Query 048614
Match_columns 165
No_of_seqs 109 out of 338
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 11:12:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048614.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048614hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK12396 5-methylribose kinase 100.0 1.7E-48 3.8E-53 337.9 13.8 156 2-164 3-161 (409)
2 TIGR01767 MTRK 5-methylthiorib 100.0 1.1E-41 2.3E-46 292.7 11.9 126 38-164 1-128 (370)
3 PRK09550 mtnK methylthioribose 100.0 6E-40 1.3E-44 285.4 18.0 156 3-164 1-159 (401)
4 PLN02756 S-methyl-5-thioribose 100.0 7.5E-40 1.6E-44 285.1 16.5 164 1-164 1-164 (418)
5 COG4857 Predicted kinase [Gene 100.0 2.1E-40 4.5E-45 275.9 8.2 138 27-165 25-164 (408)
6 COG3642 Mn2+-dependent serine/ 99.3 2E-11 4.3E-16 97.1 9.2 101 46-151 10-111 (204)
7 cd05151 ChoK Choline Kinase (C 99.2 3.9E-10 8.4E-15 85.0 10.1 102 36-152 2-103 (170)
8 cd05154 ACAD10_11_like Acyl-Co 99.1 7E-10 1.5E-14 86.5 9.8 111 35-154 1-121 (223)
9 KOG3087 Serine/threonine prote 98.9 5.1E-09 1.1E-13 83.8 9.1 114 36-151 11-132 (229)
10 TIGR03724 arch_bud32 Kae1-asso 98.9 9.8E-09 2.1E-13 79.7 9.5 108 40-152 2-110 (199)
11 PF01636 APH: Phosphotransfera 98.8 1.4E-08 3.1E-13 79.0 7.1 104 36-152 1-109 (239)
12 cd05150 APH Aminoglycoside 3'- 98.7 1.1E-07 2.3E-12 76.6 10.4 101 37-152 3-106 (244)
13 PRK05231 homoserine kinase; Pr 98.7 3E-07 6.5E-12 76.8 12.6 129 4-159 2-138 (319)
14 PRK14879 serine/threonine prot 98.7 1.1E-07 2.4E-12 74.3 9.4 112 38-152 2-115 (211)
15 cd05157 ETNK_euk Ethanolamine 98.7 2.3E-07 5.1E-12 74.0 11.2 105 35-156 1-108 (235)
16 PF03881 Fructosamin_kin: Fruc 98.7 1.8E-07 3.8E-12 78.8 10.5 97 33-150 18-116 (288)
17 cd05120 APH_ChoK_like Aminogly 98.7 1.6E-07 3.6E-12 67.5 8.8 103 36-152 2-106 (155)
18 TIGR00938 thrB_alt homoserine 98.7 4.4E-07 9.5E-12 75.8 12.3 127 5-158 3-138 (307)
19 PLN02876 acyl-CoA dehydrogenas 98.6 5.9E-07 1.3E-11 84.9 13.5 135 8-154 17-164 (822)
20 PRK10593 hypothetical protein; 98.6 1.4E-07 3E-12 79.2 7.8 108 35-153 17-129 (297)
21 TIGR02721 ycfN_thiK thiamine k 98.6 2.8E-07 6.1E-12 74.9 9.0 101 37-153 1-101 (256)
22 cd05153 HomoserineK_II Homoser 98.6 6.5E-07 1.4E-11 73.9 10.3 120 12-158 2-129 (296)
23 cd05156 ChoK_euk Choline Kinas 98.5 4.1E-07 8.9E-12 75.5 8.4 104 35-155 1-112 (302)
24 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 1.5E-06 3.2E-11 70.4 8.8 102 37-151 6-110 (226)
25 cd05155 APH_ChoK_like_1 Unchar 98.4 1.4E-06 3.1E-11 70.0 8.3 102 37-154 2-109 (235)
26 PRK01723 3-deoxy-D-manno-octul 98.4 7.8E-06 1.7E-10 66.7 11.7 114 37-152 36-162 (239)
27 cd05152 MPH2' Macrolide 2'-Pho 98.3 6.7E-06 1.4E-10 68.5 10.2 106 34-153 13-130 (276)
28 COG3173 Predicted aminoglycosi 98.2 1.6E-05 3.4E-10 68.1 10.3 131 7-152 6-141 (321)
29 PRK09605 bifunctional UGMP fam 98.1 1.2E-05 2.6E-10 72.4 9.2 110 37-152 338-448 (535)
30 PRK10359 lipopolysaccharide co 98.1 4E-05 8.7E-10 62.8 11.3 107 36-152 35-155 (232)
31 PLN02236 choline kinase 98.0 3E-05 6.6E-10 66.4 8.8 123 11-152 16-145 (344)
32 PLN02421 phosphotransferase, a 98.0 4.8E-05 1E-09 64.8 9.1 105 31-152 13-122 (330)
33 PF06293 Kdo: Lipopolysacchari 97.9 0.00011 2.5E-09 58.3 10.5 94 57-152 34-138 (206)
34 COG3001 Uncharacterized protei 97.9 0.0001 2.2E-09 61.2 9.9 99 33-153 17-118 (286)
35 PRK15123 lipopolysaccharide co 97.9 0.0002 4.4E-09 59.7 11.0 111 37-152 30-158 (268)
36 COG2334 Putative homoserine ki 97.8 0.00022 4.8E-09 61.3 10.9 131 2-158 4-144 (331)
37 cd05145 RIO1_like RIO kinase f 97.8 0.0004 8.6E-09 54.1 10.7 109 38-150 3-135 (190)
38 PTZ00384 choline kinase; Provi 97.7 0.00041 9E-09 60.6 11.0 126 12-152 32-161 (383)
39 PF02958 EcKinase: Ecdysteroid 97.7 0.00014 2.9E-09 60.1 7.4 109 41-154 2-133 (294)
40 PRK11768 serine/threonine prot 97.6 0.0013 2.7E-08 55.9 12.3 125 5-155 7-139 (325)
41 PF01163 RIO1: RIO1 family; I 97.6 0.00022 4.7E-09 56.6 7.1 99 48-149 2-123 (188)
42 PRK09902 hypothetical protein; 97.6 0.0018 3.8E-08 52.7 12.0 106 43-152 29-148 (216)
43 PRK06148 hypothetical protein; 97.6 0.002 4.3E-08 62.7 14.1 128 8-159 10-152 (1013)
44 smart00090 RIO RIO-like kinase 97.5 0.001 2.2E-08 54.1 9.8 110 38-152 34-168 (237)
45 cd05147 RIO1_euk RIO kinase fa 97.4 0.002 4.4E-08 50.5 10.5 109 38-151 3-137 (190)
46 cd05069 PTKc_Yes Catalytic dom 97.4 0.0039 8.4E-08 49.7 12.2 105 36-152 10-122 (260)
47 PF04655 APH_6_hur: Aminoglyco 97.4 0.00061 1.3E-08 56.5 7.3 101 39-153 9-110 (253)
48 TIGR02906 spore_CotS spore coa 97.3 0.0025 5.5E-08 52.6 10.4 92 47-158 11-110 (313)
49 PTZ00296 choline kinase; Provi 97.3 0.0017 3.7E-08 57.8 9.7 105 31-152 104-218 (442)
50 cd05119 RIO RIO kinase family, 97.2 0.0052 1.1E-07 46.8 10.4 109 38-150 3-132 (187)
51 cd05146 RIO3_euk RIO kinase fa 97.2 0.00084 1.8E-08 53.7 6.1 66 83-151 75-144 (197)
52 cd05070 PTKc_Fyn_Yrk Catalytic 97.1 0.012 2.6E-07 46.7 11.7 105 36-152 10-122 (260)
53 PRK06149 hypothetical protein; 97.1 0.011 2.3E-07 57.5 13.2 128 8-159 16-156 (972)
54 cd05071 PTKc_Src Catalytic dom 97.0 0.018 3.9E-07 46.0 12.2 105 36-152 10-122 (262)
55 cd05144 RIO2_C RIO kinase fami 96.9 0.011 2.3E-07 46.1 9.8 110 37-152 20-145 (198)
56 cd05082 PTKc_Csk Catalytic dom 96.9 0.022 4.8E-07 45.0 11.6 104 36-152 10-122 (256)
57 cd05587 STKc_cPKC Catalytic do 96.9 0.017 3.6E-07 48.0 11.0 108 37-152 5-121 (324)
58 cd00180 PKc Catalytic domain o 96.9 0.027 5.9E-07 41.6 11.0 101 40-151 1-111 (215)
59 PRK09188 serine/threonine prot 96.8 0.015 3.3E-07 50.6 10.9 106 36-151 22-130 (365)
60 TIGR01982 UbiB 2-polyprenylphe 96.8 0.0069 1.5E-07 53.7 8.8 116 34-151 119-276 (437)
61 PRK12274 serine/threonine prot 96.8 0.013 2.8E-07 47.8 9.6 104 36-152 6-111 (218)
62 cd05039 PTKc_Csk_like Catalyti 96.8 0.02 4.3E-07 45.2 10.7 105 36-152 10-122 (256)
63 cd05115 PTKc_Zap-70 Catalytic 96.8 0.024 5.2E-07 45.2 11.2 104 39-152 2-115 (257)
