Query 048612
Match_columns 385
No_of_seqs 295 out of 2236
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 19:30:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048612.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048612hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2och_A Hypothetical protein DN 99.8 1.1E-20 3.6E-25 146.7 8.3 69 1-72 4-72 (73)
2 1hdj_A Human HSP40, HDJ-1; mol 99.8 1.8E-20 6.1E-25 146.8 8.4 73 4-77 2-74 (77)
3 2dn9_A DNAJ homolog subfamily 99.8 1.6E-20 5.5E-25 147.7 8.1 72 3-74 5-76 (79)
4 1bq0_A DNAJ, HSP40; chaperone, 99.8 5.8E-21 2E-25 157.9 5.0 74 4-77 2-75 (103)
5 2ctw_A DNAJ homolog subfamily 99.8 4.4E-20 1.5E-24 154.2 8.7 72 3-74 15-86 (109)
6 2ej7_A HCG3 gene; HCG3 protein 99.8 6.9E-20 2.4E-24 145.0 8.3 72 4-75 8-80 (82)
7 2ctp_A DNAJ homolog subfamily 99.8 9.7E-20 3.3E-24 142.9 8.3 71 3-74 5-75 (78)
8 2ctq_A DNAJ homolog subfamily 99.8 3.5E-20 1.2E-24 155.5 6.1 73 3-75 18-90 (112)
9 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.2E-19 4.2E-24 145.8 7.8 71 3-74 15-85 (88)
10 2o37_A Protein SIS1; HSP40, J- 99.8 2E-19 6.7E-24 145.8 8.0 73 1-76 4-76 (92)
11 2ctr_A DNAJ homolog subfamily 99.8 1.3E-19 4.4E-24 145.6 6.8 73 3-76 5-77 (88)
12 2yua_A Williams-beuren syndrom 99.8 2.6E-19 8.9E-24 147.0 8.6 70 3-72 15-84 (99)
13 2dmx_A DNAJ homolog subfamily 99.8 2.1E-19 7.4E-24 145.4 7.4 74 4-77 8-82 (92)
14 2lgw_A DNAJ homolog subfamily 99.8 2.2E-19 7.4E-24 147.7 6.6 72 5-76 2-74 (99)
15 1wjz_A 1700030A21RIK protein; 99.8 3.1E-19 1E-23 144.7 6.6 72 2-73 13-90 (94)
16 3apq_A DNAJ homolog subfamily 99.8 1.4E-18 4.6E-23 158.9 8.5 73 5-77 2-74 (210)
17 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 9.5E-19 3.2E-23 145.9 5.2 71 2-72 12-86 (109)
18 3hho_A CO-chaperone protein HS 99.7 1.8E-16 6E-21 142.9 15.5 69 3-71 2-77 (174)
19 3bvo_A CO-chaperone protein HS 99.7 3.5E-16 1.2E-20 144.6 15.2 66 4-69 42-114 (207)
20 3lz8_A Putative chaperone DNAJ 99.7 2E-18 6.9E-23 170.0 0.0 70 3-73 26-95 (329)
21 2l6l_A DNAJ homolog subfamily 99.7 2.2E-17 7.5E-22 145.8 6.4 70 3-72 8-83 (155)
22 1fpo_A HSC20, chaperone protei 99.7 1.3E-16 4.5E-21 143.4 11.5 68 5-72 1-75 (171)
23 2ys8_A RAB-related GTP-binding 99.7 1.2E-17 4E-22 134.9 3.8 62 3-65 25-86 (90)
24 1gh6_A Large T antigen; tumor 99.7 2.4E-18 8.4E-23 144.9 -0.9 87 4-103 7-95 (114)
25 1faf_A Large T antigen; J doma 99.6 1.9E-16 6.7E-21 124.8 4.3 65 5-74 11-77 (79)
26 1iur_A KIAA0730 protein; DNAJ 99.6 1.9E-16 6.7E-21 127.4 3.0 61 4-64 15-76 (88)
27 2pf4_E Small T antigen; PP2A, 99.6 5.4E-17 1.8E-21 145.9 -0.4 65 4-72 10-76 (174)
28 3uo3_A J-type CO-chaperone JAC 99.6 2.2E-15 7.6E-20 136.5 6.8 65 4-71 10-81 (181)
29 2qwo_B Putative tyrosine-prote 99.6 5.1E-16 1.8E-20 125.8 2.0 56 5-60 33-91 (92)
30 1n4c_A Auxilin; four helix bun 99.6 5.5E-16 1.9E-20 140.2 1.3 63 5-67 117-182 (182)
31 3apo_A DNAJ homolog subfamily 99.5 6.7E-16 2.3E-20 166.5 0.7 75 3-77 19-93 (780)
32 3ag7_A Putative uncharacterize 99.5 1.9E-15 6.7E-20 125.6 2.9 59 3-62 39-104 (106)
33 2guz_A Mitochondrial import in 99.5 8.5E-15 2.9E-19 113.0 2.6 57 4-64 13-70 (71)
34 2y4t_A DNAJ homolog subfamily 98.9 8.2E-10 2.8E-14 107.7 5.1 66 4-69 381-449 (450)
35 2guz_B Mitochondrial import in 98.5 1.3E-07 4.3E-12 71.6 4.2 53 5-61 4-59 (65)
36 3cjl_A Domain of unknown funct 29.7 90 0.0031 24.3 5.2 33 283-315 33-65 (88)
37 1ceu_A Protein (HIV-1 regulato 27.2 68 0.0023 22.5 3.7 29 157-185 16-44 (51)
38 2qzg_A Conserved uncharacteriz 27.1 25 0.00087 27.8 1.6 36 273-308 9-47 (94)
39 1ny9_A Transcriptional activat 20.3 1.7E+02 0.0059 23.9 5.7 52 12-71 71-123 (143)
No 1
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.83 E-value=1.1e-20 Score=146.69 Aligned_cols=69 Identities=55% Similarity=0.946 Sum_probs=63.3
Q ss_pred CCCCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 048612 1 MVKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGK 72 (385)
Q Consensus 1 m~~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~ 72 (385)
|+.+.+||+||||+++++.++||++||+++++||||++++. .+.|+.|++||++|+||.+|..||.+|.
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 78899999999999999999999999999999999999754 5789999999999999999999999985
No 2
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.82 E-value=1.8e-20 Score=146.81 Aligned_cols=73 Identities=45% Similarity=0.800 Sum_probs=67.7
Q ss_pred CCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcccCc
