BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048606
(276 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81025|P2A03_ARATH Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana
GN=PP2A3 PE=4 SV=1
Length = 463
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 109/173 (63%), Gaps = 8/173 (4%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
R S+EEE+ V+ LQ +FG +I DY IVVFTGGDDLE++++TL+DY CP+ L ++L+
Sbjct: 101 GRISKEEESTVNTLQCIFGSQILDYCIVVFTGGDDLEEDDQTLDDYFRAGCPEFLTKVLR 160
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFFAELKVES------ 114
LC R VLFDNK+K + K+ EQV+QLL+ V V + GG PYT + ++K E+
Sbjct: 161 LCGGRKVLFDNKSKDEKKKVEQVKQLLARVENVGEQTGGIPYTYQLHRKIKEENDERLRE 220
Query: 115 --KLKETTTKLEQQLAEEQAARLKGEEAAQLAQRKSNDEIRKLKENLKRAQRE 165
++ E+ + E +LAE Q L +E Q+ + K+ I + + N K ++E
Sbjct: 221 EERVIESKNRAEAELAEMQQNLLMEKEKLQMEEAKNKQLIAQAEANEKLMEQE 273
>sp|P54120|AIG1_ARATH Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1
Length = 353
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 103/190 (54%), Gaps = 29/190 (15%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
+R SQEEE + LQ LFG KI DY+IVVFTGGD LED+ TLEDYLG P LK +L
Sbjct: 138 TRISQEEEMVLSTLQVLFGSKIVDYLIVVFTGGDVLEDDGMTLEDYLGDNMPDFLKRVLI 197
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFFAELKVESKLKETT 120
LC R +LFDNKTK K+T+QV +LL L++ V +N PYT+E + +K E+
Sbjct: 198 LCGQRMILFDNKTKDDEKKTKQVHELLKLIDLVRKQNNNIPYTDEMYHMIKEEN------ 251
Query: 121 TKLEQQLAEEQAARLKGEEAAQLAQRKSNDEIRKLKENLKRAQREIEDQMHESNEYQIKR 180
E+ E++ KG QLA + ++ NE +K
Sbjct: 252 ---ERHKKEQEELESKGHSEEQLAA--------------------LMKELQIMNERNLKA 288
Query: 181 ITEMVESNLK 190
+ EM+E N+K
Sbjct: 289 MAEMMEKNMK 298
>sp|Q8WWP7|GIMA1_HUMAN GTPase IMAP family member 1 OS=Homo sapiens GN=GIMAP1 PE=1 SV=1
Length = 306
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
RF+ +++ AV ++ +FG+ + +M++VFT +DL +L DY+ + L+E++
Sbjct: 122 GRFTAQDQQAVRQVRDMFGEDVLKWMVIVFTRKEDLAGG--SLHDYVSNTENRALRELVA 179
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFFAELKVESKLKETT 120
C R FDN+ + ++ QV+QLL +V + +++ G Y+NE + EL +
Sbjct: 180 ECGGRVCAFDNRATGR-EQEAQVEQLLGMVEGLVLEHKGAHYSNEVY-ELAQVLRWAGPE 237
Query: 121 TKLEQQLAEEQAARLK 136
+L +++AE AAR++
Sbjct: 238 ERL-RRVAERVAARVQ 252
>sp|Q75N62|GIMA8_MOUSE GTPase IMAP family member 8 OS=Mus musculus GN=Gimap8 PE=2 SV=1
Length = 688
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
RF+QE+E V L+ F + I YMIV+FT +DL D + L DY K LK+ILK
Sbjct: 572 GRFTQEDEVVVEQLEASFEENIMKYMIVLFTRKEDLGDGD--LHDYTNNTKNKALKKILK 629
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFFAELK 111
C+ R F+NK + + T QV+ LL + N+ +K ++N + +LK
Sbjct: 630 KCNGRVCAFNNKETGEDQET-QVKGLLKIANS--LKKNYDEHSNSWVGQLK 677
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 3 FSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK-L 61
+++E+ + + G K + +MIVVFT D+L+ E +L +Y +E + LKE++K +
Sbjct: 144 YTEEDRETIEGIWGKIGPKAYRHMIVVFTREDELD--EDSLWNY--IESKESLKELIKNI 199
