.4E-14 1.4E-18 116.0 11.9 139 104-248 27-174 (193)
24 KOG2643 Ca2+ binding protein, 99.5 1.3E-13 2.8E-18 123.9 12.6 207 104-338 234-457 (489)
25 KOG0036 Predicted mitochondria 99.5 1.1E-13 2.4E-18 123.7 11.8 133 101-248 12-145 (463)
26 KOG4223 Reticulocalbin, calume 99.5 5.8E-13 1.3E-17 116.0 11.0 138 102-248 162-304 (325)
27 PF13499 EF-hand_7: EF-hand do 99.2 2.6E-11 5.7E-16 84.0 6.6 62 104-166 1-66 (66)
28 PF13499 EF-hand_7: EF-hand do 99.2 1.8E-11 4E-16 84.8 5.6 62 269-330 2-64 (66)
29 cd05022 S-100A13 S-100A13: S-1 99.2 4.9E-11 1.1E-15 86.9 5.5 69 265-340 6-77 (89)
30 KOG0377 Protein serine/threoni 99.2 3.3E-10 7.1E-15 102.2 11.3 150 182-335 464-616 (631)
31 KOG2643 Ca2+ binding protein, 99.1 4.1E-10 8.9E-15 101.7 11.6 158 149-330 208-380 (489)
32 cd05022 S-100A13 S-100A13: S-1 99.1 3.3E-10 7.1E-15 82.6 7.1 67 103-170 8-77 (89)
33 PLN02964 phosphatidylserine de 99.1 1.3E-09 2.9E-14 106.1 12.7 103 179-295 140-243 (644)
34 KOG2562 Protein phosphatase 2 99.0 1.8E-08 3.8E-13 92.1 16.9 210 103-330 174-420 (493)
35 cd05027 S-100B S-100B: S-100B 99.0 4.4E-10 9.4E-15 82.1 5.1 69 266-341 7-82 (88)
36 KOG0751 Mitochondrial aspartat 99.0 5.1E-09 1.1E-13 95.9 12.1 203 102-330 32-240 (694)
37 cd05027 S-100B S-100B: S-100B 99.0 1.8E-09 3.9E-14 78.8 7.0 67 102-169 7-80 (88)
38 KOG0038 Ca2+-binding kinase in 99.0 2.5E-09 5.4E-14 82.3 7.7 96 224-330 74-173 (189)
39 PLN02964 phosphatidylserine de 98.9 4E-09 8.6E-14 102.9 10.3 97 103-210 143-243 (644)
40 cd05026 S-100Z S-100Z: S-100Z 98.9 2.4E-09 5.2E-14 79.3 5.9 65 266-330 9-77 (93)
41 cd00052 EH Eps15 homology doma 98.9 7.6E-09 1.6E-13 71.7 7.0 60 270-334 2-61 (67)
42 cd05029 S-100A6 S-100A6: S-100 98.9 5E-09 1.1E-13 76.5 5.9 69 266-341 9-82 (88)
43 cd05026 S-100Z S-100Z: S-100Z 98.9 8.6E-09 1.9E-13 76.3 7.2 67 103-170 10-83 (93)
44 cd05025 S-100A1 S-100A1: S-100 98.8 6.2E-09 1.4E-13 77.1 5.5 65 266-330 8-76 (92)
45 cd05031 S-100A10_like S-100A10 98.8 9.3E-09 2E-13 76.4 6.1 65 266-330 7-75 (94)
46 KOG0038 Ca2+-binding kinase in 98.8 3.9E-08 8.4E-13 75.8 8.9 103 141-248 72-176 (189)
47 cd05031 S-100A10_like S-100A10 98.8 1.9E-08 4.2E-13 74.7 7.2 67 102-169 7-80 (94)
48 cd05029 S-100A6 S-100A6: S-100 98.8 1.4E-08 3E-13 74.1 6.2 66 103-169 10-80 (88)
49 smart00027 EH Eps15 homology d 98.8 1.7E-08 3.6E-13 75.4 6.7 65 102-169 9-73 (96)
50 KOG0377 Protein serine/threoni 98.8 3.3E-08 7.2E-13 89.5 9.6 145 103-250 464-616 (631)
51 cd05025 S-100A1 S-100A1: S-100 98.8 2.2E-08 4.7E-13 74.1 7.0 68 102-170 8-82 (92)
52 cd05023 S-100A11 S-100A11: S-1 98.8 1.2E-08 2.7E-13 74.5 5.5 73 265-341 7-83 (89)
53 cd00052 EH Eps15 homology doma 98.8 1.7E-08 3.7E-13 69.8 5.9 61 106-169 2-62 (67)
54 KOG4251 Calcium binding protei 98.7 5.6E-08 1.2E-12 81.5 9.2 179 140-330 101-305 (362)
55 cd00252 SPARC_EC SPARC_EC; ext 98.7 3.1E-08 6.7E-13 75.9 7.0 59 265-330 46-104 (116)
56 smart00027 EH Eps15 homology d 98.7 3.8E-08 8.3E-13 73.4 7.2 71 177-252 5-75 (96)
57 PF13833 EF-hand_8: EF-hand do 98.7 2.8E-08 6E-13 65.7 5.5 52 117-168 1-53 (54)
58 PF13833 EF-hand_8: EF-hand do 98.7 2.3E-08 5.1E-13 66.0 5.0 49 280-331 1-50 (54)
59 cd05023 S-100A11 S-100A11: S-1 98.7 4.3E-08 9.3E-13 71.7 6.9 67 102-169 8-81 (89)
60 cd00213 S-100 S-100: S-100 dom 98.7 6.8E-08 1.5E-12 70.9 7.3 67 102-169 7-80 (88)
61 cd00051 EFh EF-hand, calcium b 98.6 1.3E-07 2.7E-12 63.9 7.1 59 269-330 2-60 (63)
62 cd00252 SPARC_EC SPARC_EC; ext 98.6 1E-07 2.2E-12 73.1 6.9 62 101-167 46-107 (116)
63 cd00213 S-100 S-100: S-100 dom 98.6 1.3E-07 2.8E-12 69.4 6.9 73 179-251 5-81 (88)
64 cd00051 EFh EF-hand, calcium b 98.6 1.3E-07 2.9E-12 63.7 6.6 61 105-166 2-62 (63)
65 KOG0751 Mitochondrial aspartat 98.6 1.5E-06 3.3E-11 80.1 14.7 198 110-330 81-310 (694)
66 PF14658 EF-hand_9: EF-hand do 98.5 3.3E-07 7.1E-12 61.7 5.8 64 271-336 2-66 (66)
67 KOG2562 Protein phosphatase 2 98.5 2.2E-06 4.8E-11 78.7 12.6 207 106-330 142-375 (493)
68 cd05030 calgranulins Calgranul 98.4 1.3E-06 2.7E-11 63.9 7.2 68 102-169 7-80 (88)
69 cd05030 calgranulins Calgranul 98.4 1.2E-06 2.7E-11 64.0 6.6 71 180-252 6-82 (88)
70 KOG0041 Predicted Ca2+-binding 98.4 1.6E-06 3.5E-11 70.7 7.7 64 265-331 97-160 (244)
71 PF14658 EF-hand_9: EF-hand do 98.4 1.4E-06 3E-11 58.7 6.0 61 107-168 2-64 (66)
72 KOG0040 Ca2+-binding actin-bun 98.3 5.2E-06 1.1E-10 85.3 12.4 135 102-248 2252-2397(2399)
73 KOG0040 Ca2+-binding actin-bun 98.3 4.9E-06 1.1E-10 85.4 11.3 138 175-332 2246-2396(2399)
74 KOG0041 Predicted Ca2+-binding 98.3 5.4E-06 1.2E-10 67.7 8.3 67 103-170 99-165 (244)
75 PF00036 EF-hand_1: EF hand; 98.3 1E-06 2.2E-11 49.6 3.0 28 269-296 2-29 (29)
76 cd05024 S-100A10 S-100A10: A s 98.2 6.5E-06 1.4E-10 59.6 6.9 66 103-170 8-78 (91)
77 cd05024 S-100A10 S-100A10: A s 98.1 6.4E-06 1.4E-10 59.6 5.4 71 266-341 7-79 (91)
78 PF00036 EF-hand_1: EF hand; 98.1 3.7E-06 8.1E-11 47.3 2.7 26 105-131 2-27 (29)
79 PF13405 EF-hand_6: EF-hand do 98.0 7.4E-06 1.6E-10 47.1 3.0 29 269-297 2-31 (31)
80 PF13405 EF-hand_6: EF-hand do 97.9 8.8E-06 1.9E-10 46.8 2.6 27 104-131 1-27 (31)
81 KOG1029 Endocytic adaptor prot 97.9 5.4E-05 1.2E-09 73.5 9.2 126 116-248 27-256 (1118)
82 PF14788 EF-hand_10: EF hand; 97.9 2.4E-05 5.2E-10 49.6 4.5 47 284-337 2-48 (51)
83 PF12763 EF-hand_4: Cytoskelet 97.9 3E-05 6.5E-10 58.2 5.9 69 176-250 4-72 (104)
84 PF12763 EF-hand_4: Cytoskelet 97.9 4.5E-05 9.8E-10 57.2 6.4 64 102-169 9-72 (104)
85 PF13202 EF-hand_5: EF hand; P 97.8 2E-05 4.4E-10 42.7 2.6 23 270-292 2-24 (25)
86 PF10591 SPARC_Ca_bdg: Secrete 97.8 9.6E-06 2.1E-10 62.1 1.2 61 265-330 52-112 (113)
87 KOG4666 Predicted phosphate ac 97.7 4.6E-05 1E-09 67.0 5.4 119 193-331 238-356 (412)
88 PRK12309 transaldolase/EF-hand 97.7 0.00015 3.3E-09 67.6 8.8 51 265-331 332-382 (391)
89 PF13202 EF-hand_5: EF hand; P 97.7 2.6E-05 5.7E-10 42.2 2.3 23 106-129 2-24 (25)
90 KOG0169 Phosphoinositide-speci 97.6 0.00089 1.9E-08 65.7 12.5 142 179-342 133-278 (746)
91 PRK12309 transaldolase/EF-hand 97.6 0.00013 2.8E-09 68.0 6.3 55 100-168 331-385 (391)
92 PF10591 SPARC_Ca_bdg: Secrete 97.5 0.0006 1.3E-08 52.2 8.4 59 182-245 54-112 (113)
93 KOG1029 Endocytic adaptor prot 97.5 0.0009 1.9E-08 65.3 11.0 139 185-334 19-257 (1118)
94 KOG4666 Predicted phosphate ac 97.5 6.3E-05 1.4E-09 66.1 3.0 119 117-248 240-358 (412)
95 KOG0998 Synaptic vesicle prote 97.5 0.0001 2.3E-09 75.4 5.1 218 104-335 12-346 (847)
96 PF14788 EF-hand_10: EF hand; 97.3 0.00087 1.9E-08 42.6 5.1 48 121-168 2-49 (51)
97 KOG0169 Phosphoinositide-speci 97.2 0.0033 7.1E-08 61.9 11.4 138 100-249 133-274 (746)
98 KOG0046 Ca2+-binding actin-bun 97.2 0.00078 1.7E-08 63.1 6.5 77 174-251 11-87 (627)
99 KOG4065 Uncharacterized conser 97.1 0.0064 1.4E-07 45.4 9.3 58 107-165 71-142 (144)
100 KOG0046 Ca2+-binding actin-bun 97.1 0.0011 2.4E-08 62.2 6.5 68 266-334 18-85 (627)
101 KOG1707 Predicted Ras related/ 96.9 0.0041 8.9E-08 59.6 7.9 156 174-334 187-377 (625)
102 KOG4065 Uncharacterized conser 96.7 0.0041 9E-08 46.4 5.2 60 271-330 71-141 (144)
103 PF09279 EF-hand_like: Phospho 96.5 0.006 1.3E-07 43.9 5.0 68 269-342 2-73 (83)
104 smart00054 EFh EF-hand, calciu 96.3 0.0064 1.4E-07 33.1 3.3 27 269-295 2-28 (29)
105 smart00054 EFh EF-hand, calciu 95.9 0.0077 1.7E-07 32.7 2.4 26 105-131 2-27 (29)
106 KOG1707 Predicted Ras related/ 95.3 0.099 2.1E-06 50.5 8.8 142 101-248 193-376 (625)
107 KOG4578 Uncharacterized conser 94.7 0.02 4.4E-07 50.8 2.3 61 268-330 334-394 (421)
108 PF05042 Caleosin: Caleosin re 94.7 0.25 5.5E-06 40.2 8.3 103 105-209 9-165 (174)
109 KOG3555 Ca2+-binding proteogly 94.6 0.063 1.4E-06 48.1 5.0 101 182-296 211-311 (434)
110 PF09279 EF-hand_like: Phospho 94.4 0.061 1.3E-06 38.6 3.9 64 184-249 2-69 (83)
111 KOG0998 Synaptic vesicle prote 94.1 0.043 9.3E-07 56.7 3.5 143 101-252 127-348 (847)
112 PF05042 Caleosin: Caleosin re 94.1 0.23 4.9E-06 40.5 6.8 145 183-332 8-164 (174)
113 KOG1955 Ral-GTPase effector RA 93.7 0.1 2.2E-06 49.0 4.7 66 267-337 231-296 (737)
114 KOG1955 Ral-GTPase effector RA 93.4 0.15 3.3E-06 47.9 5.3 68 177-249 226-293 (737)
115 KOG3866 DNA-binding protein of 92.7 0.19 4.1E-06 44.4 4.6 66 268-333 245-323 (442)
116 KOG3555 Ca2+-binding proteogly 92.6 0.18 3.8E-06 45.3 4.4 54 187-247 255-308 (434)
117 KOG0035 Ca2+-binding actin-bun 92.3 1.3 2.9E-05 45.3 10.6 134 100-247 744-884 (890)
118 PLN02952 phosphoinositide phos 92.0 1.2 2.5E-05 44.2 9.6 91 234-338 13-110 (599)
119 KOG0035 Ca2+-binding actin-bun 91.4 0.75 1.6E-05 47.0 7.7 105 177-291 742-848 (890)
120 KOG4578 Uncharacterized conser 90.8 0.11 2.4E-06 46.3 1.1 60 185-249 336-398 (421)
121 KOG2243 Ca2+ release channel ( 90.5 0.48 1E-05 50.0 5.4 58 271-332 4061-4118(5019)
122 KOG3866 DNA-binding protein of 89.8 0.49 1.1E-05 41.9 4.3 62 107-169 248-325 (442)
123 KOG4004 Matricellular protein 89.2 0.15 3.2E-06 42.2 0.6 59 108-168 192-250 (259)
124 PF08726 EFhand_Ca_insen: Ca2+ 89.1 0.2 4.3E-06 34.4 1.1 57 265-332 4-67 (69)
125 KOG0042 Glycerol-3-phosphate d 87.4 0.85 1.8E-05 44.1 4.4 69 103-172 593-661 (680)
126 PF08976 DUF1880: Domain of un 87.2 0.43 9.3E-06 36.0 1.9 32 302-333 3-34 (118)
127 PLN02952 phosphoinositide phos 87.0 2.7 5.8E-05 41.7 7.8 91 153-249 13-110 (599)
128 PF08726 EFhand_Ca_insen: Ca2+ 86.7 1.5 3.3E-05 30.1 4.3 55 181-246 5-66 (69)
129 PF05517 p25-alpha: p25-alpha 86.2 2.3 5.1E-05 34.4 5.9 64 271-334 6-69 (154)
130 KOG4347 GTPase-activating prot 85.1 1.6 3.5E-05 42.8 5.2 58 140-204 555-612 (671)
131 KOG0042 Glycerol-3-phosphate d 82.6 1.6 3.4E-05 42.3 3.9 72 177-251 588-659 (680)
132 PF05517 p25-alpha: p25-alpha 82.6 3.8 8.3E-05 33.1 5.7 64 187-250 7-70 (154)
133 KOG4004 Matricellular protein 82.3 0.69 1.5E-05 38.3 1.3 65 270-343 190-255 (259)
134 KOG2243 Ca2+ release channel ( 80.8 2.6 5.7E-05 44.9 4.9 58 187-248 4062-4119(5019)
135 KOG4347 GTPase-activating prot 80.7 3.6 7.9E-05 40.5 5.7 61 218-289 552-612 (671)
136 KOG0033 Ca2+/calmodulin-depend 77.0 1.2 2.5E-05 38.9 1.1 22 8-29 194-215 (355)
137 PF09069 EF-hand_3: EF-hand; 76.2 16 0.00034 26.6 6.6 66 267-339 3-76 (90)
138 PF09069 EF-hand_3: EF-hand; 74.8 23 0.0005 25.7 7.1 63 102-168 2-75 (90)
139 PF15144 DUF4576: Domain of un 73.8 5.8 0.00013 27.5 3.6 23 1-23 1-23 (88)
140 KOG1265 Phospholipase C [Lipid 72.9 45 0.00099 34.6 10.8 71 265-339 219-300 (1189)
141 cd07313 terB_like_2 tellurium 69.8 26 0.00056 25.8 6.9 83 117-206 12-96 (104)
142 PF00404 Dockerin_1: Dockerin 68.2 8.1 0.00018 19.7 2.5 16 277-292 1-16 (21)
143 PF07406 NICE-3: NICE-3 protei 66.1 37 0.0008 28.4 7.5 62 104-167 109-181 (186)
144 PF07172 GRP: Glycine rich pro 66.1 6.4 0.00014 29.0 2.7 18 2-19 3-20 (95)
145 PLN02222 phosphoinositide phos 63.1 36 0.00077 33.9 8.0 69 265-340 23-92 (581)
146 PF08976 DUF1880: Domain of un 60.5 8.3 0.00018 29.3 2.4 32 137-168 4-35 (118)
147 PLN02230 phosphoinositide phos 59.4 50 0.0011 33.0 8.3 70 265-339 27-103 (598)
148 PLN02228 Phosphoinositide phos 57.7 45 0.00097 33.1 7.6 69 265-340 22-94 (567)
149 PF12174 RST: RCD1-SRO-TAF4 (R 57.1 21 0.00046 24.5 3.8 51 281-337 6-56 (70)
150 PF02532 PsbI: Photosystem II 57.0 25 0.00054 20.4 3.4 24 3-26 5-29 (36)
151 KOG4403 Cell surface glycoprot 56.7 63 0.0014 30.5 7.8 89 194-295 40-129 (575)
152 KOG1954 Endocytosis/signaling 52.8 17 0.00037 33.7 3.6 57 105-165 446-502 (532)
153 KOG0604 MAP kinase-activated p 51.5 8.5 0.00018 34.7 1.4 24 8-31 245-268 (400)
154 KOG4286 Dystrophin-like protei 45.8 2.6E+02 0.0056 28.8 10.5 131 105-247 422-578 (966)
155 KOG0607 MAP kinase-interacting 44.9 19 0.00042 32.9 2.6 21 9-29 274-294 (463)
156 cd07313 terB_like_2 tellurium 44.4 24 0.00053 26.0 2.9 52 281-333 13-64 (104)
157 PRK11875 psbT photosystem II r 43.1 56 0.0012 18.3 3.3 17 10-26 12-28 (31)
158 KOG3449 60S acidic ribosomal p 42.5 1.5E+02 0.0032 22.4 6.8 64 270-341 4-67 (112)
159 CHL00031 psbT photosystem II p 41.8 52 0.0011 18.8 3.1 19 10-28 12-30 (33)
160 CHL00020 psbN photosystem II p 41.0 42 0.00092 20.5 2.9 29 1-29 1-30 (43)
161 PRK02655 psbI photosystem II r 40.7 28 0.00062 20.4 2.0 24 3-26 5-29 (38)
162 CHL00024 psbI photosystem II p 39.9 31 0.00068 20.0 2.1 17 3-19 5-21 (36)
163 PF08414 NADPH_Ox: Respiratory 39.5 58 0.0013 24.1 3.9 57 265-330 28-88 (100)
164 KOG0615 Serine/threonine prote 39.3 2.8 6E-05 39.3 -3.5 67 8-74 363-444 (475)
165 KOG1264 Phospholipase C [Lipid 39.1 1.1E+02 0.0023 31.8 6.9 145 101-250 142-294 (1267)
166 PLN02223 phosphoinositide phos 39.1 1E+02 0.0022 30.4 6.7 69 265-339 14-93 (537)
167 PF12273 RCR: Chitin synthesis 39.0 21 0.00045 27.9 1.8 8 8-15 7-14 (130)
168 PF09068 EF-hand_2: EF hand; 39.0 71 0.0015 24.9 4.7 27 269-295 99-125 (127)
169 PRK13183 psbN photosystem II r 38.6 55 0.0012 20.3 3.1 29 1-29 4-33 (46)
170 KOG1264 Phospholipase C [Lipid 38.4 1.9E+02 0.004 30.2 8.4 140 181-330 143-289 (1267)
171 PF14513 DAG_kinase_N: Diacylg 38.3 39 0.00085 26.7 3.2 54 281-339 5-65 (138)
172 PF12419 DUF3670: SNF2 Helicas 36.4 49 0.0011 26.2 3.6 51 280-330 80-137 (141)
173 PF07499 RuvA_C: RuvA, C-termi 36.2 1E+02 0.0022 19.1 4.3 39 287-332 4-42 (47)
174 PLN02230 phosphoinositide phos 36.1 89 0.0019 31.3 6.0 68 181-249 28-102 (598)
175 PF08414 NADPH_Ox: Respiratory 35.9 1.8E+02 0.0039 21.5 6.1 64 182-250 30-93 (100)
176 KOG1954 Endocytosis/signaling 32.4 51 0.0011 30.8 3.4 59 267-331 444-502 (532)
177 KOG4403 Cell surface glycoprot 32.3 1E+02 0.0023 29.1 5.3 58 152-211 40-97 (575)
178 KOG4112 Signal peptidase subun 32.3 53 0.0012 23.8 2.7 26 4-29 51-76 (101)
179 PF01023 S_100: S-100/ICaBP ty 32.0 58 0.0013 20.0 2.6 30 104-133 7-37 (44)
180 PF01405 PsbT: Photosystem II 31.3 89 0.0019 17.3 2.9 16 10-25 12-27 (29)
181 KOG1785 Tyrosine kinase negati 30.5 4.7E+02 0.01 24.7 11.9 86 195-296 187-275 (563)
182 PF03979 Sigma70_r1_1: Sigma-7 29.2 71 0.0015 22.6 3.1 35 280-319 18-52 (82)
183 COG4103 Uncharacterized protei 29.0 2.6E+02 0.0057 22.2 6.3 89 107-205 34-124 (148)
184 KOG2871 Uncharacterized conser 28.7 42 0.00091 31.1 2.2 64 264-330 306-370 (449)
185 PLN02222 phosphoinositide phos 26.8 1.3E+02 0.0029 30.0 5.4 65 182-249 25-90 (581)
186 PF12174 RST: RCD1-SRO-TAF4 (R 26.7 2.2E+02 0.0047 19.6 5.6 50 235-297 6-55 (70)
187 PF14513 DAG_kinase_N: Diacylg 26.0 3.3E+02 0.0071 21.6 6.5 34 280-315 45-78 (138)
188 PF05099 TerB: Tellurite resis 25.9 1.5E+02 0.0032 23.0 4.7 90 105-203 26-117 (140)
189 PF09068 EF-hand_2: EF hand; 24.8 3.3E+02 0.0072 21.1 9.2 94 155-248 13-124 (127)
190 KOG2871 Uncharacterized conser 24.2 54 0.0012 30.4 2.0 67 101-168 307-374 (449)
191 PF02761 Cbl_N2: CBL proto-onc 23.7 2.8E+02 0.0062 19.9 5.7 50 118-167 20-69 (85)
192 PF05434 Tmemb_9: TMEM9; Inte 23.5 24 0.00052 28.1 -0.3 18 4-21 57-74 (149)
193 PF08461 HTH_12: Ribonuclease 23.4 1.6E+02 0.0034 19.9 3.8 37 117-153 10-46 (66)
194 PHA02291 hypothetical protein 22.7 80 0.0017 23.5 2.3 23 4-26 6-28 (132)
195 KOG0583 Serine/threonine prote 22.6 64 0.0014 30.3 2.3 22 8-29 205-226 (370)
196 PRK14748 kdpF potassium-transp 22.4 1.4E+02 0.003 16.5 2.6 18 1-18 1-18 (29)
197 PRK14750 kdpF potassium-transp 22.4 1.4E+02 0.0031 16.4 2.6 20 1-20 1-20 (29)
198 PF02402 Lysis_col: Lysis prot 22.3 42 0.00092 20.6 0.7 22 1-22 1-22 (46)
199 KOG0603 Ribosomal protein S6 k 22.0 1.3E+02 0.0029 30.0 4.3 32 9-41 496-528 (612)
200 PLN02228 Phosphoinositide phos 21.9 2.7E+02 0.0059 27.8 6.5 65 102-169 23-93 (567)
201 PHA00003 B internal scaffoldin 21.6 51 0.0011 24.5 1.1 56 46-129 48-109 (120)
202 PHA02105 hypothetical protein 20.8 1.5E+02 0.0032 19.4 3.0 49 198-246 4-54 (68)
203 PRK09510 tolA cell envelope in 20.5 2.1E+02 0.0045 27.0 5.1 19 45-63 52-72 (387)
204 PF11848 DUF3368: Domain of un 20.3 1.1E+02 0.0023 19.1 2.3 32 281-314 15-46 (48)
No 1
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.3e-39 Score=279.04 Aligned_cols=260 Identities=32% Similarity=0.514 Sum_probs=221.3
Q ss_pred CCCCccchhhhcccCccccccHHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeH
Q 048599 80 SYDNEDFEDEYDFFSENGRLNITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISF 159 (354)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~ 159 (354)
.+.+.++....++|+.++ .+.||..++.++|.+ ++|+|+..||+.|+.....+....++.+.|..+|.|+||.|+|
T Consensus 57 ~~~d~e~~~~fd~l~~ee---~~~rl~~l~~~iD~~-~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~ 132 (325)
T KOG4223|consen 57 FLGDDEFADEFDQLTPEE---SQERLGKLVPKIDSD-SDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITW 132 (325)
T ss_pred cccchhhhhhhhhhCcch---hHHHHHHHHhhhcCC-CCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeH
Confidence 444455555667788877 899999999999988 9999999999999999988888899999999999999999999
Q ss_pred HhHHHHhhhhh--------hhhcccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhc
Q 048599 160 YEYLPQFSKQD--------IEKNGMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMD 231 (354)
Q Consensus 160 ~EF~~~~~~~~--------~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D 231 (354)
+||+..+.... ..........+.+.++.|++.|.|++|.+|++||..+|++... +.|....|.+-+..+|
T Consensus 133 eey~~~~~~~~~~~~~~~d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~--p~M~~iVi~Etl~d~D 210 (325)
T KOG4223|consen 133 EEYLPQTYGRVDLPDEFPDEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEH--PHMKDIVIAETLEDID 210 (325)
T ss_pred HHhhhhhhhcccCccccccchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhc--chHHHHHHHHHHhhcc
Confidence 99999888532 1112233345667788999999999999999999999999875 8899999999999999
Q ss_pred CCCCCCeeHHHHHHHHHHHhhhcccccCCCCCCCch-hHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHH
Q 048599 232 DDNDGKLNLDEFLENTYRTYKSYAEFEDDGDGTDFP-SAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRH 310 (354)
Q Consensus 232 ~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~ 310 (354)
+|+||+|+++||+.-+..... ....+.+.. .-.+.|...|+|+||+|+.+|++++ +.|++...++.++.+
T Consensus 211 kn~DG~I~~eEfigd~~~~~~------~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~W---I~P~~~d~A~~EA~h 281 (325)
T KOG4223|consen 211 KNGDGKISLEEFIGDLYSHEG------NEEEPEWVLTEREQFFEFRDKNKDGKLDGDELLDW---ILPSEQDHAKAEARH 281 (325)
T ss_pred cCCCCceeHHHHHhHHhhccC------CCCCcccccccHHHHHHHhhcCCCCccCHHHHhcc---cCCCCccHHHHHHHH
Confidence 999999999999999886654 111222333 3445556679999999999999976 577888899999999
Q ss_pred HHHHhccCCCCCccHHHHHhcHhhhhccccCCCCCCCcccccCC
Q 048599 311 LIHEADDNRDGNLTLDEMLNHEYIFYNTVYNDVDDDDYDFRDEL 354 (354)
Q Consensus 311 l~~~~D~~~dG~Is~~EF~~~~~~f~~~~~~~~~~~~~~~~de~ 354 (354)
|+...|.|+||+||++|++.+++.||+|++++++++...+||||
T Consensus 282 L~~eaD~dkD~kLs~eEIl~~~d~FvgSqAtdyge~L~~~HDEl 325 (325)
T KOG4223|consen 282 LLHEADEDKDGKLSKEEILEHYDVFVGSQATDYGEDLDYFHDEL 325 (325)
T ss_pred HhhhhccCccccccHHHHhhCcceeeeeecccchhhcccccCCC
Confidence 99999999999999999999999999999999987766779997
No 2
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.89 E-value=2.8e-22 Score=159.86 Aligned_cols=141 Identities=21% Similarity=0.304 Sum_probs=127.0
Q ss_pred ccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhc
Q 048599 175 GMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSY 254 (354)
Q Consensus 175 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~ 254 (354)
+.+..++..|+++|..+|+|++|.|+..+|..+++.+|. ..+..++..++..+|. +.+.|+|.+|+..+....+
T Consensus 13 ~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~---~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~-- 86 (160)
T COG5126 13 QLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGF---NPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLK-- 86 (160)
T ss_pred cCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCC---CCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhc--
Confidence 456677899999999999999999999999999998875 3566789999999999 9999999999999887765
Q ss_pred ccccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhc
Q 048599 255 AEFEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNH 331 (354)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~ 331 (354)
.....+.++.+|+.||+|++|+|+..||+.+++.+| ..+++++++.++..+|.|+||.|+|++|++.
T Consensus 87 -------~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lg---e~~~deev~~ll~~~d~d~dG~i~~~eF~~~ 153 (160)
T COG5126 87 -------RGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLG---ERLSDEEVEKLLKEYDEDGDGEIDYEEFKKL 153 (160)
T ss_pred -------cCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhc---ccCCHHHHHHHHHhcCCCCCceEeHHHHHHH
Confidence 233688999999999999999999999999999886 5589999999999999999999999999993
No 3
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.88 E-value=9.6e-22 Score=156.78 Aligned_cols=137 Identities=23% Similarity=0.327 Sum_probs=126.3
Q ss_pred HHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccchH
Q 048599 102 TSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQA 181 (354)
Q Consensus 102 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~ 181 (354)
.++++++|..+|.+ ++|.|+..||..+++.++..++..++.+++..+|. +.|.|+|.+|+.++..... .....
T Consensus 19 i~~lkeaF~l~D~d-~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~-----~~~~~ 91 (160)
T COG5126 19 IQELKEAFQLFDRD-SDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLK-----RGDKE 91 (160)
T ss_pred HHHHHHHHHHhCcC-CCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhc-----cCCcH
Confidence 67799999999999 99999999999999999999999999999999999 9999999999999988543 22345
Q ss_pred hHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 182 GWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 182 ~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
+.++.+|+.||.|++|+|+..++..+|..+| ..+++++++.+++.+|.+++|.|+|++|++.+.
T Consensus 92 Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lg---e~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~ 155 (160)
T COG5126 92 EELREAFKLFDKDHDGYISIGELRRVLKSLG---ERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIK 155 (160)
T ss_pred HHHHHHHHHhCCCCCceecHHHHHHHHHhhc---ccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHh
Confidence 6789999999999999999999999999888 578889999999999999999999999999765
No 4
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.87 E-value=4.4e-21 Score=156.24 Aligned_cols=141 Identities=23% Similarity=0.355 Sum_probs=123.2
Q ss_pred chHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhccccc
Q 048599 179 GQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFE 258 (354)
Q Consensus 179 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~ 258 (354)
.....++.+|+.+|++++|+|+..||..+++.+|. ..+..++..++...|.+++|.|++.+|+.++...........
T Consensus 5 ~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~---~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~ 81 (151)
T KOG0027|consen 5 EQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQ---NPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE 81 (151)
T ss_pred HHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCC---CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence 44677899999999999999999999999999985 456778999999999999999999999998876554222110
Q ss_pred CCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 259 DDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 259 ~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
.....++++|+.||+|++|+||..||+.+|..+| ...+.++++.+++.+|.|+||.|+|+||++
T Consensus 82 -----~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg---~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~ 145 (151)
T KOG0027|consen 82 -----ASSEELKEAFRVFDKDGDGFISASELKKVLTSLG---EKLTDEECKEMIREVDVDGDGKVNFEEFVK 145 (151)
T ss_pred -----ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC---CcCCHHHHHHHHHhcCCCCCCeEeHHHHHH
Confidence 1345899999999999999999999999999997 447799999999999999999999999998
No 5
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.86 E-value=4.5e-21 Score=156.20 Aligned_cols=142 Identities=28% Similarity=0.358 Sum_probs=126.1
Q ss_pred HHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccchH
Q 048599 102 TSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQA 181 (354)
Q Consensus 102 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~ 181 (354)
...++.+|..+|++ ++|+|+..||..+++.++..++..++..++..+|.+++|.|++.||+.++........... ...
T Consensus 7 ~~el~~~F~~fD~d-~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~-~~~ 84 (151)
T KOG0027|consen 7 ILELKEAFQLFDKD-GDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE-ASS 84 (151)
T ss_pred HHHHHHHHHHHCCC-CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc-ccH
Confidence 45699999999999 9999999999999999999999999999999999999999999999999887543321100 234
Q ss_pred hHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 182 GWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 182 ~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
..++++|+.||+|++|+||..||+.+|..+|. +.+.+++..+++..|.|+||.|+|.+|+.++.