64 cd05629 STKc_NDR_like_fungal C 96.8 0.018 3.9E-07 48.9 10.6 108 36-152 5-121 (377)
65 cd05073 PTKc_Hck Catalytic dom 96.7 0.033 7.1E-07 44.3 11.4 105 36-152 10-122 (260)
66 cd05589 STKc_PKN Catalytic dom 96.7 0.025 5.5E-07 46.9 11.1 110 37-152 4-121 (324)
67 cd05591 STKc_nPKC_epsilon Cata 96.7 0.024 5.2E-07 47.0 10.8 106 39-152 2-116 (321)
68 cd05598 STKc_LATS Catalytic do 96.7 0.033 7.1E-07 47.2 11.4 108 36-152 5-121 (376)
69 cd05114 PTKc_Tec_Rlk Catalytic 96.6 0.059 1.3E-06 42.6 12.2 105 36-152 8-120 (256)
70 cd05616 STKc_cPKC_beta Catalyt 96.6 0.028 6E-07 46.6 10.7 108 37-152 5-121 (323)
71 cd05600 STKc_Sid2p_Dbf2p Catal 96.6 0.032 7E-07 46.4 11.0 109 36-152 5-121 (333)
72 cd05599 STKc_NDR_like Catalyti 96.6 0.031 6.7E-07 47.0 10.7 108 36-152 5-121 (364)
73 cd05615 STKc_cPKC_alpha Cataly 96.6 0.029 6.3E-07 46.7 10.4 108 37-152 5-121 (323)
74 cd05580 STKc_PKA Catalytic dom 96.6 0.039 8.4E-07 44.7 10.8 106 37-151 6-120 (290)
75 cd07862 STKc_CDK6 Catalytic do 96.6 0.084 1.8E-06 42.5 12.7 108 37-152 6-130 (290)
76 cd05072 PTKc_Lyn Catalytic dom 96.6 0.06 1.3E-06 42.6 11.7 105 36-152 10-123 (261)
77 cd05633 STKc_GRK3 Catalytic do 96.6 0.053 1.1E-06 43.9 11.6 107 40-152 2-117 (279)
78 cd05613 STKc_MSK1_N N-terminal 96.5 0.049 1.1E-06 44.0 11.3 110 37-152 5-125 (290)
79 cd06631 STKc_YSK4 Catalytic do 96.5 0.032 6.9E-07 44.3 10.0 110 37-152 5-122 (265)
80 cd05619 STKc_nPKC_theta Cataly 96.5 0.046 1E-06 45.4 11.1 106 39-152 2-116 (316)
81 cd05614 STKc_MSK2_N N-terminal 96.5 0.039 8.5E-07 45.8 10.6 110 36-152 4-125 (332)
82 cd05593 STKc_PKB_gamma Catalyt 96.5 0.04 8.6E-07 46.0 10.6 106 39-152 2-115 (328)
83 cd05595 STKc_PKB_beta Catalyti 96.5 0.035 7.5E-07 46.2 10.2 106 39-152 2-115 (323)
84 cd06638 STKc_myosinIIIA Cataly 96.4 0.073 1.6E-06 42.7 11.6 108 32-151 17-143 (286)
85 cd05584 STKc_p70S6K Catalytic 96.4 0.038 8.1E-07 45.9 10.1 109 37-152 1-120 (323)
86 cd05083 PTKc_Chk Catalytic dom 96.4 0.071 1.5E-06 42.1 11.3 103 37-152 11-120 (254)
87 cd05084 PTKc_Fes Catalytic dom 96.4 0.05 1.1E-06 42.8 10.4 104 38-152 1-114 (252)
88 cd05571 STKc_PKB Catalytic dom 96.4 0.043 9.3E-07 45.6 10.4 106 39-152 2-115 (323)
89 cd06654 STKc_PAK1 Catalytic do 96.4 0.14 3E-06 41.8 13.3 111 31-152 18-136 (296)
90 PTZ00263 protein kinase A cata 96.4 0.056 1.2E-06 45.1 11.1 108 36-152 22-138 (329)
91 cd06917 STKc_NAK1_like Catalyt 96.4 0.092 2E-06 41.9 11.9 108 37-152 6-121 (277)
92 cd07837 STKc_CdkB_plant Cataly 96.4 0.09 2E-06 42.4 11.9 107 36-152 5-130 (295)
93 cd05113 PTKc_Btk_Bmx Catalytic 96.4 0.094 2E-06 41.7 11.8 104 36-152 8-120 (256)
94 cd05627 STKc_NDR2 Catalytic do 96.4 0.055 1.2E-06 45.6 11.0 108 36-152 5-121 (360)
95 smart00219 TyrKc Tyrosine kina 96.4 0.053 1.1E-06 42.4 10.2 105 37-152 4-123 (258)
96 PHA02988 hypothetical protein; 96.4 0.038 8.3E-07 45.1 9.7 107 36-151 24-141 (283)
97 cd05590 STKc_nPKC_eta Catalyti 96.3 0.049 1.1E-06 45.2 10.4 106 39-152 2-116 (320)
98 cd05617 STKc_aPKC_zeta Catalyt 96.3 0.039 8.5E-07 46.0 9.8 106 39-152 2-116 (327)
99 cd05067 PTKc_Lck_Blk Catalytic 96.3 0.094 2E-06 41.5 11.6 105 36-152 10-122 (260)
100 cd06649 PKc_MEK2 Catalytic dom 96.3 0.075 1.6E-06 44.3 11.4 105 36-151 9-122 (331)
101 cd05068 PTKc_Frk_like Catalyti 96.3 0.077 1.7E-06 42.1 11.0 104 36-152 10-123 (261)
102 cd06640 STKc_MST4 Catalytic do 96.3 0.051 1.1E-06 43.6 10.1 106 36-152 8-121 (277)
103 cd05573 STKc_ROCK_NDR_like Cat 96.3 0.036 7.9E-07 46.1 9.3 107 36-151 5-120 (350)
104 cd06610 STKc_OSR1_SPAK Catalyt 96.3 0.081 1.8E-06 41.6 10.9 105 37-152 6-122 (267)
105 cd05034 PTKc_Src_like Catalyti 96.3 0.12 2.6E-06 40.8 11.9 103 37-152 11-123 (261)
106 cd05570 STKc_PKC Catalytic dom 96.3 0.047 1E-06 45.2 9.9 106 39-152 2-116 (318)
107 cd05585 STKc_YPK1_like Catalyt 96.3 0.053 1.1E-06 44.7 10.0 105 40-152 1-113 (312)
108 cd05628 STKc_NDR1 Catalytic do 96.2 0.066 1.4E-06 45.3 10.8 109 36-152 5-121 (363)
109 cd05620 STKc_nPKC_delta Cataly 96.2 0.065 1.4E-06 44.4 10.6 106 39-152 2-116 (316)
110 cd05085 PTKc_Fer Catalytic dom 96.2 0.11 2.5E-06 40.6 11.5 104 39-152 2-113 (250)
111 cd06611 STKc_SLK_like Catalyti 96.2 0.043 9.3E-07 44.0 9.1 104 36-151 9-122 (280)
112 cd07861 STKc_CDK1_euk Catalyti 96.2 0.12 2.7E-06 41.2 11.8 106 36-152 4-121 (285)
113 cd08228 STKc_Nek6 Catalytic do 96.2 0.079 1.7E-06 42.0 10.5 108 37-152 7-126 (267)
114 cd08215 STKc_Nek Catalytic dom 96.2 0.092 2E-06 40.8 10.7 107 37-152 5-123 (258)
115 cd06606 STKc_MAPKKK Catalytic 96.2 0.11 2.3E-06 40.3 11.0 106 37-151 5-120 (260)
116 KOG4250 TANK binding protein k 96.2 0.013 2.8E-07 54.8 6.4 107 32-149 12-137 (732)
117 cd07871 STKc_PCTAIRE3 Catalyti 96.2 0.15 3.2E-06 41.4 12.2 105 36-152 9-123 (288)
118 cd05592 STKc_nPKC_theta_delta 96.2 0.072 1.6E-06 44.2 10.5 106 39-152 2-116 (316)
119 cd05059 PTKc_Tec_like Catalyti 96.2 0.091 2E-06 41.6 10.7 104 36-152 8-120 (256)
120 cd05582 STKc_RSK_N N-terminal 96.1 0.079 1.7E-06 43.7 10.5 105 38-152 2-118 (318)
121 cd05038 PTKc_Jak_rpt2 Catalyti 96.1 0.095 2.1E-06 41.7 10.6 105 37-152 9-129 (284)
122 cd07859 STKc_TDY_MAPK_plant Ca 96.1 0.089 1.9E-06 43.3 10.7 105 37-152 5-123 (338)
123 cd05612 STKc_PRKX_like Catalyt 96.1 0.039 8.3E-07 45.0 8.4 108 36-152 5-121 (291)
124 cd06615 PKc_MEK Catalytic doma 96.1 0.1 2.3E-06 42.8 11.0 105 36-150 5-117 (308)
125 cd05618 STKc_aPKC_iota Catalyt 96.1 0.087 1.9E-06 44.0 10.5 106 39-152 2-116 (329)
126 cd05079 PTKc_Jak1_rpt2 Catalyt 96.0 0.12 2.6E-06 41.7 11.0 107 36-152 8-129 (284)
127 cd05609 STKc_MAST Catalytic do 96.0 0.13 2.7E-06 42.1 11.2 108 36-152 5-121 (305)
128 cd05626 STKc_LATS2 Catalytic d 96.0 0.078 1.7E-06 45.2 10.3 108 36-152 5-121 (381)
129 cd05588 STKc_aPKC Catalytic do 96.0 0.094 2E-06 43.7 10.6 106 39-152 2-116 (329)
130 cd05037 PTK_Jak_rpt1 Pseudokin 96.0 0.094 2E-06 41.1 10.1 102 39-152 2-121 (259)