Q 048612 4 ETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSISR 77 (385)
Q Consensus 4 ~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~~~~ 77 (385)
..|||+||||+++++.++||+|||+++++||||+++ ++.+.+.|+.|++||++|+||.+|..||.+|..++..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 368999999999999999999999999999999997 4678899999999999999999999999999877643
No 3
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=1.6e-20 Score=147.66 Aligned_cols=72 Identities=50% Similarity=0.846 Sum_probs=68.3
Q ss_pred CCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcc
Q 048612 3 KETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYS 74 (385)
Q Consensus 3 ~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~ 74 (385)
...|||+||||+++++.++||+|||+++++||||++++++.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 467999999999999999999999999999999999888889999999999999999999999999999755
No 4
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.82 E-value=5.8e-21 Score=157.90 Aligned_cols=74 Identities=45% Similarity=0.766 Sum_probs=69.7
Q ss_pred CCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcccCc
Q 048612 4 ETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSISR 77 (385)
Q Consensus 4 ~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~~~~ 77 (385)
..|||+||||+++++.++||+|||+++++||||++++++.+.++|+.|++||++|+||.+|..||.+|..++..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 46999999999999999999999999999999999877889999999999999999999999999999887654
No 5
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=4.4e-20 Score=154.24 Aligned_cols=72 Identities=36% Similarity=0.718 Sum_probs=68.4
Q ss_pred CCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcc
Q 048612 3 KETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYS 74 (385)
Q Consensus 3 ~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~ 74 (385)
...+||+||||+++|+.++||+|||+++++||||++++++.+.++|+.|++||++|+||.+|..||.+|..+
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~ 86 (109)
T 2ctw_A 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLG 86 (109)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccc
Confidence 467999999999999999999999999999999999988899999999999999999999999999998654
No 6
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=6.9e-20 Score=145.02 Aligned_cols=72 Identities=44% Similarity=0.711 Sum_probs=66.9
Q ss_pred CCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHcCChhHHHHHhhcCCccc
Q 048612 4 ETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDP-QAAERFQVLGEAYQVLSDPFQREAYDKNGKYSI 75 (385)
Q Consensus 4 ~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~-~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~~ 75 (385)
..+||+||||+++++.++||+|||+++++||||++++.+ .+.++|+.|++||++|+||.+|..||.+|..+.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 579999999999999999999999999999999998653 678899999999999999999999999997654
No 7
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=9.7e-20 Score=142.92 Aligned_cols=71 Identities=46% Similarity=0.788 Sum_probs=67.0
Q ss_pred CCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcc
Q 048612 3 KETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYS 74 (385)
Q Consensus 3 ~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~ 74 (385)
...|||+||||+++++.++||+|||+++++||||+++ .+.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 4679999999999999999999999999999999997 5789999999999999999999999999999765
No 8
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=3.5e-20 Score=155.54 Aligned_cols=73 Identities=33% Similarity=0.614 Sum_probs=69.1
Q ss_pred CCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCccc
Q 048612 3 KETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSI 75 (385)
Q Consensus 3 ~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~~ 75 (385)
...|||+||||+++|+.++||+|||+++++||||++++++.+.++|+.|++||+||+||.+|..||.+|..++
T Consensus 18 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 18 DTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 4689999999999999999999999999999999999888899999999999999999999999999987654
No 9
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=1.2e-19 Score=145.78 Aligned_cols=71 Identities=42% Similarity=0.688 Sum_probs=66.7
Q ss_pred CCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcc
Q 048612 3 KETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYS 74 (385)
Q Consensus 3 ~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~ 74 (385)