T Consensus 85 ~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~---~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 85 EELKEAFRVFDKDGDGFISASELKKVLTSLGE---KLTDEECKEMIREVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred HHHHHHHHHHccCCCCcCcHHHHHHHHHHhCC---cCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence 57999999999999999999999999999984 56688999999999999999999999999775
No 6
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.82 E-value=1.4e-19 Score=148.50 Aligned_cols=152 Identities=20% Similarity=0.327 Sum_probs=133.5
Q ss_pred HHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhc-HHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccchH
Q 048599 103 SRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRL-SYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQA 181 (354)
Q Consensus 103 ~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~-~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~ 181 (354)
..+...|...|++ +.|+|+.+||+++|......+- .+.+.-++..+|.+++|+|+++||..++.. +
T Consensus 57 ~~~~~~f~~vD~d-~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~------------i 123 (221)
T KOG0037|consen 57 PQLAGWFQSVDRD-RSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKY------------I 123 (221)
T ss_pred HHHHHHHHhhCcc-ccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH------------H
Confidence 3588999999999 9999999999999875554443 455566679999999999999999999887 6
Q ss_pred hHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhcccccCCC
Q 048599 182 GWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFEDDG 261 (354)
Q Consensus 182 ~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~ 261 (354)
..|+.+|+.+|+|++|.|+..||+++|..+|. .++....+.+++.+|..++|.|.|++|++++.
T Consensus 124 ~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy---~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv------------- 187 (221)
T KOG0037|consen 124 NQWRNVFRTYDRDRSGTIDSSELRQALTQLGY---RLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCV------------- 187 (221)
T ss_pred HHHHHHHHhcccCCCCcccHHHHHHHHHHcCc---CCCHHHHHHHHHHhccccCCceeHHHHHHHHH-------------
Confidence 78999999999999999999999999999995 56777888999999988899999999999988
Q ss_pred CCCCchhHHHHHHhhcCCCCCCcCH
Q 048599 262 DGTDFPSAEETFVELDTNKDKLLEV 286 (354)
Q Consensus 262 ~~~~~~~~~~~F~~~D~d~dG~Is~ 286 (354)
....+.++|+.+|++.+|.|+.
T Consensus 188 ---~L~~lt~~Fr~~D~~q~G~i~~ 209 (221)
T KOG0037|consen 188 ---VLQRLTEAFRRRDTAQQGSITI 209 (221)
T ss_pred ---HHHHHHHHHHHhccccceeEEE
Confidence 5556889999999999997754
No 7
>PTZ00183 centrin; Provisional
Probab=99.78 E-value=5.7e-18 Score=139.22 Aligned_cols=141 Identities=22% Similarity=0.336 Sum_probs=120.7
Q ss_pred ccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhc
Q 048599 175 GMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSY 254 (354)
Q Consensus 175 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~ 254 (354)
........++..+|..+|.+++|.|+..||..++...+. ......+..++..+|.+++|.|+|.+|+..+.....
T Consensus 10 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~---~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~-- 84 (158)
T PTZ00183 10 GLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGF---EPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLG-- 84 (158)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCC---CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhc--
Confidence 344556778999999999999999999999999987764 234557899999999999999999999987765432
Q ss_pred ccccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 255 AEFEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
.......++.+|+.+|++++|+|+..||..++..++ ..++..++..++..+|.|++|.|++++|+.
T Consensus 85 -------~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~---~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~ 150 (158)
T PTZ00183 85 -------ERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELG---ETITDEELQEMIDEADRNGDGEISEEEFYR 150 (158)
T ss_pred -------CCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC---CCCCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 112456789999999999999999999999999885 348899999999999999999999999998
No 8
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=4.2e-18 Score=132.55 Aligned_cols=139 Identities=21% Similarity=0.266 Sum_probs=127.3
Q ss_pred HHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccch
Q 048599 101 ITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQ 180 (354)
Q Consensus 101 ~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~ 180 (354)
.++.++..|..+|.+ ++|+|+..||+.+++++|..+...++.+++..+|+++.|.|+|++|+..+....... ..
T Consensus 31 q~q~i~e~f~lfd~~-~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~-----dt 104 (172)
T KOG0028|consen 31 QKQEIKEAFELFDPD-MAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGER-----DT 104 (172)
T ss_pred HHhhHHHHHHhhccC-CCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhcc-----Cc
Confidence 467799999999999 999999999999999999999999999999999999999999999999988754332 34
Q ss_pred HhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 181 AGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 181 ~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
...++.+|+.+|.|++|.||..+|+.+...+| +.++++++.+++..+|.+++|.|+-+||...+.
T Consensus 105 ~eEi~~afrl~D~D~~Gkis~~~lkrvakeLg---enltD~El~eMIeEAd~d~dgevneeEF~~imk 169 (172)
T KOG0028|consen 105 KEEIKKAFRLFDDDKTGKISQRNLKRVAKELG---ENLTDEELMEMIEEADRDGDGEVNEEEFIRIMK 169 (172)
T ss_pred HHHHHHHHHcccccCCCCcCHHHHHHHHHHhC---ccccHHHHHHHHHHhcccccccccHHHHHHHHh
Confidence 56789999999999999999999999999998 678999999999999999999999999988765
No 9
>PTZ00184 calmodulin; Provisional
Probab=99.77 E-value=6.5e-18 Score=137.36 Aligned_cols=139 Identities=22% Similarity=0.356 Sum_probs=118.2
Q ss_pred ccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhccc
Q 048599 177 VHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAE 256 (354)
Q Consensus 177 ~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~ 256 (354)
+......++..|..+|.+++|.|+.+||..++...+. ......+..++..+|.+++|.|+|++|+..+......
T Consensus 6 ~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~---~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~--- 79 (149)
T PTZ00184 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKD--- 79 (149)
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCC---CCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccC---
Confidence 3345677889999999999999999999999977653 2335678999999999999999999999887654321
Q ss_pred ccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 257 FEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 257 ~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
......+..+|+.+|.+++|+|+.+|+..++..++ ..++.+++..++..+|.+++|.|+|+||+.
T Consensus 80 ------~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~---~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~ 144 (149)
T PTZ00184 80 ------TDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLG---EKLTDEEVDEMIREADVDGDGQINYEEFVK 144 (149)
T ss_pred ------CcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHC---CCCCHHHHHHHHHhcCCCCCCcCcHHHHHH
Confidence 11445788999999999999999999999999886 347789999999999999999999999998
No 10
>PTZ00183 centrin; Provisional
Probab=99.77 E-value=1e-17 Score=137.69 Aligned_cols=138 Identities=22% Similarity=0.298 Sum_probs=119.7
Q ss_pred HHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccchH
Q 048599 102 TSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQA 181 (354)
Q Consensus 102 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~ 181 (354)
..++..+|..+|.+ ++|.|+..||..++..++.......+..+|..+|.+++|.|+|.||+..+...... ....
T Consensus 16 ~~~~~~~F~~~D~~-~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~-----~~~~ 89 (158)
T PTZ00183 16 KKEIREAFDLFDTD-GSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGE-----RDPR 89 (158)
T ss_pred HHHHHHHHHHhCCC-CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcC-----CCcH
Confidence 45699999999999 99999999999999988877777889999999999999999999999987653211 1123
Q ss_pred hHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 182 GWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 182 ~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
..++.+|+.+|.+++|.|+..||..++...+ +.++...+..++..+|.+++|.|++++|..++.
T Consensus 90 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~---~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 153 (158)
T PTZ00183 90 EEILKAFRLFDDDKTGKISLKNLKRVAKELG---ETITDEELQEMIDEADRNGDGEISEEEFYRIMK 153 (158)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC---CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 4688899999999999999999999998776 356777899999999999999999999988765
No 11
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=1.6e-17 Score=129.40 Aligned_cols=141 Identities=18% Similarity=0.250 Sum_probs=125.7
Q ss_pred ccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhc
Q 048599 175 GMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSY 254 (354)
Q Consensus 175 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~ 254 (354)
.+...+...++.+|..+|.+++|+|+..||+.+++..|. .....++..++..+|.++.|.|+|++|...+...+.
T Consensus 26 ~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGF---E~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~-- 100 (172)
T KOG0028|consen 26 ELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGF---EPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLG-- 100 (172)
T ss_pred cccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCC---CcchHHHHHHHHhhhhccCceechHHHHHHHHHHHh--
Confidence 344455677899999999999999999999999999986 455667899999999999999999999998876665
Q ss_pred ccccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 255 AEFEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
.....+.+..+|+.+|.|++|.||..+|+.+.+.+| .+++++++..++..+|.++||.|+-+||+.
T Consensus 101 -------e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLg---enltD~El~eMIeEAd~d~dgevneeEF~~ 166 (172)
T KOG0028|consen 101 -------ERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELG---ENLTDEELMEMIEEADRDGDGEVNEEEFIR 166 (172)
T ss_pred -------ccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhC---ccccHHHHHHHHHHhcccccccccHHHHHH
Confidence 223778899999999999999999999999999997 459999999999999999999999999988
No 12
>PTZ00184 calmodulin; Provisional
Probab=99.75 E-value=2e-17 Score=134.51 Aligned_cols=138 Identities=25% Similarity=0.362 Sum_probs=118.9
Q ss_pred HHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccchH
Q 048599 102 TSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQA 181 (354)
Q Consensus 102 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~ 181 (354)
.++++..|..+|.+ ++|.|+..||..++..++.......+..+|..+|.+++|.|+|+||+.++...... ....
T Consensus 10 ~~~~~~~F~~~D~~-~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~-----~~~~ 83 (149)
T PTZ00184 10 IAEFKEAFSLFDKD-GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKD-----TDSE 83 (149)
T ss_pred HHHHHHHHHHHcCC-CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccC-----CcHH
Confidence 45699999999999 99999999999999988877777889999999999999999999999987753211 1123
Q ss_pred hHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 182 GWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 182 ~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
..++.+|+.+|.+++|.|+.++|..++...+ +.++...+..++..+|.+++|.|+|.||+.++.
T Consensus 84 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~---~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 84 EEIKEAFKVFDRDGNGFISAAELRHVMTNLG---EKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHHhhCCCCCCeEeHHHHHHHHHHHC---CCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 4578899999999999999999999998765 345667889999999999999999999998764
No 13
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=99.74 E-value=1.2e-17 Score=138.67 Aligned_cols=243 Identities=23% Similarity=0.362 Sum_probs=170.4
Q ss_pred HHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhc---HHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcc--
Q 048599 101 ITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRL---SYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNG-- 175 (354)
Q Consensus 101 ~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~---~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~-- 175 (354)
....|+.+|++.|.| .||+||..|+++|+......+. ..+....|+..|.|+||.|+|+||...+.........
T Consensus 99 srrklmviFsKvDVN-tDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekev 177 (362)
T KOG4251|consen 99 SRRKLMVIFSKVDVN-TDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEV 177 (362)
T ss_pred HHHHHHHHHhhcccC-ccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHH
Confidence 567799999999999 8999999999999876543322 3455566899999999999999999877654321100
Q ss_pred -----c-ccchHhHHHHHHhHhcCCCCCcc---------cHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeH
Q 048599 176 -----M-VHGQAGWWKEQFDNADVDSNGTL---------NFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNL 240 (354)
Q Consensus 176 -----~-~~~~~~~l~~~F~~~D~d~~G~I---------s~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~ 240 (354)
. ..-....=.+.|..-+++..|.. +..||..+|++..+ ..+....++.++..+|.|+|..++.
T Consensus 178 adairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhS--rgmLrfmVkeivrdlDqdgDkqlSv 255 (362)
T KOG4251|consen 178 ADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHS--RGMLRFMVKEIVRDLDQDGDKQLSV 255 (362)
T ss_pred HHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhh--hhhHHHHHHHHHHHhccCCCeeecc
Confidence 0 00001111234444455555554 45999999998764 4556678999999999999999999
Q ss_pred HHHHHHHHHHhhhcccccCCCCCCCchhHHHHHHh-hcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCC
Q 048599 241 DEFLENTYRTYKSYAEFEDDGDGTDFPSAEETFVE-LDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNR 319 (354)
Q Consensus 241 ~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~-~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~ 319 (354)
.+|+.............. ....+.+.-.+-|.. +|.|.||.+|.+||... +.|.+..++-.++..++...|.|+
T Consensus 256 peFislpvGTVenqqgqd--iddnwvkdRkkEFeElIDsNhDGivTaeELe~y---~dP~n~~~alne~~~~ma~~d~n~ 330 (362)
T KOG4251|consen 256 PEFISLPVGTVENQQGQD--IDDNWVKDRKKEFEELIDSNHDGIVTAEELEDY---VDPQNFRLALNEVNDIMALTDANN 330 (362)
T ss_pred hhhhcCCCcchhhhhccc--hHHHHHHHHHHHHHHHhhcCCccceeHHHHHhh---cCchhhhhhHHHHHHHHhhhccCC
Confidence 999987654333221110 011244555566754 79999999999999887 456667788889999999999999
Q ss_pred CCCccHHHHHhcHhhhhccccCCCCCCCcccccCC
Q 048599 320 DGNLTLDEMLNHEYIFYNTVYNDVDDDDYDFRDEL 354 (354)
Q Consensus 320 dG~Is~~EF~~~~~~f~~~~~~~~~~~~~~~~de~ 354 (354)
|.+++.+|.++. .|+-.-++-. ..-.+.|||+
T Consensus 331 ~~~Ls~eell~r--~~~~~rSsLl-sarsSlHdEm 362 (362)
T KOG4251|consen 331 DEKLSLEELLER--DWLLARSSLL-SARSSLHDEM 362 (362)
T ss_pred CcccCHHHHHHH--HhhhcccHHH-HHHHhhhhcC
Confidence 999999999983 3332222221 3344678875
No 14
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.66 E-value=7.6e-16 Score=117.08 Aligned_cols=140 Identities=20% Similarity=0.261 Sum_probs=122.8
Q ss_pred HHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCC--CCCceeHHhHHHHhhhhhhhhccccc
Q 048599 101 ITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRD--GDGEISFYEYLPQFSKQDIEKNGMVH 178 (354)
Q Consensus 101 ~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~--~dG~I~~~EF~~~~~~~~~~~~~~~~ 178 (354)
....++++|..+|+. +||.|+..+...+|+.+|.+++..++.+.+..++.+ +-.+|+|++|+.++......+ ..
T Consensus 9 ~~~e~ke~F~lfD~~-gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk---~q 84 (152)
T KOG0030|consen 9 QMEEFKEAFLLFDRT-GDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNK---DQ 84 (152)
T ss_pred hHHHHHHHHHHHhcc-CcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcc---cc
Confidence 456799999999999 999999999999999999999999999999988877 557899999999988876443 33
Q ss_pred chHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 179 GQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 179 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
...+.+-+-++.||++++|+|...||+.+|..+| ..+++.+++.++.-. .|.+|.|+|+.|++.+.
T Consensus 85 ~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlG---ekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 85 GTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLG---EKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred CcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHH---hhccHHHHHHHHccc-cccCCcCcHHHHHHHHh
Confidence 3456678899999999999999999999999998 689999999998765 47789999999998764
No 15
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.66 E-value=1.8e-15 Score=125.18 Aligned_cols=137 Identities=21% Similarity=0.325 Sum_probs=110.6
Q ss_pred cchHhHHHHHHhHhcCC-CCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCC-eeHHHHHHHHHHHhhhcc
Q 048599 178 HGQAGWWKEQFDNADVD-SNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGK-LNLDEFLENTYRTYKSYA 255 (354)
Q Consensus 178 ~~~~~~l~~~F~~~D~d-~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~-I~~~eF~~~~~~~~~~~~ 255 (354)
..++..+...|..+|.+ ++|+|+.+||..+.... .+| ...+++..++.+++|. |+|++|+..+......
T Consensus 29 ~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~--~Np-----~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~-- 99 (187)
T KOG0034|consen 29 ANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELA--LNP-----LADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPK-- 99 (187)
T ss_pred HHHHHHHHHHHHHhccccccCccCHHHHHHHHHHh--cCc-----HHHHHHHHHhccCCCCccCHHHHHHHHhhhcCC--
Confidence 45677888899999999 99999999999998321 112 4668999999988888 9999999988765431
Q ss_pred cccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHH----HHHHHHHHhccCCCCCccHHHHHh
Q 048599 256 EFEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKY----YSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 256 ~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~----~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
.....+++-+|+.||.+++|+|+.+|+.+++..+.+.....+++ .++.++..+|.++||+||++||.+
T Consensus 100 -------~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~ 171 (187)
T KOG0034|consen 100 -------ASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCK 171 (187)
T ss_pred -------ccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 11345899999999999999999999999999886433221233 377788899999999999999999
No 16
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.66 E-value=1.8e-15 Score=124.55 Aligned_cols=131 Identities=17% Similarity=0.237 Sum_probs=116.4
Q ss_pred HHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhcccccCCCC
Q 048599 183 WWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFEDDGD 262 (354)
Q Consensus 183 ~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~ 262 (354)
.+...|...|+|+.|.|+.+|++++|..... .....+.|..|+..+|.+.+|+|++.||...+.
T Consensus 58 ~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~--~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~-------------- 121 (221)
T KOG0037|consen 58 QLAGWFQSVDRDRSGRILAKELQQALSNGTW--SPFSIETCRLMISMFDRDNSGTIGFKEFKALWK-------------- 121 (221)
T ss_pred HHHHHHHhhCccccccccHHHHHHHhhcCCC--CCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH--------------
Confidence 5677999999999999999999999985543 345666899999999999999999999988665
Q ss_pred CCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhh
Q 048599 263 GTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYI 334 (354)
Q Consensus 263 ~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~ 334 (354)
....++.+|+.+|+|++|.|+..||+++|..+| ..++++..+.|++++|.-+.|.|.+++|++....
T Consensus 122 --~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~G---y~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~ 188 (221)
T KOG0037|consen 122 --YINQWRNVFRTYDRDRSGTIDSSELRQALTQLG---YRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVV 188 (221)
T ss_pred --HHHHHHHHHHhcccCCCCcccHHHHHHHHHHcC---cCCCHHHHHHHHHHhccccCCceeHHHHHHHHHH
Confidence 556789999999999999999999999999997 7799999999999999888999999999985543
No 17
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.63 E-value=1e-14 Score=112.93 Aligned_cols=135 Identities=16% Similarity=0.199 Sum_probs=119.9
Q ss_pred HHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccch
Q 048599 101 ITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQ 180 (354)
Q Consensus 101 ~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~ 180 (354)
..++++++|..+|.| +||+|..++|+..+.++|...+..+++.+++. ..|.|+|.-|+.++....... ..
T Consensus 30 QIqEfKEAF~~mDqn-rDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~gt-----dp 99 (171)
T KOG0031|consen 30 QIQEFKEAFNLMDQN-RDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLNGT-----DP 99 (171)
T ss_pred HHHHHHHHHHHHhcc-CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCC-----CH
Confidence 356799999999999 99999999999999999999888899999875 578999999999988754332 22
Q ss_pred HhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 181 AGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 181 ~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
.+-+..+|+.||.+++|.|..+.|+.+|...| ..+++++++.+++.+-.+..|.++|..|+..+.
T Consensus 100 e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~g---Dr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 100 EEVILNAFKTFDDEGSGKIDEDYLRELLTTMG---DRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHHHHHHHhcCccCCCccCHHHHHHHHHHhc---ccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 45578899999999999999999999999987 678899999999999999999999999988765
No 18
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.63 E-value=8e-15 Score=113.46 Aligned_cols=133 Identities=14% Similarity=0.208 Sum_probs=118.7
Q ss_pred chHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhccccc
Q 048599 179 GQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFE 258 (354)
Q Consensus 179 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~ 258 (354)
.++..++++|..+|.|++|.|+.++|+.++..+|. ..+++++..++.. ..|-|+|--|+.++-..+..-
T Consensus 29 ~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk---~~~d~elDaM~~E----a~gPINft~FLTmfGekL~gt---- 97 (171)
T KOG0031|consen 29 SQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGK---IASDEELDAMMKE----APGPINFTVFLTMFGEKLNGT---- 97 (171)
T ss_pred HHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCC---CCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCC----
Confidence 46788999999999999999999999999999985 3677888888876 468999999999988776532
Q ss_pred CCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 259 DDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 259 ~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
...+.+..+|+.||.+++|.|..+.|+.+|...| ..+++++++.+++.+-.+..|.|+|.+|..
T Consensus 98 -----dpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~g---Dr~~~eEV~~m~r~~p~d~~G~~dy~~~~~ 161 (171)
T KOG0031|consen 98 -----DPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMG---DRFTDEEVDEMYREAPIDKKGNFDYKAFTY 161 (171)
T ss_pred -----CHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhc---ccCCHHHHHHHHHhCCcccCCceeHHHHHH
Confidence 2678899999999999999999999999999875 458999999999999999999999999998
No 19
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.61 E-value=1.1e-14 Score=120.69 Aligned_cols=139 Identities=24% Similarity=0.341 Sum_probs=113.5
Q ss_pred HHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCc-eeHHhHHHHhhhhhhhhcccccch
Q 048599 102 TSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGE-ISFYEYLPQFSKQDIEKNGMVHGQ 180 (354)
Q Consensus 102 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~-I~~~EF~~~~~~~~~~~~~~~~~~ 180 (354)
..+|..+|.++|.+.++|+++.+||..+... . ......+++..++.+++|. |+|++|+..+....... ..
T Consensus 32 I~~L~~rF~kl~~~~~~g~lt~eef~~i~~~-~---~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~-----~~ 102 (187)
T KOG0034|consen 32 IERLYERFKKLDRNNGDGYLTKEEFLSIPEL-A---LNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKA-----SK 102 (187)
T ss_pred HHHHHHHHHHhccccccCccCHHHHHHHHHH-h---cCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCc-----cH
Confidence 5679999999998746899999999998832 2 2356788999999999998 99999999998865332 22
Q ss_pred HhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCC----hHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHH
Q 048599 181 AGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNN----TAIQRWLLREKLERMDDDNDGKLNLDEFLENTYR 249 (354)
Q Consensus 181 ~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~----~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~ 249 (354)
..+++-+|+.||.+++|+|+++|+.+++......+ .......++.++..+|.++||+|+|+||...+..
T Consensus 103 ~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 103 REKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 24688899999999999999999999997654311 2445567889999999999999999999997763
No 20
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.59 E-value=1.9e-14 Score=119.11 Aligned_cols=138 Identities=19% Similarity=0.230 Sum_probs=107.9
Q ss_pred hHHHHHHhHhcC-CCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhcccccCC
Q 048599 182 GWWKEQFDNADV-DSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFEDD 260 (354)
Q Consensus 182 ~~l~~~F~~~D~-d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~~~ 260 (354)
.+++..|+.|=. ..+|.++.++|+.++..... ..-....+..+|+.+|.|+||.|+|.||+..+....+
T Consensus 26 ~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp--~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~r-------- 95 (193)
T KOG0044|consen 26 KEIQQWYRGFKNECPSGRLTLEEFREIYASFFP--DGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSR-------- 95 (193)
T ss_pred HHHHHHHHHhcccCCCCccCHHHHHHHHHHHCC--CCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcC--------
Confidence 344445554433 45899999999999986652 1223457889999999999999999999998876654
Q ss_pred CCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhh----CC----CCCCcHHHHHHHHHHHhccCCCCCccHHHHHhc
Q 048599 261 GDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYL----HP----GEISYAKYYSRHLIHEADDNRDGNLTLDEMLNH 331 (354)
Q Consensus 261 ~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~----~~----~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~ 331 (354)
+...+.++.+|+.||.|++|+|+..|+..++..+ +. ....-..+-++.+|+.+|.|+||.||++||+..
T Consensus 96 --Gt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~ 172 (193)
T KOG0044|consen 96 --GTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEG 172 (193)
T ss_pred --CcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHH
Confidence 2356778889999999999999999999988843 21 112335667999999999999999999999984
No 21
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.58 E-value=1.8e-14 Score=109.67 Aligned_cols=140 Identities=16% Similarity=0.197 Sum_probs=117.0
Q ss_pred chHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCC--CCCCeeHHHHHHHHHHHhhhccc
Q 048599 179 GQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDD--NDGKLNLDEFLENTYRTYKSYAE 256 (354)
Q Consensus 179 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d--~dg~I~~~eF~~~~~~~~~~~~~ 256 (354)
.....++++|..||..++|+|+..+...+|+.+|. ..++.++.+.+.....+ +-.+|+|++|+.++....+.-
T Consensus 8 d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~---nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk-- 82 (152)
T KOG0030|consen 8 DQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQ---NPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNK-- 82 (152)
T ss_pred chHHHHHHHHHHHhccCcccccHHHHHHHHHHhcC---CCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcc--
Confidence 44578999999999999999999999999999985 33556788888887766 457899999999877665421
Q ss_pred ccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcH
Q 048599 257 FEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHE 332 (354)
Q Consensus 257 ~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~ 332 (354)
.....+..-+-.+.||++++|.|...||+.+|..+| ..+++++++.|++-. .|.+|.|.|+.|++++
T Consensus 83 -----~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlG---ekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i 149 (152)
T KOG0030|consen 83 -----DQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLG---EKLTEEEVEELLAGQ-EDSNGCINYEAFVKHI 149 (152)
T ss_pred -----ccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHH---hhccHHHHHHHHccc-cccCCcCcHHHHHHHH
Confidence 223566777889999999999999999999999996 459999999999876 6888999999999854
No 22
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.56 E-value=3.4e-14 Score=126.91 Aligned_cols=136 Identities=16% Similarity=0.227 Sum_probs=120.4
Q ss_pred chHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhccccc
Q 048599 179 GQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFE 258 (354)
Q Consensus 179 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~ 258 (354)
+....++..|+.+|.+++|.++..++.+.+..... +.........++..+|.|.||.++|.||.+.+..
T Consensus 11 er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~--~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~--------- 79 (463)
T KOG0036|consen 11 ERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDH--PKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN--------- 79 (463)
T ss_pred HHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCC--CCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH---------
Confidence 33456888999999999999999999999887765 3345567889999999999999999999998874
Q ss_pred CCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhh
Q 048599 259 DDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYI 334 (354)
Q Consensus 259 ~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~ 334 (354)
.+..+..+|+.+|.++||.|..+|+.+.|+.++ ..++++++..+++.+|.++++.|+++||.++...
T Consensus 80 ------~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~g---i~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll 146 (463)
T KOG0036|consen 80 ------KELELYRIFQSIDLEHDGKIDPNEIWRYLKDLG---IQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLL 146 (463)
T ss_pred ------hHHHHHHHHhhhccccCCccCHHHHHHHHHHhC---CccCHHHHHHHHHHhccCCCeeeccHHHHhhhhc
Confidence 566789999999999999999999999999997 6699999999999999999999999999985543
No 23
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.55 E-value=6.4e-14 Score=116.05 Aligned_cols=139 Identities=23% Similarity=0.337 Sum_probs=110.1
Q ss_pred HHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhh-hcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccchHh
Q 048599 104 RLIYLFPLIDNEPKDGVLSLNELDNWNVELAVD-RLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQAG 182 (354)
Q Consensus 104 ~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~-~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~~ 182 (354)
.++..++.+=.++..|.++.++|+.++...... ........+|+.+|.|++|.|+|.||+..++....+. .. +
T Consensus 27 ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt---~e---e 100 (193)
T KOG0044|consen 27 EIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGT---LE---E 100 (193)
T ss_pred HHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCc---HH---H
Confidence 377777777666559999999999999888753 2345678889999999999999999999988865442 22 2
Q ss_pred HHHHHHhHhcCCCCCcccHHHHHHhhCCC----CC----CChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 183 WWKEQFDNADVDSNGTLNFDEFYNFLHPE----DS----NNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 183 ~l~~~F~~~D~d~~G~Is~~E~~~~l~~~----~~----~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
.++-+|++||.|++|+|+..|+..++... +. .........+..+|+.+|.|+||.|+++||...+.
T Consensus 101 kl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~ 174 (193)
T KOG0044|consen 101 KLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCK 174 (193)
T ss_pred HhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhh
Confidence 33447999999999999999999887432 11 11233456789999999999999999999999775
No 24
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=99.52 E-value=1.3e-13 Score=123.94 Aligned_cols=207 Identities=14% Similarity=0.193 Sum_probs=151.3
Q ss_pred HHHHhchhhcCCCCCCCcCHHHHHHHHHHHh------hhhc---------HHHHHH--HHHHHcCCCCCceeHHhHHHHh
Q 048599 104 RLIYLFPLIDNEPKDGVLSLNELDNWNVELA------VDRL---------SYTTQK--QIELSDRDGDGEISFYEYLPQF 166 (354)
Q Consensus 104 ~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~------~~~~---------~~~~~~--~~~~~D~~~dG~I~~~EF~~~~ 166 (354)
.++-+|+.+|.| |||-|+.+||..+..-.. ..+. ...+.. ....|.++++|+++++||+.++
T Consensus 234 ~F~IAFKMFD~d-gnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~ 312 (489)
T KOG2643|consen 234 NFRIAFKMFDLD-GNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQ 312 (489)
T ss_pred cceeeeeeeecC-CCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHH
Confidence 367799999999 999999999997653211 1100 111222 2357789999999999999998
Q ss_pred hhhhhhhcccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHH
Q 048599 167 SKQDIEKNGMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLEN 246 (354)
Q Consensus 167 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~ 246 (354)
..+. .+-++--|..+|+..+|.|+..+|..+|-.....+..-....++++-..++.+ +-.|+++||.++
T Consensus 313 e~Lq----------~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~-~~gISl~Ef~~F 381 (489)
T KOG2643|consen 313 ENLQ----------EEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDD-GKGISLQEFKAF 381 (489)
T ss_pred HHHH----------HHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCC-CCCcCHHHHHHH
Confidence 7743 23356689999999999999999999886554333333444677777777766 445999999875
Q ss_pred HHHHhhhcccccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHH
Q 048599 247 TYRTYKSYAEFEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLD 326 (354)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~ 326 (354)
+. .+. .......+...| ....+.|+..+|+++...+. ...+++..++.+|..+|.|+||.||.+
T Consensus 382 f~-Fl~------------~l~dfd~Al~fy-~~Ag~~i~~~~f~raa~~vt--GveLSdhVvdvvF~IFD~N~Dg~LS~~ 445 (489)
T KOG2643|consen 382 FR-FLN------------NLNDFDIALRFY-HMAGASIDEKTFQRAAKVVT--GVELSDHVVDVVFTIFDENNDGTLSHK 445 (489)
T ss_pred HH-HHh------------hhhHHHHHHHHH-HHcCCCCCHHHHHHHHHHhc--CcccccceeeeEEEEEccCCCCcccHH
Confidence 43 333 344444444444 24568899999999998774 356888899999999999999999999
Q ss_pred HHHhcHhhhhcc
Q 048599 327 EMLNHEYIFYNT 338 (354)
Q Consensus 327 EF~~~~~~f~~~ 338 (354)
||+..+..++..
T Consensus 446 EFl~Vmk~Rmhr 457 (489)
T KOG2643|consen 446 EFLAVMKRRMHR 457 (489)
T ss_pred HHHHHHHHHhhc
Confidence 999976665543
No 25
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.52 E-value=1.1e-13 Score=123.67 Aligned_cols=133 Identities=18% Similarity=0.317 Sum_probs=119.0
Q ss_pred HHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhh-hcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccc
Q 048599 101 ITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVD-RLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHG 179 (354)
Q Consensus 101 ~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~-~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~ 179 (354)
...|++.+|+.+|.+ ++|+|+..++.+.+..+... ........+|..+|.|.||.|+|.||...+...
T Consensus 12 r~~r~~~lf~~lD~~-~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~---------- 80 (463)
T KOG0036|consen 12 RDIRIRCLFKELDSK-NDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK---------- 80 (463)
T ss_pred HHHHHHHHHHHhccC-CCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHh----------
Confidence 456899999999999 99999999999999888877 445677788999999999999999999988763
Q ss_pred hHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 180 QAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 180 ~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
...+.++|..+|.++||.|+.+|+.+.|..+| ..++++.++.++..+|+++++.|+++||...+.
T Consensus 81 -E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~g---i~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~l 145 (463)
T KOG0036|consen 81 -ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLG---IQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLL 145 (463)
T ss_pred -HHHHHHHHhhhccccCCccCHHHHHHHHHHhC---CccCHHHHHHHHHHhccCCCeeeccHHHHhhhh
Confidence 23467799999999999999999999999998 568888999999999999999999999988765
No 26
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.45 E-value=5.8e-13 Score=116.01 Aligned_cols=138 Identities=25% Similarity=0.420 Sum_probs=112.7
Q ss_pred HHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHH-HHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccch
Q 048599 102 TSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSY-TTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQ 180 (354)
Q Consensus 102 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~-~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~ 180 (354)
..+-++.|+..|.| +||.++.+||..+|..-..+.+.. .+...+..+|+|+||.|+++||+.-+...... ..+
T Consensus 162 ~~rDe~rFk~AD~d-~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~-----~~e 235 (325)
T KOG4223|consen 162 IARDEERFKAADQD-GDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGN-----EEE 235 (325)
T ss_pred HHHHHHHHhhcccC-CCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCC-----CCC
Confidence 34667899999999 999999999999998877666544 45666899999999999999999988875431 112
Q ss_pred HhHH----HHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 181 AGWW----KEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 181 ~~~l----~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
..|+ .+.|...|+|++|+|+.+|+.+.+.+.+. .....++..++...|.|+||++|++|.+....