Query: 62 CDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFFAELKVES 114
RC F+NK K +R QV +LL + + +++ +PY F LK+ES
Sbjct: 200 GSRRCCTFNNKADKK-QRELQVFKLLDAIELLMMES-PEPY----FEPLKMES 246
>sp|Q8ND71|GIMA8_HUMAN GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=1 SV=2
Length = 665
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
RF++E++ AV L+ +FG Y I++FT +DL LED++ K L+ I K
Sbjct: 535 GRFTEEDKTAVAKLEAIFGADFTKYAIMLFTRKEDL--GAGNLEDFMKNSDNKALRRIFK 592
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNG--GQPYTNEFFAEL 110
C R F+NK + + T QV+ LL+ VN + ++G G P+T E ++L
Sbjct: 593 KCGRRVCAFNNKETGQAQET-QVKALLTKVNDLRKESGWSGYPHTQENVSKL 643
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 3 FSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILKLC 62
F++E+E +Q +FG + ++I+VFT +D+ +E KPLK++++
Sbjct: 106 FTREDEETAKGIQQVFGAEARRHIIIVFT----RKDDLGDDLLQDFIEKNKPLKQLVQDY 161
Query: 63 DHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEF 106
+ R +F+NKT K ++ QV +LL V ++ NGG PY F
Sbjct: 162 EGRYCIFNNKTNSKDEQITQVLELLRKVESLVNTNGG-PYHVNF 204
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 3 FSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILKLC 62
+++ +EA + +Q FG+K F+YMI++ T +DL D + L+ +L K L +++ C
Sbjct: 336 YTKNDEAVLSTIQNNFGEKFFEYMIILLTRKEDLGDQD--LDTFL-RNSNKALYGLIQKC 392
Query: 63 DHRCVLFD 70
+R F+
Sbjct: 393 KNRYSAFN 400
>sp|Q4KLG2|GIMA8_RAT GTPase IMAP family member 8 OS=Rattus norvegicus GN=Gimap8 PE=2
SV=1
Length = 688
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
RF+QE+EA V L+ F + I YMIV+FT +DL D + L D+ K LK I K
Sbjct: 572 GRFTQEDEAVVEQLEASFEENIMKYMIVLFTRKEDLGDGD--LYDFTNNTKNKVLKRIFK 629
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVN 91
C R F+NK + + T QV+ LL++ N
Sbjct: 630 KCKGRVCAFNNKETGEDQET-QVKALLTIAN 659
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 4 SQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEIL-KLC 62
++E++ + +Q +FG + + +MIVVFT D+L E TL+++ +E K LK+++ +
Sbjct: 144 TEEDKKTIEGIQGVFGPQAYRHMIVVFTREDEL--GEDTLQNH--IESKKYLKKLIENIG 199
Query: 63 DHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFFAELKVES 114
RC F+NK K ++ QV Q L + + +++ G +F LK E+
Sbjct: 200 SQRCCAFNNKADKK-QQELQVSQFLDAIEFLMMESPG-----TYFEPLKTEN 245
>sp|Q8NHV1|GIMA7_HUMAN GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1
Length = 300
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
R+++EE+ V ++ +FGK +M+++FT ++LE ++ D++ + LK I+K
Sbjct: 102 GRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEG--QSFHDFIA-DADVGLKSIVK 158
Query: 61 LCDHRCVLFDNKTK-YKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFF 107
C +RC F N K K ++ QVQ+L+ L+ + N G ++++ +
Sbjct: 159 ECGNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIY 206
>sp|Q8K3K9|GIMA4_RAT GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2
SV=1
Length = 310
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
Query: 3 FSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILKLC 62
++ EE A L ++F KK +MI++ T DDLED + + +YL P+ L+E++