...|||+||||+++++.++||+|||+++++||||+++ ++.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCC-STTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 4789999999999999999999999999999999997 4778899999999999999999999999999754
No 10
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.78 E-value=2e-19 Score=145.80 Aligned_cols=73 Identities=48% Similarity=0.823 Sum_probs=67.7
Q ss_pred CCCCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcccC
Q 048612 1 MVKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSIS 76 (385)
Q Consensus 1 m~~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~~~ 76 (385)
|+...|||+||||+++++.++||+|||+++++||||+++++ .++|+.|++||++|+||.+|..||.+|..+..
T Consensus 4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 76 (92)
T 2o37_A 4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEAAR 76 (92)
T ss_dssp CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHH
T ss_pred cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhh
Confidence 77889999999999999999999999999999999999765 36999999999999999999999999976654
No 11
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=1.3e-19 Score=145.63 Aligned_cols=73 Identities=45% Similarity=0.726 Sum_probs=68.1
Q ss_pred CCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcccC
Q 048612 3 KETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSIS 76 (385)
Q Consensus 3 ~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~~~ 76 (385)
...+||+||||+++++.++||+|||+++++||||+++ ++.+.++|+.|++||++|+||.+|..||.+|..++.
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 77 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFT 77 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHT
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 3579999999999999999999999999999999997 688999999999999999999999999999876653
No 12
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2.6e-19 Score=146.97 Aligned_cols=70 Identities=39% Similarity=0.654 Sum_probs=66.3
Q ss_pred CCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 048612 3 KETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGK 72 (385)
Q Consensus 3 ~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~ 72 (385)
...+||+||||+++|+.++||+|||+++++||||++++++.+.++|+.|++||+||+||.+|..||....
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 4689999999999999999999999999999999998888999999999999999999999999998643
No 13
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2.1e-19 Score=145.36 Aligned_cols=74 Identities=46% Similarity=0.750 Sum_probs=68.3
Q ss_pred CCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcccCc
Q 048612 4 ETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPND-PQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSISR 77 (385)
Q Consensus 4 ~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~-~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~~~~ 77 (385)
..|||+||||+++++.++||++||+++++||||+++++ +.+.++|+.|++||++|+||.+|..||.+|..+...
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 57999999999999999999999999999999999865 468899999999999999999999999999877644
No 14
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.77 E-value=2.2e-19 Score=147.68 Aligned_cols=72 Identities=49% Similarity=0.802 Sum_probs=65.1
Q ss_pred CcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcccC
Q 048612 5 TEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPND-PQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSIS 76 (385)
Q Consensus 5 ~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~-~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~~~ 76 (385)
.|||+||||+++++.++||+|||+++++||||++++. +.+.+.|+.|++||++|+||.+|..||.+|..++.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 5899999999999999999999999999999999865 45889999999999999999999999999877654
No 15
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.77 E-value=3.1e-19 Score=144.74 Aligned_cols=72 Identities=25% Similarity=0.516 Sum_probs=65.8
Q ss_pred CCCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHHHHHHHcCChhHHHHHhhcCCc
Q 048612 2 VKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPND------PQAAERFQVLGEAYQVLSDPFQREAYDKNGKY 73 (385)
Q Consensus 2 ~~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~------~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~ 73 (385)
+...|||+||||+++|+.++||+|||+++++||||+++++ +.+.++|+.|++||+||+||.+|..||.....
