Query 048606
Match_columns 276
No_of_seqs 184 out of 674
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 19:24:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048606.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048606hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lxw_A GTPase IMAP family memb 99.8 1.6E-18 5.5E-23 153.2 11.0 109 1-112 116-224 (247)
2 3lxx_A GTPase IMAP family memb 99.6 6.3E-16 2.2E-20 133.9 7.9 109 1-113 123-231 (239)
3 2xtp_A GTPase IMAP family memb 98.9 1.1E-08 3.8E-13 89.1 12.1 108 2-112 117-224 (260)
4 3def_A T7I23.11 protein; chlor 97.1 0.00065 2.2E-08 59.6 5.8 93 2-95 130-242 (262)
5 1h65_A Chloroplast outer envel 96.9 0.004 1.4E-07 54.7 9.1 107 2-110 133-260 (270)
6 1f5n_A Interferon-induced guan 82.4 35 0.0012 34.1 15.4 66 167-238 517-582 (592)
7 3pqc_A Probable GTP-binding pr 62.6 37 0.0013 26.3 8.2 32 63-96 133-164 (195)
8 4dhe_A Probable GTP-binding pr 57.8 36 0.0012 27.4 7.5 13 82-94 197-209 (223)
9 3ibs_A Conserved hypothetical 57.5 38 0.0013 27.4 7.7 27 10-36 97-124 (218)
10 1f5n_A Interferon-induced guan 51.5 89 0.003 31.2 10.5 33 169-201 534-566 (592)
11 3t5d_A Septin-7; GTP-binding p 49.0 9.3 0.00032 33.1 2.7 72 3-93 130-201 (274)
12 1w0t_A Telomeric repeat bindin 42.1 20 0.00068 24.0 2.9 23 1-23 3-25 (53)
13 2hl0_A Threonyl-tRNA synthetas 40.4 48 0.0016 27.7 5.6 77 19-98 31-109 (143)
14 1go4_E MAD1 (mitotic arrest de 37.0 22 0.00074 28.1 2.8 47 221-276 10-61 (100)
15 1gvd_A MYB proto-oncogene prot 34.4 31 0.001 22.9 2.9 21 1-21 4-24 (52)
16 2llk_A Cyclin-D-binding MYB-li 33.8 28 0.00095 25.6 2.8 21 1-21 24-44 (73)
17 1svi_A GTP-binding protein YSX 33.7 1.6E+02 0.0054 22.7 7.6 32 61-94 132-163 (195)
18 3cve_A Homer protein homolog 1 33.6 1.3E+02 0.0046 22.2 6.5 44 187-230 17-60 (72)
19 1guu_A C-MYB, MYB proto-oncoge 33.6 31 0.0011 22.8 2.8 21 1-21 4-24 (52)
20 3cvf_A Homer-3, homer protein 33.1 1.3E+02 0.0045 22.6 6.5 44 187-230 23-66 (79)
21 3mq9_A Bone marrow stromal ant 30.4 3.1E+02 0.011 25.3 10.1 28 188-215 394-421 (471)
22 3sjm_A Telomeric repeat-bindin 29.9 39 0.0013 23.9 2.9 24 1-24 12-35 (64)
23 2d9a_A B-MYB, MYB-related prot 29.7 39 0.0013 23.0 2.9 21 1-21 9-29 (60)
24 2cu7_A KIAA1915 protein; nucle 29.2 39 0.0013 24.1 2.9 21 1-21 10-30 (72)
25 3c3g_A Alpha/beta peptide with 28.6 92 0.0031 20.0 4.1 27 178-210 2-28 (33)
26 1ity_A TRF1; helix-turn-helix, 28.6 39 0.0013 23.8 2.8 23 1-23 11-33 (69)
27 3c3f_A Alpha/beta peptide with 25.8 1.1E+02 0.0038 19.7 4.1 27 178-210 3-29 (34)
28 3iev_A GTP-binding protein ERA 25.0 1.3E+02 0.0044 26.5 6.2 84 3-105 106-190 (308)
29 3vp9_A General transcriptional 24.8 2.4E+02 0.0082 21.8 8.3 47 172-234 39-86 (92)
30 2din_A Cell division cycle 5-l 24.3 53 0.0018 22.8 2.8 22 1-22 10-31 (66)
31 3o0z_A RHO-associated protein 24.2 1.1E+02 0.0038 26.1 5.2 51 190-241 5-55 (168)
32 2bni_A General control protein 23.3 89 0.003 20.2 3.4 27 177-209 2-28 (34)
33 2jvf_A De novo protein M7; tet 23.1 1.6E+02 0.0054 22.3 5.3 40 55-98 38-77 (96)
34 2j1l_A RHO-related GTP-binding 22.3 1.6E+02 0.0054 23.7 5.7 68 25-100 140-213 (214)
35 2eqb_B RAB guanine nucleotide 21.9 2.8E+02 0.0097 21.6 7.6 25 191-215 26-50 (97)
36 2dim_A Cell division cycle 5-l 21.9 62 0.0021 22.7 2.8 21 1-21 10-30 (70)
37 1eyq_A Chalcone-flavonone isom 21.7 72 0.0025 27.8 3.7 32 1-32 122-154 (222)
38 1x41_A Transcriptional adaptor 21.5 58 0.002 22.3 2.5 21 1-21 9-29 (60)
39 1gv2_A C-MYB, MYB proto-oncoge 21.4 63 0.0021 24.2 2.9 21 1-21 5-25 (105)
40 3zqc_A MYB3; transcription-DNA 21.4 60 0.0021 25.5 2.9 25 1-25 3-27 (131)
41 2k9n_A MYB24; R2R3 domain, DNA 20.7 61 0.0021 24.6 2.7 20 1-20 2-21 (107)
42 2l82_A Designed protein OR32; 20.6 2.3E+02 0.0078 23.1 6.2 51 41-99 90-154 (162)
43 2oxj_A Hybrid alpha/beta pepti 20.6 1.2E+02 0.0041 19.6 3.5 26 178-209 3-28 (34)
44 2wq1_A General control protein 20.4 1.6E+02 0.0056 18.8 4.1 15 178-192 2-16 (33)
45 3zzp_A TS9, ribosomal protein 20.2 85 0.0029 23.1 3.3 20 80-99 58-77 (77)
No 1
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=99.76 E-value=1.6e-18 Score=153.19 Aligned_cols=109 Identities=30% Similarity=0.640 Sum_probs=99.1
Q ss_pred CCCcHHHHHHHHHHHHHhchhhcceeEEEEecCCCCCCchhcHHHHhccCCCchHHHHHHHcCCceEEEecCCcCcccch
Q 048606 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILKLCDHRCVLFDNKTKYKVKRT 80 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~a~kytIVLFT~gDeLe~~~~tlEdyL~~~~~~~LqeLIekCGgRyhvFNNK~~~~~~q~ 80 (276)
++||..+..+++.+..+||+.++++.|||||++++|.+ .++++|+....+..|+++++.||+|||+|||++.+. .+.