131 cd07863 STKc_CDK4 Catalytic do 96.0 0.21 4.6E-06 40.0 12.3 108 37-152 5-128 (288)
132 cd05583 STKc_MSK_N N-terminal 96.0 0.067 1.4E-06 43.1 9.3 109 37-151 5-124 (288)
133 TIGR02904 spore_ysxE spore coa 96.0 0.1 2.2E-06 43.6 10.5 100 36-156 11-118 (309)
134 cd05096 PTKc_DDR1 Catalytic do 96.0 0.11 2.5E-06 42.3 10.6 106 36-152 9-158 (304)
135 cd05041 PTKc_Fes_like Catalyti 96.0 0.13 2.9E-06 40.2 10.7 103 39-152 2-113 (251)
136 cd06652 STKc_MEKK2 Catalytic d 95.9 0.16 3.5E-06 40.3 11.1 109 37-152 7-126 (265)
137 cd07836 STKc_Pho85 Catalytic d 95.9 0.22 4.7E-06 39.8 11.9 105 36-152 4-120 (284)
138 cd07831 STKc_MOK Catalytic dom 95.9 0.26 5.5E-06 39.3 12.1 105 37-152 4-120 (282)
139 cd00192 PTKc Catalytic domain 95.9 0.16 3.5E-06 39.5 10.7 103 39-152 2-125 (262)
140 cd08529 STKc_FA2-like Catalyti 95.9 0.12 2.6E-06 40.5 10.0 107 37-152 5-121 (256)
141 cd06650 PKc_MEK1 Catalytic dom 95.8 0.15 3.2E-06 42.6 11.0 104 36-150 9-121 (333)
142 cd05116 PTKc_Syk Catalytic dom 95.8 0.16 3.4E-06 40.2 10.6 105 39-152 2-115 (257)
143 cd05608 STKc_GRK1 Catalytic do 95.8 0.072 1.6E-06 43.1 8.8 105 40-152 1-117 (280)
144 cd08220 STKc_Nek8 Catalytic do 95.8 0.21 4.6E-06 39.0 11.2 107 36-151 4-120 (256)
145 cd05057 PTKc_EGFR_like Catalyt 95.8 0.12 2.6E-06 41.4 10.0 107 36-152 11-129 (279)
146 cd05603 STKc_SGK2 Catalytic do 95.8 0.13 2.8E-06 42.5 10.3 106 39-152 2-116 (321)
147 cd07848 STKc_CDKL5 Catalytic d 95.8 0.26 5.6E-06 39.6 11.9 107 37-152 6-120 (287)
148 KOG0610 Putative serine/threon 95.8 0.016 3.6E-07 51.3 5.1 80 36-126 81-169 (459)
149 cd06642 STKc_STK25-YSK1 Cataly 95.8 0.071 1.5E-06 42.7 8.5 107 36-152 8-121 (277)
150 cd08224 STKc_Nek6_Nek7 Catalyt 95.8 0.11 2.4E-06 40.9 9.5 107 37-152 7-126 (267)
151 COG2112 Predicted Ser/Thr prot 95.8 0.026 5.6E-07 45.2 5.7 76 36-126 26-101 (201)
152 cd06651 STKc_MEKK3 Catalytic d 95.7 0.16 3.4E-06 40.5 10.4 110 36-152 6-126 (266)
153 cd06630 STKc_MEKK1 Catalytic d 95.7 0.11 2.5E-06 41.0 9.5 109 38-152 6-123 (268)
154 cd07880 STKc_p38gamma_MAPK12 C 95.7 0.26 5.7E-06 41.3 12.1 107 36-152 19-138 (343)
155 cd05090 PTKc_Ror1 Catalytic do 95.7 0.1 2.2E-06 41.9 9.3 104 38-152 11-144 (283)
156 cd06623 PKc_MAPKK_plant_like C 95.7 0.21 4.5E-06 39.2 10.8 103 37-150 6-117 (264)
157 cd05112 PTKc_Itk Catalytic dom 95.7 0.33 7.2E-06 38.1 12.0 104 36-151 8-119 (256)
158 cd05594 STKc_PKB_alpha Catalyt 95.7 0.15 3.3E-06 42.2 10.5 103 39-150 2-113 (325)
159 cd07832 STKc_CCRK Catalytic do 95.7 0.3 6.5E-06 38.9 11.9 105 37-152 5-119 (286)
160 cd07872 STKc_PCTAIRE2 Catalyti 95.7 0.37 8E-06 39.4 12.6 105 36-152 10-124 (309)
161 cd06641 STKc_MST3 Catalytic do 95.7 0.23 5E-06 39.8 11.2 107 36-152 8-121 (277)
162 cd07853 STKc_NLK Catalytic dom 95.7 0.14 3E-06 43.3 10.3 106 37-152 5-123 (372)
163 cd07873 STKc_PCTAIRE1 Catalyti 95.7 0.36 7.8E-06 39.2 12.4 105 36-152 10-124 (301)
164 cd05036 PTKc_ALK_LTK Catalytic 95.6 0.2 4.3E-06 40.2 10.7 106 36-152 10-136 (277)
165 cd05574 STKc_phototropin_like 95.6 0.25 5.5E-06 40.4 11.5 107 37-152 6-123 (316)
166 cd05060 PTKc_Syk_like Catalyti 95.6 0.22 4.8E-06 39.3 10.8 104 39-152 2-115 (257)
167 cd05596 STKc_ROCK Catalytic do 95.6 0.23 5.1E-06 42.3 11.5 112 33-152 43-162 (370)
168 cd05056 PTKc_FAK Catalytic dom 95.6 0.28 6E-06 39.0 11.3 106 37-152 11-127 (270)
169 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 95.6 0.22 4.9E-06 39.9 10.8 105 36-152 8-128 (284)
170 cd05108 PTKc_EGFR Catalytic do 95.6 0.17 3.8E-06 41.6 10.4 107 36-152 11-129 (316)
171 PTZ00426 cAMP-dependent protei 95.6 0.19 4E-06 42.4 10.7 111 34-152 31-151 (340)
172 cd07841 STKc_CDK7 Catalytic do 95.6 0.15 3.3E-06 41.2 9.8 109 37-152 5-122 (298)
173 cd08530 STKc_CNK2-like Catalyt 95.6 0.11 2.4E-06 40.6 8.8 106 37-152 5-123 (256)
174 PF00069 Pkinase: Protein kina 95.6 0.11 2.3E-06 40.7 8.7 106 37-152 4-118 (260)
175 cd06620 PKc_MAPKK_Byr1_like Ca 95.6 0.16 3.4E-06 41.0 9.9 105 36-150 9-121 (284)
176 cd05622 STKc_ROCK1 Catalytic d 95.6 0.21 4.5E-06 42.7 11.1 113 32-152 42-162 (371)
177 cd06632 STKc_MEKK1_plant Catal 95.6 0.23 5.1E-06 38.8 10.6 108 38-152 6-122 (258)
178 cd06609 STKc_MST3_like Catalyt 95.6 0.26 5.6E-06 39.3 11.1 106 37-152 6-118 (274)
179 cd07847 STKc_CDKL1_4 Catalytic 95.6 0.36 7.8E-06 38.5 11.9 107 37-152 6-120 (286)
180 cd05102 PTKc_VEGFR3 Catalytic 95.6 0.15 3.2E-06 42.4 9.9 84 37-130 12-105 (338)
181 cd07844 STKc_PCTAIRE_like Cata 95.6 0.33 7.1E-06 39.1 11.7 105 36-152 9-123 (291)
182 cd05607 STKc_GRK7 Catalytic do 95.6 0.25 5.4E-06 39.8 11.0 104 40-152 1-115 (277)
183 COG0478 RIO-like serine/threon 95.6 0.067 1.5E-06 45.4 7.7 107 38-149 97-219 (304)
184 cd07869 STKc_PFTAIRE1 Catalyti 95.5 0.44 9.5E-06 38.8 12.5 106 36-152 9-123 (303)
185 cd05118 STKc_CMGC Catalytic do 95.5 0.23 5E-06 39.5 10.6 105 37-152 4-118 (283)
186 cd05052 PTKc_Abl Catalytic dom 95.5 0.33 7.1E-06 38.5 11.5 105 36-152 10-124 (263)
187 cd05577 STKc_GRK Catalytic dom 95.5 0.27 5.8E-06 39.4 11.1 105 40-152 1-115 (277)
188 cd06648 STKc_PAK_II Catalytic 95.5 0.39 8.5E-06 38.9 12.1 105 36-152 23-135 (285)
189 cd07860 STKc_CDK2_3 Catalytic 95.5 0.28 6E-06 39.3 10.9 106 36-152 4-120 (284)
190 PLN00009 cyclin-dependent kina 95.5 0.43 9.3E-06 38.5 12.1 106 36-152 6-122 (294)
191 cd06639 STKc_myosinIIIB Cataly 95.5 0.57 1.2E-05 37.7 12.8 109 32-152 21-148 (291)
192 cd06627 STKc_Cdc7_like Catalyt 95.4 0.38 8.3E-06 37.4 11.4 107 37-152 5-119 (254)
193 cd06655 STKc_PAK2 Catalytic do 95.4 0.72 1.6E-05 37.6 13.4 106 36-152 23-135 (296)
194 cd06656 STKc_PAK3 Catalytic do 95.4 0.36 7.8E-06 39.4 11.6 106 36-152 23-135 (297)
195 cd05621 STKc_ROCK2 Catalytic d 95.4 0.24 5.3E-06 42.3 11.0 113 32-152 42-162 (370)
196 cd05606 STKc_beta_ARK Catalyti 95.4 0.3 6.6E-06 39.4 11.0 107 40-152 2-117 (278)
197 cd06657 STKc_PAK4 Catalytic do 95.4 0.32 7E-06 39.7 11.2 105 37-152 25-136 (292)