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 3568999999999999999999999999999999998743 56889999999999999999999999998653
No 16
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.75 E-value=1.4e-18 Score=158.87 Aligned_cols=73 Identities=42% Similarity=0.720 Sum_probs=69.3
Q ss_pred CcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcccCc
Q 048612 5 TEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSISR 77 (385)
Q Consensus 5 ~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~~~~ 77 (385)
.|||+||||+++|+.++||+|||+++++||||++++++++.++|+.|++||++|+||.+|+.||.+|..+...
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~ 74 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 74 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence 5899999999999999999999999999999999888899999999999999999999999999999877643
No 17
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.74 E-value=9.5e-19 Score=145.92 Aligned_cols=71 Identities=35% Similarity=0.522 Sum_probs=66.0
Q ss_pred CCCCcchhhcCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 048612 2 VKETEYYDILGVNPSA-SEEEIRKAYYLKARQVHPDKNPN---DPQAAERFQVLGEAYQVLSDPFQREAYDKNGK 72 (385)
Q Consensus 2 ~~~~dyY~iLgv~~~a-s~~eIkkaYrkla~~~HPDk~~~---~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~ 72 (385)
....|||+||||+++| +.++||+|||+++++||||++++ .+.+.+.|+.|++||++|+||.+|..||.+|.
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 4678999999999999 99999999999999999999975 35688999999999999999999999999875
No 18
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.71 E-value=1.8e-16 Score=142.91 Aligned_cols=69 Identities=20% Similarity=0.434 Sum_probs=62.1
Q ss_pred CCCcchhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHhhcC
Q 048612 3 KETEYYDILGVNPSAS--EEEIRKAYYLKARQVHPDKNPNDPQ-----AAERFQVLGEAYQVLSDPFQREAYDKNG 71 (385)
Q Consensus 3 ~~~dyY~iLgv~~~as--~~eIkkaYrkla~~~HPDk~~~~~~-----a~~~f~~I~eAY~vLsd~~~R~~YD~~g 71 (385)
..+|||+||||+++++ ..+||++||+++++||||++++.+. +.+.|+.|++||+||+||.+|..||...
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 3579999999999998 9999999999999999999987654 6689999999999999999999999843
No 19
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.69 E-value=3.5e-16 Score=144.62 Aligned_cols=66 Identities=24% Similarity=0.463 Sum_probs=60.1
Q ss_pred CCcchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHhh
Q 048612 4 ETEYYDILGVNPS--ASEEEIRKAYYLKARQVHPDKNPNDPQ-----AAERFQVLGEAYQVLSDPFQREAYDK 69 (385)
Q Consensus 4 ~~dyY~iLgv~~~--as~~eIkkaYrkla~~~HPDk~~~~~~-----a~~~f~~I~eAY~vLsd~~~R~~YD~ 69 (385)
..|||+||||+++ ++..+||++||+++++||||++++++. +.++|+.|++||+||+||.+|..||.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 5799999999986 789999999999999999999986543 56789999999999999999999995
No 20
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.69 E-value=2e-18 Score=170.02 Aligned_cols=70 Identities=37% Similarity=0.617 Sum_probs=0.0
Q ss_pred CCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCc
Q 048612 3 KETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKY 73 (385)
Q Consensus 3 ~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~ 73 (385)
...|||+||||+++||.+|||+|||+++++||||+|+ ++.++++|++|++||++|+||.+|+.||+++..
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp -----------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCC-ChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 4579999999999999999999999999999999997 467899999999999999999999999998543
No 21
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.68 E-value=2.2e-17 Score=145.85 Aligned_cols=70 Identities=26% Similarity=0.542 Sum_probs=64.0
Q ss_pred CCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------HHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 048612 3 KETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDP------QAAERFQVLGEAYQVLSDPFQREAYDKNGK 72 (385)
Q Consensus 3 ~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~------~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~ 72 (385)
...|||+||||+++++.++||+|||++++++|||++++.+ .+.++|+.|++||++|+||.+|+.||..+.