T Consensus 116 ~~~~~~~~~~~~~l~~~~~~~~~~~~iilv~nK~Dl~~--~~~~~~l~~~~~~~l~~l~~~~g~~~~~~~~~~~~~-~~~ 192 (247)
T 3lxw_A 116 GRFTAQDQQAVRQVRDMFGEDVLKWMVIVFTRKEDLAG--GSLHDYVSNTENRALRELVAECGGRVCAFDNRATGR-EQE 192 (247)
T ss_dssp TBCCHHHHHHHHHHHHHHCGGGGGGEEEEEECGGGGTT--CCHHHHHHHCCCHHHHHHHHHTTTCEEECCTTCCHH-HHH
T ss_pred CCCCHHHHHHHHHHHHHhChhhhccEEEEEEchHhcCC--CCHHHHHhhcccHHHHHHHHHcCCeEEEEeCCCCcc-ccH
Confidence 46899999999999999999999999999999999987 789999985456889999999999999999997642 346
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCChHHHHHHHh
Q 048606 81 EQVQQLLSLVNAVNVKNGGQPYTNEFFAELKV 112 (276)
Q Consensus 81 ~QV~ELL~kIe~mV~eNgG~~YTnemf~eae~ 112 (276)
.||.+||.+|+.|+..|||.||+++||+.++.
T Consensus 193 ~~v~~Ll~~i~~~~~~~~~~~y~~~~~~~~~~ 224 (247)
T 3lxw_A 193 AQVEQLLGMVEGLVLEHKGAHYSNEVYELAQV 224 (247)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHH
Confidence 89999999999999999999999999999973
No 2
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=99.62 E-value=6.3e-16 Score=133.88 Aligned_cols=109 Identities=31% Similarity=0.571 Sum_probs=78.9
Q ss_pred CCCcHHHHHHHHHHHHHhchhhcceeEEEEecCCCCCCchhcHHHHhccCCCchHHHHHHHcCCceEEEecCCcCcccch
Q 048606 1 SRFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILKLCDHRCVLFDNKTKYKVKRT 80 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~a~kytIVLFT~gDeLe~~~~tlEdyL~~~~~~~LqeLIekCGgRyhvFNNK~~~~~~q~ 80 (276)
+++|..+...+..+...||..+..++|||||+.|.+.+ .++++|+. ..+..|+++++.||+|||+|+|++++. ...
T Consensus 123 ~~~~~~~~~~l~~~~~~~~~~~~~~~iiv~nK~D~~~~--~~~~~~i~-~~~~~l~~l~~~~~~~~~~~~~~~~~~-~~~ 198 (239)
T 3lxx_A 123 GRYTEEEHKATEKILKMFGERARSFMILIFTRKDDLGD--TNLHDYLR-EAPEDIQDLMDIFGDRYCALNNKATGA-EQE 198 (239)
T ss_dssp TCCSSHHHHHHHHHHHHHHHHHGGGEEEEEECGGGC---------------CHHHHHHHHHHSSSEEECCTTCCHH-HHH
T ss_pred CCCCHHHHHHHHHHHHHhhhhccceEEEEEeCCccCCc--ccHHHHHH-hchHHHHHHHHHcCCEEEEEECCCCcc-ccH
Confidence 46888999999999999999999999999999999887 78999998 367789999999999999999997543 346
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCChHHHHHHHhh
Q 048606 81 EQVQQLLSLVNAVNVKNGGQPYTNEFFAELKVE 113 (276)
Q Consensus 81 ~QV~ELL~kIe~mV~eNgG~~YTnemf~eae~e 113 (276)
.||.+||.+|+.|+..|||.||++.+|..+++.
T Consensus 199 ~~v~~ll~~i~~~~~~~~g~~~~~~~~~~~e~~ 231 (239)
T 3lxx_A 199 AQRAQLLGLIQRVVRENKEGCYTNRMYQRAEEE 231 (239)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCC-----------
T ss_pred HHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHH
Confidence 899999999999999999999999999999844
No 3
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=98.91 E-value=1.1e-08 Score=89.09 Aligned_cols=108 Identities=24% Similarity=0.522 Sum_probs=89.9
Q ss_pred CCcHHHHHHHHHHHHHhchhhcceeEEEEecCCCCCCchhcHHHHhccCCCchHHHHHHHcCCceEEEecCCcCcccchh
Q 048606 2 RFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILKLCDHRCVLFDNKTKYKVKRTE 81 (276)
Q Consensus 2 RFTeEE~~ale~Iq~lFG~~a~kytIVLFT~gDeLe~~~~tlEdyL~~~~~~~LqeLIekCGgRyhvFNNK~~~~~~q~~ 81 (276)
+|+..+...+..+..+||..+....|||||++.|+.+ .++.+|+....+..++.++..|+.||+.|++-..+ +....
T Consensus 117 ~~~~~~~~~~~~l~~~~~~~~~~~~i~vv~nK~Dl~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~S-A~~~~ 193 (260)
T 2xtp_A 117 RYTSQDQQAAQRVKEIFGEDAMGHTIVLFTHKEDLNG--GSLMDYMHDSDNKALSKLVAACGGRICAFNNRAEG-SNQDD 193 (260)
T ss_dssp CCCHHHHHHHHHHHHHHCGGGGGGEEEEEECGGGGTT--CCHHHHHHHCCCHHHHHHHHHTTTCEEECCTTCCH-HHHHH
T ss_pred CCCHHHHHHHHHHHHHhCchhhccEEEEEEcccccCC--ccHHHHHHhcchHHHHHHHHHhCCeEEEecCcccc-cccHH
Confidence 5788889999999999999988999999998877875 57999997545567999999999999989883221 13357
Q ss_pred HHHHHHHHHHHHHHHcCCCCCChHHHHHHHh
Q 048606 82 QVQQLLSLVNAVNVKNGGQPYTNEFFAELKV 112 (276)
Q Consensus 82 QV~ELL~kIe~mV~eNgG~~YTnemf~eae~ 112 (276)
+|.+|+..|..++..++|.+|++.++.....