T Consensus 236 peWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~---d~A~~EA~hL~~eaD~dkD~kLs~eEIl~~~d 304 (325)
T KOG4223|consen 236 PEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSEQ---DHAKAEARHLLHEADEDKDGKLSKEEILEHYD 304 (325)
T ss_pred cccccccHHHHHHHhhcCCCCccCHHHHhcccCCCCc---cHHHHHHHHHhhhhccCccccccHHHHhhCcc
Confidence 2222 34677889999999999999999998874 45566899999999999999999999987543
No 27
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.23 E-value=2.6e-11 Score=83.98 Aligned_cols=62 Identities=34% Similarity=0.398 Sum_probs=54.5
Q ss_pred HHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhh----cHHHHHHHHHHHcCCCCCceeHHhHHHHh
Q 048599 104 RLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDR----LSYTTQKQIELSDRDGDGEISFYEYLPQF 166 (354)
Q Consensus 104 ~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~----~~~~~~~~~~~~D~~~dG~I~~~EF~~~~ 166 (354)
+|+++|+.+|++ ++|+|+.+||..++..++... ....++.+|+.+|.|+||.|+|+||+.++
T Consensus 1 ~l~~~F~~~D~d-~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKD-GDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTT-SSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCC-ccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 588999999999 999999999999999998544 34566667999999999999999999864
No 28
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.23 E-value=1.8e-11 Score=84.77 Aligned_cols=62 Identities=26% Similarity=0.400 Sum_probs=53.8
Q ss_pred HHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCC-CCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 269 AEETFVELDTNKDKLLEVEELKPIFSYLHPGE-ISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 269 ~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~-~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
++++|+.+|+|++|+|+.+||+.++..++... .......+..+|+.+|+|+||.|+++||++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~ 64 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLN 64 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhc
Confidence 67899999999999999999999999886321 234556778889999999999999999998
No 29
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.16 E-value=4.9e-11 Score=86.90 Aligned_cols=69 Identities=13% Similarity=0.209 Sum_probs=59.6
Q ss_pred CchhHHHHHHhhcC-CCCCCcCHHHHHHHHHh-hCCCCCCcHH-HHHHHHHHHhccCCCCCccHHHHHhcHhhhhcccc
Q 048599 265 DFPSAEETFVELDT-NKDKLLEVEELKPIFSY-LHPGEISYAK-YYSRHLIHEADDNRDGNLTLDEMLNHEYIFYNTVY 340 (354)
Q Consensus 265 ~~~~~~~~F~~~D~-d~dG~Is~~El~~~l~~-~~~~~~~~~~-~~~~~l~~~~D~~~dG~Is~~EF~~~~~~f~~~~~ 340 (354)
....+..+|+.||+ +++|+|+..||+.++.. ++ + .++. .+++.+++.+|.|+||+|+|+||+. .++++.
T Consensus 6 ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg--~-~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~----l~~~l~ 77 (89)
T cd05022 6 AIETLVSNFHKASVKGGKESLTASEFQELLTQQLP--H-LLKDVEGLEEKMKNLDVNQDSKLSFEEFWE----LIGELA 77 (89)
T ss_pred HHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhh--h-hccCHHHHHHHHHHhCCCCCCCCcHHHHHH----HHHHHH
Confidence 34568899999999 99999999999999998 74 2 2666 8999999999999999999999999 555544
No 30
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=99.15 E-value=3.3e-10 Score=102.20 Aligned_cols=150 Identities=18% Similarity=0.205 Sum_probs=106.3
Q ss_pred hHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhcccccCCC
Q 048599 182 GWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFEDDG 261 (354)
Q Consensus 182 ~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~ 261 (354)
..+...|+.+|.+++|+|+...+..++....+.+.... .+. -+....+.||.+.|.+....+..-.-.........
T Consensus 464 sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr--~L~--~kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slv 539 (631)
T KOG0377|consen 464 SDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWR--LLR--PKLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLV 539 (631)
T ss_pred hHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHH--Hhh--hhccCCCcCcceehHhHHHHhhhhhHHHHHHhHHH
Confidence 34678999999999999999999999976543222221 111 12234456789999888776532110000000000
Q ss_pred --CCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCC-CCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhhh
Q 048599 262 --DGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHP-GEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYIF 335 (354)
Q Consensus 262 --~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~-~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~f 335 (354)
--.....+..+|+.+|+|++|.||.+||+.+++-++. .+..+++.++..+.+.+|.|+||.|+++||+++++.-
T Consensus 540 etLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 540 ETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred HHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 0014567888999999999999999999998875431 2356899999999999999999999999999988764
No 31
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=99.14 E-value=4.1e-10 Score=101.73 Aligned_cols=158 Identities=18% Similarity=0.225 Sum_probs=110.6
Q ss_pred HcCCCCCceeHHhHHHHhhhhhhhhcccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCC------CCC-----C--C
Q 048599 149 SDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHP------EDS-----N--N 215 (354)
Q Consensus 149 ~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~------~~~-----~--~ 215 (354)
++.+.+|.|+|.||+-++..+... ...++-+|+.||.|+||.|+.+||..+..- .+. . .
T Consensus 208 ~~lg~~GLIsfSdYiFLlTlLS~p--------~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~ 279 (489)
T KOG2643|consen 208 YKLGESGLISFSDYIFLLTLLSIP--------ERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTG 279 (489)
T ss_pred EEcCCCCeeeHHHHHHHHHHHccC--------cccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCcccc
Confidence 456778999999999888775433 234566999999999999999999987721 110 0 0
Q ss_pred hHhhHHHHHH-HHHhhcCCCCCCeeHHHHHHHHHHHhhhcccccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHH
Q 048599 216 TAIQRWLLRE-KLERMDDDNDGKLNLDEFLENTYRTYKSYAEFEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFS 294 (354)
Q Consensus 216 ~~~~~~~~~~-l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~ 294 (354)
.......... +..-+..++++++++++|++++..+ ..+-++--|..+|+..+|.|+..+|..+|-
T Consensus 280 ~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e~L--------------q~Eil~lEF~~~~~~~~g~Ise~DFA~~lL 345 (489)
T KOG2643|consen 280 NSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQENL--------------QEEILELEFERFDKGDSGAISEVDFAELLL 345 (489)
T ss_pred ceehhhhhhhHHHHhhccCCCccccHHHHHHHHHHH--------------HHHHHHHHHHHhCcccccccCHHHHHHHHH
Confidence 0011011111 3344678999999999999977654 445567789999999999999999999887
Q ss_pred hhCCCCCCcHHH-HHHHHHHHhccCCCCCccHHHHHh
Q 048599 295 YLHPGEISYAKY-YSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 295 ~~~~~~~~~~~~-~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
.+...+ ..... ....+-+.++.. +-.||++||.+
T Consensus 346 ~~a~~n-~~~k~~~lkrvk~kf~~~-~~gISl~Ef~~ 380 (489)
T KOG2643|consen 346 AYAGVN-SKKKHKYLKRVKEKFKDD-GKGISLQEFKA 380 (489)
T ss_pred HHcccc-hHhHHHHHHHHHHhccCC-CCCcCHHHHHH
Confidence 664221 11222 355556677655 66799999988
No 32
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.09 E-value=3.3e-10 Score=82.60 Aligned_cols=67 Identities=15% Similarity=0.148 Sum_probs=60.7
Q ss_pred HHHHHhchhhcC-CCCCCCcCHHHHHHHHHH-HhhhhcH-HHHHHHHHHHcCCCCCceeHHhHHHHhhhhh
Q 048599 103 SRLIYLFPLIDN-EPKDGVLSLNELDNWNVE-LAVDRLS-YTTQKQIELSDRDGDGEISFYEYLPQFSKQD 170 (354)
Q Consensus 103 ~~l~~~F~~~D~-d~~dG~Is~~El~~~l~~-~~~~~~~-~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~ 170 (354)
..|..+|+.+|+ + ++|+|+..||+.++.. ++...+. ..++.+++.+|.|+||.|+|+||+.++....
T Consensus 8 ~~l~~~F~~fd~~~-~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 8 ETLVSNFHKASVKG-GKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHHhCCC-CCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 458999999999 9 9999999999999998 7766666 8899999999999999999999999888753
No 33
>PLN02964 phosphatidylserine decarboxylase
Probab=99.07 E-value=1.3e-09 Score=106.15 Aligned_cols=103 Identities=22% Similarity=0.264 Sum_probs=83.2
Q ss_pred chHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCC-CChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhcccc
Q 048599 179 GQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDS-NNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEF 257 (354)
Q Consensus 179 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~-~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~ 257 (354)
.+...++++|..+|+|++|.+ +..++..+|. .........+..++..+|.+++|.|+++||+.++... .
T Consensus 140 kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~l-g----- 209 (644)
T PLN02964 140 QEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAF-G----- 209 (644)
T ss_pred HHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh-c-----
Confidence 345778999999999999997 7777777762 2222222358999999999999999999999987643 1
Q ss_pred cCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHh
Q 048599 258 EDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSY 295 (354)
Q Consensus 258 ~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~ 295 (354)
.....+.+..+|+.+|+|++|+|+.+||+.++..
T Consensus 210 ----~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 210 ----NLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred ----cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 1125677999999999999999999999999987
No 34
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=99.03 E-value=1.8e-08 Score=92.10 Aligned_cols=210 Identities=14% Similarity=0.197 Sum_probs=139.9
Q ss_pred HHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhc---------------HHHHHHHHHHHcCCCCCceeHHhHHHHhh
Q 048599 103 SRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRL---------------SYTTQKQIELSDRDGDGEISFYEYLPQFS 167 (354)
Q Consensus 103 ~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~---------------~~~~~~~~~~~D~~~dG~I~~~EF~~~~~ 167 (354)
.++.+++..++.. +.|++...+|...|..+...+. ...++++|-.++..+.|.|+..|.+....
T Consensus 174 t~~~~~v~~l~~~-~~~yl~q~df~~~Lqeli~Thpl~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~tG~iti~el~~snl 252 (493)
T KOG2562|consen 174 TRLEQFVNLLIQA-GCSYLRQDDFKPYLQELIATHPLEFLDEEPEFQERYAETVIQRIFYYLNRSRTGRITIQELLRSNL 252 (493)
T ss_pred HHHHHHHHHHhcc-CccceeccccHHHHHHHHhcCCchhhccChhHHHHHHHHHhhhhheeeCCccCCceeHHHHHHhHH
Confidence 4466677777777 7777777777776665543332 12455666777888888888887665322
Q ss_pred hhhhhh---cccccch-----HhHHHHH---HhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHh----hcC
Q 048599 168 KQDIEK---NGMVHGQ-----AGWWKEQ---FDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLER----MDD 232 (354)
Q Consensus 168 ~~~~~~---~~~~~~~-----~~~l~~~---F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~----~D~ 232 (354)
...... ....... .+....+ |-.+|+|++|.|+.+++...-... ++...++++|.. .-.
T Consensus 253 l~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~t------lt~~ivdRIFs~v~r~~~~ 326 (493)
T KOG2562|consen 253 LDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGDHT------LTERIVDRIFSQVPRGFTV 326 (493)
T ss_pred HHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHHhccc------hhhHHHHHHHhhcccccee
Confidence 211100 0000000 1112233 778899999999999999876543 345678888883 334
Q ss_pred CCCCCeeHHHHHHHHHHHhhhcccccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHH-------hhCCCCCCcHH
Q 048599 233 DNDGKLNLDEFLENTYRTYKSYAEFEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFS-------YLHPGEISYAK 305 (354)
Q Consensus 233 d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~-------~~~~~~~~~~~ 305 (354)
-.+|+++|++|+.++..... ......+.-.|+.+|.+++|.|+..|++-+.. ..++... .-+
T Consensus 327 ~~eGrmdykdFv~FilA~e~----------k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l-~fe 395 (493)
T KOG2562|consen 327 KVEGRMDYKDFVDFILAEED----------KDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEAL-PFE 395 (493)
T ss_pred eecCcccHHHHHHHHHHhcc----------CCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcc-cHH
Confidence 57899999999998875432 12556788999999999999999999987665 2332222 224
Q ss_pred HHHHHHHHHhccCCCCCccHHHHHh
Q 048599 306 YYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 306 ~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
....+++..+-+-..|+|++++|..
T Consensus 396 d~l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 396 DALCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred HHHHHHHHHhCccCCCceeHHHHhh
Confidence 4566666666666799999999987
No 35
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=99.02 E-value=4.4e-10 Score=82.07 Aligned_cols=69 Identities=20% Similarity=0.303 Sum_probs=59.5
Q ss_pred chhHHHHHHhhc-CCCCC-CcCHHHHHHHHHh-----hCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhhhhcc
Q 048599 266 FPSAEETFVELD-TNKDK-LLEVEELKPIFSY-----LHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYIFYNT 338 (354)
Q Consensus 266 ~~~~~~~F~~~D-~d~dG-~Is~~El~~~l~~-----~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~f~~~ 338 (354)
...+..+|+.|| +|++| +|+.+||+.+|+. ++ ...++.+++.+++.+|.|+||+|+|+||+. ++..
T Consensus 7 ~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg---~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~----li~~ 79 (88)
T cd05027 7 MVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLE---EIKEQEVVDKVMETLDSDGDGECDFQEFMA----FVAM 79 (88)
T ss_pred HHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhc---CCCCHHHHHHHHHHhCCCCCCcCcHHHHHH----HHHH
Confidence 456889999998 79999 5999999999998 64 336788899999999999999999999998 6655
Q ss_pred ccC
Q 048599 339 VYN 341 (354)
Q Consensus 339 ~~~ 341 (354)
..+
T Consensus 80 ~~~ 82 (88)
T cd05027 80 VTT 82 (88)
T ss_pred HHH
Confidence 544
No 36
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=98.99 E-value=5.1e-09 Score=95.89 Aligned_cols=203 Identities=17% Similarity=0.233 Sum_probs=137.1
Q ss_pred HHHHHHhchh---hcCCCCCCCcCHHHHHHHHHH-HhhhhcHHHHHHHHH-HHcCCCCCceeHHhHHHHhhhhhhhhccc
Q 048599 102 TSRLIYLFPL---IDNEPKDGVLSLNELDNWNVE-LAVDRLSYTTQKQIE-LSDRDGDGEISFYEYLPQFSKQDIEKNGM 176 (354)
Q Consensus 102 ~~~l~~~F~~---~D~d~~dG~Is~~El~~~l~~-~~~~~~~~~~~~~~~-~~D~~~dG~I~~~EF~~~~~~~~~~~~~~ 176 (354)
+.+|+.+|-+ .+.+ +.-+.+.++|...... .........+.+++. ..|..+||.|+|+||+.+-...+..
T Consensus 32 ~~eLr~if~~~as~e~~-ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC~p---- 106 (694)
T KOG0751|consen 32 PKELRSIFLKYASIEKN-GESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESVLCAP---- 106 (694)
T ss_pred hHHHHHHHHHHhHHhhc-cccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhhccCc----
Confidence 3446666654 5778 7889999998864433 333333556666664 5678899999999999875554432
Q ss_pred ccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhccc
Q 048599 177 VHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAE 256 (354)
Q Consensus 177 ~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~ 256 (354)
......+|..||+.++|.+|.+++.+++......+...-.+..+-+-..+..+.--.++|.+|.+.+...
T Consensus 107 ----Dal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~------ 176 (694)
T KOG0751|consen 107 ----DALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEF------ 176 (694)
T ss_pred ----hHHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHHHHhccHHHHHHHHHHH------
Confidence 2346779999999999999999999999765432222222223323334444455679999999987654
Q ss_pred ccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHH-HHHHhccCCCCCccHHHHHh
Q 048599 257 FEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRH-LIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 257 ~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~-l~~~~D~~~dG~Is~~EF~~ 330 (354)
..+...++|+..|+.++|+||.-+++.++-.+. ..+....++. +......+...++|+..|..
T Consensus 177 --------~~E~~~qafr~~d~~~ng~is~Ldfq~imvt~~---~h~lt~~v~~nlv~vagg~~~H~vSf~yf~a 240 (694)
T KOG0751|consen 177 --------QLEHAEQAFREKDKAKNGFISVLDFQDIMVTIR---IHLLTPFVEENLVSVAGGNDSHQVSFSYFNA 240 (694)
T ss_pred --------HHHHHHHHHHHhcccCCCeeeeechHhhhhhhh---hhcCCHHHhhhhhhhcCCCCccccchHHHHH
Confidence 345588999999999999999999999887653 2223333444 34444444445677666554
No 37
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.98 E-value=1.8e-09 Score=78.83 Aligned_cols=67 Identities=28% Similarity=0.323 Sum_probs=60.2
Q ss_pred HHHHHHhchhhc-CCCCCC-CcCHHHHHHHHHH-----HhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhh
Q 048599 102 TSRLIYLFPLID-NEPKDG-VLSLNELDNWNVE-----LAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQ 169 (354)
Q Consensus 102 ~~~l~~~F~~~D-~d~~dG-~Is~~El~~~l~~-----~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~ 169 (354)
-..|+.+|+.+| ++ |+| .|+..||+.+|+. ++...+...+.++++.+|.|++|.|+|+||+.++...
T Consensus 7 ~~~l~~aF~~fD~~d-gdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 7 MVALIDVFHQYSGRE-GDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHHhcccC-CCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 356999999998 79 999 5999999999998 7777777889999999999999999999999987764
No 38
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=98.97 E-value=2.5e-09 Score=82.29 Aligned_cols=96 Identities=23% Similarity=0.319 Sum_probs=78.2
Q ss_pred HHHHHhhcCCCCCCeeHHHHHHHHHHHhhhcccccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCc
Q 048599 224 REKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISY 303 (354)
Q Consensus 224 ~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~ 303 (354)
+++...+..||.|.++|++|+.++..... .....-++.-+|+.+|-|+|++|...+|...+.++.-+ .+
T Consensus 74 ~ri~e~FSeDG~GnlsfddFlDmfSV~sE---------~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~--eL 142 (189)
T KOG0038|consen 74 RRICEVFSEDGRGNLSFDDFLDMFSVFSE---------MAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRD--EL 142 (189)
T ss_pred HHHHHHhccCCCCcccHHHHHHHHHHHHh---------hChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhc--cC
Confidence 45667778899999999999998765433 11255667889999999999999999999999988533 36
Q ss_pred HHHH----HHHHHHHhccCCCCCccHHHHHh
Q 048599 304 AKYY----SRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 304 ~~~~----~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
++++ ++.++.++|.|+||+|++.||..
T Consensus 143 s~eEv~~i~ekvieEAD~DgDgkl~~~eFe~ 173 (189)
T KOG0038|consen 143 SDEEVELICEKVIEEADLDGDGKLSFAEFEH 173 (189)
T ss_pred CHHHHHHHHHHHHHHhcCCCCCcccHHHHHH
Confidence 6766 45677799999999999999988
No 39
>PLN02964 phosphatidylserine decarboxylase
Probab=98.95 E-value=4e-09 Score=102.91 Aligned_cols=97 Identities=22% Similarity=0.298 Sum_probs=82.6
Q ss_pred HHHHHhchhhcCCCCCCCcCHHHHHHHHHHHh-hhhcHHH---HHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhccccc
Q 048599 103 SRLIYLFPLIDNEPKDGVLSLNELDNWNVELA-VDRLSYT---TQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVH 178 (354)
Q Consensus 103 ~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~-~~~~~~~---~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~ 178 (354)
++++++|..+|.| ++|.+ +..+++.++ ..++..+ ++++|+.+|.|++|.|+++||+.++..... .
T Consensus 143 ~elkeaF~lfD~d-gdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~------~ 211 (644)
T PLN02964 143 ESACESFDLLDPS-SSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN------L 211 (644)
T ss_pred HHHHHHHHHHCCC-CCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc------C
Confidence 5689999999999 99997 888899988 4665554 789999999999999999999999886421 1
Q ss_pred chHhHHHHHHhHhcCCCCCcccHHHHHHhhCC
Q 048599 179 GQAGWWKEQFDNADVDSNGTLNFDEFYNFLHP 210 (354)
Q Consensus 179 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~ 210 (354)
...+.++.+|+.+|.|++|+|+.+||..++..
T Consensus 212 ~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 212 VAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 22446899999999999999999999999876
No 40
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.92 E-value=2.4e-09 Score=79.26 Aligned_cols=65 Identities=15% Similarity=0.267 Sum_probs=54.2
Q ss_pred chhHHHHHHhhc-CCCCC-CcCHHHHHHHHHhhCCC--CCCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 266 FPSAEETFVELD-TNKDK-LLEVEELKPIFSYLHPG--EISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 266 ~~~~~~~F~~~D-~d~dG-~Is~~El~~~l~~~~~~--~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
...+..+|..|| +|++| +||..||+.++....+. ....++.+++.+++.+|.|+||.|+|+||+.
T Consensus 9 ~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~ 77 (93)
T cd05026 9 MDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVV 77 (93)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 456788999998 78999 59999999999763211 1224678999999999999999999999999
No 41
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.87 E-value=7.6e-09 Score=71.65 Aligned_cols=60 Identities=22% Similarity=0.358 Sum_probs=53.8
Q ss_pred HHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhh
Q 048599 270 EETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYI 334 (354)
Q Consensus 270 ~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~ 334 (354)
+.+|..+|++++|.|+.+|++.++..++ ++.+++..++..+|.+++|.|+++||+..+..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g-----~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSG-----LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcC-----CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 5789999999999999999999998874 36888999999999999999999999995543
No 42
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.86 E-value=5e-09 Score=76.48 Aligned_cols=69 Identities=16% Similarity=0.232 Sum_probs=58.5
Q ss_pred chhHHHHHHhhcC-CC-CCCcCHHHHHHHHHh---hCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhhhhcccc
Q 048599 266 FPSAEETFVELDT-NK-DKLLEVEELKPIFSY---LHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYIFYNTVY 340 (354)
Q Consensus 266 ~~~~~~~F~~~D~-d~-dG~Is~~El~~~l~~---~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~f~~~~~ 340 (354)
...+-.+|..||. |+ +|+|+.+||+.++.. ++ ..+++++++.+++.+|.|++|+|+|+||+. +++.++
T Consensus 9 ~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg---~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~----lm~~l~ 81 (88)
T cd05029 9 IGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIG---SKLQDAEIAKLMEDLDRNKDQEVNFQEYVT----FLGALA 81 (88)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcC---CCCCHHHHHHHHHHhcCCCCCCCcHHHHHH----HHHHHH
Confidence 3456789999998 77 899999999999974 33 347899999999999999999999999998 666655
Q ss_pred C
Q 048599 341 N 341 (354)
Q Consensus 341 ~ 341 (354)
.
T Consensus 82 ~ 82 (88)
T cd05029 82 L 82 (88)
T ss_pred H
Confidence 4
No 43
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.86 E-value=8.6e-09 Score=76.29 Aligned_cols=67 Identities=22% Similarity=0.253 Sum_probs=56.3
Q ss_pred HHHHHhchhhc-CCCCCC-CcCHHHHHHHHHHH-h----hhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhh
Q 048599 103 SRLIYLFPLID-NEPKDG-VLSLNELDNWNVEL-A----VDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQD 170 (354)
Q Consensus 103 ~~l~~~F~~~D-~d~~dG-~Is~~El~~~l~~~-~----~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~ 170 (354)
..++++|+++| .| |+| +|+..||+.++... + .......+..+++.+|.|++|.|+|+||+.++....
T Consensus 10 ~~~~~~F~~~dd~d-gdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 10 DTLIRIFHNYSGKE-GDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHHHHHHHccC-CCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 45888899999 78 898 59999999999763 2 223457899999999999999999999999887753
No 44
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.83 E-value=6.2e-09 Score=77.06 Aligned_cols=65 Identities=22% Similarity=0.307 Sum_probs=55.2
Q ss_pred chhHHHHHHhhc-CCCCCC-cCHHHHHHHHHh-hCCC-CCCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 266 FPSAEETFVELD-TNKDKL-LEVEELKPIFSY-LHPG-EISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 266 ~~~~~~~F~~~D-~d~dG~-Is~~El~~~l~~-~~~~-~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
...++++|..|| .+++|+ |+..||+.+|+. ++.. ....+..+++.+++.+|.|++|.|+|+||+.
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~ 76 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVV 76 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHH
Confidence 456889999997 999995 999999999985 5310 1235788999999999999999999999998
No 45
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.81 E-value=9.3e-09 Score=76.42 Aligned_cols=65 Identities=20% Similarity=0.290 Sum_probs=54.7
Q ss_pred chhHHHHHHhhcC-CC-CCCcCHHHHHHHHHhhCCC--CCCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 266 FPSAEETFVELDT-NK-DKLLEVEELKPIFSYLHPG--EISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 266 ~~~~~~~F~~~D~-d~-dG~Is~~El~~~l~~~~~~--~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
...++.+|..||. |+ +|+|+..||+.+|+...+. ....+..+++.++..+|.|++|.|+|+||+.
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~ 75 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVS 75 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 3457899999997 97 7999999999999862111 1346788999999999999999999999998
No 46
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=98.80 E-value=3.9e-08 Score=75.83 Aligned_cols=103 Identities=23% Similarity=0.268 Sum_probs=79.9
Q ss_pred HHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCC--CChHh
Q 048599 141 TTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDS--NNTAI 218 (354)
Q Consensus 141 ~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~--~~~~~ 218 (354)
.-+++...+..+|.|.++|+.|+.+++...... ..+ -+..-+|+.||-|++++|...++...+..+.. ..+.-
T Consensus 72 fk~ri~e~FSeDG~GnlsfddFlDmfSV~sE~A----Prd-lK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eE 146 (189)
T KOG0038|consen 72 FKRRICEVFSEDGRGNLSFDDFLDMFSVFSEMA----PRD-LKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEE 146 (189)
T ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHHHHhhC----hHH-hhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHH
Confidence 455667778899999999999999988764221 111 23455999999999999999999999876532 12333
Q ss_pred hHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 219 QRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 219 ~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
..-.++.++...|.||||++++.+|...+.
T Consensus 147 v~~i~ekvieEAD~DgDgkl~~~eFe~~i~ 176 (189)
T KOG0038|consen 147 VELICEKVIEEADLDGDGKLSFAEFEHVIL 176 (189)
T ss_pred HHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Confidence 445688899999999999999999988765
No 47
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.79 E-value=1.9e-08 Score=74.70 Aligned_cols=67 Identities=21% Similarity=0.297 Sum_probs=58.2
Q ss_pred HHHHHHhchhhcC-CCC-CCCcCHHHHHHHHHH-----HhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhh
Q 048599 102 TSRLIYLFPLIDN-EPK-DGVLSLNELDNWNVE-----LAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQ 169 (354)
Q Consensus 102 ~~~l~~~F~~~D~-d~~-dG~Is~~El~~~l~~-----~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~ 169 (354)
...++.+|..+|. + + +|+|+..||+.+|.. ++...+...+..+++.+|.+++|.|+|+||+.++...
T Consensus 7 ~~~l~~~F~~~D~~d-g~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 7 MESLILTFHRYAGKD-GDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHhccC-CCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4569999999997 8 8 699999999999986 3445567889999999999999999999999988764
No 48
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.79 E-value=1.4e-08 Score=74.13 Aligned_cols=66 Identities=24% Similarity=0.303 Sum_probs=58.4
Q ss_pred HHHHHhchhhcC-CCC-CCCcCHHHHHHHHHH---HhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhh
Q 048599 103 SRLIYLFPLIDN-EPK-DGVLSLNELDNWNVE---LAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQ 169 (354)
Q Consensus 103 ~~l~~~F~~~D~-d~~-dG~Is~~El~~~l~~---~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~ 169 (354)
..|..+|.++|. + | +|+|+.+||+.++.. ++.+.+..++.++|+.+|.|++|.|+|+||+.++...
T Consensus 10 ~~~i~~F~~y~~~~-~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 10 GLLVAIFHKYSGRE-GDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHccC-CCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 458899999998 6 6 899999999999964 5777788999999999999999999999999887764
No 49
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.79 E-value=1.7e-08 Score=75.40 Aligned_cols=65 Identities=18% Similarity=0.217 Sum_probs=58.7
Q ss_pred HHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhh
Q 048599 102 TSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQ 169 (354)
Q Consensus 102 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~ 169 (354)
..+++.+|..+|.+ ++|.|+.+|+..+++..+ .+..++.+++..+|.+++|.|+|+||+.++...
T Consensus 9 ~~~l~~~F~~~D~d-~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 9 KAKYEQIFRSLDKN-QDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLI 73 (96)
T ss_pred HHHHHHHHHHhCCC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 55699999999999 999999999999998865 456789999999999999999999999987764
No 50
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=98.79 E-value=3.3e-08 Score=89.52 Aligned_cols=145 Identities=26% Similarity=0.329 Sum_probs=103.5
Q ss_pred HHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHH-HHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhc-c-----
Q 048599 103 SRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYT-TQKQIELSDRDGDGEISFYEYLPQFSKQDIEKN-G----- 175 (354)
Q Consensus 103 ~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~-~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~-~----- 175 (354)
..|..-|+++|.+ +.|+|+...+..++.....-..+.. +.. +....+.||.|.|.+.+..+........ .
T Consensus 464 sdL~~eF~~~D~~-ksG~lsis~Wa~~mE~i~~L~LPWr~L~~--kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slve 540 (631)
T KOG0377|consen 464 SDLEDEFRKYDPK-KSGKLSISHWAKCMENITGLNLPWRLLRP--KLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVE 540 (631)
T ss_pred hHHHHHHHhcChh-hcCeeeHHHHHHHHHHHhcCCCcHHHhhh--hccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHH
Confidence 4577899999999 9999999999998865432211121 111 2344566789999888776654322110 0
Q ss_pred cccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCC-CChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHH
Q 048599 176 MVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDS-NNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRT 250 (354)
Q Consensus 176 ~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~-~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~ 250 (354)
..-.....+..+|+.+|.|++|.||.+||..+..-.+. .+..+++.++.++-+.+|.|+||+|++.||+.++...
T Consensus 541 tLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 541 TLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred HHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 00011234677999999999999999999998865443 2345677889999999999999999999999987643
No 51
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.78 E-value=2.2e-08 Score=74.12 Aligned_cols=68 Identities=26% Similarity=0.355 Sum_probs=58.3
Q ss_pred HHHHHHhchhhc-CCCCCCC-cCHHHHHHHHHH-Hhh----hhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhh
Q 048599 102 TSRLIYLFPLID-NEPKDGV-LSLNELDNWNVE-LAV----DRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQD 170 (354)
Q Consensus 102 ~~~l~~~F~~~D-~d~~dG~-Is~~El~~~l~~-~~~----~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~ 170 (354)
.+.++++|..+| .+ ++|+ |+..||+.+|+. ++. .++...++++|+.+|.|++|.|+|+||+.++....
T Consensus 8 ~~~l~~~F~~fDd~d-g~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 8 METLINVFHAHSGKE-GDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (92)
T ss_pred HHHHHHHHHHHhccc-CCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 356999999997 99 9995 999999999975 543 24567899999999999999999999999887643
No 52
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.78 E-value=1.2e-08 Score=74.51 Aligned_cols=73 Identities=18% Similarity=0.177 Sum_probs=59.2
Q ss_pred CchhHHHHHHh-hcCCCCC-CcCHHHHHHHHHhhCCC--CCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhhhhcccc
Q 048599 265 DFPSAEETFVE-LDTNKDK-LLEVEELKPIFSYLHPG--EISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYIFYNTVY 340 (354)
Q Consensus 265 ~~~~~~~~F~~-~D~d~dG-~Is~~El~~~l~~~~~~--~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~f~~~~~ 340 (354)
....+..+|.. +|++++| +||.+||+.++....|. ....++.+++.+++.+|.|+||+|+|+||+. ++..++
T Consensus 7 ~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~----l~~~l~ 82 (89)
T cd05023 7 CIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLN----LIGGLA 82 (89)
T ss_pred HHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHH----HHHHHH
Confidence 34567889999 7888986 99999999999876432 1235678899999999999999999999999 666554
Q ss_pred C
Q 048599 341 N 341 (354)
Q Consensus 341 ~ 341 (354)
.
T Consensus 83 ~ 83 (89)
T cd05023 83 V 83 (89)
T ss_pred H
Confidence 4
No 53
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.77 E-value=1.7e-08 Score=69.83 Aligned_cols=61 Identities=20% Similarity=0.248 Sum_probs=55.0
Q ss_pred HHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhh
Q 048599 106 IYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQ 169 (354)
Q Consensus 106 ~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~ 169 (354)
+.+|..+|++ ++|.|+.+|+..++...+. +...+.++|..+|.+++|.|+|+||+.++...
T Consensus 2 ~~~F~~~D~~-~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPD-GDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCC-CCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 5789999999 9999999999999988764 56789999999999999999999999987653
No 54
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=98.75 E-value=5.6e-08 Score=81.55 Aligned_cols=179 Identities=18% Similarity=0.146 Sum_probs=114.6
Q ss_pred HHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChH--
Q 048599 140 YTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTA-- 217 (354)
Q Consensus 140 ~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~-- 217 (354)
..+..+|...|.|.||.|+-.|..+.+....... ..+.++.-+..|+..|+|++|.|+.+|++--+....+...+
T Consensus 101 rklmviFsKvDVNtDrkisAkEmqrwImektaEH---fqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekev 177 (362)
T KOG4251|consen 101 RKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEH---FQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEV 177 (362)
T ss_pred HHHHHHHhhcccCccccccHHHHHHHHHHHHHHH---HHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHH
Confidence 4566789999999999999999999887644321 12223334558999999999999999998755433221111
Q ss_pred ---------hhHHHHHHHHHhhcCCCCCC---------eeHHHHHHHHHHHhhhcccccCCCCCCCchhHHHHHHhhcCC
Q 048599 218 ---------IQRWLLREKLERMDDDNDGK---------LNLDEFLENTYRTYKSYAEFEDDGDGTDFPSAEETFVELDTN 279 (354)
Q Consensus 218 ---------~~~~~~~~l~~~~D~d~dg~---------I~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 279 (354)
..-.+-.+.+..-+++..++ ++-.||+.++..-.. .+.....+..+...+|+|
T Consensus 178 adairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhS---------rgmLrfmVkeivrdlDqd 248 (362)
T KOG4251|consen 178 ADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHS---------RGMLRFMVKEIVRDLDQD 248 (362)
T ss_pred HHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhh---------hhhHHHHHHHHHHHhccC
Confidence 11112233444445555554 444889887654332 112345577788889999
Q ss_pred CCCCcCHHHHHHHHHhhCC--CCCCcHHHH----HHHHHHHhccCCCCCccHHHHHh
Q 048599 280 KDKLLEVEELKPIFSYLHP--GEISYAKYY----SRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 280 ~dG~Is~~El~~~l~~~~~--~~~~~~~~~----~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
+|..+|..||......... ....+.+-. ....-..+|.|+||.++++|...
