BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048602
(176 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FZ35|PRP1_ARATH Proline-rich protein 1 OS=Arabidopsis thaliana GN=PRP1 PE=2 SV=1
Length = 335
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 27/129 (20%)
Query: 34 VGGQVLCQNCFKSYKEWVNGSNPLKGVTVSLTCMD------DRSRAMCYKSDETDEQGQF 87
VGG +LC+N +++Y P++G + C + ++ + Y SD TD +G F
Sbjct: 214 VGGIILCKNGYETY--------PIQGAKAKIVCSERGSYEKSKNEVVIY-SDPTDFKGYF 264
Query: 88 YMTVDRIINGKELKAKLCSVRLVSSTHADCSIATNFAGGKTGVKLMRSPTSMFRD--IIK 145
++ + I N C V+L +S C TN G TGV P SM+ D +
Sbjct: 265 HVVLTHIKNLSN-----CRVKLYTSPVETCKNPTNVNKGLTGV-----PFSMYSDKNLKL 314
Query: 146 YRVGPFYYT 154
+ VGPFY+T
Sbjct: 315 FNVGPFYFT 323
>sp|Q9LZJ7|PRP3_ARATH Proline-rich protein 3 OS=Arabidopsis thaliana GN=PRP3 PE=2 SV=1
Length = 313
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 22/131 (16%)
Query: 34 VGGQVLCQNCFKSYKEWVNGSNPLKGVTVSLTCMDDRS------RAMCYKSDETDEQGQF 87
V G +LC+N +++Y P+ G + + C D S + Y S+ TD +G F
Sbjct: 188 VDGIILCKNGYETY--------PILGAKIQIVCSDPASYGKSNTEVVIY-SNPTDSKGYF 238
Query: 88 YMTVDRIINGKELKAKLCSVRLVSSTHADCSIATNFAGGKTGVKLMRSPTSMFRD--IIK 145
++++ I K+L C V+L S C TN G TGV L + D +
Sbjct: 239 HLSLTSI---KDLA--YCRVKLYLSPVETCKNPTNVNKGLTGVPLALYGYRFYPDKNLEL 293
Query: 146 YRVGPFYYTTP 156
+ VGPFYYT P
Sbjct: 294 FSVGPFYYTGP 304
>sp|Q03211|PEXLP_TOBAC Pistil-specific extensin-like protein OS=Nicotiana tabacum PE=2
SV=1
Length = 426
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 21/133 (15%)
Query: 34 VGGQVLCQNCFKSY--KEWVNGSNPLKGVTVSLTCMDDRSRAMCYKSDETDEQGQFYMTV 91
V G V C++C SY +N S L+G V L C ++ + TD +G+F +
Sbjct: 291 VSGLVYCKSC-NSYGVPTLLNASL-LQGAVVKLICYGKKTMV---QWATTDNKGEFRIMP 345
Query: 92 DRIINGKELKAKLCSVRLVSSTHADCSIATNFAGGKTG--VKLMRSPTSMFRDII----- 144
+ K C V LV S + +C++ TNF GGK+G +K + P +
Sbjct: 346 KSLTTADVGK---CKVYLVKSPNPNCNVPTNFNGGKSGGLLKPLLPPKQPITPAVVPVQP 402
Query: 145 ----KYRVGPFYY 153
Y VGPF +
Sbjct: 403 PMSDLYGVGPFIF 415
>sp|P13447|LAT52_SOLLC Anther-specific protein LAT52 OS=Solanum lycopersicum GN=LAT52 PE=2
SV=1
Length = 161
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 2 LSMALMLSAAFFMGCTNLAVANYGDASAGVIHVGGQVLCQNCFKSYKEWVNGSNPLKGVT 61
++ A++L +A + LA+AN+ V V G+V C C ++ + S L+G T
Sbjct: 1 MAKAIVLLSALCI----LALANFAHCRPEVFDVEGKVYCDTCRVQFETKL--SENLEGAT 54
Query: 62 VSLTCMDDRSRAMCYKSD-ETDEQGQFYMTVDRIINGKELKAKLCSVRLVSSTHADC 117
V L C + + A + + TD+ G++ +TV NG + +C V +V S DC
Sbjct: 55 VKLQCRNISTEAETFSVEGVTDKDGKYKLTV----NGDH-ENDICEVTVVKSPREDC 106
>sp|O49813|OLEE1_BETPN Olee1-like protein OS=Betula pendula PE=2 SV=1
Length = 166
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 34 VGGQVLCQNCFKSYKEWVNGSNPLKGVTVSLTCMDDRSRAMCYKSD-ETDEQGQFYMTVD 92