T Consensus 194 gv~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T 2xtp_A 194 QVKELMDCIEDLLMEKNGDHYTNGLYSLIQR 224 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCCCHHHHHC--
T ss_pred HHHHHHHHHHHHHHhCCCCcCCHHHHHHHHH
Confidence 9999999999999999999999998877763
No 4
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=97.08 E-value=0.00065 Score=59.64 Aligned_cols=93 Identities=15% Similarity=0.215 Sum_probs=70.3
Q ss_pred CCcHHHHHHHHHHHHHhchhhcceeEEEEecCCCCCCchhcHHHHhccCCCchHHHHHHHcC-----------CceEEEe
Q 048606 2 RFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILKLCD-----------HRCVLFD 70 (276)
Q Consensus 2 RFTeEE~~ale~Iq~lFG~~a~kytIVLFT~gDeLe~~~~tlEdyL~~~~~~~LqeLIekCG-----------gRyhvFN 70 (276)
+|+..+...+..|...||..+++++|||+|..|....++.++++|+.. ....|++++..|. ..+++++
T Consensus 130 ~~~~~~~~~~~~l~~~~~~~~~~~~ivv~nK~Dl~~~~~~~~e~~~~~-~~~~l~~~i~~~~~~~~~~~~~~~~pv~~ve 208 (262)
T 3def_A 130 AVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDELSYETFSSK-RSDSLLKTIRAGSKMRKQEFEDSAIAVVYAE 208 (262)
T ss_dssp CCCHHHHHHHHHHHHHHCGGGGGGEEEEEECTTCCCSTTCCHHHHHHH-HHHHHHHHHHHHHTCCHHHHHHHCCEEEECC
T ss_pred CCCHHHHHHHHHHHHHhchhhhcCEEEEEeCcccCCCCCccHHHHHHh-hhHHHHHHHHHHhCccccccccccCCEEEEe
Confidence 578889999999999999999999999999998653334789999973 4667999999987 4455677
Q ss_pred cCCcCccc---------chhHHHHHHHHHHHHHH
Q 048606 71 NKTKYKVK---------RTEQVQQLLSLVNAVNV 95 (276)
Q Consensus 71 NK~~~~~~---------q~~QV~ELL~kIe~mV~ 95 (276)
|...-... ....+..||..|..|+.
T Consensus 209 ~~~~~~~n~~g~~~lp~~~~w~~~~~~~~~~~~~ 242 (262)
T 3def_A 209 NSGRCSKNDKDEKALPNGEAWIPNLVKAITDVAT 242 (262)
T ss_dssp CCTTCCBCTTSCBBCTTSCBSCC-CHHHHHHHHT
T ss_pred CCCCCCCCCCCCeECCCCCeeHHHHHHHHHHHHh
Confidence 76431100 12367889999998875
No 5
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=96.88 E-value=0.004 Score=54.67 Aligned_cols=107 Identities=14% Similarity=0.284 Sum_probs=76.0
Q ss_pred CCcHHHHHHHHHHHHHhchhhcceeEEEEecCCCCCCchhcHHHHhccCCCchHHHHHHHcCCce-----------EEEe
Q 048606 2 RFSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILKLCDHRC-----------VLFD 70 (276)
Q Consensus 2 RFTeEE~~ale~Iq~lFG~~a~kytIVLFT~gDeLe~~~~tlEdyL~~~~~~~LqeLIekCGgRy-----------hvFN 70 (276)
+|+..+...+..+...||..++.++|||+|..|-...++.++++|+.. ....|+.+++. |.++ .+.+
T Consensus 133 ~~~~~~~~~~~~l~~~~~~~~~~~iivV~nK~Dl~~~~~~~~~~~~~~-~~~~l~~~~~~-~~~~~~~~~~~~~p~~~v~ 210 (270)
T 1h65_A 133 RVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSK-RSEALLQVVRS-GASLKKDAQASDIPVVLIE 210 (270)
T ss_dssp CCCHHHHHHHHHHHHHHCGGGGGGEEEEEECCSCCCGGGCCHHHHHHH-HHHHHHHHHHH-HTTCCTTSGGGCCCEEECC
T ss_pred cCCHHHHHHHHHHHHHhCcccccCEEEEEECcccCCcCCCCHHHHHHH-HHHHHHHHHHH-hhhhhhhhhhccCCEEEEe
Confidence 588888999999999999999999999999999655433589999973 45667777753 3332 3333
Q ss_pred cCCc------Ccc---cchhHHHHHHHHHHHHHHHcCCCCCC-hHHHHHH
Q 048606 71 NKTK------YKV---KRTEQVQQLLSLVNAVNVKNGGQPYT-NEFFAEL 110 (276)
Q Consensus 71 NK~~------~~~---~q~~QV~ELL~kIe~mV~eNgG~~YT-nemf~ea 110 (276)
|... +.. ....+...||..|..++..++...+. |.++...
T Consensus 211 ~~~~~~~~~~~~~v~~~~~~w~~~Ll~~l~~~~~~~~~~l~~d~~~~~~~ 260 (270)
T 1h65_A 211 NSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLIDKL 260 (270)
T ss_dssp CCTTCCBCTTSCBBCTTSCBHHHHHHHHHHHHHTSSSCCEECCHHHHHHH
T ss_pred CCCcccccCCCceECCCCCCcHHHHHHHHHHHHhcCCCceecCHHHhcCC
Confidence 3211 000 12457889999999999998887544 4555544
No 6
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=82.36 E-value=35 Score=34.13 Aligned_cols=66 Identities=18% Similarity=0.297 Sum_probs=39.3
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcHHHHHHHHHHHHHHHhh
Q 048606 167 EDQMHESNEYQIKRITEMVESNLKETTTRLEQQLAEEQVARLKGEEVAQVAQRKSNDKIHKLRDNLESAQRE 238 (276)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~e~~l~~~~~~le~~l~~eq~arl~~e~~~~~~~~~s~~~i~~l~~~le~a~~~ 238 (276)
-++-+++|+++|++|++.+|+.-+-....++..| +.+|+..+ ...+.-...++..|...+..-++.
T Consensus 517 ~~~~~~~~~e~~~ql~~kme~~~~~~~~e~~~~~----~~~~~~~~--~~~~~g~~~~~~~~~~ei~~l~~~ 582 (592)
T 1f5n_A 517 MEQKERSYQEHLKQLTEKMENDRVQLLKEQERTL----ALKLQEQE--QLLKEGFQKESRIMKNEIQDLQTK 582 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH--HHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456789999999999999998877766666655 22232221 122223444555555554444443
No 7
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=62.57 E-value=37 Score=26.26 Aligned_cols=32 Identities=13% Similarity=0.003 Sum_probs=13.6
Q ss_pred CCceEEEecCCcCcccchhHHHHHHHHHHHHHHH
Q 048606 63 DHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVK 96 (276)
Q Consensus 63 GgRyhvFNNK~~~~~~q~~QV~ELL~kIe~mV~e 96 (276)
+-..+++=||..-. ...++......+......
