Query 048603
Match_columns 305
No_of_seqs 151 out of 1515
Neff 8.5
Searched_HMMs 13730
Date Mon Mar 25 19:22:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048603.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048603hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jb0i_ f.23.17.1 (I:) Subunit 44.3 12 0.00087 20.1 3.0 24 3-26 8-31 (38)
2 d2heka1 a.211.1.1 (A:1-369) Hy 12.7 32 0.0024 28.1 1.4 17 23-39 78-94 (369)
3 d2o6ia1 a.211.1.1 (A:1-453) Hy 12.1 36 0.0026 29.3 1.4 16 23-38 104-119 (453)
4 d2bbya_ a.4.5.15 (A:) DNA-bind 8.7 12 0.0009 23.5 -2.2 24 279-302 21-44 (69)
5 d2hf5a1 a.39.1.5 (A:81-113) Tr 7.8 19 0.0013 19.0 -1.4 13 273-285 11-24 (33)
6 d2eppa1 g.37.1.1 (A:286-338) P 7.7 48 0.0035 18.8 0.4 9 27-35 23-31 (53)
7 d1kcfa1 a.140.2.1 (A:3-38) Mit 6.8 1.8E+02 0.013 14.6 2.4 30 25-54 5-34 (36)
8 d1k9xa_ d.92.1.5 (A:) Thermost 6.3 67 0.0049 27.9 0.7 46 21-66 259-319 (497)
9 d2i47a1 d.92.1.10 (A:220-473) 6.2 86 0.0063 23.9 1.3 16 22-37 179-194 (254)
10 d1my6a1 a.2.11.1 (A:1-88) Fe s 6.1 94 0.0068 19.9 1.3 18 53-70 16-33 (88)
No 1
>d1jb0i_ f.23.17.1 (I:) Subunit VIII of photosystem I reaction centre, PsaI {Synechococcus elongatus [TaxId: 32046]}
Probab=44.25 E-value=12 Score=20.15 Aligned_cols=24 Identities=29% Similarity=0.580 Sum_probs=15.9
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHH
Q 048603 3 SKAPWYLLPLAWAWTGTAVTGFFV 26 (305)
Q Consensus 3 ~~~~w~~~~~~~~~~G~~~~~l~~ 26 (305)
++.||.+.|+...++-....|+..
T Consensus 8 syLPwI~iPvv~wl~p~vvMglLF 31 (38)
T d1jb0i_ 8 SFLPWIFIPVVCWLMPTVVMGLLF 31 (38)
T ss_dssp TTHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HhcchhHHHHHHHHHHHHHHHHHh
Confidence 567999998855556665555543
No 2
>d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]}
Probab=12.73 E-value=32 Score=28.07 Aligned_cols=17 Identities=29% Similarity=0.383 Sum_probs=13.6
Q ss_pred HHHHHHHhhhCCCccCC
Q 048603 23 GFFVIGHDCAHKSFSKN 39 (305)
Q Consensus 23 ~l~~l~Hd~~H~~~~~~ 39 (305)
.+..|+||.||+.|+-.
T Consensus 78 ~~A~LlHDiGh~PFsH~ 94 (369)
T d2heka1 78 KLAGLLHDLGHPPFSHT 94 (369)
T ss_dssp HHHHHTTTTTCCSSSSC
T ss_pred HHHHHHhhcccchhhhh
Confidence 34468999999999854
No 3
>d2o6ia1 a.211.1.1 (A:1-453) Hypothetical protein EF1143 {Enterococcus faecalis [TaxId: 1351]}
Probab=12.06 E-value=36 Score=29.30 Aligned_cols=16 Identities=25% Similarity=0.322 Sum_probs=12.8
Q ss_pred HHHHHHHhhhCCCccC
Q 048603 23 GFFVIGHDCAHKSFSK 38 (305)
Q Consensus 23 ~l~~l~Hd~~H~~~~~ 38 (305)
.+..|.||-|||.|+-
T Consensus 104 ~~AaLlHDiGHgPfSH 119 (453)
T d2o6ia1 104 LCAALLHDVGHGPYSH 119 (453)
T ss_dssp HHHHHHTTTTCCTTHH
T ss_pred HHHHHHhccCcccccc
Confidence 3456899999999984
No 4
>d2bbya_ a.4.5.15 (A:) DNA-binding domain from rap30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.68 E-value=12 Score=23.48 Aligned_cols=24 Identities=25% Similarity=0.599 Sum_probs=18.8
Q ss_pred CEEEcCccCCCCCCchhhhhhcCC
Q 048603 279 NYVAFDQLAPKDSQPITFLKSVMP 302 (305)
Q Consensus 279 ~~~~f~~~~~~~~~~~~~~~~~~~ 302 (305)
.+-++++++.+.+||..+||.++-
T Consensus 21 ~ywsiK~L~~~t~QP~~yLKeiL~ 44 (69)
T d2bbya_ 21 QYYNLKDLVDITKQPVVYLKEILK 44 (69)
T ss_dssp SCBCHHHHHHHCCSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHhChHHHHHHHHH
Confidence 344678888888999999998753
No 5
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=7.80 E-value=19 Score=19.04 Aligned_cols=13 Identities=23% Similarity=0.751 Sum_probs=6.8
Q ss_pred EEeCCC-CEEEcCc
Q 048603 273 IYDKEQ-NYVAFDQ 285 (305)
Q Consensus 273 ~~d~~~-~~~~f~~ 285 (305)
++|.++ ++++..|
T Consensus 11 ~FDkDg~G~Is~~E 24 (33)
T d2hf5a1 11 VFDKDGNGYISAAE 24 (33)
T ss_dssp HHSSSCCSCBCHHH
T ss_pred HhCCCCCCcCcHHH
Confidence 455555 5554444
No 6
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.74 E-value=48 Score=18.82 Aligned_cols=9 Identities=22% Similarity=0.353 Sum_probs=7.0
Q ss_pred HHHhhhCCC
Q 048603 27 IGHDCAHKS 35 (305)
Q Consensus 27 l~Hd~~H~~ 35 (305)
-.|||.||.