T Consensus 249 gDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~ 305 (362)
T KOG4251|consen 249 GDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELED 305 (362)
T ss_pred CCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHh
Confidence 9999999999875431100 001122222 23334478999999999999877
No 55
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.74 E-value=3.1e-08 Score=75.90 Aligned_cols=59 Identities=29% Similarity=0.323 Sum_probs=51.9
Q ss_pred CchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 265 DFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 265 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
....+..+|..+|+|+||+||.+||..+. ++ ..+..+..++..+|.|+||.||++||..
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~-----~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~ 104 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR--LD-----PNEHCIKPFFESCDLDKDGSISLDEWCY 104 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH--cc-----chHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 45678899999999999999999999876 32 2366788999999999999999999999
No 56
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.73 E-value=3.8e-08 Score=73.43 Aligned_cols=71 Identities=24% Similarity=0.307 Sum_probs=60.5
Q ss_pred ccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhh
Q 048599 177 VHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYK 252 (354)
Q Consensus 177 ~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~ 252 (354)
+..+...++.+|..+|.+++|.|+..|+..+++..+ ++..++..++..+|.+++|.|+|+||+.++....+
T Consensus 5 s~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~-----~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~ 75 (96)
T smart00027 5 SPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG-----LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYR 75 (96)
T ss_pred CHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC-----CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHH
Confidence 345667899999999999999999999999998765 34567889999999999999999999997765443
No 57
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.73 E-value=2.8e-08 Score=65.67 Aligned_cols=52 Identities=27% Similarity=0.413 Sum_probs=48.0
Q ss_pred CCCCcCHHHHHHHHHHHhhh-hcHHHHHHHHHHHcCCCCCceeHHhHHHHhhh
Q 048599 117 KDGVLSLNELDNWNVELAVD-RLSYTTQKQIELSDRDGDGEISFYEYLPQFSK 168 (354)
Q Consensus 117 ~dG~Is~~El~~~l~~~~~~-~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~ 168 (354)
++|.|+.+||+.+|..++.. .+..++..+|..+|.|++|.|+|+||+.++..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 37999999999999888888 88999999999999999999999999998753
No 58
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.72 E-value=2.3e-08 Score=66.02 Aligned_cols=49 Identities=29% Similarity=0.422 Sum_probs=44.5
Q ss_pred CCCCcCHHHHHHHHHhhCCCCCC-cHHHHHHHHHHHhccCCCCCccHHHHHhc
Q 048599 280 KDKLLEVEELKPIFSYLHPGEIS-YAKYYSRHLIHEADDNRDGNLTLDEMLNH 331 (354)
Q Consensus 280 ~dG~Is~~El~~~l~~~~~~~~~-~~~~~~~~l~~~~D~~~dG~Is~~EF~~~ 331 (354)
++|.|+.+||+.+|..+| .. ++++++..||..+|.|++|.|+|+||+..
T Consensus 1 ~~G~i~~~~~~~~l~~~g---~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~ 50 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLG---IKDLSEEEVDRLFREFDTDGDGYISFDEFISM 50 (54)
T ss_dssp SSSEEEHHHHHHHHHHTT---SSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhC---CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Confidence 479999999999997775 44 88999999999999999999999999993
No 59
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.72 E-value=4.3e-08 Score=71.66 Aligned_cols=67 Identities=19% Similarity=0.259 Sum_probs=56.8
Q ss_pred HHHHHHhchh-hcCCCCCC-CcCHHHHHHHHHHHhh-----hhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhh
Q 048599 102 TSRLIYLFPL-IDNEPKDG-VLSLNELDNWNVELAV-----DRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQ 169 (354)
Q Consensus 102 ~~~l~~~F~~-~D~d~~dG-~Is~~El~~~l~~~~~-----~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~ 169 (354)
...|..+|++ +|++ |+| +|+.+||+.++..... ......+.++++.+|.|+||.|+|+||+.++...
T Consensus 8 i~~l~~~F~~y~~~d-g~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 8 IESLIAVFQKYAGKD-GDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHhccC-CCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 3568999999 7888 876 9999999999987632 2335789999999999999999999999988764
No 60
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.69 E-value=6.8e-08 Score=70.88 Aligned_cols=67 Identities=22% Similarity=0.224 Sum_probs=57.9
Q ss_pred HHHHHHhchhhcC--CCCCCCcCHHHHHHHHHH-Hhhhh----cHHHHHHHHHHHcCCCCCceeHHhHHHHhhhh
Q 048599 102 TSRLIYLFPLIDN--EPKDGVLSLNELDNWNVE-LAVDR----LSYTTQKQIELSDRDGDGEISFYEYLPQFSKQ 169 (354)
Q Consensus 102 ~~~l~~~F~~~D~--d~~dG~Is~~El~~~l~~-~~~~~----~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~ 169 (354)
.+.++.+|..+|+ + ++|.|+..||..+++. .+... ....+..++..+|.+++|.|+|++|+.++...
T Consensus 7 ~~~l~~~F~~~D~~~~-~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 7 IETIIDVFHKYSGKEG-DKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHhhccC-CCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 4558999999999 9 9999999999999976 44333 36789999999999999999999999988763
No 61
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.64 E-value=1.3e-07 Score=63.86 Aligned_cols=59 Identities=25% Similarity=0.424 Sum_probs=54.0
Q ss_pred HHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 269 AEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 269 ~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
+..+|..+|.+++|.|+..|+..+++.++ ...+...+..++..+|.+++|.|++++|+.
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~ 60 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG---EGLSEEEIDEMIREVDKDGDGKIDFEEFLE 60 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC---CCCCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence 56789999999999999999999999886 446788899999999999999999999987
No 62
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.63 E-value=1e-07 Score=73.08 Aligned_cols=62 Identities=29% Similarity=0.342 Sum_probs=53.8
Q ss_pred HHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhh
Q 048599 101 ITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFS 167 (354)
Q Consensus 101 ~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~ 167 (354)
.+..+.-.|..+|.| +||.|+.+||..+. .......+.++|..+|.|+||.||++||...+.
T Consensus 46 ~~~~l~w~F~~lD~d-~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 46 CKDPVGWMFNQLDGN-YDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHHCCC-CCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 456799999999999 99999999999865 223356788999999999999999999999883
No 63
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.62 E-value=1.3e-07 Score=69.41 Aligned_cols=73 Identities=16% Similarity=0.169 Sum_probs=59.2
Q ss_pred chHhHHHHHHhHhcC--CCCCcccHHHHHHhhCC-CCCC-ChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHh
Q 048599 179 GQAGWWKEQFDNADV--DSNGTLNFDEFYNFLHP-EDSN-NTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTY 251 (354)
Q Consensus 179 ~~~~~l~~~F~~~D~--d~~G~Is~~E~~~~l~~-~~~~-~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~ 251 (354)
+.+..++.+|..+|. +++|.|+..||..++.. .+.. ....+...+..++..+|.+++|.|+|++|+..+....
T Consensus 5 ~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~~ 81 (88)
T cd00213 5 KAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKLA 81 (88)
T ss_pred HHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHH
Confidence 456778999999999 89999999999999975 3311 0123467899999999999999999999999887543
No 64
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.61 E-value=1.3e-07 Score=63.72 Aligned_cols=61 Identities=33% Similarity=0.449 Sum_probs=56.5
Q ss_pred HHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHh
Q 048599 105 LIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQF 166 (354)
Q Consensus 105 l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~ 166 (354)
++.+|..+|.+ ++|.|+..|+..++..++.......+..+|..+|.+++|.|++.+|+.++
T Consensus 2 ~~~~f~~~d~~-~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKD-GDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCC-CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 67889999999 99999999999999999888888889999999999999999999998764
No 65
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=98.60 E-value=1.5e-06 Score=80.06 Aligned_cols=198 Identities=18% Similarity=0.242 Sum_probs=130.2
Q ss_pred hhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhccccc-----------
Q 048599 110 PLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVH----------- 178 (354)
Q Consensus 110 ~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~----------- 178 (354)
..-|.. +||.||.+||..+-.-++. + +......|..+|+.++|.++++++...+............
T Consensus 81 ~iaD~t-KDglisf~eF~afe~~lC~-p-Dal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg 157 (694)
T KOG0751|consen 81 SIADQT-KDGLISFQEFRAFESVLCA-P-DALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFG 157 (694)
T ss_pred hhhhhc-ccccccHHHHHHHHhhccC-c-hHHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhh
Confidence 345677 8999999999975443432 2 3455667999999999999999999887765432211110
Q ss_pred ------------------chHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHh-hcCCCCCCee
Q 048599 179 ------------------GQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLER-MDDDNDGKLN 239 (354)
Q Consensus 179 ------------------~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~-~D~d~dg~I~ 239 (354)
-..+.-+++|+..|+.++|.||.=+|+..+.... ..+....++..+.. ...+...+++
T Consensus 158 ~~~~r~~ny~~f~Q~lh~~~~E~~~qafr~~d~~~ng~is~Ldfq~imvt~~---~h~lt~~v~~nlv~vagg~~~H~vS 234 (694)
T KOG0751|consen 158 DIRKRHLNYAEFTQFLHEFQLEHAEQAFREKDKAKNGFISVLDFQDIMVTIR---IHLLTPFVEENLVSVAGGNDSHQVS 234 (694)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcccCCCeeeeechHhhhhhhh---hhcCCHHHhhhhhhhcCCCCccccc
Confidence 1112235677888888888888877777775443 22222333333333 3333445677
Q ss_pred HHHHHHHHHHHhhhcccccCCCCCCCchhHHHHHHhh-cCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccC
Q 048599 240 LDEFLENTYRTYKSYAEFEDDGDGTDFPSAEETFVEL-DTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDN 318 (354)
Q Consensus 240 ~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~-D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~ 318 (354)
+..|.. ....+. ..+.+++.+..+ +.-+|-.++.+++..+-...+ ..++-+++.+|+..|..
T Consensus 235 f~yf~a-fnslL~------------~melirk~y~s~~~~~~d~~~~kdq~~~~a~~~~----q~t~~~idilf~la~~~ 297 (694)
T KOG0751|consen 235 FSYFNA-FNSLLN------------NMELIRKIYSSLAGTRKDVEVTKDQFSLAAQTSK----QVTPLEIDILFQLADLY 297 (694)
T ss_pred hHHHHH-HHHHHh------------hHHHHHHHHHHhcccccchhhhHHHHHHHHHHhh----ccCchhhhhhhhhhhcc
Confidence 776644 333332 556778888776 556777899999988777663 35677899999988776
Q ss_pred -CCCCccHHHHHh
Q 048599 319 -RDGNLTLDEMLN 330 (354)
Q Consensus 319 -~dG~Is~~EF~~ 330 (354)
.-|++++.++.+
T Consensus 298 ~~~~~ltl~Di~~ 310 (694)
T KOG0751|consen 298 HPMGRLTLADIER 310 (694)
T ss_pred cccccccHHHHHh
Confidence 467899999877
No 66
>PF14658 EF-hand_9: EF-hand domain
Probab=98.50 E-value=3.3e-07 Score=61.70 Aligned_cols=64 Identities=22% Similarity=0.241 Sum_probs=57.3
Q ss_pred HHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCC-CCccHHHHHhcHhhhh
Q 048599 271 ETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRD-GNLTLDEMLNHEYIFY 336 (354)
Q Consensus 271 ~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~d-G~Is~~EF~~~~~~f~ 336 (354)
.+|..||+++.|.|....+..+|+.++. ...++.+++.|.+.+|+++. |.|+++.|+..+..||
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~--~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~wi 66 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTG--RSPEESELQDLINELDPEGRDGSVNFDTFLAIMRDWI 66 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcC--CCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHHhC
Confidence 4699999999999999999999999963 24678899999999999987 9999999999887775
No 67
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=98.49 E-value=2.2e-06 Score=78.67 Aligned_cols=207 Identities=13% Similarity=0.114 Sum_probs=141.3
Q ss_pred HHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhc-cc---ccc--
Q 048599 106 IYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKN-GM---VHG-- 179 (354)
Q Consensus 106 ~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~-~~---~~~-- 179 (354)
..+|.+++.+ ..|.|+...|...-.... ......+.+++..++..+.|.+.-.+|...+.......+ +. ..+
T Consensus 142 ~~~f~k~~~d-~~g~it~~~Fi~~~~~~~-~l~~t~~~~~v~~l~~~~~~yl~q~df~~~Lqeli~Thpl~~l~~~pEf~ 219 (493)
T KOG2562|consen 142 ASTFRKIDGD-DTGHITRDKFINYWMRGL-MLTHTRLEQFVNLLIQAGCSYLRQDDFKPYLQELIATHPLEFLDEEPEFQ 219 (493)
T ss_pred hhhhhhhccC-cCCceeHHHHHHHHHhhh-hHHHHHHHHHHHHHhccCccceeccccHHHHHHHHhcCCchhhccChhHH
Confidence 4689999999 999999999987443322 233467778899999999999988777776655432211 00 000
Q ss_pred ---hHhHHHHHHhHhcCCCCCcccHHHHHHhh-----CCCCC--CChHhhH----HH---HHHHHHhhcCCCCCCeeHHH
Q 048599 180 ---QAGWWKEQFDNADVDSNGTLNFDEFYNFL-----HPEDS--NNTAIQR----WL---LREKLERMDDDNDGKLNLDE 242 (354)
Q Consensus 180 ---~~~~l~~~F~~~D~d~~G~Is~~E~~~~l-----~~~~~--~~~~~~~----~~---~~~l~~~~D~d~dg~I~~~e 242 (354)
..-.+.++|-.+++.++|.|+..++.... ..+.. ..+...+ +. +-..|-.+|+|.||.|+-++
T Consensus 220 ~~Y~~tvi~rIFy~~nrs~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~ 299 (493)
T KOG2562|consen 220 ERYAETVIQRIFYYLNRSRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKED 299 (493)
T ss_pred HHHHHHHhhhhheeeCCccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHH
Confidence 11234678888999999999998876532 11100 0001111 11 22236778999999999998
Q ss_pred HHHHHHHHhhhcccccCCCCCCCchhHHHHHH----hhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccC
Q 048599 243 FLENTYRTYKSYAEFEDDGDGTDFPSAEETFV----ELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDN 318 (354)
Q Consensus 243 F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~----~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~ 318 (354)
......... ...-+.++|. .+=.-.+|.++.++|..++-.+- ..-+..-++++|+-+|.+
T Consensus 300 L~ry~d~tl-------------t~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e---~k~t~~SleYwFrclDld 363 (493)
T KOG2562|consen 300 LKRYGDHTL-------------TERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEE---DKDTPASLEYWFRCLDLD 363 (493)
T ss_pred HHHHhccch-------------hhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhc---cCCCccchhhheeeeecc
Confidence 876543221 3445677888 33456789999999999887763 334566799999999999
Q ss_pred CCCCccHHHHHh
Q 048599 319 RDGNLTLDEMLN 330 (354)
Q Consensus 319 ~dG~Is~~EF~~ 330 (354)
++|.|+..|..-
T Consensus 364 ~~G~Lt~~el~~ 375 (493)
T KOG2562|consen 364 GDGILTLNELRY 375 (493)
T ss_pred CCCcccHHHHHH
Confidence 999999999877
No 68
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.40 E-value=1.3e-06 Score=63.94 Aligned_cols=68 Identities=24% Similarity=0.218 Sum_probs=56.1
Q ss_pred HHHHHHhchhhcCCC-CCCCcCHHHHHHHHH-HHhhhhc----HHHHHHHHHHHcCCCCCceeHHhHHHHhhhh
Q 048599 102 TSRLIYLFPLIDNEP-KDGVLSLNELDNWNV-ELAVDRL----SYTTQKQIELSDRDGDGEISFYEYLPQFSKQ 169 (354)
Q Consensus 102 ~~~l~~~F~~~D~d~-~dG~Is~~El~~~l~-~~~~~~~----~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~ 169 (354)
-..+...|.+++... ++|.|+.+||+.+|. .++...+ ...+..+|+.+|.|++|.|+|+||+.++...
T Consensus 7 i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 7 IETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 345888999999661 268999999999997 4444444 6889999999999999999999999988764
No 69
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.37 E-value=1.2e-06 Score=63.98 Aligned_cols=71 Identities=21% Similarity=0.278 Sum_probs=57.4
Q ss_pred hHhHHHHHHhHhcCC--CCCcccHHHHHHhhCCCCCCChHhh----HHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhh
Q 048599 180 QAGWWKEQFDNADVD--SNGTLNFDEFYNFLHPEDSNNTAIQ----RWLLREKLERMDDDNDGKLNLDEFLENTYRTYK 252 (354)
Q Consensus 180 ~~~~l~~~F~~~D~d--~~G~Is~~E~~~~l~~~~~~~~~~~----~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~ 252 (354)
.+..+...|..|+.. .+|.|+.+||+.++..... ..++ +..+..++..+|.+++|.|+|++|+.++.....
T Consensus 6 ~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g--~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~~ 82 (88)
T cd05030 6 AIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELP--NFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVGV 82 (88)
T ss_pred HHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhh--HhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 355677899999866 4899999999999974332 2344 678999999999999999999999998876543
No 70
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.37 E-value=1.6e-06 Score=70.74 Aligned_cols=64 Identities=27% Similarity=0.450 Sum_probs=56.2
Q ss_pred CchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhc
Q 048599 265 DFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNH 331 (354)
Q Consensus 265 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~ 331 (354)
.+..+..+|+.+|.+.||+|+..||+.++.++|.. .+---+..++...|.|.||+|||-||+=.
T Consensus 97 qIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgap---QTHL~lK~mikeVded~dgklSfreflLI 160 (244)
T KOG0041|consen 97 QIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAP---QTHLGLKNMIKEVDEDFDGKLSFREFLLI 160 (244)
T ss_pred HHHHHHHHHHHhcccccccccHHHHHHHHHHhCCc---hhhHHHHHHHHHhhcccccchhHHHHHHH
Confidence 45678899999999999999999999999999733 44455889999999999999999999983
No 71
>PF14658 EF-hand_9: EF-hand domain
Probab=98.36 E-value=1.4e-06 Score=58.74 Aligned_cols=61 Identities=20% Similarity=0.311 Sum_probs=56.9
Q ss_pred HhchhhcCCCCCCCcCHHHHHHHHHHHhh-hhcHHHHHHHHHHHcCCCC-CceeHHhHHHHhhh
Q 048599 107 YLFPLIDNEPKDGVLSLNELDNWNVELAV-DRLSYTTQKQIELSDRDGD-GEISFYEYLPQFSK 168 (354)
Q Consensus 107 ~~F~~~D~d~~dG~Is~~El~~~l~~~~~-~~~~~~~~~~~~~~D~~~d-G~I~~~EF~~~~~~ 168 (354)
.+|..+|.+ +.|.|...++..+|+..+. .+.+.+++.+.+.+|.++. |.|+++.|+..|..
T Consensus 2 ~~F~~fD~~-~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQ-KTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCc-CCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 379999999 9999999999999999998 7888899999999999988 99999999998875
No 72
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=98.35 E-value=5.2e-06 Score=85.30 Aligned_cols=135 Identities=16% Similarity=0.293 Sum_probs=105.7
Q ss_pred HHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhc-------HHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhc
Q 048599 102 TSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRL-------SYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKN 174 (354)
Q Consensus 102 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~-------~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~ 174 (354)
..++.-+|+-||++ ++|.++..+|+.+|+.+|...+ ....++.+..+|++.+|.|+..+|+.+|......+
T Consensus 2252 L~EFs~~fkhFDke-k~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeN- 2329 (2399)
T KOG0040|consen 2252 LKEFSMMFKHFDKE-KNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETEN- 2329 (2399)
T ss_pred HHHHHHHHHHhchh-hccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhccccc-
Confidence 34588899999999 9999999999999999998763 34789999999999999999999999998865432
Q ss_pred ccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCC----CCCCeeHHHHHHHHH
Q 048599 175 GMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDD----NDGKLNLDEFLENTY 248 (354)
Q Consensus 175 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d----~dg~I~~~eF~~~~~ 248 (354)
. .....+..+|+.+|. +..+|+..++.+.|. +...+-.+..+-..+++. --+.+.|.+|++.++
T Consensus 2330 -I--~s~~eIE~AfraL~a-~~~yvtke~~~~~lt------reqaefc~s~m~~~~e~~~~~s~q~~l~y~dfv~sl~ 2397 (2399)
T KOG0040|consen 2330 -I--LSSEEIEDAFRALDA-GKPYVTKEELYQNLT------REQAEFCMSKMKPYAETSSGRSDQVALDYKDFVNSLF 2397 (2399)
T ss_pred -c--cchHHHHHHHHHhhc-CCccccHHHHHhcCC------HHHHHHHHHHhhhhcccccCCCccccccHHHHHHHHh
Confidence 1 122368889999999 889999999988775 333343445555556653 224589999988765
No 73
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=98.31 E-value=4.9e-06 Score=85.45 Aligned_cols=138 Identities=18% Similarity=0.228 Sum_probs=103.9
Q ss_pred ccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHH-----HHHHHHHhhcCCCCCCeeHHHHHHHHHH
Q 048599 175 GMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRW-----LLREKLERMDDDNDGKLNLDEFLENTYR 249 (354)
Q Consensus 175 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~-----~~~~l~~~~D~d~dg~I~~~eF~~~~~~ 249 (354)
..+.+.+..+.-+|+.||++.+|.++..+|..+|+..|...|. .++ .++.++...|++.+|.|+..+|+.+|..
T Consensus 2246 GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpm-vEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~ 2324 (2399)
T KOG0040|consen 2246 GVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPM-VEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMIS 2324 (2399)
T ss_pred CCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcc-cccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHh
Confidence 3455566777889999999999999999999999999875443 333 7899999999999999999999999885
Q ss_pred HhhhcccccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHH----HhccC----CCC
Q 048599 250 TYKSYAEFEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIH----EADDN----RDG 321 (354)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~----~~D~~----~dG 321 (354)
.-. ++ ......+..+|+.+|. +.-||+..++..- ++.++++..+. .+|+. --+
T Consensus 2325 ~ET----eN----I~s~~eIE~AfraL~a-~~~yvtke~~~~~----------ltreqaefc~s~m~~~~e~~~~~s~q~ 2385 (2399)
T KOG0040|consen 2325 KET----EN----ILSSEEIEDAFRALDA-GKPYVTKEELYQN----------LTREQAEFCMSKMKPYAETSSGRSDQV 2385 (2399)
T ss_pred ccc----cc----ccchHHHHHHHHHhhc-CCccccHHHHHhc----------CCHHHHHHHHHHhhhhcccccCCCccc
Confidence 432 11 1134578999999998 8889999998663 34455554444 45553 234
Q ss_pred CccHHHHHhcH
Q 048599 322 NLTLDEMLNHE 332 (354)
Q Consensus 322 ~Is~~EF~~~~ 332 (354)
.|.|.+|++.+
T Consensus 2386 ~l~y~dfv~sl 2396 (2399)
T KOG0040|consen 2386 ALDYKDFVNSL 2396 (2399)
T ss_pred cccHHHHHHHH
Confidence 58888888744
No 74
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.25 E-value=5.4e-06 Score=67.70 Aligned_cols=67 Identities=28% Similarity=0.411 Sum_probs=61.1
Q ss_pred HHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhh
Q 048599 103 SRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQD 170 (354)
Q Consensus 103 ~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~ 170 (354)
..+..+|.++|.+ .||+|+..||+.+|.++|.+-+.--+..+++.+|.|.+|+|+|.||+-++....
T Consensus 99 k~~~~~Fk~yDe~-rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaa 165 (244)
T KOG0041|consen 99 KDAESMFKQYDED-RDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAA 165 (244)
T ss_pred HHHHHHHHHhccc-ccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHh
Confidence 4478899999999 999999999999999999888778889999999999999999999998877644
No 75
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.25 E-value=1e-06 Score=49.63 Aligned_cols=28 Identities=32% Similarity=0.546 Sum_probs=21.5
Q ss_pred HHHHHHhhcCCCCCCcCHHHHHHHHHhh
Q 048599 269 AEETFVELDTNKDKLLEVEELKPIFSYL 296 (354)
Q Consensus 269 ~~~~F~~~D~d~dG~Is~~El~~~l~~~ 296 (354)
++.+|+.+|+|+||+|+.+||..+++.+
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 5677888888888888888888877653
No 76
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.20 E-value=6.5e-06 Score=59.61 Aligned_cols=66 Identities=14% Similarity=0.211 Sum_probs=54.3
Q ss_pred HHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhh-----hcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhh
Q 048599 103 SRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVD-----RLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQD 170 (354)
Q Consensus 103 ~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~-----~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~ 170 (354)
.-|..+|.++..+ .|.++..||+.++...-.. ..+..++++|+.+|.|+||.|+|.||+.++....
T Consensus 8 ~~lI~~FhkYaG~--~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~ 78 (91)
T cd05024 8 EKMMLTFHKFAGE--KNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLL 78 (91)
T ss_pred HHHHHHHHHHcCC--CCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 3478899999966 6799999999998654322 2356889999999999999999999999987753
No 77
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.11 E-value=6.4e-06 Score=59.65 Aligned_cols=71 Identities=13% Similarity=0.229 Sum_probs=54.2
Q ss_pred chhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCC--CCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhhhhccccC
Q 048599 266 FPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGE--ISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYIFYNTVYN 341 (354)
Q Consensus 266 ~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~--~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~f~~~~~~ 341 (354)
...+..+|..|- -+.|.++..||+.++..--|.- ..-++..++.+|+.+|.|+||.|+|+||+. +++.+..
T Consensus 7 i~~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~----Lv~~l~~ 79 (91)
T cd05024 7 MEKMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFS----LIAGLLI 79 (91)
T ss_pred HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHH----HHHHHHH
Confidence 345667898886 3456999999999997433211 123577899999999999999999999999 6665543
No 78
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.06 E-value=3.7e-06 Score=47.32 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=12.9
Q ss_pred HHHhchhhcCCCCCCCcCHHHHHHHHH
Q 048599 105 LIYLFPLIDNEPKDGVLSLNELDNWNV 131 (354)
Q Consensus 105 l~~~F~~~D~d~~dG~Is~~El~~~l~ 131 (354)
++.+|+.+|+| +||+|+.+||..+++
T Consensus 2 ~~~~F~~~D~d-~dG~I~~~Ef~~~~~ 27 (29)
T PF00036_consen 2 LKEAFREFDKD-GDGKIDFEEFKEMMK 27 (29)
T ss_dssp HHHHHHHHSTT-SSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCC-CCCcCCHHHHHHHHH
Confidence 34455555555 555555555554443
No 79
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.98 E-value=7.4e-06 Score=47.10 Aligned_cols=29 Identities=31% Similarity=0.535 Sum_probs=25.1
Q ss_pred HHHHHHhhcCCCCCCcCHHHHHHHHH-hhC
Q 048599 269 AEETFVELDTNKDKLLEVEELKPIFS-YLH 297 (354)
Q Consensus 269 ~~~~F~~~D~d~dG~Is~~El~~~l~-~~~ 297 (354)
++.+|+.+|+|++|+|+.+||+.+|+ .+|
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 67899999999999999999999998 563
No 80
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.92 E-value=8.8e-06 Score=46.79 Aligned_cols=27 Identities=30% Similarity=0.464 Sum_probs=23.3
Q ss_pred HHHHhchhhcCCCCCCCcCHHHHHHHHH
Q 048599 104 RLIYLFPLIDNEPKDGVLSLNELDNWNV 131 (354)
Q Consensus 104 ~l~~~F~~~D~d~~dG~Is~~El~~~l~ 131 (354)
+++.+|..+|.| ++|+|+.+||..+|+
T Consensus 1 ~l~~~F~~~D~d-~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKD-GDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TT-SSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCC-CCCcCcHHHHHHHHH
Confidence 478899999999 999999999999887
No 81
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.91 E-value=5.4e-05 Score=73.49 Aligned_cols=126 Identities=20% Similarity=0.239 Sum_probs=98.4
Q ss_pred CCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhh----------------------
Q 048599 116 PKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEK---------------------- 173 (354)
Q Consensus 116 ~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~---------------------- 173 (354)
|+.|+|+-..-+.++...+. ....+..+|...|.|+||+++..||.-.|.......
T Consensus 27 p~~gfitg~qArnfflqS~L--P~~VLaqIWALsDldkDGrmdi~EfSIAmkLi~lkLqG~~lP~~LPPsll~~~~~~~p 104 (1118)
T KOG1029|consen 27 PGQGFITGDQARNFFLQSGL--PTPVLAQIWALSDLDKDGRMDIREFSIAMKLIKLKLQGIQLPPVLPPSLLKQPPRNAP 104 (1118)
T ss_pred CCCCccchHhhhhhHHhcCC--ChHHHHHHHHhhhcCccccchHHHHHHHHHHHHHHhcCCcCCCCCChHHhccCCcCCC
Confidence 36899999999998876664 347788899999999999999999987766432110
Q ss_pred -----------------------------------------------------------------------c--------
Q 048599 174 -----------------------------------------------------------------------N-------- 174 (354)
Q Consensus 174 -----------------------------------------------------------------------~-------- 174 (354)
.
T Consensus 105 ~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~spl~~~ss~se~~~~~~s~~q~ 184 (1118)
T KOG1029|consen 105 STWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNSPLPHDSSVSEGRPSIESVNQL 184 (1118)
T ss_pred CCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCcchhhcCccchhhhhh
Confidence 0
Q ss_pred ---ccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 175 ---GMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 175 ---~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
.........++..|+.+|+..+|+||...-+.+|...+. ....+..++...|.|+||+++-+||+-.+.
T Consensus 185 ~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~L-----pq~~LA~IW~LsDvd~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 185 EEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQSGL-----PQNQLAHIWTLSDVDGDGKLSADEFILAMH 256 (1118)
T ss_pred hhccccchhhhHHHHHhhhcccccccccccHHHHHHHHhcCC-----chhhHhhheeeeccCCCCcccHHHHHHHHH
Confidence 001112234688999999999999999999999976653 444688999999999999999999987664
No 82
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.90 E-value=2.4e-05 Score=49.65 Aligned_cols=47 Identities=28% Similarity=0.592 Sum_probs=38.9
Q ss_pred cCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhhhhc
Q 048599 284 LEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYIFYN 337 (354)
Q Consensus 284 Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~f~~ 337 (354)
+|..|++.+|+.+ ++.+++..+..||+.+|.+++|+|.-+||.. ||.
T Consensus 2 msf~Evk~lLk~~---NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~----Fy~ 48 (51)
T PF14788_consen 2 MSFKEVKKLLKMM---NIEMDDEYARQLFQECDKSQSGRLEGEEFEE----FYK 48 (51)
T ss_dssp BEHHHHHHHHHHT---T----HHHHHHHHHHH-SSSSSEBEHHHHHH----HHH
T ss_pred CCHHHHHHHHHHH---ccCcCHHHHHHHHHHhcccCCCCccHHHHHH----HHH
Confidence 6889999999988 4779999999999999999999999999999 765
No 83
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.90 E-value=3e-05 Score=58.19 Aligned_cols=69 Identities=23% Similarity=0.338 Sum_probs=57.3
Q ss_pred cccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHH
Q 048599 176 MVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRT 250 (354)
Q Consensus 176 ~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~ 250 (354)
++..+...+..+|..+|. ++|.|+..+...++...+ +....+.++|...|.+++|.++++||+-++.-.
T Consensus 4 ls~~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~-----L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 4 LSPEEKQKYDQIFQSLDP-QDGKISGDQAREFFMKSG-----LPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp -SCCHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHTT-----SSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcC-----CCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 455677889999999985 689999999999998776 455679999999999999999999998876543
No 84
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.87 E-value=4.5e-05 Score=57.22 Aligned_cols=64 Identities=19% Similarity=0.297 Sum_probs=55.0
Q ss_pred HHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhh
Q 048599 102 TSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQ 169 (354)
Q Consensus 102 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~ 169 (354)
..++..+|..+|. ++|.|+..+...++...+. ....+..+|...|.+++|.++++||+..|.-.
T Consensus 9 ~~~y~~~F~~l~~--~~g~isg~~a~~~f~~S~L--~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 9 KQKYDQIFQSLDP--QDGKISGDQAREFFMKSGL--PRDVLAQIWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp HHHHHHHHHCTSS--STTEEEHHHHHHHHHHTTS--SHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC--CCCeEeHHHHHHHHHHcCC--CHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 6779999999984 5899999999999876664 45889999999999999999999999987753
No 85
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.80 E-value=2e-05 Score=42.65 Aligned_cols=23 Identities=26% Similarity=0.569 Sum_probs=16.6
Q ss_pred HHHHHhhcCCCCCCcCHHHHHHH
Q 048599 270 EETFVELDTNKDKLLEVEELKPI 292 (354)
Q Consensus 270 ~~~F~~~D~d~dG~Is~~El~~~ 292 (354)
+.+|+.+|.|+||.||.+||.++
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHH
Confidence 45677777777777777777664
No 86
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.76 E-value=9.6e-06 Score=62.06 Aligned_cols=61 Identities=34% Similarity=0.453 Sum_probs=45.4
Q ss_pred CchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 265 DFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 265 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
....+.-.|..+|.|+||.|+..|++.+...+. ..+.-+..++..+|.|+||.||+.|+..