T Consensus 133 ~~p~i~v~nK~Dl~--~~~~~~~~~~~~~~~~~~ 164 (195)
T 3pqc_A 133 NIPFTIVLTKMDKV--KMSERAKKLEEHRKVFSK 164 (195)
T ss_dssp TCCEEEEEECGGGS--CGGGHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEChhcC--ChHHHHHHHHHHHHHHhh
Confidence 44455554543210 123444445555555444
No 8
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=57.83 E-value=36 Score=27.40 Aligned_cols=13 Identities=8% Similarity=0.107 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHH
Q 048606 82 QVQQLLSLVNAVN 94 (276)
Q Consensus 82 QV~ELL~kIe~mV 94 (276)
.|.+|+..|..++
T Consensus 197 gv~~l~~~l~~~~ 209 (223)
T 4dhe_A 197 GLDDAHALIESWL 209 (223)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc
Confidence 4555555554444
No 9
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=57.47 E-value=38 Score=27.44 Aligned_cols=27 Identities=22% Similarity=0.310 Sum_probs=17.4
Q ss_pred HHHHHHHHhchh-hcceeEEEEecCCCC
Q 048606 10 AVHHLQTLFGKK-IFDYMIVVFTGGDDL 36 (276)
Q Consensus 10 ale~Iq~lFG~~-a~kytIVLFT~gDeL 36 (276)
+|......|... .....|||||.|..-
T Consensus 97 al~~a~~~l~~~~~~~~~ivllTDG~~~ 124 (218)
T 3ibs_A 97 AINLATRSFTPQEGVGRAIIVITDGENH 124 (218)
T ss_dssp HHHHHHTTSCSCSSCCEEEEEEECCTTC
T ss_pred HHHHHHHHHhhCCCCCcEEEEEcCCCCC
Confidence 445555555443 456799999988654
No 10
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=51.52 E-value=89 Score=31.17 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=24.0
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048606 169 QMHESNEYQIKRITEMVESNLKETTTRLEQQLA 201 (276)
Q Consensus 169 ~~~~~~~~~~~~~~~~~e~~l~~~~~~le~~l~ 201 (276)
+|.++....++....|++.+|++-...|++.+.
T Consensus 534 kme~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~ 566 (592)
T 1f5n_A 534 KMENDRVQLLKEQERTLALKLQEQEQLLKEGFQ 566 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577777777788888888888887666666553
No 11
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=49.03 E-value=9.3 Score=33.13 Aligned_cols=72 Identities=10% Similarity=0.147 Sum_probs=39.5
Q ss_pred CcHHHHHHHHHHHHHhchhhcceeEEEEecCCCCCCchhcHHHHhccCCCchHHHHHHHcCCceEEEecCCcCcccchhH
Q 048606 3 FSQEEEAAVHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILKLCDHRCVLFDNKTKYKVKRTEQ 82 (276)
Q Consensus 3 FTeEE~~ale~Iq~lFG~~a~kytIVLFT~gDeLe~~~~tlEdyL~~~~~~~LqeLIekCGgRyhvFNNK~~~~~~q~~Q 82 (276)
+++.+...+..+.. ...+|+|+|..|.+.. ..+..+.. .+...+..+|-+++.|+.++. ..
T Consensus 130 ~~~~d~~~l~~l~~------~~pvi~V~nK~D~~~~--~e~~~~~~-----~i~~~l~~~~i~v~~~sa~~~------~~ 190 (274)
T 3t5d_A 130 LKPLDIEFMKRLHE------KVNIIPLIAKADTLTP--EECQQFKK-----QIMKEIQEHKIKIYEFPETDD------EE 190 (274)
T ss_dssp CCHHHHHHHHHHTT------TSCEEEEESSGGGSCH--HHHHHHHH-----HHHHHHHHTTCCCCCC-------------
T ss_pred CCHHHHHHHHHHhc------cCCEEEEEeccCCCCH--HHHHHHHH-----HHHHHHHHcCCeEEcCCCCCC------hh
Confidence 55666555555443 4568888888887754 45555554 256677778888777766543 35
Q ss_pred HHHHHHHHHHH
Q 048606 83 VQQLLSLVNAV 93 (276)
Q Consensus 83 V~ELL~kIe~m 93 (276)
+.+|+..|..+
T Consensus 191 ~~~l~~~l~~~ 201 (274)
T 3t5d_A 191 ENKLVKKIKDR 201 (274)
T ss_dssp ----CHHHHHT
T ss_pred HHHHHHHHhcC
Confidence 66666666554
No 12
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=42.08 E-value=20 Score=24.02 Aligned_cols=23 Identities=13% Similarity=0.208 Sum_probs=19.9
Q ss_pred CCCcHHHHHHHHHHHHHhchhhc
Q 048606 1 SRFSQEEEAAVHHLQTLFGKKIF 23 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~a~ 23 (276)
|+||++|...|-.+...||++-|
T Consensus 3 ~~WT~eEd~~L~~~v~~~G~~~W 25 (53)
T 1w0t_A 3 QAWLWEEDKNLRSGVRKYGEGNW 25 (53)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCH
T ss_pred CCCCHHHHHHHHHHHHHHCcCCH
Confidence 68999999999999999997544
No 13
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=40.39 E-value=48 Score=27.68 Aligned_cols=77 Identities=10% Similarity=0.135 Sum_probs=52.5
Q ss_pred chhhcceeEEEEecCCCCCCchhcHHHHhccCCCchHHHHHHHcCCceEEEecCC--cCcccchhHHHHHHHHHHHHHHH
Q 048606 19 GKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILKLCDHRCVLFDNKT--KYKVKRTEQVQQLLSLVNAVNVK 96 (276)
Q Consensus 19 G~~a~kytIVLFT~gDeLe~~~~tlEdyL~~~~~~~LqeLIekCGgRyhvFNNK~--~~~~~q~~QV~ELL~kIe~mV~e 96 (276)
+.+.++.++|+||.-+.-++ .+.++.+.+ +-..+.++..+.|-.-+++..-+ +++--.-....++|..++..++.
T Consensus 31 ~~~~~e~aLVvF~~VE~~De--~~~~~vv~~-av~eI~~~a~kv~~~~ivlYPyAHLSs~La~P~~A~~iL~~le~~L~~ 107 (143)
T 2hl0_A 31 KRGRMEEVLVAFISVEKVDE--KNPEEVSLK-AIEEISKVAEQVKAENVFVYPFAHLSSELAKPSVAMDILNRVYQGLKE 107 (143)
T ss_dssp SEEEEEEEEEEEEECBGGGG--GCHHHHHHH-HHHHHHHHHHHHTCCEEEEEECGGGCSSBCCHHHHHHHHHHHHHHHHH
T ss_pred cccceeeeEEEEEEEccCCc--CCHHHHHHH-HHHHHHHHHHhcCCCEEEEeccccccCccCChHHHHHHHHHHHHHHHh
Confidence 44567899999998776544 455666653 45568999999998777665432 11101125678899999999887
Q ss_pred cC
Q 048606 97 NG 98 (276)
Q Consensus 97 Ng 98 (276)
.|
T Consensus 108 ~g 109 (143)
T 2hl0_A 108 RG 109 (143)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 14
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=37.00 E-value=22 Score=28.08 Aligned_cols=47 Identities=28% Similarity=0.423 Sum_probs=32.9
Q ss_pred cHHHHHHHHHHHHHHHhhcHHHhhhhh--HHhhhhhhHHHHHHHHHhhhcccc---ccccC
Q 048606 221 SNDKIHKLRDNLESAQRETEDQMHESY--EDQIKRITEVVFFMLLLLTSKYDM---HIVHF 276 (276)
Q Consensus 221 s~~~i~~l~~~le~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 276 (276)
|++++..|+..++...+|+..++.+-. +-++.+ ..|-..||. -||||
T Consensus 10 ~~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~---------~~l~Gd~~~~~TKVlH~ 61 (100)
T 1go4_E 10 SREEADTLRLKVEELEGERSRLEEEKRMLEAQLER---------RALQGDYDQSRTKVLHM 61 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------SSCCSCCCTTTEEEEEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HhhccccCCccCeeeee
Confidence 678899999999999999998876543 222222 234566766 67776
No 15
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=34.42 E-value=31 Score=22.85 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=18.9
Q ss_pred CCCcHHHHHHHHHHHHHhchh
Q 048606 1 SRFSQEEEAAVHHLQTLFGKK 21 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~ 21 (276)
|++|++|...|..+...||..