198 cd05148 PTKc_Srm_Brk Catalytic 95.4 0.22 4.8E-06 39.2 10.0 104 37-152 11-124 (261)
199 cd07840 STKc_CDK9_like Catalyt 95.4 0.51 1.1E-05 37.5 12.1 106 37-152 4-120 (287)
200 cd06653 STKc_MEKK3_like_1 Cata 95.4 0.37 7.9E-06 38.3 11.2 109 37-152 7-126 (264)
201 cd06626 STKc_MEKK4 Catalytic d 95.3 0.36 7.9E-06 37.9 11.0 106 37-152 5-119 (264)
202 cd08219 STKc_Nek3 Catalytic do 95.3 0.42 9E-06 37.6 11.4 105 37-152 5-120 (255)
203 cd05048 PTKc_Ror Catalytic Dom 95.3 0.22 4.8E-06 39.8 9.9 106 36-152 9-144 (283)
204 cd07845 STKc_CDK10 Catalytic d 95.3 0.43 9.4E-06 38.9 11.8 109 33-152 7-128 (309)
205 cd06605 PKc_MAPKK Catalytic do 95.3 0.09 2E-06 41.5 7.5 104 37-150 6-118 (265)
206 PHA03212 serine/threonine kina 95.3 0.36 7.8E-06 41.7 11.8 98 36-152 96-202 (391)
207 cd05122 PKc_STE Catalytic doma 95.3 0.31 6.6E-06 37.5 10.3 103 37-151 5-117 (253)
208 cd05604 STKc_SGK3 Catalytic do 95.3 0.29 6.2E-06 40.6 10.7 106 39-152 2-116 (325)
209 cd06646 STKc_MAP4K5 Catalytic 95.3 0.38 8.2E-06 38.1 11.0 106 36-152 13-126 (267)
210 cd05586 STKc_Sck1_like Catalyt 95.3 0.31 6.7E-06 40.4 10.8 106 40-152 1-116 (330)
211 KOG3021 Predicted kinase [Gene 95.3 0.071 1.5E-06 44.3 6.7 88 41-152 21-113 (313)
212 cd05087 PTKc_Aatyk1_Aatyk3 Cat 95.2 0.18 3.9E-06 40.2 9.1 103 39-152 2-120 (269)
213 cd05601 STKc_CRIK Catalytic do 95.2 0.16 3.4E-06 42.1 9.0 107 36-151 5-121 (330)
214 cd05625 STKc_LATS1 Catalytic d 95.2 0.26 5.6E-06 41.9 10.5 108 36-152 5-121 (382)
215 cd07855 STKc_ERK5 Catalytic do 95.2 0.2 4.4E-06 41.6 9.6 105 37-152 10-127 (334)
216 cd07850 STKc_JNK Catalytic dom 95.2 0.32 6.9E-06 40.8 10.8 106 36-152 20-138 (353)
217 cd06628 STKc_MAPKKK_Byr2_like 95.2 0.62 1.4E-05 36.8 12.0 110 38-152 6-126 (267)
218 smart00221 STYKc Protein kinas 95.2 0.56 1.2E-05 35.5 11.3 105 37-151 4-117 (225)
219 cd05109 PTKc_HER2 Catalytic do 95.2 0.32 6.9E-06 38.9 10.4 106 36-152 11-129 (279)
220 cd05575 STKc_SGK Catalytic dom 95.2 0.23 4.9E-06 41.1 9.7 105 39-152 2-116 (323)
221 PRK13184 pknD serine/threonine 95.1 0.25 5.5E-06 48.0 11.1 109 36-152 6-133 (932)
222 cd07876 STKc_JNK2 Catalytic do 95.1 0.23 5E-06 41.7 9.9 107 36-152 25-143 (359)
223 cd07842 STKc_CDK8_like Catalyt 95.1 0.69 1.5E-05 37.5 12.4 107 37-152 5-128 (316)
224 PLN00034 mitogen-activated pro 95.1 0.074 1.6E-06 44.7 6.8 106 36-152 78-188 (353)
225 cd05624 STKc_MRCK_beta Catalyt 95.1 0.33 7.1E-06 40.5 10.6 107 36-151 5-121 (331)
226 cd05042 PTKc_Aatyk Catalytic d 95.1 0.4 8.7E-06 38.1 10.8 103 39-152 2-120 (269)
227 cd08227 PK_STRAD_alpha Pseudok 95.1 0.25 5.5E-06 40.9 9.9 106 38-152 4-121 (327)
228 cd06613 STKc_MAP4K3_like Catal 95.1 0.71 1.5E-05 36.2 12.0 106 36-152 7-121 (262)
229 cd05631 STKc_GRK4 Catalytic do 95.1 0.35 7.6E-06 39.1 10.5 109 36-152 4-122 (285)
230 cd06625 STKc_MEKK3_like Cataly 95.1 0.35 7.6E-06 38.0 10.2 109 36-151 6-123 (263)
231 cd05095 PTKc_DDR2 Catalytic do 95.0 0.33 7.2E-06 39.4 10.2 105 37-152 10-150 (296)
232 cd05076 PTK_Tyk2_rpt1 Pseudoki 95.0 0.4 8.8E-06 38.6 10.6 68 80-152 62-137 (274)
233 cd07875 STKc_JNK1 Catalytic do 95.0 0.27 5.9E-06 41.4 10.0 106 36-151 28-145 (364)
234 cd05572 STKc_cGK_PKG Catalytic 95.0 0.46 1E-05 37.5 10.8 105 40-152 1-113 (262)
235 cd05101 PTKc_FGFR2 Catalytic d 95.0 0.44 9.6E-06 38.8 10.9 108 36-152 19-157 (304)
236 cd05579 STKc_MAST_like Catalyt 95.0 0.23 5E-06 38.8 8.9 104 40-152 1-113 (265)
237 cd07843 STKc_CDC2L1 Catalytic 95.0 0.42 9.1E-06 38.6 10.7 105 37-152 10-126 (293)
238 cd06621 PKc_MAPKK_Pek1_like Ca 95.0 0.34 7.5E-06 39.1 10.1 107 36-152 5-125 (287)
239 cd05065 PTKc_EphR_B Catalytic 95.0 0.72 1.6E-05 36.6 11.8 106 36-152 8-126 (269)
240 cd05602 STKc_SGK1 Catalytic do 95.0 0.41 8.8E-06 39.7 10.7 106 39-152 2-116 (325)
241 cd08221 STKc_Nek9 Catalytic do 95.0 0.57 1.2E-05 36.7 11.1 108 36-152 4-121 (256)
242 cd05611 STKc_Rim15_like Cataly 95.0 0.46 9.9E-06 37.5 10.6 107 38-152 2-117 (260)
243 cd07856 STKc_Sty1_Hog1 Catalyt 94.9 0.56 1.2E-05 39.1 11.6 107 36-152 14-128 (328)
244 cd08528 STKc_Nek10 Catalytic d 94.9 0.14 2.9E-06 40.7 7.5 111 37-150 5-131 (269)
245 cd05597 STKc_DMPK_like Catalyt 94.9 0.46 1E-05 39.6 11.0 108 36-152 5-122 (331)
246 cd07849 STKc_ERK1_2_like Catal 94.9 0.46 9.9E-06 39.5 10.9 105 36-152 9-126 (336)
247 cd05050 PTKc_Musk Catalytic do 94.9 0.41 8.9E-06 38.5 10.3 106 36-152 9-150 (288)
248 cd08223 STKc_Nek4 Catalytic do 94.9 0.4 8.7E-06 37.6 10.0 107 37-152 5-122 (257)
249 cd05581 STKc_PDK1 Catalytic do 94.8 0.29 6.4E-06 38.7 9.2 107 37-152 6-122 (280)
250 cd05104 PTKc_Kit Catalytic dom 94.8 0.29 6.2E-06 41.8 9.7 83 37-129 40-131 (375)
251 cd05066 PTKc_EphR_A Catalytic 94.8 0.73 1.6E-05 36.6 11.5 105 37-152 9-126 (267)
252 cd07833 STKc_CDKL Catalytic do 94.8 0.51 1.1E-05 37.6 10.6 106 37-152 6-120 (288)
253 cd06614 STKc_PAK Catalytic dom 94.8 0.4 8.6E-06 38.5 10.1 104 36-152 23-136 (286)
254 cd06619 PKc_MKK5 Catalytic dom 94.8 0.21 4.5E-06 40.2 8.4 106 37-152 6-115 (279)
255 cd06624 STKc_ASK Catalytic dom 94.8 0.5 1.1E-05 37.5 10.5 104 37-152 13-128 (268)
256 cd07835 STKc_CDK1_like Catalyt 94.8 0.65 1.4E-05 37.1 11.2 106 37-152 4-119 (283)
257 cd06608 STKc_myosinIII_like Ca 94.8 0.81 1.7E-05 36.0 11.5 105 36-152 10-133 (275)
258 cd07838 STKc_CDK4_6_like Catal 94.7 1.2 2.5E-05 35.4 12.5 108 37-152 4-127 (287)
259 cd08218 STKc_Nek1 Catalytic do 94.7 0.64 1.4E-05 36.5 10.8 107 36-152 4-121 (256)
260 cd06647 STKc_PAK_I Catalytic d 94.7 0.76 1.6E-05 37.4 11.5 106 36-152 23-135 (293)
261 cd05632 STKc_GRK5 Catalytic do 94.7 0.94 2E-05 36.6 11.9 108 37-152 5-122 (285)
262 cd05088 PTKc_Tie2 Catalytic do 94.6 0.54 1.2E-05 38.5 10.6 106 37-152 12-144 (303)
263 cd07874 STKc_JNK3 Catalytic do 94.6 0.27 5.8E-06 41.2 8.9 107 36-152 21-139 (355)
264 PF07714 Pkinase_Tyr: Protein 94.6 0.24 5.2E-06 39.6 8.3 105 37-152 4-123 (259)
265 cd07830 STKc_MAK_like Catalyti 94.6 0.26 5.7E-06 39.3 8.5 106 37-152 4-119 (283)