T Consensus 52 ~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l~-----~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 52 CKRVVHWKFCQLDRNKDGVLDRSELKPLRRPLM-----PPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp GHHHHHHHHHHH--T-SSEE-TTTTGGGGSTTS-----TTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhhHhhhcCCCCCccCHHHHHHHHHHHh-----hhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 456678889999999999999999999876553 2244578899999999999999999864
No 87
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=97.75 E-value=4.6e-05 Score=66.95 Aligned_cols=119 Identities=11% Similarity=0.058 Sum_probs=92.7
Q ss_pred CCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhcccccCCCCCCCchhHHHH
Q 048599 193 VDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFEDDGDGTDFPSAEET 272 (354)
Q Consensus 193 ~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (354)
.-+.+.|-..||...++-- .+ +.+..+|..+|.+++|.++|.|.+..+.-..+ +......++-+
T Consensus 238 ~~kg~~igi~efa~~l~vp------vs-d~l~~~f~LFde~~tg~~D~re~v~~lavlc~---------p~~t~~iiq~a 301 (412)
T KOG4666|consen 238 EAKGPDIGIVEFAVNLRVP------VS-DKLAPTFMLFDEGTTGNGDYRETVKTLAVLCG---------PPVTPVIIQYA 301 (412)
T ss_pred hccCCCcceeEeeeeeecc------hh-hhhhhhhheecCCCCCcccHHHHhhhheeeeC---------CCCcHHHHHHH
Confidence 3456677777777666522 12 45778999999999999999999887764443 33366778999
Q ss_pred HHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhc
Q 048599 273 FVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNH 331 (354)
Q Consensus 273 F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~ 331 (354)
|+.|+.+.||.+...+|.-+|+... .+..-.+-.+|...+...+|+|++++|.+.
T Consensus 302 fk~f~v~eDg~~ge~~ls~ilq~~l----gv~~l~v~~lf~~i~q~d~~ki~~~~f~~f 356 (412)
T KOG4666|consen 302 FKRFSVAEDGISGEHILSLILQVVL----GVEVLRVPVLFPSIEQKDDPKIYASNFRKF 356 (412)
T ss_pred HHhcccccccccchHHHHHHHHHhc----CcceeeccccchhhhcccCcceeHHHHHHH
Confidence 9999999999999999999988652 233445778999999999999999999983
No 88
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.73 E-value=0.00015 Score=67.57 Aligned_cols=51 Identities=29% Similarity=0.304 Sum_probs=45.6
Q ss_pred CchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhc
Q 048599 265 DFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNH 331 (354)
Q Consensus 265 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~ 331 (354)
....+..+|+.+|.|++|.|+.+||.. ++.+|..+|.|+||.|+++||...
T Consensus 332 ~~~~l~~aF~~~D~dgdG~Is~~E~~~----------------~~~~F~~~D~d~DG~Is~eEf~~~ 382 (391)
T PRK12309 332 FTHAAQEIFRLYDLDGDGFITREEWLG----------------SDAVFDALDLNHDGKITPEEMRAG 382 (391)
T ss_pred hhHHHHHHHHHhCCCCCCcCcHHHHHH----------------HHHHHHHhCCCCCCCCcHHHHHHH
Confidence 566788999999999999999999831 478899999999999999999993
No 89
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.73 E-value=2.6e-05 Score=42.21 Aligned_cols=23 Identities=26% Similarity=0.443 Sum_probs=13.5
Q ss_pred HHhchhhcCCCCCCCcCHHHHHHH
Q 048599 106 IYLFPLIDNEPKDGVLSLNELDNW 129 (354)
Q Consensus 106 ~~~F~~~D~d~~dG~Is~~El~~~ 129 (354)
+.+|..+|.| +||.|+.+||.++
T Consensus 2 ~~~F~~~D~d-~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTD-GDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTT-SSSEEEHHHHHHH
T ss_pred HHHHHHHcCC-CCCcCCHHHHHHH
Confidence 4456666666 6666666666553
No 90
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=97.61 E-value=0.00089 Score=65.71 Aligned_cols=142 Identities=21% Similarity=0.342 Sum_probs=114.9
Q ss_pred chHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhccccc
Q 048599 179 GQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFE 258 (354)
Q Consensus 179 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~ 258 (354)
....||..+|...|++++|.++..+...++..+. ..+....+..+++..+..+++++...+|........
T Consensus 133 ~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n---~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~------- 202 (746)
T KOG0169|consen 133 RREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLN---VQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELT------- 202 (746)
T ss_pred hHHHHHHHHHHHHccccccccchhhHHHHHHHHH---HhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhc-------
Confidence 3457889999999999999999999999998776 567777788899999989999999999988665432
Q ss_pred CCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccC----CCCCccHHHHHhcHhh
Q 048599 259 DDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDN----RDGNLTLDEMLNHEYI 334 (354)
Q Consensus 259 ~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~----~dG~Is~~EF~~~~~~ 334 (354)
....+..+|..+- .+.++++..+|..+|.... ++...+...++.|++.+-.. ..+.++++.|.+
T Consensus 203 ------~rpev~~~f~~~s-~~~~~ls~~~L~~Fl~~~q-~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~---- 270 (746)
T KOG0169|consen 203 ------KRPEVYFLFVQYS-HGKEYLSTDDLLRFLEEEQ-GEDGATLDEAEEIIERYEPSKEFRRHGLLSLDGFTR---- 270 (746)
T ss_pred ------cCchHHHHHHHHh-CCCCccCHHHHHHHHHHhc-ccccccHHHHHHHHHHhhhhhhccccceecHHHHHH----
Confidence 2337888898874 4489999999999999874 55668888899999877544 346699999999
Q ss_pred hhccccCC
Q 048599 335 FYNTVYND 342 (354)
Q Consensus 335 f~~~~~~~ 342 (354)
|+-|.-.+
T Consensus 271 yL~S~~~~ 278 (746)
T KOG0169|consen 271 YLFSPDCN 278 (746)
T ss_pred HhcCccCC
Confidence 87666554
No 91
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.59 E-value=0.00013 Score=68.03 Aligned_cols=55 Identities=22% Similarity=0.268 Sum_probs=48.2
Q ss_pred cHHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhh
Q 048599 100 NITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSK 168 (354)
Q Consensus 100 ~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~ 168 (354)
..+..+..+|..+|.+ +||.|+.+||.. +..+|..+|.|+||.|+++||...+..
T Consensus 331 ~~~~~l~~aF~~~D~d-gdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 331 AFTHAAQEIFRLYDLD-GDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred hhhHHHHHHHHHhCCC-CCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 3556788999999999 999999999942 467899999999999999999998765
No 92
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.55 E-value=0.0006 Score=52.16 Aligned_cols=59 Identities=24% Similarity=0.310 Sum_probs=42.3
Q ss_pred hHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHH
Q 048599 182 GWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLE 245 (354)
Q Consensus 182 ~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~ 245 (354)
..+.-.|..+|.|+||.|+..|+..+...+.. .+.-+..++...|.|+||.|+..||..
T Consensus 54 ~~~~W~F~~LD~n~d~~L~~~El~~l~~~l~~-----~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 54 RVVHWKFCQLDRNKDGVLDRSELKPLRRPLMP-----PEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHHHH--T-SSEE-TTTTGGGGSTTST-----TGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhHhhhcCCCCCccCHHHHHHHHHHHhh-----hHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 34555899999999999999999998876632 122467899999999999999999975
No 93
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.52 E-value=0.0009 Score=65.35 Aligned_cols=139 Identities=17% Similarity=0.194 Sum_probs=101.4
Q ss_pred HHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhccccc------
Q 048599 185 KEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFE------ 258 (354)
Q Consensus 185 ~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~------ 258 (354)
...|..+ +-+.|+|+...-+.++-..+. | .-.+.+++...|.|+||+++..||.-.|....-++..-.
T Consensus 19 ~~qF~~L-kp~~gfitg~qArnfflqS~L--P---~~VLaqIWALsDldkDGrmdi~EfSIAmkLi~lkLqG~~lP~~LP 92 (1118)
T KOG1029|consen 19 DAQFGQL-KPGQGFITGDQARNFFLQSGL--P---TPVLAQIWALSDLDKDGRMDIREFSIAMKLIKLKLQGIQLPPVLP 92 (1118)
T ss_pred HHHHhcc-CCCCCccchHhhhhhHHhcCC--C---hHHHHHHHHhhhcCccccchHHHHHHHHHHHHHHhcCCcCCCCCC
Confidence 3355554 457899999999999887765 2 234778999999999999999999765532111100000
Q ss_pred -----------C-CC-----------------------------------------------------------------
Q 048599 259 -----------D-DG----------------------------------------------------------------- 261 (354)
Q Consensus 259 -----------~-~~----------------------------------------------------------------- 261 (354)
. ..
T Consensus 93 Psll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~spl~~~ss~s 172 (1118)
T KOG1029|consen 93 PSLLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNSPLPHDSSVS 172 (1118)
T ss_pred hHHhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCcchh
Confidence 0 00
Q ss_pred -----------------CCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCcc
Q 048599 262 -----------------DGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLT 324 (354)
Q Consensus 262 -----------------~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is 324 (354)
+....-+.+++|+.+|+..+|++|-..-+.+|... .++..++.+|+...|.|+||+++
T Consensus 173 e~~~~~~s~~q~~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS-----~Lpq~~LA~IW~LsDvd~DGkL~ 247 (1118)
T KOG1029|consen 173 EGRPSIESVNQLEEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQS-----GLPQNQLAHIWTLSDVDGDGKLS 247 (1118)
T ss_pred hcCccchhhhhhhhccccchhhhHHHHHhhhcccccccccccHHHHHHHHhc-----CCchhhHhhheeeeccCCCCccc
Confidence 00012347789999999999999999999987654 37788899999999999999999
Q ss_pred HHHHHhcHhh
Q 048599 325 LDEMLNHEYI 334 (354)
Q Consensus 325 ~~EF~~~~~~ 334 (354)
-+||+=++..
T Consensus 248 ~dEfilam~l 257 (1118)
T KOG1029|consen 248 ADEFILAMHL 257 (1118)
T ss_pred HHHHHHHHHH
Confidence 9999876644
No 94
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=97.52 E-value=6.3e-05 Score=66.11 Aligned_cols=119 Identities=12% Similarity=0.027 Sum_probs=89.1
Q ss_pred CCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccchHhHHHHHHhHhcCCCC
Q 048599 117 KDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQAGWWKEQFDNADVDSN 196 (354)
Q Consensus 117 ~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~ 196 (354)
+.+.|...|+..-++- +..+.+..+|..||.+++|.++|.|++..+....... ....-++-+|+.|+.+.|
T Consensus 240 kg~~igi~efa~~l~v----pvsd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~-----~t~~iiq~afk~f~v~eD 310 (412)
T KOG4666|consen 240 KGPDIGIVEFAVNLRV----PVSDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPP-----VTPVIIQYAFKRFSVAED 310 (412)
T ss_pred cCCCcceeEeeeeeec----chhhhhhhhhheecCCCCCcccHHHHhhhheeeeCCC-----CcHHHHHHHHHhcccccc
Confidence 4556666666554321 2236678889999999999999999999887765321 223446779999999999
Q ss_pred CcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 197 GTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 197 G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
|.+...+|..+|+...+ +..-.+..+|...+...+|+|++.+|..++.
T Consensus 311 g~~ge~~ls~ilq~~lg----v~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~ 358 (412)
T KOG4666|consen 311 GISGEHILSLILQVVLG----VEVLRVPVLFPSIEQKDDPKIYASNFRKFAA 358 (412)
T ss_pred cccchHHHHHHHHHhcC----cceeeccccchhhhcccCcceeHHHHHHHHH
Confidence 99999999999876543 1122356789999999999999999988664
No 95
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.52 E-value=0.0001 Score=75.39 Aligned_cols=218 Identities=18% Similarity=0.173 Sum_probs=162.0
Q ss_pred HHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhh----------
Q 048599 104 RLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEK---------- 173 (354)
Q Consensus 104 ~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~---------- 173 (354)
.+..+|+.+|.. ++|.|+..+-..++...+. ....+-.+|...|..+.|.++..+|...+.......
T Consensus 12 ~~~~~~~~~d~~-~~G~i~g~~a~~f~~~s~L--~~qvl~qiws~~d~~~~g~l~~q~f~~~lrlva~aq~~~~~~~~~~ 88 (847)
T KOG0998|consen 12 LFDQYFKSADPQ-GDGRITGAEAVAFLSKSGL--PDQVLGQIWSLADSSGKGFLNRQGFYAALRLVAQAQSGRELSAKKV 88 (847)
T ss_pred hHHHhhhccCcc-cCCcccHHHhhhhhhcccc--chhhhhccccccccccCCccccccccccchHhhhhhcccCcCcccc
Confidence 367899999999 9999999999998876664 346777889999999999999999987665433211
Q ss_pred --------------------------------cccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHH
Q 048599 174 --------------------------------NGMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRW 221 (354)
Q Consensus 174 --------------------------------~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~ 221 (354)
......+...+..+|..+.+. +|.++....+.+|..... ...
T Consensus 89 ~~~~~~pp~~~~~~~~~~~~~~~~~~s~~~~~p~~~~qe~aky~q~f~s~~p~-~g~~sg~~~~pil~~s~L-----p~~ 162 (847)
T KOG0998|consen 89 LPASAVPPPPKISHDTSPPSRPSSSTSAAPFVPAITPQEQAKYDQIFRSLSPS-NGLLSGDKAKPILLNSKL-----PSD 162 (847)
T ss_pred ccccCCCCCCccCccCCCcccCCCCCCCcccCCCCCHHHHHHHHHHHhccCCC-CCccccchhhhhhhcCCC-----Chh
Confidence 112233445566678888765 899999998888876653 344
Q ss_pred HHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhcc--cccC----------------------------------------
Q 048599 222 LLREKLERMDDDNDGKLNLDEFLENTYRTYKSYA--EFED---------------------------------------- 259 (354)
Q Consensus 222 ~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~--~~~~---------------------------------------- 259 (354)
.+.+++...|.+.+|.+++.||.-.+......+. .+..
T Consensus 163 ~l~~iw~l~d~d~~g~Ld~~ef~~am~l~~~~l~~~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (847)
T KOG0998|consen 163 VLGRIWELSDIDKDGNLDRDEFAVAMHLINDLLNGNSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASPTT 242 (847)
T ss_pred hhccccccccccccCCCChhhhhhhhhHHHHHhhcccCCCCccCCcccCCcchhcccccCcccccccccccccccccccc
Confidence 5668899999999999999999877654333222 0000
Q ss_pred ---------------------------------CCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHH
Q 048599 260 ---------------------------------DGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKY 306 (354)
Q Consensus 260 ---------------------------------~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~ 306 (354)
...........++|...|.+++|.|+..+...++... .++..
T Consensus 243 ~~~l~~~s~~~~~~s~~~~~~~~~~q~~~s~~~~vsp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~~-----gl~~~ 317 (847)
T KOG0998|consen 243 LSSLVDLSALNSNPSLSSLSLASSMQLIVSWSPKVSPSDKQKYSKIFSQVDKDNDGSISSNEARNIFLPF-----GLSKP 317 (847)
T ss_pred cccccchhcccCCccccccccccccccccccCcccChHHHHHHHHHHHhccccCCCcccccccccccccC-----CCChh
Confidence 0001112446668999999999999999999987654 37788
Q ss_pred HHHHHHHHhccCCCCCccHHHHHhcHhhh
Q 048599 307 YSRHLIHEADDNRDGNLTLDEMLNHEYIF 335 (354)
Q Consensus 307 ~~~~l~~~~D~~~dG~Is~~EF~~~~~~f 335 (354)
.+.+++...|+.+.|.|++.+|.-.++.-
T Consensus 318 ~l~~~w~l~d~~n~~~ls~~ef~~~~~~~ 346 (847)
T KOG0998|consen 318 RLAHVWLLADTQNTGTLSKDEFALAMHLL 346 (847)
T ss_pred hhhhhhhhcchhccCcccccccchhhhhh
Confidence 99999999999999999999887755443
No 96
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.27 E-value=0.00087 Score=42.60 Aligned_cols=48 Identities=10% Similarity=0.195 Sum_probs=39.3
Q ss_pred cCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhh
Q 048599 121 LSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSK 168 (354)
Q Consensus 121 Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~ 168 (354)
+|..|++.+|+.+........+..+|+..|++++|.+..+||..++..
T Consensus 2 msf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp BEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 678999999999998888889999999999999999999999997654
No 97
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=97.25 E-value=0.0033 Score=61.88 Aligned_cols=138 Identities=19% Similarity=0.217 Sum_probs=109.3
Q ss_pred cHHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccc
Q 048599 100 NITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHG 179 (354)
Q Consensus 100 ~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~ 179 (354)
+....+...|+..|++ ++|.++..+...+++.+........+.++|+..+..+++++.+.+|..+......
T Consensus 133 ~~~~wi~~~~~~ad~~-~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~-------- 203 (746)
T KOG0169|consen 133 RREHWIHSIFQEADKN-KNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTK-------- 203 (746)
T ss_pred hHHHHHHHHHHHHccc-cccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhcc--------
Confidence 3456788999999999 9999999999999999998888888999999999999999999999997665321
Q ss_pred hHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCC----CCCCeeHHHHHHHHHH
Q 048599 180 QAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDD----NDGKLNLDEFLENTYR 249 (354)
Q Consensus 180 ~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d----~dg~I~~~eF~~~~~~ 249 (354)
.. .+...|..+-.+ .++++..++..+|..... ........+++++..+... ..+.++++.|..++..
T Consensus 204 rp-ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q~-e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL~S 274 (746)
T KOG0169|consen 204 RP-EVYFLFVQYSHG-KEYLSTDDLLRFLEEEQG-EDGATLDEAEEIIERYEPSKEFRRHGLLSLDGFTRYLFS 274 (746)
T ss_pred Cc-hHHHHHHHHhCC-CCccCHHHHHHHHHHhcc-cccccHHHHHHHHHHhhhhhhccccceecHHHHHHHhcC
Confidence 12 467778777544 899999999999976632 2345556677777666433 4566999999998864
No 98
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=97.22 E-value=0.00078 Score=63.15 Aligned_cols=77 Identities=19% Similarity=0.265 Sum_probs=65.2
Q ss_pred cccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHh
Q 048599 174 NGMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTY 251 (354)
Q Consensus 174 ~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~ 251 (354)
.+.+..++..++..|...| |++|+|+..++..++...+...-....+++++++...+.|.+|+|+|++|+..+....
T Consensus 11 ~~~tq~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~ 87 (627)
T KOG0046|consen 11 SQLTQEELRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLK 87 (627)
T ss_pred ccccHHHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhh
Confidence 4556677888999999999 9999999999999998776544445678999999999999999999999999765443
No 99
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.13 E-value=0.0064 Score=45.36 Aligned_cols=58 Identities=22% Similarity=0.258 Sum_probs=45.1
Q ss_pred HhchhhcCCCCCCCcCHHHHHHHHHHHhhh----------hcHHHHHH----HHHHHcCCCCCceeHHhHHHH
Q 048599 107 YLFPLIDNEPKDGVLSLNELDNWNVELAVD----------RLSYTTQK----QIELSDRDGDGEISFYEYLPQ 165 (354)
Q Consensus 107 ~~F~~~D~d~~dG~Is~~El~~~l~~~~~~----------~~~~~~~~----~~~~~D~~~dG~I~~~EF~~~ 165 (354)
-.|+..|-| ++|+|+--||..++...... .+..++.+ +++.-|.|+||.|+|-||+..
T Consensus 71 HYF~MHDld-knn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 71 HYFSMHDLD-KNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhccC-cCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 589999999 99999999999988765441 11234444 456778999999999999874
No 100
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=97.13 E-value=0.0011 Score=62.17 Aligned_cols=68 Identities=18% Similarity=0.242 Sum_probs=58.8
Q ss_pred chhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhh
Q 048599 266 FPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYI 334 (354)
Q Consensus 266 ~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~ 334 (354)
...++..|...| |++|+|+..|+..++...+........++++.++...+.|.+|+|+|+||+..+..
T Consensus 18 l~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~ 85 (627)
T KOG0046|consen 18 LRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLN 85 (627)
T ss_pred HHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHh
Confidence 445778999999 99999999999999998764445567899999999999999999999999995544
No 101
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=96.85 E-value=0.0041 Score=59.57 Aligned_cols=156 Identities=19% Similarity=0.208 Sum_probs=92.9
Q ss_pred cccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCC-hHhhHHHHHHHHHhhcCCC--CCCeeHHHHHHHHHHH
Q 048599 174 NGMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNN-TAIQRWLLREKLERMDDDN--DGKLNLDEFLENTYRT 250 (354)
Q Consensus 174 ~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~-~~~~~~~~~~l~~~~D~d~--dg~I~~~eF~~~~~~~ 250 (354)
+++....+..|.++|+..|.|.+|.++-.|+..+-......+ .......++..+...-++| +..++...|+......
T Consensus 187 qelkp~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lf 266 (625)
T KOG1707|consen 187 QELKPRCVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLF 266 (625)
T ss_pred ccccHHHHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHH
Confidence 445555677899999999999999999999988765443211 1122234444444443332 4456777776644322
Q ss_pred hhh------------cccccCCC--------------------CCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCC
Q 048599 251 YKS------------YAEFEDDG--------------------DGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHP 298 (354)
Q Consensus 251 ~~~------------~~~~~~~~--------------------~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~ 298 (354)
+.. +......+ ...-..-+..+|..||.|+||.++..||..++.....
T Consensus 267 iergr~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~ 346 (625)
T KOG1707|consen 267 IERGRHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPG 346 (625)
T ss_pred HHhccccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCC
Confidence 211 11111000 0111345788999999999999999999999986642
Q ss_pred CCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhh
Q 048599 299 GEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYI 334 (354)
Q Consensus 299 ~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~ 334 (354)
..+.-+.. .+ ..-.+..|.++++-|+..|..
T Consensus 347 ~pW~~~~~-~~----~t~~~~~G~ltl~g~l~~WsL 377 (625)
T KOG1707|consen 347 SPWTSSPY-KD----STVKNERGWLTLNGFLSQWSL 377 (625)
T ss_pred CCCCCCcc-cc----cceecccceeehhhHHHHHHH
Confidence 22110100 00 011236799999999986644
No 102
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.68 E-value=0.0041 Score=46.37 Aligned_cols=60 Identities=23% Similarity=0.248 Sum_probs=45.4
Q ss_pred HHHHhhcCCCCCCcCHHHHHHHHHhhCC-------CCCCcHHHHHHHH----HHHhccCCCCCccHHHHHh
Q 048599 271 ETFVELDTNKDKLLEVEELKPIFSYLHP-------GEISYAKYYSRHL----IHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 271 ~~F~~~D~d~dG~Is~~El~~~l~~~~~-------~~~~~~~~~~~~l----~~~~D~~~dG~Is~~EF~~ 330 (354)
..|+..|.|++|.|+--|+..++...+. .-...++.+++.+ +..-|.|+||.|+|-||++
T Consensus 71 HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK 141 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLK 141 (144)
T ss_pred hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHh
Confidence 4688899999999999999999885432 1122445555544 5567889999999999987
No 103
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=96.48 E-value=0.006 Score=43.87 Aligned_cols=68 Identities=22% Similarity=0.367 Sum_probs=55.7
Q ss_pred HHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccC----CCCCccHHHHHhcHhhhhccccCC
Q 048599 269 AEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDN----RDGNLTLDEMLNHEYIFYNTVYND 342 (354)
Q Consensus 269 ~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~----~dG~Is~~EF~~~~~~f~~~~~~~ 342 (354)
+..+|..+-. +.+.||.++|...|.... +....+..++..++..+..+ ..+.+|+++|.. |+.|...+
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ-~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~----fL~S~~N~ 73 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQ-GEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTR----FLFSDENS 73 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTS-S-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHH----HHHSTTCB
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHh-ccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHH----HHCCCcCC
Confidence 6788999954 789999999999998764 33456899999999998665 479999999999 88777653
No 104
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.28 E-value=0.0064 Score=33.07 Aligned_cols=27 Identities=26% Similarity=0.443 Sum_probs=20.7
Q ss_pred HHHHHHhhcCCCCCCcCHHHHHHHHHh
Q 048599 269 AEETFVELDTNKDKLLEVEELKPIFSY 295 (354)
Q Consensus 269 ~~~~F~~~D~d~dG~Is~~El~~~l~~ 295 (354)
++.+|+.+|.+++|.|+..||..+++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 456788888888888888888877654
No 105
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.89 E-value=0.0077 Score=32.72 Aligned_cols=26 Identities=27% Similarity=0.448 Sum_probs=16.0
Q ss_pred HHHhchhhcCCCCCCCcCHHHHHHHHH
Q 048599 105 LIYLFPLIDNEPKDGVLSLNELDNWNV 131 (354)
Q Consensus 105 l~~~F~~~D~d~~dG~Is~~El~~~l~ 131 (354)
++.+|..+|.+ ++|.|+..||..++.
T Consensus 2 ~~~~f~~~d~~-~~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLFDKD-GDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHHCCC-CCCcEeHHHHHHHHH
Confidence 44566666666 666666666666554
No 106
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=95.33 E-value=0.099 Score=50.47 Aligned_cols=142 Identities=15% Similarity=0.169 Sum_probs=84.3
Q ss_pred HHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHh-hhhcHHHHHHH---HHHHcCC--CCCceeHHhHHHHhhhhhhh--
Q 048599 101 ITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELA-VDRLSYTTQKQ---IELSDRD--GDGEISFYEYLPQFSKQDIE-- 172 (354)
Q Consensus 101 ~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~-~~~~~~~~~~~---~~~~D~~--~dG~I~~~EF~~~~~~~~~~-- 172 (354)
....|..+|...|.| +||.+|-.||..+=.... .+....++..+ .+..-.+ .+..++..-|+.+.......
T Consensus 193 ~v~al~RIFki~D~d-~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lfiergr 271 (625)
T KOG1707|consen 193 CVKALKRIFKISDSD-NDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLFIERGR 271 (625)
T ss_pred HHHHHHHHHhhhccc-cccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHhcc
Confidence 345699999999999 999999999987544332 22223333333 2222222 13344555555432221100
Q ss_pred ----------------------------------hcccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHh
Q 048599 173 ----------------------------------KNGMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAI 218 (354)
Q Consensus 173 ----------------------------------~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~ 218 (354)
.-.++..-...+..+|..+|.|+||.++..|+..++....... .
T Consensus 272 ~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~p--W 349 (625)
T KOG1707|consen 272 HETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPGSP--W 349 (625)
T ss_pred ccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCC--C
Confidence 0234455566788999999999999999999999997654311 0
Q ss_pred hHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 219 QRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 219 ~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
... -.....-.+..|.+++.-|+..+.
T Consensus 350 ~~~---~~~~~t~~~~~G~ltl~g~l~~Ws 376 (625)
T KOG1707|consen 350 TSS---PYKDSTVKNERGWLTLNGFLSQWS 376 (625)
T ss_pred CCC---cccccceecccceeehhhHHHHHH
Confidence 000 000001122578899999987653
No 107
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=94.74 E-value=0.02 Score=50.78 Aligned_cols=61 Identities=30% Similarity=0.342 Sum_probs=49.5
Q ss_pred hHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 268 SAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 268 ~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
.+.--|..+|+|+++.|...|++.+=+-+. ...-...-...++...|.|+|.+||++|+..
T Consensus 334 vv~w~F~qLdkN~nn~i~rrEwKpFK~~l~--k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~ 394 (421)
T KOG4578|consen 334 VVHWYFNQLDKNSNNDIERREWKPFKRVLL--KKSKPRKCSRKFFKYCDLNKDKKISLDEWRG 394 (421)
T ss_pred eeeeeeeeecccccCccchhhcchHHHHHH--hhccHHHHhhhcchhcccCCCceecHHHHhh
Confidence 466679999999999999999988544332 2223456678899999999999999999988
No 108
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=94.69 E-value=0.25 Score=40.20 Aligned_cols=103 Identities=13% Similarity=0.109 Sum_probs=72.5
Q ss_pred HHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhh-----------------------------------------------
Q 048599 105 LIYLFPLIDNEPKDGVLSLNELDNWNVELAVDR----------------------------------------------- 137 (354)
Q Consensus 105 l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~----------------------------------------------- 137 (354)
|++-..-+|+| +||.|.+-|-..-++.+|...
T Consensus 9 LQqHvaFFDrd-~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~Y 87 (174)
T PF05042_consen 9 LQQHVAFFDRD-KDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGAY 87 (174)
T ss_pred HhhhhceeCCC-CCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCcccc
Confidence 66777789999 999999999877777666542
Q ss_pred ------cHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhc-ccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhC
Q 048599 138 ------LSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKN-GMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLH 209 (354)
Q Consensus 138 ------~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~-~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~ 209 (354)
.+...+++|..+++.+.+.+++.|...++........ .--.....+|...|... .+.+|.+.++.++.+..
T Consensus 88 D~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~vYD 165 (174)
T PF05042_consen 88 DTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRGVYD 165 (174)
T ss_pred ccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhhhcc
Confidence 2356778889999888899999999998877432210 00001123344555554 67789999999988763
No 109
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=94.57 E-value=0.063 Score=48.11 Aligned_cols=101 Identities=17% Similarity=0.094 Sum_probs=73.5
Q ss_pred hHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhcccccCCC
Q 048599 182 GWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFEDDG 261 (354)
Q Consensus 182 ~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~ 261 (354)
..|+..|+.+-.+.++......+...-.......+..-...+..||..+|.|.||.++..|....-..
T Consensus 211 ~RL~dWF~~lhe~s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ld------------ 278 (434)
T KOG3555|consen 211 NRLRDWFKALHEDSSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNYDLLLDQSELRAIELD------------ 278 (434)
T ss_pred HHHHHHHHHHHhhhhccCcchhhcccccccccccCcchhhhhhhhhhccccccccccCHHHhhhhhcc------------
Confidence 45677888887777777776666655333222122344557888999999999999999998664331
Q ss_pred CCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhh
Q 048599 262 DGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYL 296 (354)
Q Consensus 262 ~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~ 296 (354)
..+.-++..|...|..+||.||-.|.-..+.+-
T Consensus 279 --knE~CikpFfnsCD~~kDg~iS~~EWC~CF~k~ 311 (434)
T KOG3555|consen 279 --KNEACIKPFFNSCDTYKDGSISTNEWCYCFQKS 311 (434)
T ss_pred --CchhHHHHHHhhhcccccCccccchhhhhhccC
Confidence 266778889999999999999999987766544
No 110
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=94.41 E-value=0.061 Score=38.55 Aligned_cols=64 Identities=22% Similarity=0.402 Sum_probs=50.1
Q ss_pred HHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCC----CCCCeeHHHHHHHHHH
Q 048599 184 WKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDD----NDGKLNLDEFLENTYR 249 (354)
Q Consensus 184 l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d----~dg~I~~~eF~~~~~~ 249 (354)
+..+|..+-. +.+.||.++|..+|....+. +..+...+..++..+.++ ..+.+++++|..++..
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~-~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S 69 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQGE-PRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS 69 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTSS--TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHhcc-ccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence 5678999955 89999999999999755331 234677888888887654 4789999999998874
No 111
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.12 E-value=0.043 Score=56.67 Aligned_cols=143 Identities=20% Similarity=0.182 Sum_probs=110.1
Q ss_pred HHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhh-------
Q 048599 101 ITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEK------- 173 (354)
Q Consensus 101 ~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~------- 173 (354)
...++..+|..+... +|.++..-.+.+|.... +....+.++|...|.+.+|.++..||...+.......
T Consensus 127 e~aky~q~f~s~~p~--~g~~sg~~~~pil~~s~--Lp~~~l~~iw~l~d~d~~g~Ld~~ef~~am~l~~~~l~~~~~p~ 202 (847)
T KOG0998|consen 127 EQAKYDQIFRSLSPS--NGLLSGDKAKPILLNSK--LPSDVLGRIWELSDIDKDGNLDRDEFAVAMHLINDLLNGNSEPV 202 (847)
T ss_pred HHHHHHHHHhccCCC--CCccccchhhhhhhcCC--CChhhhccccccccccccCCCChhhhhhhhhHHHHHhhcccCCC
Confidence 345677788888876 89999999988875544 3446777899999999999999999987766432110
Q ss_pred -------------------c-----------------------------------------------------ccccchH
Q 048599 174 -------------------N-----------------------------------------------------GMVHGQA 181 (354)
Q Consensus 174 -------------------~-----------------------------------------------------~~~~~~~ 181 (354)
. .......
T Consensus 203 P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~~s~~~~vsp~d~ 282 (847)
T KOG0998|consen 203 PSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASPTTLSSLVDLSALNSNPSLSSLSLASSMQLIVSWSPKVSPSDK 282 (847)
T ss_pred CccCCcccCCcchhcccccCcccccccccccccccccccccccccchhcccCCccccccccccccccccccCcccChHHH
Confidence 0 2233344
Q ss_pred hHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhh
Q 048599 182 GWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYK 252 (354)
Q Consensus 182 ~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~ 252 (354)
..+..+|...|.+.+|.|+..+....+.+.|. ....+..++...|..+.|.|++.+|.-.+..+..