T Consensus 4 ~~Wt~eED~~L~~~v~~~G~~ 24 (52)
T 1gvd_A 4 GPWTKEEDQRLIKLVQKYGPK 24 (52)
T ss_dssp CSCCHHHHHHHHHHHHHHCTT
T ss_pred CCCCHHHHHHHHHHHHHHCcC
Confidence 679999999999999999974
No 16
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=33.76 E-value=28 Score=25.58 Aligned_cols=21 Identities=19% Similarity=0.430 Sum_probs=19.5
Q ss_pred CCCcHHHHHHHHHHHHHhchh
Q 048606 1 SRFSQEEEAAVHHLQTLFGKK 21 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~ 21 (276)
|.||+||...|-.+...||.+
T Consensus 24 ~~wT~EED~~L~~l~~~~G~k 44 (73)
T 2llk_A 24 GKYTPEEIEKLKELRIKHGND 44 (73)
T ss_dssp CSSCHHHHHHHHHHHHHHSSC
T ss_pred CCCCHHHHHHHHHHHHHHCCC
Confidence 679999999999999999987
No 17
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=33.71 E-value=1.6e+02 Score=22.73 Aligned_cols=32 Identities=6% Similarity=0.020 Sum_probs=13.8
Q ss_pred HcCCceEEEecCCcCcccchhHHHHHHHHHHHHH
Q 048606 61 LCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVN 94 (276)
Q Consensus 61 kCGgRyhvFNNK~~~~~~q~~QV~ELL~kIe~mV 94 (276)
..+-.++++=||..-. ...++...+..+...+
T Consensus 132 ~~~~p~i~v~nK~Dl~--~~~~~~~~~~~~~~~~ 163 (195)
T 1svi_A 132 YYGIPVIVIATKADKI--PKGKWDKHAKVVRQTL 163 (195)
T ss_dssp HTTCCEEEEEECGGGS--CGGGHHHHHHHHHHHH
T ss_pred HcCCCEEEEEECcccC--ChHHHHHHHHHHHHHH
Confidence 3444555555553211 1234444444444433
No 18
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=33.59 E-value=1.3e+02 Score=22.19 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcHHHHHHHHH
Q 048606 187 SNLKETTTRLEQQLAEEQVARLKGEEVAQVAQRKSNDKIHKLRD 230 (276)
Q Consensus 187 ~~l~~~~~~le~~l~~eq~arl~~e~~~~~~~~~s~~~i~~l~~ 230 (276)
+.|.+++..|+++|++.+..+-........+...-+..|..|.+
T Consensus 17 ~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~KI~eL~e 60 (72)
T 3cve_A 17 KDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELTE 60 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 45777778889999888877666655566666666666665544
No 19
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=33.55 E-value=31 Score=22.78 Aligned_cols=21 Identities=24% Similarity=0.480 Sum_probs=18.8
Q ss_pred CCCcHHHHHHHHHHHHHhchh
Q 048606 1 SRFSQEEEAAVHHLQTLFGKK 21 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~ 21 (276)
|+||.+|...|..+...||..
T Consensus 4 ~~Wt~eED~~L~~~v~~~G~~ 24 (52)
T 1guu_A 4 TRWTREEDEKLKKLVEQNGTD 24 (52)
T ss_dssp CCCCHHHHHHHHHHHHHHCSS
T ss_pred CCCCHHHHHHHHHHHHHhCCC
Confidence 679999999999999999973
No 20
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=33.14 E-value=1.3e+02 Score=22.59 Aligned_cols=44 Identities=16% Similarity=0.250 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcHHHHHHHHH
Q 048606 187 SNLKETTTRLEQQLAEEQVARLKGEEVAQVAQRKSNDKIHKLRD 230 (276)
Q Consensus 187 ~~l~~~~~~le~~l~~eq~arl~~e~~~~~~~~~s~~~i~~l~~ 230 (276)
+.|++++..|+++|++.+..+-........+...-+..|..|.+
T Consensus 23 ~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~e 66 (79)
T 3cvf_A 23 AELEHQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELSE 66 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 45777788899999888877666655556666666665555543
No 21
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=30.36 E-value=3.1e+02 Score=25.29 Aligned_cols=28 Identities=29% Similarity=0.238 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 048606 188 NLKETTTRLEQQLAEEQVARLKGEEVAQ 215 (276)
Q Consensus 188 ~l~~~~~~le~~l~~eq~arl~~e~~~~ 215 (276)
+.+..+.-|+++|.+-|.-=.++|..|+
T Consensus 394 e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (471)
T 3mq9_A 394 EARNVTHLLQQELTEAQKGFQDVEAQAA 421 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhhhHHHHHHHhh
Confidence 4445556677777776666666665554
No 22
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=29.90 E-value=39 Score=23.87 Aligned_cols=24 Identities=17% Similarity=0.249 Sum_probs=20.5
Q ss_pred CCCcHHHHHHHHHHHHHhchhhcc
Q 048606 1 SRFSQEEEAAVHHLQTLFGKKIFD 24 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~a~k 24 (276)
+++|+||...|..+...||+.-|.
T Consensus 12 ~~WT~eED~~L~~~V~~~G~~~W~ 35 (64)
T 3sjm_A 12 QKWTVEESEWVKAGVQKYGEGNWA 35 (64)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHH
T ss_pred CCCCHHHHHHHHHHHHccCCCchH
Confidence 479999999999999999986443
No 23
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=29.70 E-value=39 Score=22.99 Aligned_cols=21 Identities=24% Similarity=0.582 Sum_probs=18.7
Q ss_pred CCCcHHHHHHHHHHHHHhchh
Q 048606 1 SRFSQEEEAAVHHLQTLFGKK 21 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~ 21 (276)
++||.+|...|..+...||+.
T Consensus 9 ~~Wt~eED~~L~~~v~~~G~~ 29 (60)
T 2d9a_A 9 VKWTHEEDEQLRALVRQFGQQ 29 (60)
T ss_dssp SCCCHHHHHHHHHHHHHTCTT
T ss_pred CCCCHHHHHHHHHHHHHhCCC
Confidence 579999999999999999963
No 24
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=29.16 E-value=39 Score=24.05 Aligned_cols=21 Identities=19% Similarity=0.403 Sum_probs=19.1
Q ss_pred CCCcHHHHHHHHHHHHHhchh
Q 048606 1 SRFSQEEEAAVHHLQTLFGKK 21 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~ 21 (276)
|.||++|...|-.+...||..