Sbjct: 126 YTVEEHKATRKLLSMFEKKARRFMILLLTRKDDLEDTD--IHEYLE-TAPEVLQELIYEF 182
Query: 63 DHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFF 107
+R LF+NK ++ EQ +QLL+LV ++ +NGG+ +TN+ +
Sbjct: 183 RNRYCLFNNKAS-GAEQEEQKRQLLTLVQSMVRENGGKYFTNKMY 226
>sp|P70224|GIMA1_MOUSE GTPase IMAP family member 1 OS=Mus musculus GN=Gimap1 PE=1 SV=3
Length = 277
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
RF+ ++ A+ ++ LFGK++ +VVFT +DL + +L+DY+ + L++++
Sbjct: 98 GRFTMQDSQALAAVKRLFGKQVMARTVVVFTRQEDLAGD--SLQDYVHCTDNRALRDLVA 155
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFF 107
C R +N+ +R Q +QLL +V + ++GG Y+NE +
Sbjct: 156 ECGGRVCALNNRATGS-EREAQAEQLLGMVACLVREHGGAHYSNEVY 201
>sp|Q9NUV9|GIMA4_HUMAN GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1
Length = 329
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
R+++EE A + +FG++ +MI++FT DDL D L DYL E P+ +++++
Sbjct: 124 GRYTEEEHKATEKILKMFGERARSFMILIFTRKDDLGDT--NLHDYL-REAPEDIQDLMD 180
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFF 107
+ R +NK ++ Q QLL L+ V +N YTN +
Sbjct: 181 IFGDRYCALNNKAT-GAEQEAQRAQLLGLIQRVVRENKEGCYTNRMY 226
>sp|Q8BWF2|GIMA5_MOUSE GTPase IMAP family member 5 OS=Mus musculus GN=Gimap5 PE=2 SV=1
Length = 308
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
RF+ E+ AV ++ +FG + +MIV+FT +DLE EK+LE+++ + L+ + +
Sbjct: 120 GRFTAEDAMAVRMVKEVFGVGVMRHMIVLFTRKEDLE--EKSLEEFVTHTDNRSLRSLTQ 177
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFFAELKVESKLKE 118
C R F+N+ + ++ Q+ +L++LV + + G ++N+ F L E+ L+E
Sbjct: 178 ECGRRYCAFNNRASGE-EQQGQLAELMALVRRLEQECEGSFHSNDLF--LHAEALLRE 232
>sp|Q99MI6|GIMA3_MOUSE GTPase IMAP family member 3 OS=Mus musculus GN=Gimap3 PE=1 SV=2
Length = 301
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
RF+ E+ AV ++ +FG + +MIV+FT +DL EK+LE+++ + L+ +++
Sbjct: 116 GRFTAEDVMAVRMVKEVFGVGVMRHMIVLFTRKEDLA--EKSLEEFVTHTDNRSLRSLVQ 173
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFFAELKVESKLKE 118
C R F+N+ + ++ Q+ +L++LV + + G ++N+ F L E+ L+E
Sbjct: 174 ECGRRYCAFNNRASGE-EQQGQLAELMALVRRLEQECEGSFHSNDLF--LHAETLLRE 228
>sp|Q8K3L6|GIMA5_RAT GTPase IMAP family member 5 OS=Rattus norvegicus GN=Gimap5 PE=2
SV=1
Length = 326
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
R++ E+ AV ++ +FG + YMIV+FT +DL D ++LE+++ L +++
Sbjct: 138 GRYTVEDAMAVRMVKQIFGVGVMRYMIVLFTHKEDLAD--ESLEEFVTHTGNLDLHRLVQ 195
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFFAELKV 112
C R F+NK + ++ Q+ +L++LV + ++ G ++N+ F +V
Sbjct: 196 ECGRRYCAFNNKASGE-EQQGQLAELMALVRRLEQEHEGSFHSNDLFVYTQV 246
>sp|Q8K349|GIMA6_MOUSE GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1
Length = 305
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
R++ E++A LQ +FG I Y I+VFT +DL E +LE+Y+ K L +
Sbjct: 195 GRYTAEDQAVARCLQEIFGNTILAYTILVFTRKEDLA--EGSLEEYIQENNNKSLDVLDV 252
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEF 106
C+ R F+NK + ++ Q+++L+ V + +N G YT EF
Sbjct: 253 ACERRHCGFNNKAQGD-EQEAQLKKLMEEVELILWENEGHCYTMEF 297
