STRING 9.05 
  AT3G23230 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT3G23230
ethylene-responsive factor, putative; encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (139 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
PFT1
PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator; Encodes a nuclear protein t [...] (836 aa)
       0.932
AT4G07700
transposable element gene; gypsy-like retrotransposon family (Athila), has a 3.9e-13 P-value bl [...] (843 aa)
       0.679
AT2G37430
zinc finger (C2H2 type) family protein (ZAT11); zinc finger (C2H2 type) family protein (ZAT11); [...] (178 aa)
       0.573
AT2G22880
VQ motif-containing protein; VQ motif-containing protein; FUNCTIONS IN- molecular_function unkn [...] (114 aa)
       0.556
AT1G22810
AP2 domain-containing transcription factor, putative; encodes a member of the DREB subfamily A- [...] (144 aa)
      0.526
AT2G32030
GCN5-related N-acetyltransferase (GNAT) family protein; GCN5-related N-acetyltransferase (GNAT) [...] (188 aa)
       0.504
WRKY40
WRKY40; transcription factor; Pathogen-induced transcription factor. Binds W-box sequences in v [...] (302 aa)
       0.502
AtPP2-B13
AtPP2-B13 (Phloem protein 2-B13); carbohydrate binding; Phloem protein 2-B13 (AtPP2-B13); FUNCT [...] (284 aa)
       0.501
AT3G02840
immediate-early fungal elicitor family protein; immediate-early fungal elicitor family protein; [...] (379 aa)
       0.495
ERF11
ERF11 (ERF DOMAIN PROTEIN 11); DNA binding / transcription factor/ transcription repressor; enc [...] (166 aa)
     0.493
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: medium (41%)
Permalink