T Consensus 283 ~~~~~if~q~d~~~dG~I~s~~~~~~f~~~gl-----~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~~~ 348 (847)
T KOG0998|consen 283 QKYSKIFSQVDKDNDGSISSNEARNIFLPFGL-----SKPRLAHVWLLADTQNTGTLSKDEFALAMHLLEQ 348 (847)
T ss_pred HHHHHHHHhccccCCCcccccccccccccCCC-----ChhhhhhhhhhcchhccCcccccccchhhhhhhh
Confidence 56677899999999999999999999988663 4456888999999999999999998776654443
No 112
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=94.07 E-value=0.23 Score=40.47 Aligned_cols=145 Identities=14% Similarity=0.026 Sum_probs=84.5
Q ss_pred HHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhc---CCCCCCeeHHHHHHHHHHHhhhcc--cc
Q 048599 183 WWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMD---DDNDGKLNLDEFLENTYRTYKSYA--EF 257 (354)
Q Consensus 183 ~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D---~d~dg~I~~~eF~~~~~~~~~~~~--~~ 257 (354)
.|++.-.-+|+|+||.|..-|-.+-++.+|.. ...+ .+..++-... ....+.+.-.-| ......+.+.. ..
T Consensus 8 ~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~-~~~s--~~aa~~I~~~lSy~T~~~w~p~P~f-~Iyi~nIhk~kHGSD 83 (174)
T PF05042_consen 8 VLQQHVAFFDRDKDGIIYPWDTYQGFRALGFG-ILLS--LLAAFIIHGALSYPTQPSWIPDPFF-RIYIKNIHKGKHGSD 83 (174)
T ss_pred HHhhhhceeCCCCCeeECHHHHHHHHHHhCCC-HHHH--HHHHHHHHcccCCccCCCCCCCCce-eEEeecccccccCCC
Confidence 46777778999999999999999999988863 1111 1111111111 011111111001 11111100000 00
Q ss_pred cC---CCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhC----CCCCCcHHHHHHHHHHHhccCCCCCccHHHHHh
Q 048599 258 ED---DGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLH----PGEISYAKYYSRHLIHEADDNRDGNLTLDEMLN 330 (354)
Q Consensus 258 ~~---~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~----~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~ 330 (354)
.. .+-.-..++..++|..+++.+.+.||..|+..+++.-. |-...-+.-|...++..+ .+.||.++.+....
T Consensus 84 Sg~YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~ 162 (174)
T PF05042_consen 84 SGAYDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRG 162 (174)
T ss_pred ccccccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhh
Confidence 00 01112357789999999998899999999999998521 111334556666777666 78899999999877
Q ss_pred cH
Q 048599 331 HE 332 (354)
Q Consensus 331 ~~ 332 (354)
.|
T Consensus 163 vY 164 (174)
T PF05042_consen 163 VY 164 (174)
T ss_pred hc
Confidence 44
No 113
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.69 E-value=0.1 Score=49.02 Aligned_cols=66 Identities=18% Similarity=0.185 Sum_probs=56.0
Q ss_pred hhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhhhhc
Q 048599 267 PSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYIFYN 337 (354)
Q Consensus 267 ~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~f~~ 337 (354)
+-....|+.+-.|-.|+|+-.--+.++.+- .+.-.++.+|++..|.+.||.|++.||+.+|-..+.
T Consensus 231 eYYvnQFrtvQpDp~gfisGsaAknFFtKS-----klpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVVa 296 (737)
T KOG1955|consen 231 EYYVNQFRTVQPDPHGFISGSAAKNFFTKS-----KLPIEELSHIWELSDVDRDGALTLSEFCAAFHLVVA 296 (737)
T ss_pred HHHHhhhhcccCCcccccccHHHHhhhhhc-----cCchHHHHHHHhhcccCccccccHHHHHhhHhheee
Confidence 334567888889999999999999888764 377889999999999999999999999998876543
No 114
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.37 E-value=0.15 Score=47.92 Aligned_cols=68 Identities=25% Similarity=0.282 Sum_probs=57.3
Q ss_pred ccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHH
Q 048599 177 VHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYR 249 (354)
Q Consensus 177 ~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~ 249 (354)
+.++.+.+...|+-+-.|-+|+|+..--+.++.+.. +.-.++..+|...|.+.||-+++.||+..+..
T Consensus 226 T~EQReYYvnQFrtvQpDp~gfisGsaAknFFtKSk-----lpi~ELshIWeLsD~d~DGALtL~EFcAAfHL 293 (737)
T KOG1955|consen 226 TPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTKSK-----LPIEELSHIWELSDVDRDGALTLSEFCAAFHL 293 (737)
T ss_pred CHHHHHHHHhhhhcccCCcccccccHHHHhhhhhcc-----CchHHHHHHHhhcccCccccccHHHHHhhHhh
Confidence 445667788899999999999999999999987654 34457889999999999999999999987643
No 115
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=92.69 E-value=0.19 Score=44.44 Aligned_cols=66 Identities=27% Similarity=0.445 Sum_probs=47.3
Q ss_pred hHHHHHHhhcCCCCCCcCHHHHHHHHHh-----hCCCCCC--cHHHH------HHHHHHHhccCCCCCccHHHHHhcHh
Q 048599 268 SAEETFVELDTNKDKLLEVEELKPIFSY-----LHPGEIS--YAKYY------SRHLIHEADDNRDGNLTLDEMLNHEY 333 (354)
Q Consensus 268 ~~~~~F~~~D~d~dG~Is~~El~~~l~~-----~~~~~~~--~~~~~------~~~l~~~~D~~~dG~Is~~EF~~~~~ 333 (354)
.-+..|...|.|+||+++..||..++.. +.|.+.. +.+-+ -++++...|+|.|.-||++||++.-.
T Consensus 245 dPKTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~ 323 (442)
T KOG3866|consen 245 DPKTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTD 323 (442)
T ss_pred CcchheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhh
Confidence 3456788999999999999999887762 2222211 11100 34578899999999999999998543
No 116
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=92.58 E-value=0.18 Score=45.33 Aligned_cols=54 Identities=15% Similarity=0.202 Sum_probs=29.3
Q ss_pred HHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHH
Q 048599 187 QFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENT 247 (354)
Q Consensus 187 ~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~ 247 (354)
+|..+|.|.+|.|+..|++.+-..-. +.-++.+|...|...||+|+-.||...+
T Consensus 255 MFnklD~N~Dl~Ld~sEl~~I~ldkn-------E~CikpFfnsCD~~kDg~iS~~EWC~CF 308 (434)
T KOG3555|consen 255 MFNKLDTNYDLLLDQSELRAIELDKN-------EACIKPFFNSCDTYKDGSISTNEWCYCF 308 (434)
T ss_pred hhhccccccccccCHHHhhhhhccCc-------hhHHHHHHhhhcccccCccccchhhhhh
Confidence 56666666666666666655543221 1234455666666566666666665544
No 117
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=92.29 E-value=1.3 Score=45.29 Aligned_cols=134 Identities=14% Similarity=0.095 Sum_probs=90.4
Q ss_pred cHHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcH-----HHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhc
Q 048599 100 NITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLS-----YTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKN 174 (354)
Q Consensus 100 ~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~-----~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~ 174 (354)
.+-.+|+.+|..+|.. ..|.++.+++..+|..+|..... .+..+++...|.+.-|.|++.+|...+......
T Consensus 744 ~v~~ElrAle~~~~~~-d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~-- 820 (890)
T KOG0035|consen 744 YVLDELRALENEQDKI-DGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYED-- 820 (890)
T ss_pred HHHHHHHHHHhHHHHh-hcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhh--
Confidence 3556799999999999 88999999999999999876543 233344566677778999999999998874322
Q ss_pred ccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCC--CCCeeHHHHHHHH
Q 048599 175 GMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDN--DGKLNLDEFLENT 247 (354)
Q Consensus 175 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~--dg~I~~~eF~~~~ 247 (354)
......+...|+.+-+++. +|..+||..- . +....+.+..-+...+.++ -|.|++..|...+
T Consensus 821 ---l~~~~r~i~s~~d~~ktk~-~lL~eEL~~~---~----d~lv~d~~~~e~~~~~~~~~~~r~Ld~~~~s~~~ 884 (890)
T KOG0035|consen 821 ---LDTELRAILAFEDWAKTKA-YLLLEELVRE---R----DELVRDLDIQEMAAYDEDERLPRGLDQVKFSSSL 884 (890)
T ss_pred ---hcHHHHHHHHHHHHHcchh-HHHHHHHHhh---c----cHhhHHHHHHhhcccccCCcccccchHHHHHHHh
Confidence 1233455667877766655 7888888871 1 3344433333333344332 2447777776544
No 118
>PLN02952 phosphoinositide phospholipase C
Probab=91.97 E-value=1.2 Score=44.23 Aligned_cols=91 Identities=13% Similarity=0.249 Sum_probs=61.6
Q ss_pred CCCCeeHHHHHHHHHHHhhhcccccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHH
Q 048599 234 NDGKLNLDEFLENTYRTYKSYAEFEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIH 313 (354)
Q Consensus 234 ~dg~I~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~ 313 (354)
+.|.++|.+|..+... .+.. .......+..+|..+-. +.+.++.++|..+|.... ++...+.+.+..|+.
T Consensus 13 ~~g~l~f~~f~~f~~~-~k~~-------~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q-~e~~~~~~~~~~i~~ 82 (599)
T PLN02952 13 DSGSYNYKMFNLFNRK-FKIT-------EAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQ-DELDCTLAEAQRIVE 82 (599)
T ss_pred cCCCcCHHHHHHHHHH-hccc-------cCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhC-CCcCCCHHHHHHHHH
Confidence 4589999999765443 2200 11256789999999954 447899999999999875 333456667777765
Q ss_pred Hhc-------cCCCCCccHHHHHhcHhhhhcc
Q 048599 314 EAD-------DNRDGNLTLDEMLNHEYIFYNT 338 (354)
Q Consensus 314 ~~D-------~~~dG~Is~~EF~~~~~~f~~~ 338 (354)
.+- ..+.+.++++.|.. |+.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~F~~----~l~s 110 (599)
T PLN02952 83 EVINRRHHVTRYTRHGLNLDDFFH----FLLY 110 (599)
T ss_pred HHHhhccccccccccCcCHHHHHH----HHcC
Confidence 431 11235699999999 7654
No 119
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=91.36 E-value=0.75 Score=47.04 Aligned_cols=105 Identities=17% Similarity=0.101 Sum_probs=79.1
Q ss_pred ccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCCh--HhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhc
Q 048599 177 VHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNT--AIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSY 254 (354)
Q Consensus 177 ~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~--~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~ 254 (354)
.......++..|+.+++...|.++.+++..+|-..|.... .....++..++...|.+.-|.+++.+|...+.+.....
T Consensus 742 sQ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~l 821 (890)
T KOG0035|consen 742 SQYVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYEDL 821 (890)
T ss_pred hHHHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhhh
Confidence 4455678899999999999999999999999988876322 22234566677777887789999999999887655422
Q ss_pred ccccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHH
Q 048599 255 AEFEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKP 291 (354)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~ 291 (354)
.....+..+|+.+-+++. +|..+||..
T Consensus 822 ---------~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 822 ---------DTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred ---------cHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 145566777877755555 788888877
No 120
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=90.80 E-value=0.11 Score=46.31 Aligned_cols=60 Identities=23% Similarity=0.219 Sum_probs=47.0
Q ss_pred HHHHhHhcCCCCCcccHHHHHH---hhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHH
Q 048599 185 KEQFDNADVDSNGTLNFDEFYN---FLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYR 249 (354)
Q Consensus 185 ~~~F~~~D~d~~G~Is~~E~~~---~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~ 249 (354)
.-.|..+|+|.++.|.+.|++. ++.... -...-...++...|.|+|-+|++.|+...+..
T Consensus 336 ~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s-----~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 336 HWYFNQLDKNSNNDIERREWKPFKRVLLKKS-----KPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred eeeeeeecccccCccchhhcchHHHHHHhhc-----cHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 3379999999999999998654 444332 12335678999999999999999999987753
No 121
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=90.49 E-value=0.48 Score=49.95 Aligned_cols=58 Identities=12% Similarity=0.267 Sum_probs=50.8
Q ss_pred HHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcH
Q 048599 271 ETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHE 332 (354)
Q Consensus 271 ~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~ 332 (354)
..|+.+|.||.|.||..+|.+++..- ..++..+++.++.-+..|.+..++|++|+..+
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~----k~ytqse~dfllscae~dend~~~y~dfv~rf 4118 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGH----KHYTQSEIDFLLSCAEADENDMFDYEDFVDRF 4118 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhcc----ccchhHHHHHHHHhhccCccccccHHHHHHHh
Confidence 35888999999999999999987654 56889999999999989999999999999943
No 122
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=89.82 E-value=0.49 Score=41.94 Aligned_cols=62 Identities=19% Similarity=0.263 Sum_probs=44.9
Q ss_pred HhchhhcCCCCCCCcCHHHHHHHHHHHhhhhc------------HHHH----HHHHHHHcCCCCCceeHHhHHHHhhhh
Q 048599 107 YLFPLIDNEPKDGVLSLNELDNWNVELAVDRL------------SYTT----QKQIELSDRDGDGEISFYEYLPQFSKQ 169 (354)
Q Consensus 107 ~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~------------~~~~----~~~~~~~D~~~dG~I~~~EF~~~~~~~ 169 (354)
..|...|.| +||+++..||..++..--.+.- ..+- ..+|+.+|.|.|..|+.+||+......
T Consensus 248 TFF~LHD~N-sDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~k 325 (442)
T KOG3866|consen 248 TFFALHDLN-SDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDNK 325 (442)
T ss_pred hheeeeccC-CcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhhc
Confidence 356778899 9999999999987764322210 0111 124789999999999999999876653
No 123
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=89.17 E-value=0.15 Score=42.16 Aligned_cols=59 Identities=29% Similarity=0.345 Sum_probs=47.3
Q ss_pred hchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhh
Q 048599 108 LFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSK 168 (354)
Q Consensus 108 ~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~ 168 (354)
-|-++|..|.||++|-.||.-+-.. ..++..=+.+.|...|.|+||.|+.+|+...+..
T Consensus 192 qf~qld~~p~d~~~sh~el~pl~ap--~ipme~c~~~f~e~cd~~nd~~ial~ew~~c~gi 250 (259)
T KOG4004|consen 192 QFGQLDQHPIDGYLSHTELAPLRAP--LIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 250 (259)
T ss_pred eeccccCCCccccccccccccccCC--cccHHhhchhhhhcccCCCCCceeHHHhhcccCc
Confidence 4668899999999999999864322 2245667889999999999999999999876543
No 124
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=89.08 E-value=0.2 Score=34.40 Aligned_cols=57 Identities=16% Similarity=0.187 Sum_probs=40.6
Q ss_pred CchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCC-------CCCccHHHHHhcH
Q 048599 265 DFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNR-------DGNLTLDEMLNHE 332 (354)
Q Consensus 265 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~-------dG~Is~~EF~~~~ 332 (354)
..+.+..+|+.+ .++.++||..||++.|. +++++.+.+.+..-. -|.++|..|++.+
T Consensus 4 s~eqv~~aFr~l-A~~KpyVT~~dLr~~l~----------pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~l 67 (69)
T PF08726_consen 4 SAEQVEEAFRAL-AGGKPYVTEEDLRRSLT----------PEQAEYCISRMPPYEGPDGDAIPGAYDYESFTNSL 67 (69)
T ss_dssp TCHHHHHHHHHH-CTSSSCEEHHHHHHHS-----------CCCHHHHHCCSEC--SSS----TTEEECHHHHCCC
T ss_pred CHHHHHHHHHHH-HcCCCcccHHHHHHHcC----------cHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHHH
Confidence 567789999999 77889999999999642 223566666554433 2678998888743
No 125
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=87.36 E-value=0.85 Score=44.06 Aligned_cols=69 Identities=14% Similarity=0.151 Sum_probs=61.2
Q ss_pred HHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhh
Q 048599 103 SRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIE 172 (354)
Q Consensus 103 ~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~ 172 (354)
.+.+..|..+|.+ +.|+++.......|+..+.........++++..|.+.+|.++..||.+++.....+
T Consensus 593 ~~~~~rf~~lD~~-k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~g 661 (680)
T KOG0042|consen 593 LRRKTRFAFLDAD-KKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIKNG 661 (680)
T ss_pred HHHHHHHHhhcch-HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhcC
Confidence 4578899999999 99999999999999999877778888999999999999999999999988875433
No 126
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=87.17 E-value=0.43 Score=36.02 Aligned_cols=32 Identities=22% Similarity=0.164 Sum_probs=23.7
Q ss_pred CcHHHHHHHHHHHhccCCCCCccHHHHHhcHh
Q 048599 302 SYAKYYSRHLIHEADDNRDGNLTLDEMLNHEY 333 (354)
Q Consensus 302 ~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~ 333 (354)
.+++++++.|+..+-.|..|+|.|.||+..|.
T Consensus 3 iLtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs 34 (118)
T PF08976_consen 3 ILTDEQFDRLWNEMPVNAKGRLKYQEFLSKFS 34 (118)
T ss_dssp ---HHHHHHHHTTS-B-TTS-EEHHHHHHHT-
T ss_pred cccHHHhhhhhhhCcCCccCCEeHHHHHHHcc
Confidence 37899999999999999999999999999543
No 127
>PLN02952 phosphoinositide phospholipase C
Probab=86.97 E-value=2.7 Score=41.74 Aligned_cols=91 Identities=18% Similarity=0.161 Sum_probs=57.4
Q ss_pred CCCceeHHhHHHHhhhhhhhhcccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhh--
Q 048599 153 GDGEISFYEYLPQFSKQDIEKNGMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERM-- 230 (354)
Q Consensus 153 ~dG~I~~~EF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~-- 230 (354)
+.|.++|+||..+....... .......+..+|..+-. +.+.|+.++|..+|...... ...+...+..++..+
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~----~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q~e-~~~~~~~~~~i~~~~~~ 86 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKIT----EAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQDE-LDCTLAEAQRIVEEVIN 86 (599)
T ss_pred cCCCcCHHHHHHHHHHhccc----cCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhCCC-cCCCHHHHHHHHHHHHh
Confidence 45899999998766553211 11124568889998854 44789999999999765431 123333455554332
Q ss_pred --c---CCCCCCeeHHHHHHHHHH
Q 048599 231 --D---DDNDGKLNLDEFLENTYR 249 (354)
Q Consensus 231 --D---~d~dg~I~~~eF~~~~~~ 249 (354)
. ..+.+.++++.|..++..
T Consensus 87 ~~~~~~~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 87 RRHHVTRYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred hccccccccccCcCHHHHHHHHcC
Confidence 1 112345899999998863
No 128
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=86.68 E-value=1.5 Score=30.09 Aligned_cols=55 Identities=20% Similarity=0.278 Sum_probs=37.6
Q ss_pred HhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcC----C---CCCCeeHHHHHHH
Q 048599 181 AGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDD----D---NDGKLNLDEFLEN 246 (354)
Q Consensus 181 ~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~----d---~dg~I~~~eF~~~ 246 (354)
.+.+..+|+.+ .++.++||..+|++.|.+.. ++-+...+.. + ..|.++|..|+..
T Consensus 5 ~eqv~~aFr~l-A~~KpyVT~~dLr~~l~pe~----------aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~ 66 (69)
T PF08726_consen 5 AEQVEEAFRAL-AGGKPYVTEEDLRRSLTPEQ----------AEYCISRMPPYEGPDGDAIPGAYDYESFTNS 66 (69)
T ss_dssp CHHHHHHHHHH-CTSSSCEEHHHHHHHS-CCC----------HHHHHCCSEC--SSS----TTEEECHHHHCC
T ss_pred HHHHHHHHHHH-HcCCCcccHHHHHHHcCcHH----------HHHHHHHCcccCCCCcCCCCCCcCHHHHHHH
Confidence 35678899999 88899999999999987654 1223333322 1 2367999988754
No 129
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=86.16 E-value=2.3 Score=34.39 Aligned_cols=64 Identities=5% Similarity=0.078 Sum_probs=47.2
Q ss_pred HHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhh
Q 048599 271 ETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYI 334 (354)
Q Consensus 271 ~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~ 334 (354)
..|..|-..+...++..-|..+++..+.-...++..+++.+|..+-..+..+|+|++|+.++..
T Consensus 6 ~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~ 69 (154)
T PF05517_consen 6 KAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAE 69 (154)
T ss_dssp HHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHH
T ss_pred HHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHH
Confidence 3444444566678999999999998876555699999999999986666778999999996654
No 130
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=85.13 E-value=1.6 Score=42.81 Aligned_cols=58 Identities=16% Similarity=0.167 Sum_probs=49.4
Q ss_pred HHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccchHhHHHHHHhHhcCCCCCcccHHHH
Q 048599 140 YTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQAGWWKEQFDNADVDSNGTLNFDEF 204 (354)
Q Consensus 140 ~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~ 204 (354)
....++|...|.+++|.|+|.+++..+.....+ ...+.++-.|+.+|.+++ .++.++.
T Consensus 555 ~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~------~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 555 IFLERLFRLLDDSMTGLLTFKDLVSGLSILKAG------DALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHhcccCCcceeEHHHHHHHHHHHHhh------hHHHHHHHHHhhccCCcc-ccccccc
Confidence 456788999999999999999999998876544 345677889999999999 9999888
No 131
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=82.57 E-value=1.6 Score=42.31 Aligned_cols=72 Identities=21% Similarity=0.242 Sum_probs=60.6
Q ss_pred ccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHh
Q 048599 177 VHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTY 251 (354)
Q Consensus 177 ~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~ 251 (354)
+..+....+..|..+|.|+.|+++.....++|...+ ..+....+.++++..|.+.+|.+...||.+.+....
T Consensus 588 ~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~---~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~ 659 (680)
T KOG0042|consen 588 TPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSEN---VGWDEDRLHEELQEADENLNGFVELREFLQLMSAIK 659 (680)
T ss_pred CHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhc---CCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHh
Confidence 445566677899999999999999999999998776 346677788999999999999999999999776544
No 132
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=82.56 E-value=3.8 Score=33.15 Aligned_cols=64 Identities=9% Similarity=0.153 Sum_probs=46.1
Q ss_pred HHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHH
Q 048599 187 QFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRT 250 (354)
Q Consensus 187 ~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~ 250 (354)
.|..|-..+...++...|..+++..+.....++...+.-+|..+-..+..+|+|++|+.++...
T Consensus 7 ~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~l 70 (154)
T PF05517_consen 7 AFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAEL 70 (154)
T ss_dssp HHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHH
T ss_pred HHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence 3333445666789999999999887765555777789999999766666779999999987644
No 133
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=82.30 E-value=0.69 Score=38.32 Aligned_cols=65 Identities=25% Similarity=0.340 Sum_probs=48.8
Q ss_pred HHHHHhhcCC-CCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhhhhccccCCC
Q 048599 270 EETFVELDTN-KDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYIFYNTVYNDV 343 (354)
Q Consensus 270 ~~~F~~~D~d-~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~f~~~~~~~~ 343 (354)
...|-.+|.- .||++|-.||.++-.-+-|. +.-+...|...|.|+||.|+++|+-. -++-...++
T Consensus 190 ~wqf~qld~~p~d~~~sh~el~pl~ap~ipm-----e~c~~~f~e~cd~~nd~~ial~ew~~----c~gikq~di 255 (259)
T KOG4004|consen 190 HWQFGQLDQHPIDGYLSHTELAPLRAPLIPM-----EHCTTRFFETCDLDNDKYIALDEWAG----CFGIKQKDI 255 (259)
T ss_pred eeeeccccCCCccccccccccccccCCcccH-----HhhchhhhhcccCCCCCceeHHHhhc----ccCcchhcc
Confidence 3457777765 69999999998864444222 33467889999999999999999988 666666555
No 134
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=80.78 E-value=2.6 Score=44.86 Aligned_cols=58 Identities=14% Similarity=0.277 Sum_probs=48.6
Q ss_pred HHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 187 QFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 187 ~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
.|+.||+||.|.|+..+|..++.... .-+..+++-++.-...|.+..++|.+|+.-+.
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~~k----~ytqse~dfllscae~dend~~~y~dfv~rfh 4119 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEGHK----HYTQSEIDFLLSCAEADENDMFDYEDFVDRFH 4119 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhccc----cchhHHHHHHHHhhccCccccccHHHHHHHhc
Confidence 68899999999999999999997543 34555778888888889999999999998664
No 135
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=80.74 E-value=3.6 Score=40.49 Aligned_cols=61 Identities=18% Similarity=0.250 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhcccccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHH
Q 048599 218 IQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFEDDGDGTDFPSAEETFVELDTNKDKLLEVEEL 289 (354)
Q Consensus 218 ~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El 289 (354)
.+...+.++|...|.+++|.|+|.+++..+..... +...+.+.-+|+.+|.+++ ....+|.
T Consensus 552 ~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~----------~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 552 VSLIFLERLFRLLDDSMTGLLTFKDLVSGLSILKA----------GDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHHHHhcccCCcceeEHHHHHHHHHHHHh----------hhHHHHHHHHHhhccCCcc-ccccccc
Confidence 44556788999999999999999999998876553 1256778889999999999 9988887
No 136
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=77.02 E-value=1.2 Score=38.86 Aligned_cols=22 Identities=9% Similarity=0.299 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCC
Q 048599 8 ALLTTAFVLFFVFSPIQPHDHN 29 (354)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~ 29 (354)
=+|++||+++|++..+.|+-..
T Consensus 194 DiW~cGViLfiLL~G~~PF~~~ 215 (355)
T KOG0033|consen 194 DIWACGVILYILLVGYPPFWDE 215 (355)
T ss_pred hhhhhhHHHHHHHhCCCCCCCc
Confidence 4799999999999999998774
No 137
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=76.21 E-value=16 Score=26.58 Aligned_cols=66 Identities=11% Similarity=0.209 Sum_probs=42.0
Q ss_pred hhHHHHHHhhcCCCCCCcCHHHHHHHHHhh-------CCCC-CCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhhhhcc
Q 048599 267 PSAEETFVELDTNKDKLLEVEELKPIFSYL-------HPGE-ISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYIFYNT 338 (354)
Q Consensus 267 ~~~~~~F~~~D~d~dG~Is~~El~~~l~~~-------~~~~-~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~f~~~ 338 (354)
++.+.+|+.+ .|++|.++..-|..+|..+ +.+. ....+..+...|... .....|+.++|++ |+.+
T Consensus 3 dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~----wl~~ 75 (90)
T PF09069_consen 3 DKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLD----WLMS 75 (90)
T ss_dssp HHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHH----HHHT
T ss_pred HHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHH----HHHh
Confidence 4678899999 7889999999999888832 2111 223566677888776 4677899999999 7765
Q ss_pred c
Q 048599 339 V 339 (354)
Q Consensus 339 ~ 339 (354)
.
T Consensus 76 e 76 (90)
T PF09069_consen 76 E 76 (90)
T ss_dssp -
T ss_pred C
Confidence 5
No 138
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=74.84 E-value=23 Score=25.73 Aligned_cols=63 Identities=14% Similarity=0.222 Sum_probs=40.7
Q ss_pred HHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhh-----------cHHHHHHHHHHHcCCCCCceeHHhHHHHhhh
Q 048599 102 TSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDR-----------LSYTTQKQIELSDRDGDGEISFYEYLPQFSK 168 (354)
Q Consensus 102 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~-----------~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~ 168 (354)
.++++-+|+++ .| ++|.++..-|..+|+....-+ ....++.-|... ..+..|+.++|+.++..
T Consensus 2 ~dKyRylFsli-sd-~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 2 EDKYRYLFSLI-SD-SNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHHHH-S--TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHHHT
T ss_pred hHHHHHHHHHH-cC-CCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHHHh
Confidence 35688999999 55 699999999999887643321 234455556554 35678999999998876
No 139
>PF15144 DUF4576: Domain of unknown function (DUF4576)
Probab=73.83 E-value=5.8 Score=27.47 Aligned_cols=23 Identities=9% Similarity=0.163 Sum_probs=20.5
Q ss_pred CchHHHHHHHHHHHHHHHHhcCC
Q 048599 1 MSKAVAYALLTTAFVLFFVFSPI 23 (354)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ 23 (354)
||-+++-+.++++++++|+.|.+
T Consensus 1 MAvSvLrltivlGLlvLIltC~A 23 (88)
T PF15144_consen 1 MAVSVLRLTIVLGLLVLILTCHA 23 (88)
T ss_pred CchHHHHHHHHHHHHHHHhhhcc
Confidence 78888899999999999999973
No 140
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=72.89 E-value=45 Score=34.56 Aligned_cols=71 Identities=18% Similarity=0.228 Sum_probs=57.0
Q ss_pred CchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCC-------CCCcHHHHHHHHHHHhccCC----CCCccHHHHHhcHh
Q 048599 265 DFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPG-------EISYAKYYSRHLIHEADDNR----DGNLTLDEMLNHEY 333 (354)
Q Consensus 265 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~-------~~~~~~~~~~~l~~~~D~~~----dG~Is~~EF~~~~~ 333 (354)
....+..+|..+-.++.-++|.++|..+|+.-.-. -..+....+..|+..+-.|. .|++|-+-|+.
T Consensus 219 pR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~r--- 295 (1189)
T KOG1265|consen 219 PRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVR--- 295 (1189)
T ss_pred CchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHH---
Confidence 56789999999988888899999999999843100 03466788999999987774 68999999999
Q ss_pred hhhccc
Q 048599 334 IFYNTV 339 (354)
Q Consensus 334 ~f~~~~ 339 (354)
|..+.
T Consensus 296 -yl~gd 300 (1189)
T KOG1265|consen 296 -YLMGD 300 (1189)
T ss_pred -HhhCC
Confidence 87763
No 141
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=69.82 E-value=26 Score=25.83 Aligned_cols=83 Identities=13% Similarity=0.050 Sum_probs=50.8
Q ss_pred CCCCcCHHHHHHHHHHHhh--hhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccchHhHHHHHHhHhcCC
Q 048599 117 KDGVLSLNELDNWNVELAV--DRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQAGWWKEQFDNADVD 194 (354)
Q Consensus 117 ~dG~Is~~El~~~l~~~~~--~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d 194 (354)
-||.++..|...+-..+.. ..+..+..+++..+........++.+|...+..... ......-+...|...-
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~r~~~l~~L~~vA~-- 84 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKEHFD-----YEERLELVEALWEVAY-- 84 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCC-----HHHHHHHHHHHHHHHH--
Confidence 3899999998865544332 334566677777776666667788888887665321 1122233444666553
Q ss_pred CCCcccHHHHHH
Q 048599 195 SNGTLNFDEFYN 206 (354)
Q Consensus 195 ~~G~Is~~E~~~ 206 (354)
-||.++..|-.-
T Consensus 85 ADG~~~~~E~~~ 96 (104)
T cd07313 85 ADGELDEYEEHL 96 (104)
T ss_pred hcCCCCHHHHHH
Confidence 356777777553
No 142
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=68.21 E-value=8.1 Score=19.72 Aligned_cols=16 Identities=25% Similarity=0.331 Sum_probs=10.6
Q ss_pred cCCCCCCcCHHHHHHH
Q 048599 277 DTNKDKLLEVEELKPI 292 (354)
Q Consensus 277 D~d~dG~Is~~El~~~ 292 (354)
|.|+||.|+.-++..+
T Consensus 1 DvN~DG~vna~D~~~l 16 (21)
T PF00404_consen 1 DVNGDGKVNAIDLALL 16 (21)
T ss_dssp -TTSSSSSSHHHHHHH
T ss_pred CCCCCCcCCHHHHHHH
Confidence 5677888877776544
No 143
>PF07406 NICE-3: NICE-3 protein; InterPro: IPR010876 This family consists of several eukaryotic NICE-3 and related proteins. The gene coding for NICE-3 is part of the epidermal differentiation complex (EDC), which comprises a large number of genes that are of crucial importance for the maturation of the human epidermis []. The function of NICE-3 is unknown.
Probab=66.06 E-value=37 Score=28.42 Aligned_cols=62 Identities=13% Similarity=0.136 Sum_probs=33.5
Q ss_pred HHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhc------HHHHHHHHHHH-----cCCCCCceeHHhHHHHhh
Q 048599 104 RLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRL------SYTTQKQIELS-----DRDGDGEISFYEYLPQFS 167 (354)
Q Consensus 104 ~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~------~~~~~~~~~~~-----D~~~dG~I~~~EF~~~~~ 167 (354)
.+..-|..+|.. -..+.-+.+..||..+..... ...++.+...+ +.+.=|...|.+|...+.
T Consensus 109 ~~e~~l~~~~~~--~~r~~G~~~R~~L~~Lr~~~~p~k~~~~~Li~~l~D~Ye~AR~g~~~FGe~Ey~ky~~~l~ 181 (186)
T PF07406_consen 109 ELEIPLHKLDRS--LARLPGENFRSYLLDLRNSSTPLKGSRSALIDQLLDGYEHARHGPGPFGEAEYLKYQELLT 181 (186)
T ss_pred HHhhHHHhhCCC--ccccccccHHHHHHHHHhccCCccCccHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Confidence 344555556655 467778889998855543222 23455554433 444445555555555443
No 144
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=66.06 E-value=6.4 Score=28.95 Aligned_cols=18 Identities=33% Similarity=0.194 Sum_probs=9.0
Q ss_pred chHHHHHHHHHHHHHHHH
Q 048599 2 SKAVAYALLTTAFVLFFV 19 (354)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~ 19 (354)
+|+++++.+++|++|||.