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 4679999999999999999999999999999999998653 367999999999999999999999998653
No 22
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.68 E-value=1.3e-16 Score=143.36 Aligned_cols=68 Identities=24% Similarity=0.425 Sum_probs=62.2
Q ss_pred CcchhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 048612 5 TEYYDILGVNPSA--SEEEIRKAYYLKARQVHPDKNPNDPQ-----AAERFQVLGEAYQVLSDPFQREAYDKNGK 72 (385)
Q Consensus 5 ~dyY~iLgv~~~a--s~~eIkkaYrkla~~~HPDk~~~~~~-----a~~~f~~I~eAY~vLsd~~~R~~YD~~g~ 72 (385)
+|||+||||++++ +..+||++||+++++||||++++.+. +.++|+.|++||+||+||.+|..||....
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 4899999999999 99999999999999999999987653 45799999999999999999999998643
No 23
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=1.2e-17 Score=134.86 Aligned_cols=62 Identities=32% Similarity=0.527 Sum_probs=58.1
Q ss_pred CCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHH
Q 048612 3 KETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQRE 65 (385)
Q Consensus 3 ~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~ 65 (385)
...|||+||||+++++.++||+|||+++++||||+++ ++.+.++|+.|++||++|+||.+|.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCccccc
Confidence 4689999999999999999999999999999999997 4778899999999999999999875
No 24
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.67 E-value=2.4e-18 Score=144.90 Aligned_cols=87 Identities=23% Similarity=0.404 Sum_probs=70.5
Q ss_pred CCcchhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcccCccCCC
Q 048612 4 ETEYYDILGVNPSASE--EEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSISRETML 81 (385)
Q Consensus 4 ~~dyY~iLgv~~~as~--~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~~~~~~~~ 81 (385)
..+||+||||+++|+. .+||+|||++++++|||++++ .++|+.|++||+||+||.+|+.||.+|...-..
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~~w~~~---- 78 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFWDAT---- 78 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCCCCCC----
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhcccccccc----
Confidence 3589999999999999 999999999999999999974 479999999999999999999999887532211
Q ss_pred ChhhhhhhhhccchHHhhhhHH
Q 048612 82 DPTAVFALLFGSELFEDYIGHL 103 (385)
Q Consensus 82 d~~~~f~~~Fg~~~f~~~~G~l 103 (385)
-...||...|..|.+..
T Consensus 79 -----~~~~~g~p~w~~w~~~~ 95 (114)
T 1gh6_A 79 -----EIPTYGTDEWEQWWNAF 95 (114)
T ss_dssp -----CCCCCSSSCHHHHHHHH
T ss_pred -----cCCCCCCchHHHHHhcc
Confidence 11245666677774333
No 25
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.62 E-value=1.9e-16 Score=124.79 Aligned_cols=65 Identities=15% Similarity=0.212 Sum_probs=57.9
Q ss_pred CcchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcc
Q 048612 5 TEYYDILGVNPS--ASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYS 74 (385)
Q Consensus 5 ~dyY~iLgv~~~--as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~ 74 (385)
.++|+||||+++ ++.++||+|||+++++||||++++ .++|+.|++||++|+|+..|.. +.+|..+
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 479999999999 999999999999999999999863 4789999999999999999988 4466543
No 26
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.60 E-value=1.9e-16 Score=127.37 Aligned_cols=61 Identities=25% Similarity=0.195 Sum_probs=56.5
Q ss_pred CCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHcCChhHH
Q 048612 4 ETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDP-QAAERFQVLGEAYQVLSDPFQR 64 (385)
Q Consensus 4 ~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~-~a~~~f~~I~eAY~vLsd~~~R 64 (385)
..++|+||||+++|+.++||+|||+++++||||++++++ .+.++|+.|++||++|+|...|
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 468999999999999999999999999999999998764 5889999999999999998777
No 27
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.60 E-value=5.4e-17 Score=145.94 Aligned_cols=65 Identities=28% Similarity=0.450 Sum_probs=57.9
Q ss_pred CCcchhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 048612 4 ETEYYDILGVNPSAS--EEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGK 72 (385)
Q Consensus 4 ~~dyY~iLgv~~~as--~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~ 72 (385)
..+||+||||+++|+ .++||+|||++++++|||++++ .++|+.|++||++|+||.+|+.||++|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 368999999999998 6999999999999999999874 3789999999999999999999999996
No 28
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.57 E-value=2.2e-15 Score=136.52 Aligned_cols=65 Identities=26% Similarity=0.502 Sum_probs=59.4
Q ss_pred CCcchhhc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcC
Q 048612 4 ETEYYDIL------GVNP-SASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNG 71 (385)
Q Consensus 4 ~~dyY~iL------gv~~-~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g 71 (385)
.+|||+|| |+++ +++..+||++||+++++||||++++ +.++|+.|++||+||+||.+|..||...