T Consensus 10 ~~WT~eEd~~l~~~~~~~G~~ 30 (72)
T 2cu7_A 10 VKWTIEEKELFEQGLAKFGRR 30 (72)
T ss_dssp CCCCHHHHHHHHHHHHHTCSC
T ss_pred CCCCHHHHHHHHHHHHHHCcC
Confidence 579999999999999999984
No 25
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=28.63 E-value=92 Score=19.97 Aligned_cols=27 Identities=22% Similarity=0.274 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 048606 178 IKRITEMVESNLKETTTRLEQQLAEEQVARLKG 210 (276)
Q Consensus 178 ~~~~~~~~e~~l~~~~~~le~~l~~eq~arl~~ 210 (276)
+++|.+.||+-|.+. ..||.. ++||+.
T Consensus 2 MnQLEdKvEeLl~~~-~~Le~E-----V~RLk~ 28 (33)
T 3c3g_A 2 MKXIEXKLXEIXSKX-YHXENX-----LARIKX 28 (33)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHH-----HHHHHH
T ss_pred ccHHHHHHHHHHHHh-hHHHHH-----HHHHHH
Confidence 467788888877766 334433 666653
No 26
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=28.57 E-value=39 Score=23.75 Aligned_cols=23 Identities=13% Similarity=0.208 Sum_probs=19.8
Q ss_pred CCCcHHHHHHHHHHHHHhchhhc
Q 048606 1 SRFSQEEEAAVHHLQTLFGKKIF 23 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~a~ 23 (276)
+.||.+|...|-.+...||..-|
T Consensus 11 ~~WT~eED~~L~~~v~~~G~~~W 33 (69)
T 1ity_A 11 QAWLWEEDKNLRSGVRKYGEGNW 33 (69)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSCH
T ss_pred CCCCHHHHHHHHHHHHHHCCCcH
Confidence 57999999999999999997544
No 27
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=25.76 E-value=1.1e+02 Score=19.71 Aligned_cols=27 Identities=22% Similarity=0.315 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 048606 178 IKRITEMVESNLKETTTRLEQQLAEEQVARLKG 210 (276)
Q Consensus 178 ~~~~~~~~e~~l~~~~~~le~~l~~eq~arl~~ 210 (276)
+++|.+.||+-|.+. ..||.. ++||+.
T Consensus 3 MnQLEdKVEeLl~~~-~~Le~E-----V~RLk~ 29 (34)
T 3c3f_A 3 MXQIEXKLEXILSXL-YHXENE-----XARIXK 29 (34)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHH-----HHHHHH
T ss_pred HHHHHHHHHHHHhhh-hHHHHH-----HHHHHH
Confidence 567888888888766 333333 666653
No 28
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*
Probab=25.05 E-value=1.3e+02 Score=26.49 Aligned_cols=84 Identities=13% Similarity=0.169 Sum_probs=48.0
Q ss_pred CcHHHHHH-HHHHHHHhchhhcceeEEEEecCCCCCCchhcHHHHhccCCCchHHHHHHHcCCceEEEecCCcCcccchh
Q 048606 3 FSQEEEAA-VHHLQTLFGKKIFDYMIVVFTGGDDLEDNEKTLEDYLGLECPKPLKEILKLCDHRCVLFDNKTKYKVKRTE 81 (276)
Q Consensus 3 FTeEE~~a-le~Iq~lFG~~a~kytIVLFT~gDeLe~~~~tlEdyL~~~~~~~LqeLIekCGgRyhvFNNK~~~~~~q~~ 81 (276)
+|..+... +..+.. .-..+|||+|.-|.+.+. ..+... +..+-+.+++.+.+|.-.+..+ .
T Consensus 106 ~~~~~~~~~~~~l~~-----~~~pvilV~NK~Dl~~~~-~~~~~~--------~~~l~~~~~~~~~i~~vSA~~g----~ 167 (308)
T 3iev_A 106 WRPRDEEIYQNFIKP-----LNKPVIVVINKIDKIGPA-KNVLPL--------IDEIHKKHPELTEIVPISALKG----A 167 (308)
T ss_dssp SCHHHHHHHHHHTGG-----GCCCEEEEEECGGGSSSG-GGGHHH--------HHHHHHHCTTCCCEEECBTTTT----B
T ss_pred CCchhHHHHHHHHHh-----cCCCEEEEEECccCCCCH-HHHHHH--------HHHHHHhccCCCeEEEEeCCCC----C
Confidence 44555444 444333 234678888888866321 333333 3455566664444454444332 6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCChH
Q 048606 82 QVQQLLSLVNAVNVKNGGQPYTNE 105 (276)
Q Consensus 82 QV~ELL~kIe~mV~eNgG~~YTne 105 (276)
.|.+|++.|...+.. +..+|...
T Consensus 168 gv~~L~~~l~~~l~~-~~~~~~~~ 190 (308)
T 3iev_A 168 NLDELVKTILKYLPE-GEPLFPED 190 (308)
T ss_dssp SHHHHHHHHHHHSCB-CCCSSCTT
T ss_pred CHHHHHHHHHHhCcc-CCCCCCcc
Confidence 899999999988764 44566554
No 29
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=24.85 E-value=2.4e+02 Score=21.76 Aligned_cols=47 Identities=17% Similarity=0.369 Sum_probs=28.7
Q ss_pred HhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcHHHHHHHHHHHHH
Q 048606 172 ESNEYQIK-RITEMVESNLKETTTRLEQQLAEEQVARLKGEEVAQVAQRKSNDKIHKLRDNLES 234 (276)
Q Consensus 172 ~~~~~~~~-~~~~~~e~~l~~~~~~le~~l~~eq~arl~~e~~~~~~~~~s~~~i~~l~~~le~ 234 (276)
..|+-+|. +|.+| ..++.|.-.||.+ -........+||.+||-.||.