266 PRK04750 ubiB putative ubiquin 94.6 0.51 1.1E-05 43.2 11.2 110 34-145 121-272 (537)
267 cd05047 PTKc_Tie Catalytic dom 94.6 0.6 1.3E-05 37.2 10.5 104 39-152 2-132 (270)
268 cd07858 STKc_TEY_MAPK_plant Ca 94.6 0.5 1.1E-05 39.3 10.3 106 36-152 9-128 (337)
269 cd05086 PTKc_Aatyk2 Catalytic 94.5 0.33 7.1E-06 38.8 8.9 104 39-152 2-119 (268)
270 cd05077 PTK_Jak1_rpt1 Pseudoki 94.5 0.85 1.9E-05 36.4 11.2 102 39-152 2-125 (262)
271 cd05051 PTKc_DDR Catalytic dom 94.5 0.44 9.6E-06 38.3 9.6 107 36-152 9-150 (296)
272 cd05630 STKc_GRK6 Catalytic do 94.5 0.7 1.5E-05 37.4 10.8 108 37-152 5-122 (285)
273 cd05043 PTK_Ryk Pseudokinase d 94.4 0.78 1.7E-05 36.6 10.8 105 37-152 11-137 (280)
274 cd05055 PTKc_PDGFR Catalytic d 94.4 0.94 2E-05 37.1 11.4 108 36-152 39-161 (302)
275 cd05075 PTKc_Axl Catalytic dom 94.4 0.27 5.8E-06 39.0 7.9 105 38-152 5-132 (272)
276 cd05063 PTKc_EphR_A2 Catalytic 94.3 0.82 1.8E-05 36.2 10.7 106 36-152 9-127 (268)
277 cd05097 PTKc_DDR_like Catalyti 94.3 0.58 1.3E-05 37.9 10.0 105 37-152 10-149 (295)
278 cd05046 PTK_CCK4 Pseudokinase 94.3 0.94 2E-05 36.0 11.0 106 36-152 9-137 (275)
279 cd05605 STKc_GRK4_like Catalyt 94.3 0.65 1.4E-05 37.5 10.2 108 36-152 4-122 (285)
280 PHA03211 serine/threonine kina 94.2 0.82 1.8E-05 40.8 11.5 98 36-152 173-280 (461)
281 cd07866 STKc_BUR1 Catalytic do 94.2 0.91 2E-05 36.6 10.9 110 33-152 8-135 (311)
282 KOG0605 NDR and related serine 94.2 0.76 1.6E-05 42.0 11.1 123 32-163 140-293 (550)
283 PTZ00024 cyclin-dependent prot 94.2 0.97 2.1E-05 37.4 11.2 110 38-152 15-139 (335)
284 cd06617 PKc_MKK3_6 Catalytic d 94.2 0.78 1.7E-05 36.5 10.4 105 36-151 5-122 (283)
285 cd05040 PTKc_Ack_like Catalyti 94.2 0.52 1.1E-05 37.0 9.2 103 39-152 2-117 (257)
286 cd05098 PTKc_FGFR1 Catalytic d 94.2 1.1 2.3E-05 36.6 11.4 110 33-152 18-160 (307)
287 KOG0197 Tyrosine kinases [Sign 94.2 0.41 8.8E-06 43.2 9.3 103 36-151 210-322 (468)
288 cd06658 STKc_PAK5 Catalytic do 94.2 0.48 1E-05 38.6 9.2 106 36-152 26-138 (292)
289 cd08225 STKc_Nek5 Catalytic do 94.2 1.1 2.4E-05 34.9 11.0 107 37-152 5-121 (257)
290 cd06633 STKc_TAO3 Catalytic do 94.1 1.1 2.3E-05 36.9 11.3 108 36-152 25-141 (313)
291 cd07857 STKc_MPK1 Catalytic do 94.1 1.2 2.7E-05 36.8 11.7 106 37-152 5-125 (332)
292 cd06637 STKc_TNIK Catalytic do 94.1 0.81 1.8E-05 36.2 10.2 104 37-152 11-131 (272)
293 PTZ00284 protein kinase; Provi 94.1 0.92 2E-05 39.9 11.4 104 36-150 133-249 (467)
294 cd07834 STKc_MAPK Catalytic do 94.0 0.64 1.4E-05 38.2 9.8 105 37-152 5-123 (330)
295 cd05078 PTK_Jak2_Jak3_rpt1 Pse 94.0 0.32 7E-06 38.5 7.7 103 39-152 2-120 (258)
296 PHA03209 serine/threonine kina 94.0 0.93 2E-05 38.3 10.9 98 36-152 70-177 (357)
297 cd07870 STKc_PFTAIRE2 Catalyti 94.0 1.1 2.3E-05 36.1 10.8 105 36-152 9-123 (291)
298 cd07846 STKc_CDKL2_3 Catalytic 93.9 0.92 2E-05 36.2 10.3 107 36-152 5-120 (286)
299 cd05061 PTKc_InsR Catalytic do 93.9 0.93 2E-05 36.5 10.4 106 36-152 10-139 (288)
300 cd05110 PTKc_HER4 Catalytic do 93.9 0.47 1E-05 38.7 8.6 107 36-152 11-129 (303)
301 cd05123 STKc_AGC Catalytic dom 93.9 0.47 1E-05 36.9 8.3 104 40-151 1-112 (250)
302 cd07852 STKc_MAPK15 Catalytic 93.8 1.1 2.5E-05 37.1 11.0 105 38-152 13-127 (337)
303 cd06643 STKc_SLK Catalytic dom 93.8 0.97 2.1E-05 36.2 10.3 104 37-152 10-123 (282)
304 cd07865 STKc_CDK9 Catalytic do 93.8 2.3 4.9E-05 34.2 12.4 107 36-152 16-139 (310)
305 PF07914 DUF1679: Protein of u 93.8 0.19 4E-06 44.5 6.4 117 34-154 35-190 (414)
306 cd05578 STKc_Yank1 Catalytic d 93.7 0.59 1.3E-05 36.8 8.7 107 37-151 5-119 (258)
307 cd05080 PTKc_Tyk2_rpt2 Catalyt 93.7 1.6 3.5E-05 34.9 11.4 106 36-152 8-127 (283)
308 PRK10345 hypothetical protein; 93.7 1.8 3.8E-05 34.7 11.4 108 36-151 6-124 (210)
309 cd05105 PTKc_PDGFR_alpha Catal 93.7 0.92 2E-05 39.4 10.6 84 36-129 41-133 (400)
310 cd06618 PKc_MKK7 Catalytic dom 93.7 0.61 1.3E-05 37.8 8.9 109 33-150 15-132 (296)
311 PTZ00266 NIMA-related protein 93.6 1 2.3E-05 44.2 11.7 109 34-151 14-137 (1021)
312 cd05623 STKc_MRCK_alpha Cataly 93.6 1.1 2.5E-05 37.1 10.7 108 36-152 5-122 (332)
313 cd08217 STKc_Nek2 Catalytic do 93.6 0.55 1.2E-05 36.6 8.3 102 37-149 5-122 (265)
314 cd06645 STKc_MAP4K3 Catalytic 93.6 1.5 3.3E-05 34.6 11.0 106 36-152 13-126 (267)
315 cd06607 STKc_TAO Catalytic dom 93.5 0.82 1.8E-05 37.3 9.5 107 36-151 19-134 (307)
316 cd06636 STKc_MAP4K4_6 Catalyti 93.5 1.5 3.2E-05 35.0 10.8 105 36-152 20-141 (282)
317 cd07839 STKc_CDK5 Catalytic do 93.4 1.2 2.5E-05 35.6 10.0 106 37-152 5-119 (284)
318 cd05092 PTKc_TrkA Catalytic do 93.4 0.8 1.7E-05 36.8 9.1 105 36-152 9-142 (280)
319 cd05610 STKc_MASTL Catalytic d 93.3 1.2 2.6E-05 41.5 11.2 109 36-152 8-124 (669)
320 cd05032 PTKc_InsR_like Catalyt 93.3 1.6 3.4E-05 34.6 10.6 106 36-152 10-139 (277)
321 cd05049 PTKc_Trk Catalytic dom 93.2 1.2 2.6E-05 35.4 9.8 104 37-151 10-141 (280)
322 cd06612 STKc_MST1_2 Catalytic 93.2 1.8 4E-05 33.6 10.7 102 37-151 8-118 (256)
323 cd06629 STKc_MAPKKK_Bck1_like 93.2 1.3 2.9E-05 35.0 10.0 112 36-152 5-128 (272)
324 cd06644 STKc_STK10_LOK Catalyt 93.1 2.6 5.6E-05 33.9 11.8 109 32-152 11-130 (292)
325 cd05033 PTKc_EphR Catalytic do 93.1 3 6.5E-05 32.9 12.0 106 36-152 8-126 (266)
326 cd06622 PKc_MAPKK_PBS2_like Ca 93.0 0.81 1.7E-05 36.7 8.6 103 37-150 6-120 (286)
327 cd05062 PTKc_IGF-1R Catalytic 92.9 1.5 3.3E-05 34.9 10.1 106 36-152 10-139 (277)
328 KOG1187 Serine/threonine prote 92.9 1.6 3.4E-05 37.8 10.8 104 38-152 81-194 (361)
329 cd05099 PTKc_FGFR4 Catalytic d 92.9 1.7 3.6E-05 35.6 10.6 107 36-152 16-154 (314)
330 cd05103 PTKc_VEGFR2 Catalytic 92.9 0.9 1.9E-05 38.0 9.0 85 36-130 11-105 (343)
331 cd05093 PTKc_TrkB Catalytic do 92.9 1 2.2E-05 36.4 9.0 105 36-152 9-140 (288)
332 cd05111 PTK_HER3 Pseudokinase 92.9 1.8 3.9E-05 34.8 10.5 109 36-152 11-129 (279)
333 cd07864 STKc_CDK12 Catalytic d 92.8 2.5 5.5E-05 33.9 11.3 106 37-152 12-136 (302)