T Consensus 23 r~HEAQHG~ 31 (53)
T d2eppa1 23 RQHEAQHGV 31 (53)
T ss_dssp HHHHHHHTT
T ss_pred hHhHHhcCc
Confidence 478888887
No 7
>d1kcfa1 a.140.2.1 (A:3-38) Mitochondrial resolvase ydc2 N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=6.80 E-value=1.8e+02 Score=14.62 Aligned_cols=30 Identities=13% Similarity=0.323 Sum_probs=23.5
Q ss_pred HHHHHhhhCCCccCCchhhHHHHHHHHhhh
Q 048603 25 FVIGHDCAHKSFSKNKLLEDIVGTLAFLPL 54 (305)
Q Consensus 25 ~~l~Hd~~H~~~~~~~~lN~~vg~l~~~~~ 54 (305)
-+++|-|-=..++++.+-++++..+...|+
T Consensus 5 sflqhickltglsrsgrkdellrrivdspi 34 (36)
T d1kcfa1 5 SFLQHICKLTGLSRSGRKDELLRRIVDSPI 34 (36)
T ss_dssp HHHHHHHHHTTCCCCSCTTHHHHHHHHCCC
T ss_pred HHHHHHHHhhcccccccHHHHHHHHhcCCC
Confidence 357898988889998887888887776554
No 8
>d1k9xa_ d.92.1.5 (A:) Thermostable carboxypeptidase 1 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=6.29 E-value=67 Score=27.90 Aligned_cols=46 Identities=7% Similarity=-0.023 Sum_probs=28.9
Q ss_pred HHHHHHHHHhhhCCCccCC---ch------------hhHHHHHHHHhhhhCChhhhhHHHh
Q 048603 21 VTGFFVIGHDCAHKSFSKN---KL------------LEDIVGTLAFLPLIYPYEPWRFKHD 66 (305)
Q Consensus 21 ~~~l~~l~Hd~~H~~~~~~---~~------------lN~~vg~l~~~~~~~~~~~wr~~H~ 66 (305)
+.+++.+.||+||+....+ .+ +=.-.+.+....+|.|-+.|+..--
T Consensus 259 ~~~l~s~iHE~GHalYEq~l~~~~~~~plg~~~s~giHESQSr~~En~vgrs~~F~~~~~p 319 (497)
T d1k9xa_ 259 RRTILSTVHEFGHALYELQQDERFMFTPIAGGVSLGIHESQSRFWENIIGRSKEFVELIYP 319 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGGTTSTTSSCSCHHHHHHHHHHHHTTTTTSHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHhCCCHhHccCCccCCCCcccccHHHHHHHHHHhcCHHHHHHHhh
Confidence 4578889999999986654 11 1133445555567777776665544
No 9
>d2i47a1 d.92.1.10 (A:220-473) TNF-alpha converting enzyme, TACE, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.19 E-value=86 Score=23.88 Aligned_cols=16 Identities=19% Similarity=0.152 Sum_probs=10.9
Q ss_pred HHHHHHHHhhhCCCcc
Q 048603 22 TGFFVIGHDCAHKSFS 37 (305)
Q Consensus 22 ~~l~~l~Hd~~H~~~~ 37 (305)
...++++||.||.--.
T Consensus 179 ~~~~~~AHElGH~lG~ 194 (254)
T d2i47a1 179 EADLVTTHELGHNFGA 194 (254)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhcCC
Confidence 3455789998886543
No 10
>d1my6a1 a.2.11.1 (A:1-88) Fe superoxide dismutase (FeSOD) {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=6.14 E-value=94 Score=19.86 Aligned_cols=18 Identities=28% Similarity=0.416 Sum_probs=14.5
Q ss_pred hhhCChhhhhHHHhhhcc
Q 048603 53 PLIYPYEPWRFKHDKHHA 70 (305)
Q Consensus 53 ~~~~~~~~wr~~H~~HH~ 70 (305)
|.+++-+..+..|.+||.
T Consensus 16 P~~Is~~tm~~Hh~kHH~ 33 (88)
T d1my6a1 16 PYGMSAKTLEFHYGKHHK 33 (88)
T ss_dssp GGTCCHHHHHHHHHTHHH
T ss_pred ccccCHHHHHHHHHHHHH
Confidence 445777889999999887
Done!