V G+V C NC + + S +KG VSL C + + Y SD ETD+ G + + VD
Sbjct: 29 VEGKVYCDNCRTQFVTKL--STYMKGAKVSLECRNREGGTLIYSSDSETDKSGTYRIPVD 86
Query: 93 RIINGKELKAKLCSVRLVSSTHADCS 118
+ + ++C + L S+ DCS
Sbjct: 87 -----GDHEEEICEIALKKSSDPDCS 107
>sp|Q8LGR0|CHE1_CHEAL Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1
Length = 168
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 19 LAVANYGDASAGVIHVGGQVLCQNCFKSYKEWVNGSNPLKGVTVSLTCMDDRSRAMCYKS 78
L++A +A+ V G V C C + + S ++G TV L C + + +K+
Sbjct: 17 LSLAGVANAAENHFKVQGMVYCDTCRIQFMTRI--STIMEGATVKLECRNITAGTQTFKA 74
Query: 79 DE-TDEQGQFYMTVDRIINGKELKAKLCSVRLVSSTHADCSIATNFAGGKTGVKL-MRSP 136
+ TD+ GQ+ + V NG + + +C + LV S +++CS ++ K K+ + S
Sbjct: 75 EAVTDKVGQYSIPV----NG-DFEDDICEIELVKSPNSECSEVSHDVYAKQSAKVSLTSN 129
Query: 137 TSMFRDIIKYRVGPFYYTTPMCEKPDT 163
DI F P+ E P+
Sbjct: 130 NGEASDIRSANALGFMRKEPLKECPEV 156
>sp|P82242|PLAL1_PLALA Major pollen allergen Pla l 1 OS=Plantago lanceolata PE=1 SV=2
Length = 131
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 33 HVGGQVLCQNCFKSYKEWVNG-SNPLKGVTVSLTCMDDRSRAMCYKSDETDEQGQFYMTV 91
HV G+V C C + +N S + G V L C DD + + ETD+ G + + V
Sbjct: 10 HVEGEVYCNVCHS--RNLINELSERMAGAQVQLDCKDDSKKVIYSIGGETDQDGVYRLPV 67
Query: 92 DRIINGKELKAKLCSVRLVSSTHADCSIATNFAGG 126
+ E C ++LV S+ DCS A G
Sbjct: 68 ---VGYHE----DCEIKLVKSSRPDCSEIPKLAKG 95
>sp|Q75M35|OML3_ORYSJ Protein MEI2-like 3 OS=Oryza sativa subsp. japonica GN=ML3 PE=2
SV=2
Length = 955
Score = 37.0 bits (84), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 22 ANYGDASAGVIHVGGQVLCQNCFKSYKEWVNGSNPLKGVTVSLTCMDDRSRAMCYKSD-- 79
N+ +A + G Q L Q C +NG NP+ V+ S +DR R+ + +
Sbjct: 703 GNFREALFSPVGGGFQSLQQMC-----NAINGRNPMIHVSTSYDATNDRMRSRRHDGNPA 757
Query: 80 ETDEQGQFYMTVDRIINGKELKAKL 104
+++ + QF + +DRI G++ + L
Sbjct: 758 QSENKRQFELDIDRIAKGEDSRTTL 782
>sp|P19963|ALL1_OLEEU Major pollen allergen Ole e 1 OS=Olea europaea PE=1 SV=2
Length = 145
Score = 35.0 bits (79), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 32 IHVGGQVLCQNCFKSYKEWVNGSNPLKGVTVSLTCMDDRSRAMCY-KSDETDEQGQFYMT 90
H+ GQV C C + + S + G ++ L C D + + + + T +G + M
Sbjct: 11 FHIQGQVYCDTCRAGFITEL--SEFIPGASLRLQCKDKENGDVTFTEVGYTRAEGLYSML 68
Query: 91 VDRIINGKELKAKLCSVRLVSSTHADCSIATNFAGGKTGVKL 132
V+R + K + C + L+SS DC+ K +K
Sbjct: 69 VER-----DHKNEFCEITLISSGRKDCNEIPTEGWAKPSLKF 105
>sp|P81412|DP2S_PYRFU DNA polymerase II small subunit OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=polB PE=3 SV=1
Length = 613
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 32 IHVGGQVLCQNCFKSYKEWVNGS 54
IHVG + C+N F + EW+NG+
Sbjct: 355 IHVGSKEFCENAFIKFLEWLNGN 377
>sp|O82015|LIGV1_LIGVU Major pollen allergen Lig v 1 OS=Ligustrum vulgare PE=1 SV=2
Length = 145