334 cd08229 STKc_Nek7 Catalytic do 92.8 1.2 2.6E-05 35.1 9.2 108 37-152 7-126 (267)
335 cd07854 STKc_MAPK4_6 Catalytic 92.8 2 4.2E-05 35.9 10.9 104 36-152 9-134 (342)
336 KOG0595 Serine/threonine-prote 92.6 1.6 3.4E-05 38.8 10.2 103 38-150 16-127 (429)
337 KOG1235 Predicted unusual prot 92.6 0.53 1.1E-05 43.2 7.5 126 34-160 163-328 (538)
338 cd05045 PTKc_RET Catalytic dom 92.4 2.1 4.5E-05 34.4 10.3 104 38-152 6-147 (290)
339 cd06616 PKc_MKK4 Catalytic dom 92.4 2 4.2E-05 34.4 10.1 107 36-150 8-125 (288)
340 cd07851 STKc_p38 Catalytic dom 92.4 1.3 2.8E-05 37.0 9.4 107 36-152 19-138 (343)
341 cd07867 STKc_CDC2L6 Catalytic 92.4 3.5 7.7E-05 33.4 11.7 101 38-152 7-128 (317)
342 KOG1164 Casein kinase (serine/ 92.4 2.3 5E-05 35.6 10.8 111 34-151 19-141 (322)
343 cd08222 STKc_Nek11 Catalytic d 92.3 0.59 1.3E-05 36.8 6.8 109 38-152 6-126 (260)
344 PLN00113 leucine-rich repeat r 92.3 0.71 1.5E-05 44.2 8.5 99 37-151 695-799 (968)
345 PHA03390 pk1 serine/threonine- 92.3 1.9 4.1E-05 34.5 9.9 98 39-152 23-129 (267)
346 cd06659 STKc_PAK6 Catalytic do 92.3 2.2 4.7E-05 34.8 10.3 105 36-152 25-137 (297)
347 cd08216 PK_STRAD Pseudokinase 92.2 2.1 4.5E-05 34.8 10.2 97 47-152 17-121 (314)
348 cd05044 PTKc_c-ros Catalytic d 92.2 0.63 1.4E-05 36.8 6.9 104 39-152 2-126 (269)
349 cd07829 STKc_CDK_like Catalyti 92.2 0.96 2.1E-05 35.8 8.0 106 37-152 4-118 (282)
350 cd05094 PTKc_TrkC Catalytic do 92.1 1.3 2.8E-05 35.7 8.8 104 37-152 10-143 (291)
351 cd05064 PTKc_EphR_A10 Catalyti 92.1 4.9 0.00011 31.9 12.0 105 37-152 10-127 (266)
352 cd05035 PTKc_Axl_like Catalyti 92.0 2.6 5.7E-05 33.1 10.3 105 38-152 5-133 (273)
353 cd06634 STKc_TAO2 Catalytic do 92.0 2.6 5.7E-05 34.5 10.5 108 36-152 19-135 (308)
354 cd05106 PTKc_CSF-1R Catalytic 91.9 1.3 2.9E-05 37.7 9.0 84 36-129 42-134 (374)
355 cd05089 PTKc_Tie1 Catalytic do 91.8 2.4 5.2E-05 34.4 10.1 106 37-152 7-139 (297)
356 PTZ00267 NIMA-related protein 91.8 1.1 2.3E-05 39.8 8.5 104 36-151 71-188 (478)
357 cd05100 PTKc_FGFR3 Catalytic d 91.8 2.6 5.6E-05 34.9 10.4 107 36-152 16-154 (334)
358 cd07878 STKc_p38beta_MAPK11 Ca 91.8 2.2 4.8E-05 35.4 10.0 106 36-152 19-138 (343)
359 cd05058 PTKc_Met_Ron Catalytic 91.6 2 4.4E-05 33.7 9.2 104 39-152 2-118 (262)
360 KOG1165 Casein kinase (serine/ 91.6 1.5 3.2E-05 38.6 8.8 102 38-152 34-144 (449)
361 KOG0583 Serine/threonine prote 91.2 5.2 0.00011 34.8 12.0 109 36-151 21-139 (370)
362 cd05053 PTKc_FGFR Catalytic do 91.1 2.5 5.3E-05 33.9 9.3 110 33-152 12-152 (293)
363 cd07879 STKc_p38delta_MAPK13 C 90.9 1.9 4.1E-05 36.0 8.8 105 36-152 19-137 (342)
364 PF01633 Choline_kinase: Choli 90.4 0.62 1.3E-05 36.5 5.1 63 82-153 21-83 (211)
365 cd05124 AFK Actin-Fragmin Kina 90.4 2 4.4E-05 35.4 8.2 30 35-64 2-31 (238)
366 cd05576 STKc_RPK118_like Catal 90.3 3.4 7.4E-05 32.3 9.3 93 43-152 4-105 (237)
367 PTZ00036 glycogen synthase kin 90.2 5 0.00011 35.2 11.1 104 36-152 70-190 (440)
368 KOG0192 Tyrosine kinase specif 90.0 5.1 0.00011 34.9 10.8 103 40-152 49-162 (362)
369 PHA03207 serine/threonine kina 89.8 5.6 0.00012 34.0 11.0 100 36-152 96-205 (392)
370 KOG0032 Ca2+/calmodulin-depend 89.6 4.4 9.6E-05 35.5 10.2 105 38-151 41-154 (382)
371 PF06176 WaaY: Lipopolysacchar 89.6 1.8 3.8E-05 35.6 7.2 110 36-152 35-155 (229)
372 cd05074 PTKc_Tyro3 Catalytic d 89.5 5.3 0.00011 31.5 9.9 105 38-152 5-133 (273)
373 cd08226 PK_STRAD_beta Pseudoki 89.4 5.1 0.00011 33.0 10.1 104 39-152 5-121 (328)
374 cd07877 STKc_p38alpha_MAPK14 C 89.3 8.4 0.00018 32.1 11.4 107 36-152 21-140 (345)
375 cd05091 PTKc_Ror2 Catalytic do 89.3 4.6 0.0001 32.2 9.5 105 37-152 10-144 (283)
376 cd06635 STKc_TAO1 Catalytic do 89.1 11 0.00024 30.8 12.7 107 36-152 29-145 (317)
377 cd05107 PTKc_PDGFR_beta Cataly 88.4 7 0.00015 34.0 10.6 84 37-130 42-134 (401)
378 PTZ00283 serine/threonine prot 88.0 3.3 7.1E-05 37.1 8.5 110 34-152 33-163 (496)
379 COG1718 RIO1 Serine/threonine 87.9 3.3 7.1E-05 34.8 7.8 33 84-119 118-150 (268)
380 cd05054 PTKc_VEGFR Catalytic d 87.9 5 0.00011 33.6 9.1 83 37-129 12-104 (337)
381 smart00220 S_TKc Serine/Threon 86.4 6.5 0.00014 29.7 8.4 94 47-151 4-106 (244)
382 KOG1163 Casein kinase (serine/ 86.3 10 0.00022 32.2 9.8 105 36-151 19-130 (341)
383 KOG0667 Dual-specificity tyros 86.2 8.4 0.00018 35.8 10.1 105 36-151 190-308 (586)
384 COG0661 AarF Predicted unusual 85.3 5.6 0.00012 36.4 8.5 112 33-145 126-277 (517)
385 cd07868 STKc_CDK8 Catalytic do 84.9 19 0.00042 29.2 11.6 100 38-151 7-127 (317)
386 KOG4720 Ethanolamine kinase [L 84.4 4.1 8.8E-05 35.4 6.8 102 31-151 80-186 (391)
387 PLN03225 Serine/threonine-prot 83.7 6.8 0.00015 35.9 8.5 103 33-151 132-274 (566)
388 KOG0198 MEKK and related serin 83.0 13 0.00029 31.8 9.4 105 36-151 21-136 (313)
389 PLN03224 probable serine/threo 82.6 18 0.00038 33.0 10.6 118 33-152 145-329 (507)
390 KOG0587 Traf2- and Nck-interac 82.4 17 0.00037 35.5 10.6 109 31-150 17-141 (953)
391 KOG2686 Choline kinase [Cell w 82.2 5.3 0.00012 35.0 6.7 110 31-151 39-150 (366)
392 KOG0615 Serine/threonine prote 82.0 22 0.00047 32.1 10.5 111 35-151 175-295 (475)
393 KOG0594 Protein kinase PCTAIRE 80.1 12 0.00025 32.4 8.0 107 36-152 15-140 (323)
394 TIGR02905 spore_yutH spore coa 79.4 23 0.0005 29.8 9.7 89 48-160 21-117 (313)
395 KOG0661 MAPK related serine/th 79.4 1.9 4.2E-05 39.2 3.2 107 36-152 14-130 (538)
396 KOG0194 Protein tyrosine kinas 78.7 15 0.00033 33.3 8.7 104 38-150 163-280 (474)
397 PF10309 DUF2414: Protein of u 76.6 5.9 0.00013 26.0 4.1 38 6-50 13-50 (62)
398 PHA02882 putative serine/threo 73.4 32 0.00069 27.8 8.7 113 33-152 12-146 (294)
399 KOG0598 Ribosomal protein S6 k 73.1 39 0.00084 29.7 9.4 109 36-152 29-145 (357)
400 COG3178 Predicted phosphotrans 71.9 2.5 5.4E-05 36.5 1.8 53 96-152 81-133 (351)
401 KOG0592 3-phosphoinositide-dep 69.4 25 0.00055 32.7 7.7 107 37-152 78-194 (604)