T Consensus 3 SK~~llL~l~LA~lLlis 20 (95)
T PF07172_consen 3 SKAFLLLGLLLAALLLIS 20 (95)
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 466555555555444443
No 145
>PLN02222 phosphoinositide phospholipase C 2
Probab=63.06 E-value=36 Score=33.93 Aligned_cols=69 Identities=12% Similarity=0.180 Sum_probs=52.7
Q ss_pred CchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhcc-CCCCCccHHHHHhcHhhhhcccc
Q 048599 265 DFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADD-NRDGNLTLDEMLNHEYIFYNTVY 340 (354)
Q Consensus 265 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~-~~dG~Is~~EF~~~~~~f~~~~~ 340 (354)
-...+..+|..+-. ++.++.++|..+|.... ++...+.+.+..|+..+.. -..+.++++.|.. |+.+..
T Consensus 23 ~~~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q-~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~----yL~s~~ 92 (581)
T PLN02222 23 APREIKTIFEKYSE--NGVMTVDHLHRFLIDVQ-KQDKATREDAQSIINSASSLLHRNGLHLDAFFK----YLFGDN 92 (581)
T ss_pred CcHHHHHHHHHhcC--CCCcCHHHHHHHHHHhc-CCccCCHHHHHHHHHhhhhhhhccCcCHHHHHH----HhcCCC
Confidence 34588999999843 47999999999999875 3334677788889887633 2467899999999 877653
No 146
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=60.48 E-value=8.3 Score=29.26 Aligned_cols=32 Identities=16% Similarity=0.280 Sum_probs=23.4
Q ss_pred hcHHHHHHHHHHHcCCCCCceeHHhHHHHhhh
Q 048599 137 RLSYTTQKQIELSDRDGDGEISFYEYLPQFSK 168 (354)
Q Consensus 137 ~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~ 168 (354)
+++++.+++|..+-.|..|.|.|.||+.-+..
T Consensus 4 LtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs~ 35 (118)
T PF08976_consen 4 LTDEQFDRLWNEMPVNAKGRLKYQEFLSKFSS 35 (118)
T ss_dssp --HHHHHHHHTTS-B-TTS-EEHHHHHHHT--
T ss_pred ccHHHhhhhhhhCcCCccCCEeHHHHHHHccc
Confidence 35688999999999999999999999998775
No 147
>PLN02230 phosphoinositide phospholipase C 4
Probab=59.37 E-value=50 Score=33.03 Aligned_cols=70 Identities=17% Similarity=0.197 Sum_probs=50.6
Q ss_pred CchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhcc-------CCCCCccHHHHHhcHhhhhc
Q 048599 265 DFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADD-------NRDGNLTLDEMLNHEYIFYN 337 (354)
Q Consensus 265 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~-------~~dG~Is~~EF~~~~~~f~~ 337 (354)
....+..+|..+-. +.+.++.++|..+|.....++...+.+.+..++..+-. -+.+.++++.|.. |+.
T Consensus 27 p~~ei~~lf~~~s~-~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~----yL~ 101 (598)
T PLN02230 27 PVADVRDLFEKYAD-GDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNY----YLF 101 (598)
T ss_pred CcHHHHHHHHHHhC-CCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHH----HHc
Confidence 56789999999953 34899999999999987533334566677777764421 1345699999999 776
Q ss_pred cc
Q 048599 338 TV 339 (354)
Q Consensus 338 ~~ 339 (354)
+.
T Consensus 102 s~ 103 (598)
T PLN02230 102 ST 103 (598)
T ss_pred Cc
Confidence 64
No 148
>PLN02228 Phosphoinositide phospholipase C
Probab=57.65 E-value=45 Score=33.13 Aligned_cols=69 Identities=16% Similarity=0.237 Sum_probs=52.0
Q ss_pred CchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccC----CCCCccHHHHHhcHhhhhcccc
Q 048599 265 DFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDN----RDGNLTLDEMLNHEYIFYNTVY 340 (354)
Q Consensus 265 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~----~dG~Is~~EF~~~~~~f~~~~~ 340 (354)
....+..+|..+-. ++.++.++|..+|.... ++...+.+.+..++..+... ..|.++.+.|.. |+.+..
T Consensus 22 ~~~ei~~if~~~s~--~~~~t~~~~~~FL~~~Q-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~----yl~s~~ 94 (567)
T PLN02228 22 PPVSIKRLFEAYSR--NGKMSFDELLRFVSEVQ-GERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYR----YLFSDT 94 (567)
T ss_pred CcHHHHHHHHHhcC--CCccCHHHHHHHHHHhc-CCccCCHHHHHHHHHHhccchhhcccCccCHHHHHH----HhcCcc
Confidence 56788999998843 36899999999998875 22334566788899887543 346799999999 776654
No 149
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=57.07 E-value=21 Score=24.54 Aligned_cols=51 Identities=8% Similarity=0.031 Sum_probs=35.2
Q ss_pred CCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhhhhc
Q 048599 281 DKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYIFYN 337 (354)
Q Consensus 281 dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~f~~ 337 (354)
+-.++..-|-.+|... ++......|...|+.=+.++|+.+||++.+...+|
T Consensus 6 sp~~~F~~L~~~l~~~------l~~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~IVG 56 (70)
T PF12174_consen 6 SPWMPFPMLFSALSKH------LPPSKMDLLQKHYEEFKKKKISREEFVRKLRQIVG 56 (70)
T ss_pred CCcccHHHHHHHHHHH------CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 3456666666666554 45666777777887778899999999995554443
No 150
>PF02532 PsbI: Photosystem II reaction centre I protein (PSII 4.8 kDa protein); InterPro: IPR003686 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbI, which is tightly associated with the D1/D2 heterodimer in PSII. The function of PsbI is unknown, but it may be involved in the assembly, dimerisation or stabilisation of PSII dimers [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_i 3ARC_I 3A0B_i 3BZ2_I 3PRQ_I 3KZI_I 3PRR_I 2AXT_i 4FBY_I 1S5L_i ....
Probab=56.98 E-value=25 Score=20.44 Aligned_cols=24 Identities=21% Similarity=0.243 Sum_probs=11.8
Q ss_pred hHHHHHHHHHHHHHHHHhc-CCCCC
Q 048599 3 KAVAYALLTTAFVLFFVFS-PIQPH 26 (354)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~~~ 26 (354)
|+++|++++.-+.++++=+ |..|.
T Consensus 5 K~~Vy~vV~ffv~LFifGflsnDp~ 29 (36)
T PF02532_consen 5 KIFVYTVVIFFVSLFIFGFLSNDPG 29 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred EEeehhhHHHHHHHHhccccCCCCC
Confidence 4566655554444444332 45554
No 151
>KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only]
Probab=56.75 E-value=63 Score=30.49 Aligned_cols=89 Identities=22% Similarity=0.282 Sum_probs=59.8
Q ss_pred CCCCcccHHHHHHhhCCCCCCC-hHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhcccccCCCCCCCchhHHHH
Q 048599 194 DSNGTLNFDEFYNFLHPEDSNN-TAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFEDDGDGTDFPSAEET 272 (354)
Q Consensus 194 d~~G~Is~~E~~~~l~~~~~~~-~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (354)
.|+...+..||..+..+..... ..+.-+.+..+-+.+|.|.+|.|+.+|=-.++..-++.-. ...+-.+.
T Consensus 40 agds~at~nefc~~~~~~c~s~~dklg~EAir~iHrqmDDD~nG~Id~~ESdeFlrEdmky~~---------~~~kr~~~ 110 (575)
T KOG4403|consen 40 AGDSRATRNEFCEVDAPECKSEQDKLGYEAIRDIHRQMDDDHNGSIDVEESDEFLREDMKYRD---------STRKRSEK 110 (575)
T ss_pred cCCchhhhccchhcCCchhhcccchhhHHHHHHHHHhcccccCCCcccccchHHHHHHhhccc---------chhhhhhh
Confidence 5666777888877776554322 4555667888999999999999999887666665444111 22223335
Q ss_pred HHhhcCCCCCCcCHHHHHHHHHh
Q 048599 273 FVELDTNKDKLLEVEELKPIFSY 295 (354)
Q Consensus 273 F~~~D~d~dG~Is~~El~~~l~~ 295 (354)
|.. .|..||.++|..+...
T Consensus 111 fH~----dD~~ItVedLWeaW~~ 129 (575)
T KOG4403|consen 111 FHG----DDKHITVEDLWEAWKE 129 (575)
T ss_pred ccC----CccceeHHHHHHHHHh
Confidence 543 4568999999887664
No 152
>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=52.78 E-value=17 Score=33.74 Aligned_cols=57 Identities=21% Similarity=0.128 Sum_probs=46.4
Q ss_pred HHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHH
Q 048599 105 LIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQ 165 (354)
Q Consensus 105 l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~ 165 (354)
..++|..+..- +|+||-..-+.++.. .+.....+-++|+..|.|+||.++-+||.-.
T Consensus 446 yde~fy~l~p~--~gk~sg~~ak~~mv~--sklpnsvlgkiwklad~d~dg~ld~eefala 502 (532)
T KOG1954|consen 446 YDEIFYTLSPV--NGKLSGRNAKKEMVK--SKLPNSVLGKIWKLADIDKDGMLDDEEFALA 502 (532)
T ss_pred hHhhhhccccc--CceeccchhHHHHHh--ccCchhHHHhhhhhhcCCcccCcCHHHHHHH
Confidence 55677777655 899999998888754 3455678899999999999999999999764
No 153
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=51.47 E-value=8.5 Score=34.73 Aligned_cols=24 Identities=8% Similarity=0.330 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCc
Q 048599 8 ALLTTAFVLFFVFSPIQPHDHNDR 31 (354)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~ 31 (354)
-+|+.+|++.|++|.|+|+...|.
T Consensus 245 dmwSlgVimYIlLCGyPPFYS~hg 268 (400)
T KOG0604|consen 245 DMWSLGVIMYILLCGYPPFYSNHG 268 (400)
T ss_pred CccchhHHHHHhhcCCCcccccCC
Confidence 369999999999999999977643
No 154
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]
Probab=45.83 E-value=2.6e+02 Score=28.80 Aligned_cols=131 Identities=10% Similarity=0.057 Sum_probs=80.5
Q ss_pred HHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhh-------------cHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhh
Q 048599 105 LIYLFPLIDNEPKDGVLSLNELDNWNVELAVDR-------------LSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDI 171 (354)
Q Consensus 105 l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~-------------~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~ 171 (354)
+.++|..++...++......+...+|...-... .+--+.-+++.||..++|.|..-+|...+.....
T Consensus 422 ~l~if~~h~l~~~~e~m~~~~~i~~L~~~y~~l~e~~g~~v~v~l~vD~~lN~llNvyD~~R~g~irvls~ki~~i~lck 501 (966)
T KOG4286|consen 422 ALDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHGNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKIGIISLCK 501 (966)
T ss_pred HHHHHHHhcccccCcCCCHHHHHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHhcccCCCcceEEeeehhhHHHHhc
Confidence 446777777663455666666665554322111 0122344579999999999999999887776653
Q ss_pred hhcccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhC-------------CCCCCChHhhHHHHHHHHHhhcCCCCCCe
Q 048599 172 EKNGMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLH-------------PEDSNNTAIQRWLLREKLERMDDDNDGKL 238 (354)
Q Consensus 172 ~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~-------------~~~~~~~~~~~~~~~~l~~~~D~d~dg~I 238 (354)
. ...+.++.+|+..-..++-.+ ...|..+|. ..|+.|.+.+ +...|. ..++--.|
T Consensus 502 ~------~leek~~ylF~~vA~~~sq~~-q~~l~lLL~dliqipr~lGE~aAfGgsNveps---vrsCF~--~v~~~pei 569 (966)
T KOG4286|consen 502 A------HLEDKYRYLFKQVASSTSQCD-QRRLGLLLHDLIQIPRQLGEVAAFGGSNIEPS---VRSCFQ--FVNNKPEI 569 (966)
T ss_pred c------hhHHHHHHHHHHHcCchhhHH-HHHHHHHHHHHHHHHHHHhHHHhhcCCCCChH---HHHHHH--hcCCCCcc
Confidence 2 123457789998866555444 555555542 2344444444 445555 34566679
Q ss_pred eHHHHHHHH
Q 048599 239 NLDEFLENT 247 (354)
Q Consensus 239 ~~~eF~~~~ 247 (354)
++..|+..+
T Consensus 570 ~~~~f~dw~ 578 (966)
T KOG4286|consen 570 EAALFLDWM 578 (966)
T ss_pred hHHHHHHHh
Confidence 999998765
No 155
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=44.86 E-value=19 Score=32.87 Aligned_cols=21 Identities=19% Similarity=0.398 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCC
Q 048599 9 LLTTAFVLFFVFSPIQPHDHN 29 (354)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~ 29 (354)
+|++|+++.|+++.|.|+.+.
T Consensus 274 lwSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 274 LWSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred HHHHHHHHHHHHhCCCCccCc
Confidence 799999999999999999764
No 156
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=44.43 E-value=24 Score=25.97 Aligned_cols=52 Identities=19% Similarity=0.100 Sum_probs=34.8
Q ss_pred CCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHh
Q 048599 281 DKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEY 333 (354)
Q Consensus 281 dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~ 333 (354)
||.++..|...+-..+. ....++..+...++..+........++.+|.+.+.
T Consensus 13 DG~v~~~E~~~i~~~l~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 64 (104)
T cd07313 13 DGEYDEEERAAIDRLLA-ERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIK 64 (104)
T ss_pred cCCCCHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 68888888766554332 11346777788888777666666677777777543
No 157
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=43.10 E-value=56 Score=18.34 Aligned_cols=17 Identities=18% Similarity=0.217 Sum_probs=8.6
Q ss_pred HHHHHHHHHHhcCCCCC
Q 048599 10 LTTAFVLFFVFSPIQPH 26 (354)
Q Consensus 10 ~~~~~~~~~~~~~~~~~ 26 (354)
.+++++++.++..-+|.
T Consensus 12 ~tlgiiFFAIfFRepPr 28 (31)
T PRK11875 12 LALVTLFFAIAFRDPPK 28 (31)
T ss_pred HHHHHHHHhhhccCCCC
Confidence 33445555555555554
No 158
>KOG3449 consensus 60S acidic ribosomal protein P2 [Translation, ribosomal structure and biogenesis]
Probab=42.46 E-value=1.5e+02 Score=22.38 Aligned_cols=64 Identities=9% Similarity=0.109 Sum_probs=49.4
Q ss_pred HHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcHhhhhccccC
Q 048599 270 EETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHEYIFYNTVYN 341 (354)
Q Consensus 270 ~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~~~f~~~~~~ 341 (354)
..+|-.++.-++-..+..+++.+|..+| .....+.++.++..+ .|+ +.+|.+..=..-+.++.+
T Consensus 4 vaAYLL~~lgGn~~psa~DikkIl~sVG---~E~d~e~i~~visel----~GK-~i~ElIA~G~eklAsvps 67 (112)
T KOG3449|consen 4 VAAYLLAVLGGNASPSASDIKKILESVG---AEIDDERINLVLSEL----KGK-DIEELIAAGREKLASVPS 67 (112)
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHhC---cccCHHHHHHHHHHh----cCC-CHHHHHHHhHHHHhcCCC
Confidence 3566667777888899999999999997 457788899999988 456 888888766555555554
No 159
>CHL00031 psbT photosystem II protein T
Probab=41.77 E-value=52 Score=18.79 Aligned_cols=19 Identities=21% Similarity=0.319 Sum_probs=10.6
Q ss_pred HHHHHHHHHHhcCCCCCCC
Q 048599 10 LTTAFVLFFVFSPIQPHDH 28 (354)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~ 28 (354)
.+++++++.++..-+|..+
T Consensus 12 ~tlgilFFAI~FRePPri~ 30 (33)
T CHL00031 12 STLGIIFFAIFFREPPKVP 30 (33)
T ss_pred HHHHHHHHhheecCCCCCC
Confidence 3445555666555666644
No 160
>CHL00020 psbN photosystem II protein N
Probab=41.05 E-value=42 Score=20.52 Aligned_cols=29 Identities=14% Similarity=0.188 Sum_probs=18.3
Q ss_pred CchHHHHHHHHHHHHHHHHhcC-CCCCCCC
Q 048599 1 MSKAVAYALLTTAFVLFFVFSP-IQPHDHN 29 (354)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 29 (354)
|.-+.++.+.+.++++.+--++ |..++++
T Consensus 1 me~A~~~~i~i~~ll~~~Tgy~iYtaFGpp 30 (43)
T CHL00020 1 METATLVAIFISGLLVSFTGYALYTAFGQP 30 (43)
T ss_pred CCchhhHHHHHHHHHHHhhheeeeeccCCc
Confidence 4455556666666666666665 7777666
No 161
>PRK02655 psbI photosystem II reaction center I protein I; Provisional
Probab=40.71 E-value=28 Score=20.38 Aligned_cols=24 Identities=21% Similarity=0.171 Sum_probs=11.2
Q ss_pred hHHHHHHHHHHHHHHHHhc-CCCCC
Q 048599 3 KAVAYALLTTAFVLFFVFS-PIQPH 26 (354)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~~~ 26 (354)
|+++|++++.-+.++++=+ +..|.
T Consensus 5 Ki~Vy~vV~ffvsLFiFGflsnDP~ 29 (38)
T PRK02655 5 KISVYIVVFFFVGLFVFGFLSSDPT 29 (38)
T ss_pred EeeehhhHHHHHHHHHcccCCCCCC
Confidence 5556655554444444322 34444
No 162
>CHL00024 psbI photosystem II protein I
Probab=39.87 E-value=31 Score=20.04 Aligned_cols=17 Identities=24% Similarity=0.399 Sum_probs=8.4
Q ss_pred hHHHHHHHHHHHHHHHH
Q 048599 3 KAVAYALLTTAFVLFFV 19 (354)
Q Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (354)
|+++|++++.-+.++++
T Consensus 5 Ki~Vy~vV~ffvsLFif 21 (36)
T CHL00024 5 KLFVYTVVIFFVSLFIF 21 (36)
T ss_pred EeeehhHHHHHHHHHHc
Confidence 45556555444444443
No 163
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=39.48 E-value=58 Score=24.05 Aligned_cols=57 Identities=19% Similarity=0.291 Sum_probs=36.9
Q ss_pred CchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHH----HhccCCCCCccHHHHHh
Q 048599 265 DFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIH----EADDNRDGNLTLDEMLN 330 (354)
Q Consensus 265 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~----~~D~~~dG~Is~~EF~~ 330 (354)
....+..-|..+-+ +|+|....|.+++.. . -+++-+.+||. .-... ...|+.+|...
T Consensus 28 ~W~~VE~RFd~La~--dG~L~rs~Fg~CIGM---~---dSkeFA~eLFdALaRrr~i~-~~~I~k~eL~e 88 (100)
T PF08414_consen 28 GWKEVEKRFDKLAK--DGLLPRSDFGECIGM---K---DSKEFAGELFDALARRRGIK-GDSITKDELKE 88 (100)
T ss_dssp -HHHHHHHHHHH-B--TTBEEGGGHHHHHT--------S-HHHHHHHHHHHHHHTT---SSEE-HHHHHH
T ss_pred CHHHHHHHHHHhCc--CCcccHHHHHHhcCC---c---ccHHHHHHHHHHHHHhcCCc-cCCcCHHHHHH
Confidence 35667888999866 899999999998642 2 34555555554 33333 57899999999
No 164
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=39.27 E-value=2.8 Score=39.26 Aligned_cols=67 Identities=13% Similarity=0.050 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCccc---ccCccccccCCCCCC------------chhhhhhhhhhhhhhcCCccccCC
Q 048599 8 ALLTTAFVLFFVFSPIQPHDHNDRLA---FIGRRFGYRYSVPTF------------DPLVLKMNRVTEEKKSGSIKTRTN 72 (354)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~r~~~~~~~~~~------------~~~~~~~~r~~~~~~~~~~~~~~~ 72 (354)
=+||+|+++++|++.+.|+......- .+=-+-+|...++.+ ..|+.+-++|.++.++..|+|+..
T Consensus 363 DiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~ 442 (475)
T KOG0615|consen 363 DIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKD 442 (475)
T ss_pred eeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence 37999999999999999976542100 000111222112222 234445566777777788888875
Q ss_pred CC
Q 048599 73 AN 74 (354)
Q Consensus 73 ~~ 74 (354)
+|
T Consensus 443 ~~ 444 (475)
T KOG0615|consen 443 AP 444 (475)
T ss_pred cc
Confidence 54
No 165
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=39.13 E-value=1.1e+02 Score=31.76 Aligned_cols=145 Identities=20% Similarity=0.254 Sum_probs=83.0
Q ss_pred HHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHH-HHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccc
Q 048599 101 ITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSY-TTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHG 179 (354)
Q Consensus 101 ~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~-~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~ 179 (354)
+..-++..+-.+|.+ .-..|+..+++..|.....+.+.. ...+-|.. |.-+++.++|..|..+............
T Consensus 142 I~~wlrk~~ysvd~~-~~~~isard~k~~l~qvn~k~~~~kfl~e~~te-d~~~k~dlsf~~f~~ly~~lmfs~~~a~-- 217 (1267)
T KOG1264|consen 142 IERWLRKQIYSVDQT-RENSISARDLKTILPQVNFKVSSAKFLKEKFTE-DGARKDDLSFEQFHLLYKKLMFSQQKAI-- 217 (1267)
T ss_pred HHHHHHhhheeccch-hhhheeHHhhhcccccceEEechHHHHHHHHhH-hhhccccccHHHHHHHHHHHhhccchhh--
Confidence 445577777788977 677899999999887776654422 22222322 3446788999999988776554321100
Q ss_pred hHhHHHHHHh--HhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCC-----CCCCeeHHHHHHHHHHH
Q 048599 180 QAGWWKEQFD--NADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDD-----NDGKLNLDEFLENTYRT 250 (354)
Q Consensus 180 ~~~~l~~~F~--~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d-----~dg~I~~~eF~~~~~~~ 250 (354)
.......|- .-+.-.--.++..||+++|.......-......+..++..+-.| ....+.+.||+.++...
T Consensus 218 -l~e~~~~~~~~~~~~~d~~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D~~re~~EPyl~v~EFv~fLFSr 294 (1267)
T KOG1264|consen 218 -LLEFKKDFILGNTDRPDASVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDDTMRETAEPYLFVDEFVTFLFSR 294 (1267)
T ss_pred -hhcccchhhhcCCCCccceEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhhhhhhccCcceeHHHHHHHHhhc
Confidence 001111121 11222235789999999996432210111112344455444322 34579999999988753
No 166
>PLN02223 phosphoinositide phospholipase C
Probab=39.11 E-value=1e+02 Score=30.45 Aligned_cols=69 Identities=13% Similarity=-0.053 Sum_probs=50.1
Q ss_pred CchhHHHHHHhhcCCCCCCcCHHHHHHHH---HhhCCCCCCcHHHHHHHHHHHhccC--------CCCCccHHHHHhcHh
Q 048599 265 DFPSAEETFVELDTNKDKLLEVEELKPIF---SYLHPGEISYAKYYSRHLIHEADDN--------RDGNLTLDEMLNHEY 333 (354)
Q Consensus 265 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l---~~~~~~~~~~~~~~~~~l~~~~D~~--------~dG~Is~~EF~~~~~ 333 (354)
....++.+|..+ ..+.|.++.+.+..+| .... ++...+.++++.|+..+=.. +.+.++++.|..
T Consensus 14 ~p~~v~~~f~~~-~~~~~~m~~~~l~~fl~~l~~~q-~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~~f~~--- 88 (537)
T PLN02223 14 QPDLILNFFGNE-FHGYDDDMPELLPRFIELLDTEK-DEDGAGLNAAEKIAAELKRRKCDILAFRNLRCLELDHLNE--- 88 (537)
T ss_pred CcHHHHHHHHHh-hcCCCCCCHHHHHHHHHHHHHhc-ccccCCHHHHHHHHHHHHhhcccchhhhhccccCHHHHHH---
Confidence 557789999998 4778999999999988 5443 44456677777777754221 236699999999
Q ss_pred hhhccc
Q 048599 334 IFYNTV 339 (354)
Q Consensus 334 ~f~~~~ 339 (354)
|+-+.
T Consensus 89 -~L~s~ 93 (537)
T PLN02223 89 -FLFST 93 (537)
T ss_pred -HhcCc
Confidence 76664
No 167
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=39.04 E-value=21 Score=27.91 Aligned_cols=8 Identities=0% Similarity=0.351 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q 048599 8 ALLTTAFV 15 (354)
Q Consensus 8 ~~~~~~~~ 15 (354)
++|++++|
T Consensus 7 iii~~i~l 14 (130)
T PF12273_consen 7 IIIVAILL 14 (130)
T ss_pred HHHHHHHH
Confidence 33333333
No 168
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=38.97 E-value=71 Score=24.85 Aligned_cols=27 Identities=11% Similarity=0.043 Sum_probs=18.8
Q ss_pred HHHHHHhhcCCCCCCcCHHHHHHHHHh
Q 048599 269 AEETFVELDTNKDKLLEVEELKPIFSY 295 (354)
Q Consensus 269 ~~~~F~~~D~d~dG~Is~~El~~~l~~ 295 (354)
+..+...||++++|.|+.-+++..|..
T Consensus 99 ln~Ll~vyD~~rtG~I~vls~KvaL~~ 125 (127)
T PF09068_consen 99 LNWLLNVYDSQRTGKIRVLSFKVALIT 125 (127)
T ss_dssp HHHHHHHH-TT--SEEEHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeeehhHHHHHHHH
Confidence 445678889999999999998887654
No 169
>PRK13183 psbN photosystem II reaction center protein N; Provisional
Probab=38.56 E-value=55 Score=20.34 Aligned_cols=29 Identities=21% Similarity=0.118 Sum_probs=17.3
Q ss_pred CchHHHHHHHHHHHHHHHHhcC-CCCCCCC
Q 048599 1 MSKAVAYALLTTAFVLFFVFSP-IQPHDHN 29 (354)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 29 (354)
|.-++++.+.++++++.+.-++ |..++++
T Consensus 4 me~A~~~~i~i~~lL~~~TgyaiYtaFGpp 33 (46)
T PRK13183 4 MSPALSLAITILAILLALTGFGIYTAFGPP 33 (46)
T ss_pred cchhHHHHHHHHHHHHHHhhheeeeccCCc
Confidence 3344555556666666665555 7777766
No 170
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=38.40 E-value=1.9e+02 Score=30.15 Aligned_cols=140 Identities=13% Similarity=0.197 Sum_probs=76.1
Q ss_pred HhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhcccccCC
Q 048599 181 AGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFEDD 260 (354)
Q Consensus 181 ~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~~~ 260 (354)
..|++..+-..|...-..|+..+++.+|......-+.. ..+.+-+... .-..+.++|++|.......+-.-...
T Consensus 143 ~~wlrk~~ysvd~~~~~~isard~k~~l~qvn~k~~~~--kfl~e~~ted-~~~k~dlsf~~f~~ly~~lmfs~~~a--- 216 (1267)
T KOG1264|consen 143 ERWLRKQIYSVDQTRENSISARDLKTILPQVNFKVSSA--KFLKEKFTED-GARKDDLSFEQFHLLYKKLMFSQQKA--- 216 (1267)
T ss_pred HHHHHhhheeccchhhhheeHHhhhcccccceEEechH--HHHHHHHhHh-hhccccccHHHHHHHHHHHhhccchh---
Confidence 35677788788877777899999999987665421211 1222333332 23456799999977655443210000
Q ss_pred CCCCCchhHHHHHHh--hcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccC-----CCCCccHHHHHh
Q 048599 261 GDGTDFPSAEETFVE--LDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDN-----RDGNLTLDEMLN 330 (354)
Q Consensus 261 ~~~~~~~~~~~~F~~--~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~-----~dG~Is~~EF~~ 330 (354)
........|-. -+.-.--.++..||+++|..............+..++..+=.| ..-.+.+.||+.
T Consensus 217 ----~l~e~~~~~~~~~~~~~d~~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D~~re~~EPyl~v~EFv~ 289 (1267)
T KOG1264|consen 217 ----ILLEFKKDFILGNTDRPDASVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDDTMRETAEPYLFVDEFVT 289 (1267)
T ss_pred ----hhhcccchhhhcCCCCccceEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhhhhhhccCcceeHHHHHH
Confidence 00011111211 1212225789999999987543222222223455555544222 345699999999
No 171
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=38.31 E-value=39 Score=26.73 Aligned_cols=54 Identities=11% Similarity=0.144 Sum_probs=31.1
Q ss_pred CCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccC-------CCCCccHHHHHhcHhhhhccc
Q 048599 281 DKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDN-------RDGNLTLDEMLNHEYIFYNTV 339 (354)
Q Consensus 281 dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~-------~dG~Is~~EF~~~~~~f~~~~ 339 (354)
=+.||+.||.++-+... ++...+..++..+..+ ..+.|+|+.|...+..|+...
T Consensus 5 ~~~lsp~eF~qLq~y~e-----ys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~d 65 (138)
T PF14513_consen 5 WVSLSPEEFAQLQKYSE-----YSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEVD 65 (138)
T ss_dssp -S-S-HHHHHHHHHHHH-----H----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT-S
T ss_pred eeccCHHHHHHHHHHHH-----HHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcCC
Confidence 47899999999776541 4455677777776332 355799999999666665443
No 172
>PF12419 DUF3670: SNF2 Helicase protein ; InterPro: IPR022138 This domain family is found in bacteria, archaea and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF00271 from PFAM, PF00176 from PFAM. Most of the proteins in this family are annotated as SNF2 helicases but there is little accompanying literature to confirm this.
Probab=36.39 E-value=49 Score=26.23 Aligned_cols=51 Identities=22% Similarity=0.203 Sum_probs=40.5
Q ss_pred CCCCcCHHHHHHHHHhh------CCCCCCcHHHHHHHHHHHhccCCCCC-ccHHHHHh
Q 048599 280 KDKLLEVEELKPIFSYL------HPGEISYAKYYSRHLIHEADDNRDGN-LTLDEMLN 330 (354)
Q Consensus 280 ~dG~Is~~El~~~l~~~------~~~~~~~~~~~~~~l~~~~D~~~dG~-Is~~EF~~ 330 (354)
|+-.||.+||.+++..- ...-..++.+++..+...+...+.+. +|..|-++
T Consensus 80 Gd~~Ls~eEf~~L~~~~~~LV~~rg~WV~ld~~~l~~~~~~~~~~~~~~~lt~~e~Lr 137 (141)
T PF12419_consen 80 GDEELSEEEFEQLVEQKRPLVRFRGRWVELDPEELRRALAFLEKAPKGEKLTLAEALR 137 (141)
T ss_pred CCEECCHHHHHHHHHcCCCeEEECCEEEEECHHHHHHHHHHHHhccccCCCCHHHHHH
Confidence 66789999999998842 22225688999999999998877664 99999876
No 173
>PF07499 RuvA_C: RuvA, C-terminal domain; InterPro: IPR011114 In prokaryotes, RuvA, RuvB, and RuvC process the universal DNA intermediate of homologous recombination, termed Holliday junction. The tetrameric DNA helicase RuvA specifically binds to the Holliday junction and facilitates the isomerization of the junction from the stacked folded configuration to the square-planar structure []. In the RuvA tetramer, each subunit consists of three domains, I, II and III, where I and II form the major core that is responsible for Holliday junction binding and base pair rearrangements of Holliday junction executed at the crossover point, whereas domain III regulates branch migration through direct contact with RuvB. The domain represents the C-terminal domain III of RuvA. This domain plays a significant role in the ATP-dependent branch migration of the hetero-duplex through direct contact with RuvB []. Within the Holliday junction, this domain makes no interaction with the DNA.; GO: 0005524 ATP binding, 0009378 four-way junction helicase activity, 0006281 DNA repair, 0006310 DNA recombination, 0009379 Holliday junction helicase complex; PDB: 1HJP_A 1CUK_A 1C7Y_A 1IXS_A 1IXR_B 1BVS_E 2ZTC_A 2ZTD_B 2H5X_A.
Probab=36.23 E-value=1e+02 Score=19.13 Aligned_cols=39 Identities=13% Similarity=0.268 Sum_probs=28.3
Q ss_pred HHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhcH
Q 048599 287 EELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNHE 332 (354)
Q Consensus 287 ~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~~ 332 (354)
+|....|..+| +++.++...++.+.. ...++.++.++.-
T Consensus 4 ~d~~~AL~~LG-----y~~~e~~~av~~~~~--~~~~~~e~~ik~a 42 (47)
T PF07499_consen 4 EDALEALISLG-----YSKAEAQKAVSKLLE--KPGMDVEELIKQA 42 (47)
T ss_dssp HHHHHHHHHTT-----S-HHHHHHHHHHHHH--STTS-HHHHHHHH
T ss_pred HHHHHHHHHcC-----CCHHHHHHHHHHhhc--CCCCCHHHHHHHH
Confidence 57778888886 778889999988865 4557788877743
No 174
>PLN02230 phosphoinositide phospholipase C 4
Probab=36.14 E-value=89 Score=31.32 Aligned_cols=68 Identities=9% Similarity=0.115 Sum_probs=44.4
Q ss_pred HhHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhc-------CCCCCCeeHHHHHHHHHH
Q 048599 181 AGWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMD-------DDNDGKLNLDEFLENTYR 249 (354)
Q Consensus 181 ~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D-------~d~dg~I~~~eF~~~~~~ 249 (354)
...++.+|..+-.+ ++.++.++|..+|..........+...+..++..+- .-+.+.++.+.|..++..