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 32 IHVGGQVLCQNCFKSYKEWVNGSNPLKGVTVSLTCMDDRSRAMCY-KSDETDEQGQFYMT 90
++ GQV C C + + S + G V L C D + + + + T +G + M
Sbjct: 11 FYIQGQVYCDTCRARFITEL--SEFIPGAGVRLQCKDGENGKVTFTEVGYTKAEGLYNML 68
Query: 91 VDRIINGKELKAKLCSVRLVSSTHADC 117
++R + K + C + L+SS+ DC
Sbjct: 69 IER-----DHKNEFCEITLISSSRKDC 90
>sp|Q73LG6|SECA_TREDE Protein translocase subunit SecA OS=Treponema denticola (strain
ATCC 35405 / CIP 103919 / DSM 14222) GN=secA PE=3 SV=1
Length = 922
Score = 31.6 bits (70), Expect = 2.6, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 19/112 (16%)
Query: 68 DDRSRAMCYKSDETDEQGQFYMTVDRIINGKELKAKLCSVRLV----------------- 110
+D+ A+C + E ++GQ + I EL +KL + R V
Sbjct: 439 NDKFEALCTEISEAYKRGQPVLVGTVSIEKSELISKLLTKRGVRHEVLNAKNHEREALII 498
Query: 111 --SSTHADCSIATNFAGGKTGVKLMRSPTSMFRDIIKYRVGPFYYTTPMCEK 160
+ +IATN AG T +KL SP + P YY + E+
Sbjct: 499 AEAGAKGSVTIATNMAGRGTDIKLGGSPEMRAKKRTGTNPNPDYYEKVLAEE 550
>sp|Q93YF5|SUVH1_TOBAC Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1
OS=Nicotiana tabacum GN=SUVH1 PE=1 SV=1
Length = 704
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 31 VIHVGGQVLCQNCFKSYKEWVNGSNPLKGVTVSLTCMDDRSRAMCYKSDETDEQGQFYMT 90
++ V GQ +KS ++W +G GV + S+ +C +D DE+G Y T
Sbjct: 410 LLRVPGQPEAFKVWKSIQQWKDGVASRVGVILPDLTSGAESQPVCLVNDVDDEKGPAYFT 469
>sp|Q10063|EHS1_SCHPO Calcium influx-promoting protein ehs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ehs1 PE=4 SV=1
Length = 486
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 10/96 (10%)
Query: 40 CQNCFKSYKEWVNGSNPLKGVTVSLTCMDDRSRAMCYKSDETDEQGQFYMTVDRIINGKE 99
C +C SYK W+ S V ++D S + YK+ ++ Y +D +I
Sbjct: 354 CSDCANSYKNWLCAS-----VIPRCADINDNSSYLIYKNYDSR-----YPLIDEVIQPGP 403
Query: 100 LKAKLCSVRLVSSTHADCSIATNFAGGKTGVKLMRS 135
K L L S + C + FA K G L S
Sbjct: 404 YKEVLPCSYLCYSLASSCPLDLGFACPKAGYGLEFS 439
>sp|Q9V2F3|DP2S_PYRAB DNA polymerase II small subunit OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=polB PE=3 SV=1
Length = 619
Score = 30.0 bits (66), Expect = 7.4, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 32 IHVGGQVLCQNCFKSYKEWVNG 53
IHVG + C+ F + EW+NG
Sbjct: 361 IHVGSREFCEKAFLKFLEWLNG 382
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,056,456
Number of Sequences: 539616
Number of extensions: 2555984
Number of successful extensions: 5354
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 5343
Number of HSP's gapped (non-prelim): 16
length of query: 176
length of database: 191,569,459
effective HSP length: 110
effective length of query: 66
effective length of database: 132,211,699
effective search space: 8725972134
effective search space used: 8725972134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)