402 KOG1989 ARK protein kinase fam 69.0 21 0.00047 34.1 7.4 102 38-152 43-164 (738)
403 KOG0663 Protein kinase PITSLRE 68.6 41 0.00089 29.8 8.5 105 36-150 80-195 (419)
404 PHA03210 serine/threonine kina 66.6 35 0.00076 30.5 8.1 111 36-152 152-287 (501)
405 KOG1290 Serine/threonine prote 66.2 48 0.001 30.7 8.7 131 11-155 55-210 (590)
406 KOG2268 Serine/threonine prote 66.1 9.6 0.00021 33.8 4.2 105 40-151 100-221 (465)
407 KOG0581 Mitogen-activated prot 65.6 47 0.001 29.2 8.3 104 36-150 83-196 (364)
408 KOG1094 Discoidin domain recep 62.2 37 0.0008 32.2 7.4 102 35-148 541-653 (807)
409 PF14633 SH2_2: SH2 domain; PD 62.1 12 0.00026 30.5 3.9 42 4-54 39-82 (220)
410 PF03109 ABC1: ABC1 family; I 60.5 3.7 8E-05 29.8 0.6 59 33-101 12-71 (119)
411 KOG0658 Glycogen synthase kina 59.7 41 0.00089 29.6 6.9 103 36-151 28-144 (364)
412 KOG0611 Predicted serine/threo 55.5 38 0.00082 30.9 6.1 94 38-141 59-158 (668)
413 PF11588 DUF3243: Protein of u 52.3 5.6 0.00012 27.5 0.4 33 114-147 1-44 (81)
414 KOG0662 Cyclin-dependent kinas 50.2 69 0.0015 26.2 6.3 99 36-143 6-108 (292)
415 KOG0608 Warts/lats-like serine 49.1 19 0.00041 34.6 3.3 50 82-136 677-728 (1034)
416 PF06437 ISN1: IMP-specific 5' 49.0 15 0.00033 32.5 2.7 62 12-86 204-265 (408)
417 KOG2270 Serine/threonine prote 45.5 32 0.00068 31.1 4.0 70 42-119 155-248 (520)
418 COG1923 Hfq Uncharacterized ho 41.0 33 0.00071 23.5 2.7 27 42-68 37-64 (77)
419 PF11454 DUF3016: Protein of u 37.8 80 0.0017 24.0 4.8 47 44-91 87-137 (141)
420 KOG1166 Mitotic checkpoint ser 36.4 1.5E+02 0.0033 29.5 7.5 104 38-151 704-813 (974)
421 PRK10963 hypothetical protein; 35.8 22 0.00048 28.7 1.5 18 8-25 2-19 (223)
422 PF09192 Act-Frag_cataly: Acti 35.6 1.2E+02 0.0027 25.6 6.0 30 36-65 29-63 (275)
423 COG3231 Aph Aminoglycoside pho 35.0 2.4E+02 0.0051 23.8 7.4 99 37-151 23-127 (266)
424 PF04340 DUF484: Protein of un 34.8 5.7 0.00012 31.9 -2.1 21 5-25 2-22 (225)
425 PF10009 DUF2252: Uncharacteri 32.5 1.9E+02 0.0042 25.3 7.0 115 34-154 216-346 (385)
426 KOG4721 Serine/threonine prote 32.5 1E+02 0.0022 29.5 5.3 96 32-151 123-231 (904)
427 KOG1167 Serine/threonine prote 31.5 71 0.0015 28.6 4.0 107 32-151 36-151 (418)
428 cd03527 RuBisCO_small Ribulose 31.5 48 0.0011 23.7 2.5 46 73-118 48-96 (99)
429 KOG0580 Serine/threonine prote 31.4 85 0.0019 26.5 4.3 104 38-150 28-142 (281)
430 KOG0577 Serine/threonine prote 30.6 66 0.0014 30.8 3.8 110 36-152 30-146 (948)
431 cd00307 RuBisCO_small_like Rib 27.9 1.1E+02 0.0023 21.2 3.7 46 73-118 31-81 (84)
432 PF09162 Tap-RNA_bind: Tap, RN 27.7 61 0.0013 22.7 2.4 32 87-118 23-55 (88)
433 COG1949 Orn Oligoribonuclease 27.5 43 0.00093 26.5 1.8 55 37-97 29-99 (184)
434 COG4957 Predicted transcriptio 26.2 63 0.0014 24.7 2.4 22 108-130 74-95 (148)
435 KOG0607 MAP kinase-interacting 25.5 1.5E+02 0.0033 26.3 4.9 73 76-151 117-195 (463)
436 KOG0671 LAMMER dual specificit 24.9 4.6E+02 0.01 23.5 7.8 70 78-150 129-210 (415)
437 PRK01379 cyaY frataxin-like pr 23.8 97 0.0021 22.3 2.9 26 34-64 29-55 (103)
438 KOG0589 Serine/threonine prote 23.6 3.4E+02 0.0074 24.4 7.0 98 37-149 9-123 (426)
439 PF00101 RuBisCO_small: Ribulo 23.3 46 0.00099 23.8 1.2 44 74-117 48-94 (99)
440 PF03485 Arg_tRNA_synt_N: Argi 23.2 80 0.0017 21.1 2.4 32 10-48 52-84 (85)
441 KOG0664 Nemo-like MAPK-related 22.6 55 0.0012 28.4 1.7 52 37-93 58-111 (449)
442 TIGR02383 Hfq RNA chaperone Hf 22.5 1.1E+02 0.0025 19.9 2.8 25 43-67 34-59 (61)
443 KOG0616 cAMP-dependent protein 22.2 4.2E+02 0.009 23.2 6.9 105 36-152 48-164 (355)
444 KOG0660 Mitogen-activated prot 22.0 1.2E+02 0.0027 26.6 3.7 105 36-151 26-144 (359)
445 KOG0604 MAP kinase-activated p 21.5 1.8E+02 0.0039 25.6 4.5 48 104-152 128-181 (400)
446 KOG0200 Fibroblast/platelet-de 21.5 4.7E+02 0.01 24.2 7.7 81 39-132 303-397 (609)
447 KOG0600 Cdc2-related protein k 21.0 6.7E+02 0.015 23.4 8.3 104 36-151 121-237 (560)
448 cd01716 Hfq Hfq, an abundant, 20.5 1.3E+02 0.0028 19.6 2.8 27 42-68 29-56 (61)
449 KOG1345 Serine/threonine kinas 20.5 93 0.002 27.0 2.6 102 37-151 29-140 (378)
450 TIGR02457 TreS_Cterm trehalose 20.4 6E+02 0.013 23.5 8.0 103 35-151 168-300 (528)
451 PF07409 GP46: Phage protein G 20.2 3.5E+02 0.0076 19.7 5.4 29 34-62 83-112 (116)
No 1
>PRK12396 5-methylribose kinase; Reviewed
Probab=100.00 E-value=1.7e-48 Score=337.95 Aligned_cols=156 Identities=32% Similarity=0.511 Sum_probs=146.9
Q ss_pred CCCCccccCHhhHHHHHHhC-CCcccccCCCCCcceeEecCCCceeEEEEEEeC--CCeEEEeecCccccccCCCCCCCh
Q 048614 2 AFTEFRPLDDKSLLEYIKAT-PSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGS--SGSFVIKQALPYVRCIGESWPMTK 78 (165)
Q Consensus 2 ~~~~~~~l~~~~v~~Yl~~~-~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~--~gsvIvKqa~p~~r~~~~~~~l~~ 78 (165)
.|..|++||++++++|++++ +.++ ..++++++++||||+|+||||.+. ++|||||||+||+|+ +++||+|+
T Consensus 3 ~~~~y~~l~~~~v~~yl~~~l~~~~-----~~~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv-~~swpL~~ 76 (409)
T PRK12396 3 KFTKYFLMEANDVIVYVKEKLSKFE-----HAKGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARI-SDEFKLST 76 (409)
T ss_pred ccccceeCCHhHHHHHHHHhcCCCC-----CcccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhcc-CCCCCCCh
Confidence 35699999999999999985 7554 567899999999999999999986 349999999999995 79999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccC
Q 048614 79 ERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT 158 (165)
Q Consensus 79 ~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~ 158 (165)
+|+++|+++|+.+++++|++||+||+||++++++|||||+ ++.+||++|++|+.+|.+|++||+|||++||+||||+|+
T Consensus 77 ~R~~~E~~aL~~~~~~~P~~VP~vy~~D~e~~~~vMEdL~-~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd~~l~ 155 (409)
T PRK12396 77 NRIRIESDVLQLEEELAPGLVPKVYLFDSVMNCCVMEDLS-DHTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMN 155 (409)