T Consensus 28 ~~ei~~lf~~~s~~-~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s 102 (598)
T PLN02230 28 VADVRDLFEKYADG-DAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFS 102 (598)
T ss_pred cHHHHHHHHHHhCC-CCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcC
Confidence 35678899999544 489999999999976543211223344555554321 123456999999998864
No 175
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=35.87 E-value=1.8e+02 Score=21.53 Aligned_cols=64 Identities=19% Similarity=0.154 Sum_probs=37.4
Q ss_pred hHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHH
Q 048599 182 GWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRT 250 (354)
Q Consensus 182 ~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~ 250 (354)
..+...|..+-. +|.|.+..|.+++.-..+ .+.-.+....+-+..... ...|+.+|...++..+
T Consensus 30 ~~VE~RFd~La~--dG~L~rs~Fg~CIGM~dS--keFA~eLFdALaRrr~i~-~~~I~k~eL~efW~qi 93 (100)
T PF08414_consen 30 KEVEKRFDKLAK--DGLLPRSDFGECIGMKDS--KEFAGELFDALARRRGIK-GDSITKDELKEFWEQI 93 (100)
T ss_dssp HHHHHHHHHH-B--TTBEEGGGHHHHHT--S---HHHHHHHHHHHHHHTT---SSEE-HHHHHHHHHHH
T ss_pred HHHHHHHHHhCc--CCcccHHHHHHhcCCccc--HHHHHHHHHHHHHhcCCc-cCCcCHHHHHHHHHHh
Confidence 345668888866 899999999999863321 333333334444444333 4679999987766543
No 176
>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=32.42 E-value=51 Score=30.78 Aligned_cols=59 Identities=20% Similarity=0.179 Sum_probs=44.4
Q ss_pred hhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCCCCCccHHHHHhc
Q 048599 267 PSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNRDGNLTLDEMLNH 331 (354)
Q Consensus 267 ~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~dG~Is~~EF~~~ 331 (354)
.....+|-.+- --+|+||-.--+..+-.. .+....+-.+++..|.|+||.++-+||.-+
T Consensus 444 ~~yde~fy~l~-p~~gk~sg~~ak~~mv~s-----klpnsvlgkiwklad~d~dg~ld~eefala 502 (532)
T KOG1954|consen 444 PTYDEIFYTLS-PVNGKLSGRNAKKEMVKS-----KLPNSVLGKIWKLADIDKDGMLDDEEFALA 502 (532)
T ss_pred cchHhhhhccc-ccCceeccchhHHHHHhc-----cCchhHHHhhhhhhcCCcccCcCHHHHHHH
Confidence 45667777663 346888887776655432 366778899999999999999999999753
No 177
>KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only]
Probab=32.34 E-value=1e+02 Score=29.12 Aligned_cols=58 Identities=17% Similarity=0.193 Sum_probs=40.3
Q ss_pred CCCCceeHHhHHHHhhhhhhhhcccccchHhHHHHHHhHhcCCCCCcccHHHHHHhhCCC
Q 048599 152 DGDGEISFYEYLPQFSKQDIEKNGMVHGQAGWWKEQFDNADVDSNGTLNFDEFYNFLHPE 211 (354)
Q Consensus 152 ~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~ 211 (354)
+|+...+-.||+......+.... ..-..+.++.+-+.+|.|.+|.|+.+|--.+|+..
T Consensus 40 agds~at~nefc~~~~~~c~s~~--dklg~EAir~iHrqmDDD~nG~Id~~ESdeFlrEd 97 (575)
T KOG4403|consen 40 AGDSRATRNEFCEVDAPECKSEQ--DKLGYEAIRDIHRQMDDDHNGSIDVEESDEFLRED 97 (575)
T ss_pred cCCchhhhccchhcCCchhhccc--chhhHHHHHHHHHhcccccCCCcccccchHHHHHH
Confidence 56667777778765554332211 11124568889999999999999999988888644
No 178
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=32.26 E-value=53 Score=23.85 Aligned_cols=26 Identities=12% Similarity=0.139 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCC
Q 048599 4 AVAYALLTTAFVLFFVFSPIQPHDHN 29 (354)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (354)
+++|++.+.+++-+++..|..|+...
T Consensus 51 ~tvy~vg~~~v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 51 VTVYIVGAGFVFTLLITLPPWPWYRR 76 (101)
T ss_pred HHHHHHHHHHHHHHHhcCCCchhhhc
Confidence 56777777778888888888887544
No 179
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=32.02 E-value=58 Score=20.02 Aligned_cols=30 Identities=23% Similarity=0.213 Sum_probs=22.1
Q ss_pred HHHHhchhhc-CCCCCCCcCHHHHHHHHHHH
Q 048599 104 RLIYLFPLID-NEPKDGVLSLNELDNWNVEL 133 (354)
Q Consensus 104 ~l~~~F~~~D-~d~~dG~Is~~El~~~l~~~ 133 (354)
.+..+|.++- +++...+++..||+.+|..-
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~E 37 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEKE 37 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHHH
Confidence 4778888885 23136799999999988654
No 180
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=31.27 E-value=89 Score=17.33 Aligned_cols=16 Identities=25% Similarity=0.374 Sum_probs=6.3
Q ss_pred HHHHHHHHHHhcCCCC
Q 048599 10 LTTAFVLFFVFSPIQP 25 (354)
Q Consensus 10 ~~~~~~~~~~~~~~~~ 25 (354)
.+++++++.+++.-+|
T Consensus 12 ~tlgilffAI~FRePP 27 (29)
T PF01405_consen 12 GTLGILFFAIFFREPP 27 (29)
T ss_dssp HHHHHHHHHHHSS---
T ss_pred HHHHHHHhhhhccCCC
Confidence 3344555555554444
No 181
>KOG1785 consensus Tyrosine kinase negative regulator CBL [Defense mechanisms]
Probab=30.54 E-value=4.7e+02 Score=24.70 Aligned_cols=86 Identities=13% Similarity=0.116 Sum_probs=55.5
Q ss_pred CCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHHHHhhhcccccCCCCCCCchhHHHHHH
Q 048599 195 SNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDNDGKLNLDEFLENTYRTYKSYAEFEDDGDGTDFPSAEETFV 274 (354)
Q Consensus 195 ~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ 274 (354)
..-.+-...|.++|+.... -.+--+...+-..+|...++.|+--||-- +.+... ....+-+-++
T Consensus 187 ~k~ivPW~~F~q~L~~~Hp---i~~gleAmaLktTIDLtcnd~iS~FEFDv-FTRLFq------------Pw~tllkNWq 250 (563)
T KOG1785|consen 187 KKTIVPWKTFRQALHKVHP---ISSGLEAMALKTTIDLTCNDFISNFEFDV-FTRLFQ------------PWKTLLKNWQ 250 (563)
T ss_pred CcccccHHHHHHHHHhcCC---CcchhHHHHhhceeccccccceeeehhhh-HHHhhc------------cHHHHHHhhh
Confidence 3446778889998876643 12223455677778888899888777733 333222 3344555566
Q ss_pred hhcCCCCC---CcCHHHHHHHHHhh
Q 048599 275 ELDTNKDK---LLEVEELKPIFSYL 296 (354)
Q Consensus 275 ~~D~d~dG---~Is~~El~~~l~~~ 296 (354)
.+-+-+-| +++.+|++.-|.++
T Consensus 251 ~LavtHPGYmAFLTYDEVk~RLqk~ 275 (563)
T KOG1785|consen 251 TLAVTHPGYMAFLTYDEVKARLQKY 275 (563)
T ss_pred hhhccCCceeEEeeHHHHHHHHHHH
Confidence 66677777 47889998877744
No 182
>PF03979 Sigma70_r1_1: Sigma-70 factor, region 1.1; InterPro: IPR007127 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognised by the major sigma factors [, ]. This entry represents Region 1.1 which modulates DNA binding by region 2 and 4 when sigma is unbound by the core RNA polymerase [, ]. Region 1.1 is also involved in promoter binding.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2K6X_A.
Probab=29.16 E-value=71 Score=22.57 Aligned_cols=35 Identities=11% Similarity=0.112 Sum_probs=22.8
Q ss_pred CCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHhccCC
Q 048599 280 KDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEADDNR 319 (354)
Q Consensus 280 ~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~D~~~ 319 (354)
..|+||.+|+..+|... .++.++++.++..+...+
T Consensus 18 ~~G~lT~~eI~~~L~~~-----~~~~e~id~i~~~L~~~g 52 (82)
T PF03979_consen 18 KKGYLTYDEINDALPED-----DLDPEQIDEIYDTLEDEG 52 (82)
T ss_dssp HHSS-BHHHHHHH-S-S--------HHHHHHHHHHHHTT-
T ss_pred hcCcCCHHHHHHHcCcc-----CCCHHHHHHHHHHHHHCC
Confidence 46999999999987643 377888999998775443
No 183
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.01 E-value=2.6e+02 Score=22.21 Aligned_cols=89 Identities=18% Similarity=0.232 Sum_probs=53.8
Q ss_pred HhchhhcCCCCCCCcCHHHHHHHHHHHh--hhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccchHhHH
Q 048599 107 YLFPLIDNEPKDGVLSLNELDNWNVELA--VDRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQAGWW 184 (354)
Q Consensus 107 ~~F~~~D~d~~dG~Is~~El~~~l~~~~--~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~~~l 184 (354)
-+|+.+..| |.++..|...+..-+. .......+..++.....-+...+++..|...+...... ....+-+
T Consensus 34 Llf~Vm~AD---G~v~~~E~~a~r~il~~~f~i~~~~l~ali~~~e~~~~Ea~d~y~fts~l~r~Ld~-----e~R~eli 105 (148)
T COG4103 34 LLFHVMEAD---GTVSESEREAFRAILKENFGIDGEELDALIEAGEEAGYEAIDLYSFTSVLKRHLDE-----EQRLELI 105 (148)
T ss_pred HHHHHHhcc---cCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCH-----HHHHHHH
Confidence 688888876 8999999776443332 33446677777766655566778888888777642211 1223334
Q ss_pred HHHHhHhcCCCCCcccHHHHH
Q 048599 185 KEQFDNADVDSNGTLNFDEFY 205 (354)
Q Consensus 185 ~~~F~~~D~d~~G~Is~~E~~ 205 (354)
..++... ..||.++..|-.
T Consensus 106 ~~mweIa--~ADg~l~e~Ed~ 124 (148)
T COG4103 106 GLMWEIA--YADGELDESEDH 124 (148)
T ss_pred HHHHHHH--HccccccHHHHH
Confidence 4455544 345566655543
No 184
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.69 E-value=42 Score=31.06 Aligned_cols=64 Identities=14% Similarity=0.213 Sum_probs=46.5
Q ss_pred CCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHH-HhccCCCCCccHHHHHh
Q 048599 264 TDFPSAEETFVELDTNKDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIH-EADDNRDGNLTLDEMLN 330 (354)
Q Consensus 264 ~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~-~~D~~~dG~Is~~EF~~ 330 (354)
...+.+++.|+.+|..++|+|+-.=++.++..+. ..+++.+.-.+++ .+|...-|.|-...|+.
T Consensus 306 ~~s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N---~~vse~a~v~l~~~~l~pE~~~iil~~d~lg 370 (449)
T KOG2871|consen 306 NPSEQLRRNFHAYDPEDNNFISCSGLQIVMTALN---RLVSEPAYVMLMRQPLDPESLGIILLEDFLG 370 (449)
T ss_pred CCCHHHHhhhhccCccCCCeeecHHHHHHHHHhc---ccccCHHHHHHhcCccChhhcceEEeccccc
Confidence 3468899999999999999999999998888762 2344444444443 56666667776666665
No 185
>PLN02222 phosphoinositide phospholipase C 2
Probab=26.83 E-value=1.3e+02 Score=30.02 Aligned_cols=65 Identities=18% Similarity=0.243 Sum_probs=46.2
Q ss_pred hHHHHHHhHhcCCCCCcccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcC-CCCCCeeHHHHHHHHHH
Q 048599 182 GWWKEQFDNADVDSNGTLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDD-DNDGKLNLDEFLENTYR 249 (354)
Q Consensus 182 ~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~-d~dg~I~~~eF~~~~~~ 249 (354)
..+..+|..+-. ++.++.++|..+|...... ...+.+.+..++..+.. ...+.++++.|..++..
T Consensus 25 ~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~-~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s 90 (581)
T PLN02222 25 REIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQ-DKATREDAQSIINSASSLLHRNGLHLDAFFKYLFG 90 (581)
T ss_pred HHHHHHHHHhcC--CCCcCHHHHHHHHHHhcCC-ccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcC
Confidence 457888888853 4799999999999765431 22345567777776532 23567999999998875
No 186
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=26.66 E-value=2.2e+02 Score=19.58 Aligned_cols=50 Identities=8% Similarity=0.005 Sum_probs=32.9
Q ss_pred CCCeeHHHHHHHHHHHhhhcccccCCCCCCCchhHHHHHHhhcCCCCCCcCHHHHHHHHHhhC
Q 048599 235 DGKLNLDEFLENTYRTYKSYAEFEDDGDGTDFPSAEETFVELDTNKDKLLEVEELKPIFSYLH 297 (354)
Q Consensus 235 dg~I~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~ 297 (354)
+-.++|...+..+...+ ....+..+...|+.=..+.|+++||.+.++.+.
T Consensus 6 sp~~~F~~L~~~l~~~l-------------~~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~IV 55 (70)
T PF12174_consen 6 SPWMPFPMLFSALSKHL-------------PPSKMDLLQKHYEEFKKKKISREEFVRKLRQIV 55 (70)
T ss_pred CCcccHHHHHHHHHHHC-------------CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 34567776666666544 233344444555555789999999999998773
No 187
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=26.02 E-value=3.3e+02 Score=21.59 Aligned_cols=34 Identities=15% Similarity=0.242 Sum_probs=24.8
Q ss_pred CCCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHHh
Q 048599 280 KDKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHEA 315 (354)
Q Consensus 280 ~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~~ 315 (354)
..+.|+.+-|+..|+.+- +..++.+-+.+||..+
T Consensus 45 ~~~~Id~egF~~Fm~~yL--e~d~P~~lc~hLF~sF 78 (138)
T PF14513_consen 45 PEEPIDYEGFKLFMKTYL--EVDLPEDLCQHLFLSF 78 (138)
T ss_dssp ETTEE-HHHHHHHHHHHT--T-S--HHHHHHHHHHS
T ss_pred CCCCcCHHHHHHHHHHHH--cCCCCHHHHHHHHHHH
Confidence 456899999999999875 3448888899999876
No 188
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=25.90 E-value=1.5e+02 Score=23.00 Aligned_cols=90 Identities=20% Similarity=0.223 Sum_probs=47.7
Q ss_pred HHHhchhhcCCCCCCCcCHHHHHHHHHHHhh--hhcHHHHHHHHHHHcCCCCCceeHHhHHHHhhhhhhhhcccccchHh
Q 048599 105 LIYLFPLIDNEPKDGVLSLNELDNWNVELAV--DRLSYTTQKQIELSDRDGDGEISFYEYLPQFSKQDIEKNGMVHGQAG 182 (354)
Q Consensus 105 l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~--~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~~~~~~~~~~~~~~~~ 182 (354)
+-.+.-.+-.- ||.|+.+|...+...+.. .........++..++.-....+++.+|+..+..... ......
T Consensus 26 ~~~ll~~~a~a--DG~v~~~E~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~r~~ 98 (140)
T PF05099_consen 26 LLALLAAVAKA--DGEVDPEEIEAIRQLLAERFGLSPEEAEELIELADELKQEPIDLEELLRELRDSLS-----PEERED 98 (140)
T ss_dssp HHHHHHHHHHT--TSS--CHHHHHHHHHHHHCGCGSCHHHHHHHHHHCHHHHHCCHHHHHHHHHCTS-------HHHHHH
T ss_pred HHHHHHHHHHc--CCCCCHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhc-----hHHHHH
Confidence 33444444444 799999999887665522 223455566666555544456778888776655211 112233
Q ss_pred HHHHHHhHhcCCCCCcccHHH
Q 048599 183 WWKEQFDNADVDSNGTLNFDE 203 (354)
Q Consensus 183 ~l~~~F~~~D~d~~G~Is~~E 203 (354)
-++.++...-.| |.++..|
T Consensus 99 ll~~l~~ia~AD--G~~~~~E 117 (140)
T PF05099_consen 99 LLRMLIAIAYAD--GEISPEE 117 (140)
T ss_dssp HHHHHHHHCTCT--TC-SCCH
T ss_pred HHHHHHHHHhcC--CCCCHHH
Confidence 455566666554 4555444
No 189
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=24.84 E-value=3.3e+02 Score=21.10 Aligned_cols=94 Identities=16% Similarity=0.189 Sum_probs=53.2
Q ss_pred CceeHHhHHHHhhhhhhhhc-ccccchHhHHHHHHhHhcCCC--CCcccHHHHHHhhCCCC--------C-CC-h-----
Q 048599 155 GEISFYEYLPQFSKQDIEKN-GMVHGQAGWWKEQFDNADVDS--NGTLNFDEFYNFLHPED--------S-NN-T----- 216 (354)
Q Consensus 155 G~I~~~EF~~~~~~~~~~~~-~~~~~~~~~l~~~F~~~D~d~--~G~Is~~E~~~~l~~~~--------~-~~-~----- 216 (354)
+.|-|.-|...+.-....+. .+..-.+..+.++|+....+. +..|+..++..+|...- . .+ +
T Consensus 13 n~IrfsaYRtA~KLR~lQk~~~l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~ 92 (127)
T PF09068_consen 13 NNIRFSAYRTAMKLRFLQKRLCLDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVD 92 (127)
T ss_dssp TT-SSHHHHHHHHHHHHHHHTTGGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----
T ss_pred hhHHHHHhHHHHHHHHHHHHHhheeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHH
Confidence 34667777776654333221 112223445667887776554 36799999998885332 1 11 1
Q ss_pred HhhHHHHHHHHHhhcCCCCCCeeHHHHHHHHH
Q 048599 217 AIQRWLLREKLERMDDDNDGKLNLDEFLENTY 248 (354)
Q Consensus 217 ~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 248 (354)
...+-.+..++..+|+++.|+|+.-.|..++.
T Consensus 93 ~a~~L~ln~Ll~vyD~~rtG~I~vls~KvaL~ 124 (127)
T PF09068_consen 93 LAVDLLLNWLLNVYDSQRTGKIRVLSFKVALI 124 (127)
T ss_dssp HHHHHHHHHHHHHH-TT--SEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeeehhHHHHHHH
Confidence 23344567789999999999999999876654
No 190
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.23 E-value=54 Score=30.37 Aligned_cols=67 Identities=18% Similarity=0.094 Sum_probs=47.0
Q ss_pred HHHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhhcHHH-HHHHHHHHcCCCCCceeHHhHHHHhhh
Q 048599 101 ITSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDRLSYT-TQKQIELSDRDGDGEISFYEYLPQFSK 168 (354)
Q Consensus 101 ~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~-~~~~~~~~D~~~dG~I~~~EF~~~~~~ 168 (354)
..+.+++.|+..|.. ++|+|+..-++.++..+.....+.. +.-+=+.+|...-|.|-...|...+..
T Consensus 307 ~s~q~rR~f~a~d~~-d~nfis~s~~~~vm~~~N~~vse~a~v~l~~~~l~pE~~~iil~~d~lg~~~p 374 (449)
T KOG2871|consen 307 PSEQLRRNFHAYDPE-DNNFISCSGLQIVMTALNRLVSEPAYVMLMRQPLDPESLGIILLEDFLGEFFP 374 (449)
T ss_pred CCHHHHhhhhccCcc-CCCeeecHHHHHHHHHhcccccCHHHHHHhcCccChhhcceEEeccccccccC
Confidence 456799999999999 9999999999999988774333332 222224556666677766666655443
No 191
>PF02761 Cbl_N2: CBL proto-oncogene N-terminus, EF hand-like domain; InterPro: IPR014741 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the EF hand-like domain.; GO: 0005509 calcium ion binding; PDB: 3OP0_A 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B ....
Probab=23.67 E-value=2.8e+02 Score=19.88 Aligned_cols=50 Identities=10% Similarity=-0.028 Sum_probs=37.4
Q ss_pred CCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCCCCceeHHhHHHHhh
Q 048599 118 DGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDGDGEISFYEYLPQFS 167 (354)
Q Consensus 118 dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~dG~I~~~EF~~~~~ 167 (354)
.-.|...+|...|..........+...+=..+|...+|.||-=||-.+..
T Consensus 20 r~IVPW~~F~~~L~~~h~~~~~~~~~aLk~TiDlT~n~~iS~FeFdvFtR 69 (85)
T PF02761_consen 20 RTIVPWSEFRQALQKVHPISSGLEAMALKSTIDLTCNDYISNFEFDVFTR 69 (85)
T ss_dssp -SEEEHHHHHHHHHHHS--SSHHHHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CeEeeHHHHHHHHHHhcCCCchHHHHHHHHHHhcccCCccchhhhHHHHH
Confidence 46799999999998887766666666777789999999999888776544
No 192
>PF05434 Tmemb_9: TMEM9; InterPro: IPR008853 This family contains several eukaryotic transmembrane proteins which are homologous to Homo sapiens transmembrane protein 9 Q9P0T7 from SWISSPROT. The TMEM9 gene encodes a 183 amino-acid protein that contains an N-terminal signal peptide, a single transmembrane region, three potential N-glycosylation sites and three conserved cys-rich domains in the N terminus, but no known functional domains. The protein is highly conserved between species from Caenorhabditis elegans to H. sapiens and belongs to a novel family of transmembrane proteins. The exact function of TMEM9 is unknown although it has been found to be widely expressed and localised to the late endosomes and lysosomes []. Members of this family contain CXCXC repeats IPR004153 from INTERPRO in their N-terminal region.; GO: 0016021 integral to membrane
Probab=23.51 E-value=24 Score=28.14 Aligned_cols=18 Identities=11% Similarity=0.349 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 048599 4 AVAYALLTTAFVLFFVFS 21 (354)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~ 21 (354)
++|++++++++|++|+++
T Consensus 57 vVIivl~Vi~lLvlYM~f 74 (149)
T PF05434_consen 57 VVIIVLWVIGLLVLYMLF 74 (149)
T ss_pred EEEEeHHHHHHHHHHHHH
Confidence 345566777777765555
No 193
>PF08461 HTH_12: Ribonuclease R winged-helix domain; InterPro: IPR013668 This domain is found at the amino terminus of Ribonuclease R and a number of presumed transcriptional regulatory proteins from archaea.
Probab=23.37 E-value=1.6e+02 Score=19.88 Aligned_cols=37 Identities=16% Similarity=0.158 Sum_probs=31.8
Q ss_pred CCCCcCHHHHHHHHHHHhhhhcHHHHHHHHHHHcCCC
Q 048599 117 KDGVLSLNELDNWNVELAVDRLSYTTQKQIELSDRDG 153 (354)
Q Consensus 117 ~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~~~ 153 (354)
.++-++..++...|...+...+...+.+.++.++.+|
T Consensus 10 ~~~P~g~~~l~~~L~~~g~~~se~avRrrLr~me~~G 46 (66)
T PF08461_consen 10 SDKPLGRKQLAEELKLRGEELSEEAVRRRLRAMERDG 46 (66)
T ss_pred cCCCCCHHHHHHHHHhcChhhhHHHHHHHHHHHHHCC
Confidence 3677999999999988888888889999999998876
No 194
>PHA02291 hypothetical protein
Probab=22.73 E-value=80 Score=23.47 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCC
Q 048599 4 AVAYALLTTAFVLFFVFSPIQPH 26 (354)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~ 26 (354)
.++|+++.+.+++.++.++.+..
T Consensus 6 ~iFYiL~~~VL~~si~sY~~sS~ 28 (132)
T PHA02291 6 SIFYILVVIVLAFSISSYYISSF 28 (132)
T ss_pred hhHHHHHHHHHHHHHHHHhhhee
Confidence 67777777777777777764443
No 195
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=22.64 E-value=64 Score=30.27 Aligned_cols=22 Identities=14% Similarity=0.391 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCC
Q 048599 8 ALLTTAFVLFFVFSPIQPHDHN 29 (354)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~ 29 (354)
=+||+|++++++++...|+...
T Consensus 205 DvWS~GViLy~ml~G~~PF~d~ 226 (370)
T KOG0583|consen 205 DVWSLGVILYVLLCGRLPFDDS 226 (370)
T ss_pred hhhhhHHHHHHHHhCCCCCCCc
Confidence 4799999999999999999765
No 196
>PRK14748 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=22.43 E-value=1.4e+02 Score=16.45 Aligned_cols=18 Identities=28% Similarity=0.329 Sum_probs=7.3
Q ss_pred CchHHHHHHHHHHHHHHH
Q 048599 1 MSKAVAYALLTTAFVLFF 18 (354)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~ 18 (354)
|+-.++.-++.+.+++-|
T Consensus 1 Ms~~vi~G~ilv~lLlgY 18 (29)
T PRK14748 1 MSAGVITGVLLVFLLLGY 18 (29)
T ss_pred CcHHHHHHHHHHHHHHHH
Confidence 444444433333333333
No 197
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=22.38 E-value=1.4e+02 Score=16.41 Aligned_cols=20 Identities=15% Similarity=0.270 Sum_probs=8.6
Q ss_pred CchHHHHHHHHHHHHHHHHh
Q 048599 1 MSKAVAYALLTTAFVLFFVF 20 (354)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (354)
|+-.++.-++.+.+++.++.
T Consensus 1 Ms~~vi~g~llv~lLl~YLv 20 (29)
T PRK14750 1 MNFSIVCGALLVLLLLGYLV 20 (29)
T ss_pred CcHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444443
No 198
>PF02402 Lysis_col: Lysis protein; InterPro: IPR003059 The DNA sequence of the entire colicin E2 operon has been determined []. The operon comprises the colicin activity gene (ceaB), the colicin immunity gene (ceiB) and the lysis gene (celB), which is essential for colicin release from producing cells []. A putative LexA binding site is located upstream from ceaB, and a rho-independent terminator structure is located downstream from celB []. Comparison of the amino acid sequences of colicin E2 and cloacin DF13 reveal extensive similarity. These colicins have different modes of action and recognise different cell surface receptors; the two major regions of heterology at the C terminus, and in the C-terminal end of the central region are thought to correspond to the catalytic and receptor-recognition domains, respectively []. Sequence similarities between colicins E2, A and E1 [] are less striking. The colicin E2 (pyocin) immunity protein does not share similarity with either the colicin E3 or cloacin DF13 [] immunity proteins. By contrast, the lysis proteins of the ColE2, ColE1 and CloDF13 plasmids are almost identical except in the N-terminal regions, which themselves are similar to lipoprotein signal peptides []. Processing of the ColE2 prolysis protein to the mature form is prevented by globomycin, a specific inhibitor of the lipoprotein signal peptidase []. The mature ColE2 lysis protein is located in the cell envelope [].; GO: 0009405 pathogenesis, 0019835 cytolysis, 0019867 outer membrane
Probab=22.27 E-value=42 Score=20.55 Aligned_cols=22 Identities=14% Similarity=0.162 Sum_probs=13.4
Q ss_pred CchHHHHHHHHHHHHHHHHhcC
Q 048599 1 MSKAVAYALLTTAFVLFFVFSP 22 (354)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (354)
|-|+++.++++..+++.-|+..
T Consensus 1 MkKi~~~~i~~~~~~L~aCQaN 22 (46)
T PF02402_consen 1 MKKIIFIGIFLLTMLLAACQAN 22 (46)
T ss_pred CcEEEEeHHHHHHHHHHHhhhc
Confidence 6676666666666555566553
No 199
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=22.04 E-value=1.3e+02 Score=29.99 Aligned_cols=32 Identities=9% Similarity=0.071 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCccc-ccCccccc
Q 048599 9 LLTTAFVLFFVFSPIQPHDHNDRLA-FIGRRFGY 41 (354)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~ 41 (354)
+|++|++++-+++...|+..+ |++ ....|+..
T Consensus 496 ~WSLGvlLy~ML~G~tp~~~~-P~~~ei~~~i~~ 528 (612)
T KOG0603|consen 496 WWSLGVLLYEMLTGRTLFAAH-PAGIEIHTRIQM 528 (612)
T ss_pred hHHHHHHHHHHHhCCCccccC-CchHHHHHhhcC
Confidence 699999999999998888654 322 34456555
No 200
>PLN02228 Phosphoinositide phospholipase C
Probab=21.85 E-value=2.7e+02 Score=27.81 Aligned_cols=65 Identities=15% Similarity=0.180 Sum_probs=46.3
Q ss_pred HHHHHHhchhhcCCCCCCCcCHHHHHHHHHHHhhhh--cHHHHHHHHHHHcCC----CCCceeHHhHHHHhhhh
Q 048599 102 TSRLIYLFPLIDNEPKDGVLSLNELDNWNVELAVDR--LSYTTQKQIELSDRD----GDGEISFYEYLPQFSKQ 169 (354)
Q Consensus 102 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~--~~~~~~~~~~~~D~~----~dG~I~~~EF~~~~~~~ 169 (354)
..++..+|..+-.+ +.++.++|..+|....... ....+..++..+... ..|.++.+.|..++...
T Consensus 23 ~~ei~~if~~~s~~---~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s~ 93 (567)
T PLN02228 23 PVSIKRLFEAYSRN---GKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFSD 93 (567)
T ss_pred cHHHHHHHHHhcCC---CccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcCc
Confidence 34588899888543 5899999999998765432 234566777766432 34679999999988653
No 201
>PHA00003 B internal scaffolding protein
Probab=21.64 E-value=51 Score=24.53 Aligned_cols=56 Identities=11% Similarity=0.145 Sum_probs=36.6
Q ss_pred CCCchhhhhhhhhhhhhhcCCc------cccCCCCCCCCCCCCCccchhhhcccCccccccHHHHHHHhchhhcCCCCCC
Q 048599 46 PTFDPLVLKMNRVTEEKKSGSI------KTRTNANDLENDSYDNEDFEDEYDFFSENGRLNITSRLIYLFPLIDNEPKDG 119 (354)
Q Consensus 46 ~~~~~~~~~~~r~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~F~~~D~d~~dG 119 (354)
-.+||++..+|+.+.++....+ ..+..++. .+.-.+++..||.+ |-
T Consensus 48 LRrdpvq~d~EaERqkr~~iEagk~~c~RrFGgAtc--------------------------ddksa~iya~FD~~--d~ 99 (120)
T PHA00003 48 LRRDPVQQDLEAERQKRADIEAGKAICARRFGGATC--------------------------DDKSAKIYAQFDPN--DR 99 (120)
T ss_pred cccCcccchHHHHHHHHHHHHHHHHHHHHHcCCCCc--------------------------chHHHHHhcccCcc--cc
Confidence 4679999999999888752222 11112222 12245677888887 88
Q ss_pred CcCHHHHHHH
Q 048599 120 VLSLNELDNW 129 (354)
Q Consensus 120 ~Is~~El~~~ 129 (354)
.|...||..+
T Consensus 100 rVQpaEFYRF 109 (120)
T PHA00003 100 RVQPAEFYRF 109 (120)
T ss_pred eechhHheec
Confidence 8999988764
No 202
>PHA02105 hypothetical protein
Probab=20.80 E-value=1.5e+02 Score=19.38 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=27.1
Q ss_pred cccHHHHHHhhCCCCCCChHhhHHHHHHHHHhhcCCC--CCCeeHHHHHHH
Q 048599 198 TLNFDEFYNFLHPEDSNNTAIQRWLLREKLERMDDDN--DGKLNLDEFLEN 246 (354)
Q Consensus 198 ~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~--dg~I~~~eF~~~ 246 (354)
+++++||..++.........+..+.+.++-..+..-. --.++|+||...
T Consensus 4 klt~~~~~~a~~~ndq~eyp~~~e~~~ql~svfsipqi~yvyls~~e~~si 54 (68)
T PHA02105 4 KLTKEDWESAKYQNDQNEYPVELELFDQLKTVFSIPQIKYVYLSYEEFNSI 54 (68)
T ss_pred eecHHHHHHHHHcCccccccccHHHHHHHHHhccccceEEEEEeHHHhccc
Confidence 4678888888765543223333444444444443322 235899999653
No 203
>PRK09510 tolA cell envelope integrity inner membrane protein TolA; Provisional
Probab=20.50 E-value=2.1e+02 Score=27.05 Aligned_cols=19 Identities=32% Similarity=0.508 Sum_probs=12.2
Q ss_pred CCCCch--hhhhhhhhhhhhh
Q 048599 45 VPTFDP--LVLKMNRVTEEKK 63 (354)
Q Consensus 45 ~~~~~~--~~~~~~r~~~~~~ 63 (354)
.+..|| ++..+.|....+.
T Consensus 52 AVmvD~~~v~~q~~~~q~q~~ 72 (387)
T PRK09510 52 AVMVDPGAVVEQYNRQQQQQK 72 (387)
T ss_pred ceecChHHHHHHHHHHHHhHH
Confidence 467777 5666766665554
No 204
>PF11848 DUF3368: Domain of unknown function (DUF3368); InterPro: IPR021799 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is about 50 amino acids in length.
Probab=20.26 E-value=1.1e+02 Score=19.11 Aligned_cols=32 Identities=16% Similarity=0.356 Sum_probs=19.4
Q ss_pred CCCcCHHHHHHHHHhhCCCCCCcHHHHHHHHHHH
Q 048599 281 DKLLEVEELKPIFSYLHPGEISYAKYYSRHLIHE 314 (354)
Q Consensus 281 dG~Is~~El~~~l~~~~~~~~~~~~~~~~~l~~~ 314 (354)
.|.|+ ++++++..+......+++..++.+++.
T Consensus 15 ~GlI~--~~~~~l~~l~~~g~~is~~l~~~~L~~ 46 (48)
T PF11848_consen 15 RGLIS--EVKPLLDRLQQAGFRISPKLIEEILRR 46 (48)
T ss_pred cCChh--hHHHHHHHHHHcCcccCHHHHHHHHHH
Confidence 46666 566666655444466777766666654
Done!