T Consensus 39 ~eyE~ki~~Qi~Em--q~Ir~tvyeLE~~--------------h~kmKq~YEeEI~rLr~eLe~ 86 (92)
T 3vp9_A 39 KDYDFKMNQQLAEM--QQIRNTVYERELT--------------HRKMKDAYEEEIKHLKLGLEQ 86 (92)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHH--HHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHH
Confidence 35655543 34444 5566666666655 234455677888888888875
No 30
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.35 E-value=53 Score=22.79 Aligned_cols=22 Identities=32% Similarity=0.504 Sum_probs=19.2
Q ss_pred CCCcHHHHHHHHHHHHHhchhh
Q 048606 1 SRFSQEEEAAVHHLQTLFGKKI 22 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~a 22 (276)
+.||.+|...|-.+...||..+
T Consensus 10 ~~WT~eED~~L~~~~~~~g~~W 31 (66)
T 2din_A 10 TEWSREEEEKLLHLAKLMPTQW 31 (66)
T ss_dssp CCCCHHHHHHHHHHHHHCTTCH
T ss_pred CCCCHHHHHHHHHHHHHcCCCH
Confidence 5799999999999999999843
No 31
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=24.23 E-value=1.1e+02 Score=26.12 Aligned_cols=51 Identities=33% Similarity=0.410 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcHHHHHHHHHHHHHHHhhcHH
Q 048606 190 KETTTRLEQQLAEEQVARLKGEEVAQVAQRKSNDKIHKLRDNLESAQRETED 241 (276)
Q Consensus 190 ~~~~~~le~~l~~eq~arl~~e~~~~~~~~~s~~~i~~l~~~le~a~~~~~~ 241 (276)
.+.+..||+||.+- .+-|++|-.+...-+|+..|+.+-.-.+|.+-++..+
T Consensus 5 neKi~~LekQL~E~-n~kLk~EsE~~~rlkK~~tEl~k~~~~~E~~~rELq~ 55 (168)
T 3o0z_A 5 NEKLSQLQKQLEEA-NDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQE 55 (168)
T ss_dssp -----CTHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566666544 4556666666666666666666655555555555444
No 32
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=23.34 E-value=89 Score=20.17 Aligned_cols=27 Identities=26% Similarity=0.474 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 048606 177 QIKRITEMVESNLKETTTRLEQQLAEEQVARLK 209 (276)
Q Consensus 177 ~~~~~~~~~e~~l~~~~~~le~~l~~eq~arl~ 209 (276)
.+++|.+.||+-|.+. ..|+.. ++||+
T Consensus 2 RMnQLEdKvEeLl~~~-~~L~~E-----V~RLk 28 (34)
T 2bni_A 2 RMKQIEDKLEEILSKG-HHICNE-----LARIK 28 (34)
T ss_dssp -CHHHHHHHHHHHHHH-HHHHHH-----HHHHH
T ss_pred chhHHHHHHHHHHHcc-HHHHHH-----HHHHH
Confidence 3567888888888766 334433 56665
No 33
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=23.08 E-value=1.6e+02 Score=22.31 Aligned_cols=40 Identities=28% Similarity=0.321 Sum_probs=32.4
Q ss_pred HHHHHHHcCCceEEEecCCcCcccchhHHHHHHHHHHHHHHHcC
Q 048606 55 LKEILKLCDHRCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNG 98 (276)
Q Consensus 55 LqeLIekCGgRyhvFNNK~~~~~~q~~QV~ELL~kIe~mV~eNg 98 (276)
|..-+.+.|.|-+-+.-.+.. ..|..+||+.|..++..-|
T Consensus 38 lekalaragarnvqitisaen----deqakelleliarllqklg 77 (96)
T 2jvf_A 38 LEKALARAGARNVQITISAEN----DEQAKELLELIARLLQKLG 77 (96)
T ss_dssp HHHHHHHHTCSEEEEEEECSS----HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhccccceEEEEEecC----hHHHHHHHHHHHHHHHHhC
Confidence 566688899999888776543 4899999999999988765
No 34
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=22.28 E-value=1.6e+02 Score=23.71 Aligned_cols=68 Identities=18% Similarity=0.156 Sum_probs=41.4
Q ss_pred eeEEEEecCCCCCCchhcHHHHhc-----cCCCchHHHHHHHcCC-ceEEEecCCcCcccchhHHHHHHHHHHHHHHHcC
Q 048606 25 YMIVVFTGGDDLEDNEKTLEDYLG-----LECPKPLKEILKLCDH-RCVLFDNKTKYKVKRTEQVQQLLSLVNAVNVKNG 98 (276)
Q Consensus 25 ytIVLFT~gDeLe~~~~tlEdyL~-----~~~~~~LqeLIekCGg-RyhvFNNK~~~~~~q~~QV~ELL~kIe~mV~eNg 98 (276)
-+|||.|.-|.... ..+.+.+. .-.......+...+|. .|+..+-++. ..|.+|+..|-..+..++
T Consensus 140 piilv~nK~Dl~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~SA~~g------~gi~el~~~l~~~~~~~~ 211 (214)
T 2j1l_A 140 PIIVVGCKTDLRKD--KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLH------DNVHAVFQEAAEVALSSR 211 (214)
T ss_dssp CEEEEEECGGGGSC--HHHHHHHHHTTCCCCCHHHHHHHHHHTTCSEEEECBTTTT------BSHHHHHHHHHHHHHHC-
T ss_pred CEEEEEEChhhhcc--chhhhhhcccccCcccHHHHHHHHHhcCCCEEEEecCCCC------CCHHHHHHHHHHHHHHhh
Confidence 46777787776554 33333321 0112345677888886 7777766653 468999998887777665
Q ss_pred CC
Q 048606 99 GQ 100 (276)
Q Consensus 99 G~ 100 (276)
++
T Consensus 212 ~r 213 (214)
T 2j1l_A 212 GR 213 (214)
T ss_dssp --
T ss_pred cC
Confidence 53
No 35
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=21.94 E-value=2.8e+02 Score=21.55 Aligned_cols=25 Identities=36% Similarity=0.504 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHH
Q 048606 191 ETTTRLEQQLAEEQVARLKGEEVAQ 215 (276)
Q Consensus 191 ~~~~~le~~l~~eq~arl~~e~~~~ 215 (276)
....+|...|.+++..|..+|....
T Consensus 26 ~e~~~L~~~l~eE~~~R~~aE~~~~ 50 (97)
T 2eqb_B 26 DEVKRLREDIAKENELRTKAEEEAD 50 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3346678888889999988887544
No 36
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.88 E-value=62 Score=22.71 Aligned_cols=21 Identities=14% Similarity=0.316 Sum_probs=18.5
Q ss_pred CCCcHHHHHHHHHHHHHhchh
Q 048606 1 SRFSQEEEAAVHHLQTLFGKK 21 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~ 21 (276)
|+||.+|...|..+...||..
T Consensus 10 ~~Wt~eED~~L~~~v~~~G~~ 30 (70)
T 2dim_A 10 GVWRNTEDEILKAAVMKYGKN 30 (70)
T ss_dssp CCCCHHHHHHHHHHHHHTCSS
T ss_pred CCCCHHHHHHHHHHHHHHCcC
Confidence 579999999999999999953
No 37
>1eyq_A Chalcone-flavonone isomerase 1; chalcone isomerase, flavonoid; HET: NAR; 1.85A {Medicago sativa} SCOP: d.36.1.1 PDB: 1eyp_A* 1fm7_A* 1fm8_A* 1jep_A* 1jx0_A* 1jx1_A*
Probab=21.69 E-value=72 Score=27.80 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=27.4
Q ss_pred CCCcHHHHHHHHHHHHHhchh-hcceeEEEEec
Q 048606 1 SRFSQEEEAAVHHLQTLFGKK-IFDYMIVVFTG 32 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~-a~kytIVLFT~ 32 (276)
|.+|+.+..+|+.+..+|..+ +.+.+.|.||+
T Consensus 122 g~~~~~e~~~L~~f~~~F~~~~~~kG~~i~~~~ 154 (222)
T 1eyq_A 122 GTYGDAEAEAMQKFAEAFKPVNFPPGASVFYRQ 154 (222)
T ss_dssp TCCCHHHHHHHHHHHHHHTTCEECTTCEEEEEE
T ss_pred CccccchHHHHHHHHHHhCCCCCCCCCEEEEEE
Confidence 347889999999999999766 77889999986
No 38
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=21.50 E-value=58 Score=22.31 Aligned_cols=21 Identities=19% Similarity=0.162 Sum_probs=18.4
Q ss_pred CCCcHHHHHHHHHHHHHhchh
Q 048606 1 SRFSQEEEAAVHHLQTLFGKK 21 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~ 21 (276)
+.||++|...|-.+...||..