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 57999999 4665 8999999999999999999999975 6789999999999999999999999843
No 29
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.56 E-value=5.1e-16 Score=125.78 Aligned_cols=56 Identities=23% Similarity=0.382 Sum_probs=51.8
Q ss_pred CcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHHHHHHHcCC
Q 048612 5 TEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDP---QAAERFQVLGEAYQVLSD 60 (385)
Q Consensus 5 ~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~---~a~~~f~~I~eAY~vLsd 60 (385)
.++|++|||+++||.++||+|||+++++||||+|++++ .++++|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999999999999999998765 378999999999999964
No 30
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.55 E-value=5.5e-16 Score=140.22 Aligned_cols=63 Identities=25% Similarity=0.414 Sum_probs=58.7
Q ss_pred CcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH---HHHHHHHHHHHHHHcCChhHHHHH
Q 048612 5 TEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQ---AAERFQVLGEAYQVLSDPFQREAY 67 (385)
Q Consensus 5 ~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~---a~~~f~~I~eAY~vLsd~~~R~~Y 67 (385)
.+||+||||+++|+.++||+|||+++++||||++++.+. +.++|+.|++||+||+||.+|..|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 689999999999999999999999999999999986553 889999999999999999999876
No 31
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.54 E-value=6.7e-16 Score=166.49 Aligned_cols=75 Identities=41% Similarity=0.716 Sum_probs=40.9
Q ss_pred CCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcccCc
Q 048612 3 KETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSISR 77 (385)
Q Consensus 3 ~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~~~~ 77 (385)
.+.|||+||||+++||.++||+|||+++++||||++++++.+.++|+.|++||++|+||.+|+.||++|..+...
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 468999999999999999999999999999999999888889999999999999999999999999999877543
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.53 E-value=1.9e-15 Score=125.57 Aligned_cols=59 Identities=20% Similarity=0.278 Sum_probs=52.5
Q ss_pred CCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---Ch----HHHHHHHHHHHHHHHcCChh
Q 048612 3 KETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPN---DP----QAAERFQVLGEAYQVLSDPF 62 (385)
Q Consensus 3 ~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~---~~----~a~~~f~~I~eAY~vLsd~~ 62 (385)
.+.|||+|||+++ ||.++||+|||+++++|||||+++ ++ .|+++|+.|++||++|+|+.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 4579999999996 999999999999999999999863 12 46899999999999999985
No 33
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.48 E-value=8.5e-15 Score=112.98 Aligned_cols=57 Identities=19% Similarity=0.203 Sum_probs=51.1
Q ss_pred CCcchhhcCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHH
Q 048612 4 ETEYYDILGVNP-SASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQR 64 (385)
Q Consensus 4 ~~dyY~iLgv~~-~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R 64 (385)
..++|+||||++ +++.++||+|||+++++||||+++ ++ +.|+.|++||++|+|+..|
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~~---~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-SP---FLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-CH---HHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CH---HHHHHHHHHHHHHhhhhhc
Confidence 358999999999 799999999999999999999974 43 5999999999999998665
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.90 E-value=8.2e-10 Score=107.72 Aligned_cols=66 Identities=42% Similarity=0.640 Sum_probs=56.2
Q ss_pred CCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hHHHHHHHHHHHHHHHcCChhHHHHHhh
Q 048612 4 ETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPND---PQAAERFQVLGEAYQVLSDPFQREAYDK 69 (385)
Q Consensus 4 ~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~---~~a~~~f~~I~eAY~vLsd~~~R~~YD~ 69 (385)
..++|.+||+.++++..+|+++|+++++++|||+.+.+ ..+.+.|+.|++||++|+||.+|..||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 35899999999999999999999999999999999753 2488999999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.45 E-value=1.3e-07 Score=71.58 Aligned_cols=53 Identities=15% Similarity=0.044 Sum_probs=45.3
Q ss_pred CcchhhcCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCCh
Q 048612 5 TEYYDILGVNPS---ASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDP 61 (385)
Q Consensus 5 ~dyY~iLgv~~~---as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~ 61 (385)
.+-|.||||+++ ++.++|+++||+|...+|||+.+ .+ -....|++|+++|...