>sp|Q6P9H5|GIMA6_HUMAN GTPase IMAP family member 6 OS=Homo sapiens GN=GIMAP6 PE=2 SV=1
Length = 292
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
RF+ E++ V LQ +FG + + I+VFT +DL +LEDY+ + L +
Sbjct: 133 GRFTDEDQQVVRRLQEVFGVGVLGHTILVFTRKEDLAGG--SLEDYVRETNNQALAWLDV 190
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFFAELKVESKLKETT 120
R F+N+ + + ++ Q+++L+ V A+ +N G Y+N+ + + +LKE
Sbjct: 191 TLARRHCGFNNRAQGE-EQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQ 249
Query: 121 TKLEQQLAEEQAAR-LKGEEA 140
E+Q+++ Q + + GEE+
Sbjct: 250 ---ERQVSQGQGSEDVPGEES 267
>sp|Q99JY3|GIMA4_MOUSE GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=1 SV=1
Length = 219
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
R++ EE A + +FGK+ +MI++ T DDLED + + +YL + PK +E++
Sbjct: 124 GRYTVEEHKATQKILDMFGKQARRFMILLLTRKDDLEDTD--IHEYLE-KAPKFFQEVMH 180
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAV 93
+R LF+N+ ++ EQ QLL+LV ++
Sbjct: 181 EFQNRYCLFNNRAS-GAEKEEQKMQLLTLVQSM 212
>sp|Q5FVN6|GIMA6_RAT GTPase IMAP family member 6 OS=Rattus norvegicus GN=Gimap6 PE=2
SV=1
Length = 304
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
R++ E++ A LQ +FG I Y I+VFT ++L E +LE+Y+ K L +
Sbjct: 194 GRYTTEDQEAARCLQEIFGNGILAYTILVFTRKEELA--EGSLEEYIKENNNKTLDALDV 251
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEF 106
C+ R F+N+ + ++ Q+Q+L+ + ++ +N G YT E
Sbjct: 252 ACERRHCGFNNRAQGD-EQEAQLQKLMEEIESILWENEGHCYTMEL 296
>sp|Q9UG22|GIMA2_HUMAN GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=1 SV=2
Length = 337
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
R++ +++ A ++ +FG+ + IV+FT +DL N +L DY+ K L +++
Sbjct: 116 GRYTSQDQQAAQRVKEIFGEDAMGHTIVLFTHKEDL--NGGSLMDYMHDSDNKALSKLVA 173
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFFA 108
C R F+N+ + + +QV++L+ + + ++ G YTN ++
Sbjct: 174 ACGGRICAFNNRAE-GSNQDDQVKELMDCIEDLLMEKNGDHYTNGLYS 220
>sp|Q96F15|GIMA5_HUMAN GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=1 SV=1
Length = 307
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILK 60
RF+ ++ A+ ++ +FG +++++FT +DL + L+DY+ LK++++
Sbjct: 121 GRFTAQDTVAIRKVKEVFGTGAMRHVVILFTHKEDL--GGQALDDYVANTDNCSLKDLVR 178
Query: 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNGGQPYTNEFF 107
C+ R F+N + +R +Q +LL+++ + + G ++N+ F
Sbjct: 179 ECERRYCAFNNWGSVEEQRQQQA-ELLAVIERLGREREGSFHSNDLF 224
>sp|A2R7P5|NST1_ASPNC Stress response protein nst1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=nst1 PE=3 SV=1
Length = 1201
Score = 41.2 bits (95), Expect = 0.009, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 116 LKETTTKLEQQLAEEQAARLKGEEAAQLAQRKSNDEIRKLKENLKRAQREIEDQMHESNE 175
L+E K E+Q + +A R K +EA +L RK ++ ++L+E +R Q EIE + E E
Sbjct: 591 LEEQRRKREEQKKKREAER-KAQEAERL--RKEAEKQKRLREERER-QAEIERKQREQKE 646
Query: 176 YQIKRITEMVESNLKETTTRLEQQ 199
+ KR E ++ L+E T+ E++
Sbjct: 647 LEKKRREEARQNELREKKTKDERE 670
>sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1
Length = 35213
Score = 37.7 bits (86), Expect = 0.097, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 30/167 (17%)