T Consensus 9 ~~WT~eED~~L~~~v~~~G~~ 29 (60)
T 1x41_A 9 PSWTAQEEMALLEAVMDCGFG 29 (60)
T ss_dssp SSSCHHHHHHHHHHHHHTCTT
T ss_pred CCCCHHHHHHHHHHHHHHCcC
Confidence 479999999999999999963
No 39
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=21.45 E-value=63 Score=24.18 Aligned_cols=21 Identities=29% Similarity=0.504 Sum_probs=19.2
Q ss_pred CCCcHHHHHHHHHHHHHhchh
Q 048606 1 SRFSQEEEAAVHHLQTLFGKK 21 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~ 21 (276)
|+||++|...|..+...||..
T Consensus 5 ~~WT~eED~~L~~~v~~~g~~ 25 (105)
T 1gv2_A 5 GPWTKEEDQRVIKLVQKYGPK 25 (105)
T ss_dssp SCCCHHHHHHHHHHHHHHCTT
T ss_pred CCCCHHHHHHHHHHHHHhCCC
Confidence 689999999999999999974
No 40
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=21.36 E-value=60 Score=25.50 Aligned_cols=25 Identities=12% Similarity=0.230 Sum_probs=21.4
Q ss_pred CCCcHHHHHHHHHHHHHhchhhcce
Q 048606 1 SRFSQEEEAAVHHLQTLFGKKIFDY 25 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~~a~ky 25 (276)
|+||.+|-..|..+...||..-|..
T Consensus 3 g~Wt~eED~~L~~~v~~~g~~~W~~ 27 (131)
T 3zqc_A 3 GPFTEAEDDLIREYVKENGPQNWPR 27 (131)
T ss_dssp SSCCHHHHHHHHHHHHHHCSCCGGG
T ss_pred CCCCHHHHHHHHHHHHHhCcCCHHH
Confidence 7899999999999999999765543
No 41
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=20.69 E-value=61 Score=24.57 Aligned_cols=20 Identities=25% Similarity=0.591 Sum_probs=18.6
Q ss_pred CCCcHHHHHHHHHHHHHhch
Q 048606 1 SRFSQEEEAAVHHLQTLFGK 20 (276)
Q Consensus 1 gRFTeEE~~ale~Iq~lFG~ 20 (276)
|+||.+|-..|..+...||.
T Consensus 2 ~~Wt~eED~~L~~~v~~~g~ 21 (107)
T 2k9n_A 2 VKFTEEEDLKLQQLVMRYGA 21 (107)
T ss_dssp CSSCHHHHHHHHHHHHHHCS
T ss_pred CCCCHHHHHHHHHHHHHHCC
Confidence 68999999999999999995
No 42
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=20.60 E-value=2.3e+02 Score=23.10 Aligned_cols=51 Identities=18% Similarity=0.252 Sum_probs=29.4
Q ss_pred hcHHHHhccCCCchHHHHHHHcCCceEEEecCCcCcccchh--------------HHHHHHHHHHHHHHHcCC
Q 048606 41 KTLEDYLGLECPKPLKEILKLCDHRCVLFDNKTKYKVKRTE--------------QVQQLLSLVNAVNVKNGG 99 (276)
Q Consensus 41 ~tlEdyL~~~~~~~LqeLIekCGgRyhvFNNK~~~~~~q~~--------------QV~ELL~kIe~mV~eNgG 99 (276)
.-|.|||.. --+.--.-|+++||++.+.++... --.+|+..|...|+.-|.
T Consensus 90 ewikdfiee--------akergvevfvvynnkdddrrkeaqqefrsdgvdvrtvsdkeelieqvrrfvrkvgs 154 (162)
T 2l82_A 90 EWIKDFIEE--------AKERGVEVFVVYNNKDDDRRKEAQQEFRSDGVDVRTVSDKEELIEQVRRFVRKVGS 154 (162)
T ss_dssp HHHHHHHHH--------HHHTTCEEEEEEECSCHHHHHHHHHHHCCSSCEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHH--------HHhcCcEEEEEecCCCchhHHHHHHHhhhcCceeeecCCHHHHHHHHHHHHHHhcc
Confidence 457777762 111222358899999765322111 235777777777776653
No 43
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=20.59 E-value=1.2e+02 Score=19.56 Aligned_cols=26 Identities=31% Similarity=0.414 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 048606 178 IKRITEMVESNLKETTTRLEQQLAEEQVARLK 209 (276)
Q Consensus 178 ~~~~~~~~e~~l~~~~~~le~~l~~eq~arl~ 209 (276)
+.++.+.||+=|.+. ..|+.. ++||+
T Consensus 3 MnQLE~kVEeLl~~n-~~Le~e-----V~rLk 28 (34)
T 2oxj_A 3 MXQLEXKVXELLXKN-XHLEXE-----VXRLK 28 (34)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHH-----HHHHH
T ss_pred HHHHHHHHHHHHHhh-hhHHHH-----HHHHH
Confidence 567788888877666 334433 56654
No 44
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=20.44 E-value=1.6e+02 Score=18.79 Aligned_cols=15 Identities=20% Similarity=0.474 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHH
Q 048606 178 IKRITEMVESNLKET 192 (276)
Q Consensus 178 ~~~~~~~~e~~l~~~ 192 (276)
++++.+.||.-+...
T Consensus 2 MnQLEdKVEell~~~ 16 (33)
T 2wq1_A 2 MKQLEDKIEENTSKI 16 (33)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhh
Confidence 467777888777665
No 45
>3zzp_A TS9, ribosomal protein S6; protein folding, RNA-binding; 0.96A {Thermus thermophilus}
Probab=20.24 E-value=85 Score=23.07 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=18.7
Q ss_pred hhHHHHHHHHHHHHHHHcCC
Q 048606 80 TEQVQQLLSLVNAVNVKNGG 99 (276)
Q Consensus 80 ~~QV~ELL~kIe~mV~eNgG 99 (276)
..|+..+++++..++..|||
T Consensus 58 ee~~~~~vek~~~~i~~~Gg 77 (77)
T 3zzp_A 58 QSQLQNEKEIIQRALENYGA 77 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcCC
Confidence 57999999999999999987
Done!