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG-S~---yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG-SF---YLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC-CH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC-CH---HHHHHHHHHHHHHHHH
Confidence 345889999999 99999999999999999999974 33 5678899999998643
No 36
>3cjl_A Domain of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Pectobacterium atrosepticum SCRI1043}
Probab=29.71 E-value=90 Score=24.34 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=27.2
Q ss_pred HHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 048612 283 VCQMVLKENNVRKEELKARAVALKTLGKIFQDK 315 (385)
Q Consensus 283 Vc~kVL~D~~V~~e~R~kRA~aL~~LG~if~~~ 315 (385)
+.++|=.+.+.+.++...=|-||+++|.+|.+-
T Consensus 33 Ive~~~~~~~~~~~~a~af~vGLKLfgevml~~ 65 (88)
T 3cjl_A 33 LLEKVDGKMDMTPEQTQAFMVGLKLFGEVMMQQ 65 (88)
T ss_dssp HHHHHTTTSSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 445555667789999999999999999999864
No 37
>1ceu_A Protein (HIV-1 regulatory protein N-terminal domain VPR); helical domain, amphipaticity, viral protein; NMR {Synthetic} SCOP: j.11.1.1 PDB: 1fi0_A
Probab=27.22 E-value=68 Score=22.50 Aligned_cols=29 Identities=21% Similarity=0.182 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhHhhhccchHHHHHHHHH
Q 048612 157 DGFLQRAESEGKRMSAVAFGVDILHTIGY 185 (385)
Q Consensus 157 ~~f~~~~~~Ea~~L~~~sfG~~iL~~IG~ 185 (385)
+.|...+..|++.=+.-.|...+|+.+|.
T Consensus 16 ~eW~le~LeElk~EAvrHFpr~~L~~lgq 44 (51)
T 1ceu_A 16 NDWTLELLEELKNEAVRHFPRIWLHSLGQ 44 (51)
T ss_dssp SHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 36888888999988889999999999995
No 38
>2qzg_A Conserved uncharacterized archaeal protein; unknown function protein, structu genomics, PSI-2, protein structure initiative; 2.09A {Methanococcus maripaludis S2} SCOP: a.29.14.1
Probab=27.07 E-value=25 Score=27.80 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHH---HHhcccCCCCHHHHHHHHHHHHHH
Q 048612 273 VVDIEVTLLHVC---QMVLKENNVRKEELKARAVALKTL 308 (385)
Q Consensus 273 ~~DIe~Tlr~Vc---~kVL~D~~V~~e~R~kRA~aL~~L 308 (385)
+.+-|.++++++ +.|.+|.+||...|+.=.++...|
T Consensus 9 ~~e~e~~ik~~~~~L~~I~~D~sVPRNIRraA~ea~~~L 47 (94)
T 2qzg_A 9 KLSPADKLKNISSMLEEIVEDTTVPRNIRAAADNAKNAL 47 (94)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHT
T ss_pred hcchHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHH
Confidence 334444444443 355678888888888766666554
No 39
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=20.26 E-value=1.7e+02 Score=23.89 Aligned_cols=52 Identities=21% Similarity=0.183 Sum_probs=28.1
Q ss_pred CCCCCCCHH-HHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcC
Q 048612 12 GVNPSASEE-EIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNG 71 (385)
Q Consensus 12 gv~~~as~~-eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g 71 (385)
|++|+.... +|-+.++.....+.++..+ +.|..|.+-| +.||.-+..||++|
T Consensus 71 g~~p~s~eaq~l~~~h~~~l~~~~~~~s~------e~~~~L~~mY--v~D~rF~~~~d~~~ 123 (143)
T 1ny9_A 71 GEPADSEGAMDAAEDHRQGIARNHYDCGY------EMHTCLGEMY--VSDERFTRNIDAAK 123 (143)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHHSSCCCH------HHHHHHHHHT--TSTHHHHHHHGGGS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHH--hcCHHHHHhHcccC
Confidence 444543222 3444455544343444332 5566666666 46787788888764
Done!