Query: 126 QLAEEQAARLKGEEAAQLAQRKSNDEIRKLKEN-LKRAQREI----EDQMHESNEYQIKR 180
Q A+EQA + EA + A K K KE LK RE+ ++Q H S+E QI++
Sbjct: 460 QPAQEQARK----EAEKTAVTKVVVAADKAKEQELKSRTREVMVTTQEQTHISHE-QIRK 514
Query: 181 ITE------MVESNLK----------ETTTRLEQQLAEEQVARLKGEEVAQVAQRKSNDK 224
TE +V S K E TT+ EQ+ ++ R + EE+A + K
Sbjct: 515 ETEKAFVPKVVISATKAKEQETRITGEITTKQEQKRITQETIRQETEEIAASMVVVATAK 574
Query: 225 IHKLRDNLESAQRET---EDQMHESYEDQIKRITEVVFFMLLLLTSK 268
KL + Q ET +DQMH ++E +K + V +++ T K
Sbjct: 575 STKLEAAV-GVQEETAIQQDQMHLTHEQMMKETRKTVVPKVIVATPK 620
>sp|Q2SRX4|TIG_MYCCT Trigger factor OS=Mycoplasma capricolum subsp. capricolum (strain
California kid / ATCC 27343 / NCTC 10154) GN=tig PE=3
SV=1
Length = 428
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 153 RKLKENLKRAQREIEDQMHESNEYQIKRITEMVESNLKETTTRLEQQLAEEQVARLKGEE 212
+K K N I D++ +++E+QI + +VE LK+ E QL ++++ K +E
Sbjct: 282 QKTKNNKSEFVENIIDEIIKTSEFQIPKT--IVERQLKDVKKEFEDQLTQQKITLEKYKE 339
Query: 213 VAQVAQRK-----SNDKIHKLRDNLESAQRETEDQMHESYE 248
+ +++Q + ND IH+++ L ++ + ++ + S E
Sbjct: 340 ITKISQEEIDEELKNDAIHRIKSFLVVSEIKNKENIKASEE 380
>sp|Q72AW6|CLPB_DESVH Chaperone protein ClpB OS=Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpB PE=3
SV=1
Length = 865
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 27/159 (16%)
Query: 117 KETTTKLEQQLAEEQAARLKGEEAAQLAQ----RKSNDEIRKLKENLKRAQREIEDQMHE 172
+E +LE +LA+ L+ E+ A L+Q + S D +R +KE+++R + IE+
Sbjct: 443 RERLERLENELAD-----LRAEQTALLSQWEREKGSIDHVRSIKEDIERTRHAIEEA--- 494
Query: 173 SNEYQIKRITEMVESNLKETTTRLEQ---------QLAEEQVARLKGEEVAQVAQRKSND 223
Y + R E+ S L E +LE +L +E+V + +++A++ R +
Sbjct: 495 ERAYDLNRAAELKYSRLLELERQLESAEKGGHDETRLLKEEV---RPDDIAEIVARWTGI 551
Query: 224 KIHKLRDNLESAQRETEDQMHE---SYEDQIKRITEVVF 259
+ +L ++ D +HE E+ + ++E V
Sbjct: 552 PVTRLLESEREKLLRLADVLHERVVGQEEAVDAVSEAVL 590
>sp|Q6MTF5|TIG_MYCMS Trigger factor OS=Mycoplasma mycoides subsp. mycoides SC (strain
PG1) GN=tig PE=3 SV=1
Length = 428
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 107 FAELKVESKLKETTTKLEQQLAEEQAARLKGEEAAQLAQRKSNDEIRKLKENLKRAQREI 166
F E ++ +K + ++ + + E Q +K E QLAQ+K + K KE K Q EI
Sbjct: 291 FVENIIDEIIKTSEFQIPKTIIERQIKDVKKEFEDQLAQQKIT--LDKYKEITKITQEEI 348
Query: 167 EDQMHESNEYQIKRITEMVESNLKETTTRLEQQLAEEQVARLKGEEVAQVAQRKSNDKIH 226
++++ ++IK +V S +K E +A E+ K EE A + ++ DKI
Sbjct: 349 DEELKSDAIHRIKSF--LVASEIKNK----ENIVASEEAINAKFEEFANLYGIEA-DKIK 401
Query: 227 KLRDNLESAQRETEDQMHESY 247
L DN ++ + + E ++ E++
Sbjct: 402 SLIDN-QAIKHQVESELLETF 421
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.344
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,933,280
Number of Sequences: 539616
Number of extensions: 3698343
Number of successful extensions: 27994
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 2392
Number of HSP's that attempted gapping in prelim test: 22353
Number of HSP's gapped (non-prelim): 6180
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)