T ss_pred HHHHHHHHHHHHHHhhCCCcCCeEEEECcHHhhHHHHhCc-ccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcchhccC
Confidence 9999999999999999999999999999999999999999 699999999999999999999999999999999999999
Q ss_pred chhhhc
Q 048614 159 TTEHKR 164 (165)
Q Consensus 159 ~~~~k~ 164 (165)
+++||+
T Consensus 156 ~~~kk~ 161 (409)
T PRK12396 156 HKEKKE 161 (409)
T ss_pred hHHHHH
Confidence 999996
No 2
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=100.00 E-value=1.1e-41 Score=292.65 Aligned_cols=126 Identities=50% Similarity=0.826 Sum_probs=121.3
Q ss_pred EecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 048614 38 KEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMR 115 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vME 115 (165)
+|+||||+|+||||.+++| |||||||+||+|+++++||++++|+++|+++|+.+++++|+.||++|+||++++++|||
T Consensus 1 ~EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~vME 80 (370)
T TIGR01767 1 QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVTVME 80 (370)
T ss_pred CcCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccccceehHh
Confidence 4789999999999998864 89999999999988889999999999999999999999999999999999999999999
Q ss_pred cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCchhhhc
Q 048614 116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~~~k~ 164 (165)
||+ ++.+||++|++|+.+|.+|++||+|||+|||+|||++|++++||+
T Consensus 81 dL~-~~~ilR~~Li~g~~~p~~A~~iG~~La~tlf~tsd~~~~~~~kk~ 128 (370)
T TIGR01767 81 DLS-HHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSDYALEPKVKKA 128 (370)
T ss_pred hCc-cchHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCHHHHHH
Confidence 999 699999999999999999999999999999999999999988885
No 3
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=100.00 E-value=6e-40 Score=285.42 Aligned_cols=156 Identities=47% Similarity=0.781 Sum_probs=146.3
Q ss_pred CCCccccCHhhHHHHHHh-CCCcccccCCCCCcceeEecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChH
Q 048614 3 FTEFRPLDDKSLLEYIKA-TPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKE 79 (165)
Q Consensus 3 ~~~~~~l~~~~v~~Yl~~-~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~ 79 (165)
+++|++||+++|++||+. .+.+. +.++++++++||||+|+||||++.+| ++|||||+||+|+++++|+++.+
T Consensus 1 ~~~y~~l~~~~v~~yl~~~~~~~~-----~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~e 75 (401)
T PRK09550 1 MSGYETLTEEDAVEYAALKLGLFD-----PKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLD 75 (401)
T ss_pred CCCCeeCCHhHHHHHHHHhcCCCC-----CcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHH
Confidence 578999999999999954 46553 56788999999999999999999876 89999999999998888999999
Q ss_pred HHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCc
Q 048614 80 RAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTT 159 (165)
Q Consensus 80 R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~ 159 (165)
|+++|+++|+.+++.+|..||++|+||++++++|||||+ ++.+||++|++|+.+|.+|++||++||++||+|||++|++
T Consensus 76 R~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVME~L~-~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f~tsd~~~~~ 154 (401)
T PRK09550 76 RARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVMEDLS-DHKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSDFGLSS 154 (401)
T ss_pred HHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEEEEecCC-CccHHHHHHhcCCccHHHHHHHHHHHHHHHhccchhhcCh
Confidence 999999999999999999999999999999999999999 6999999999999999999999999999999999999999
Q ss_pred hhhhc
Q 048614 160 TEHKR 164 (165)
Q Consensus 160 ~~~k~ 164 (165)
++||+
T Consensus 155 ~~~~~ 159 (401)
T PRK09550 155 EEKKA 159 (401)
T ss_pred hhhhh
Confidence 98774
No 4
>PLN02756 S-methyl-5-thioribose kinase
Probab=100.00 E-value=7.5e-40 Score=285.11 Aligned_cols=164 Identities=88% Similarity=1.427 Sum_probs=154.0
Q ss_pred CCCCCccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHH
Q 048614 1 MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKER 80 (165)
Q Consensus 1 ~~~~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R 80 (165)
|.|..|++|+.+++.+|+++++.+.+.++...+.++++++||||+|+||||+++++++||||++|++|+++++||++.+|
T Consensus 1 ~~~~~y~~l~~~~l~~yl~~~~~~~~~l~g~~~~l~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R 80 (418)
T PLN02756 1 MAFSEFRPLDEKSLVEYIKATPALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKER 80 (418)
T ss_pred CCccccccCCHHHHHHHHHHccchhhhcCCCCCCceEEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccH
Confidence 67899999999999999999877765555555678999999999999999998766999999999999888999999999
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCch
Q 048614 81 AYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTT 160 (165)
Q Consensus 81 ~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~ 160 (165)
.++|+++|+..++++|..||++|+||+++++++||||++++.+||+.|++|..+|.++++||++||+++|+||||+|+++
T Consensus 81 ~~~Ea~aL~~~~~~~p~~VPkVy~~ded~~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf~tSd~~~~~~ 160 (418)
T PLN02756 81 AYFEATALREHGRLCPDHVPEVYHFDRTMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSLLYHDTT 160 (418)
T ss_pred HHHHHHHHHHhhhcCCCCCCeEEEECCCCCEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHhhcchhccChh
Confidence 99999999999999999999999999999999999998458999999999999999999999999999999999999999
Q ss_pred hhhc
Q 048614 161 EHKR 164 (165)
Q Consensus 161 ~~k~ 164 (165)
+||+
T Consensus 161 ~kk~ 164 (418)
T PLN02756 161 EHKR 164 (418)
T ss_pred hhhH
Confidence 9986
No 5
>COG4857 Predicted kinase [General function prediction only]
Probab=100.00 E-value=2.1e-40 Score=275.88 Aligned_cols=138 Identities=47% Similarity=0.814 Sum_probs=132.1
Q ss_pred ccCCCCCcceeEecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614 27 KIGNKFDALTIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH 104 (165)
Q Consensus 27 ~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~ 104 (165)
.+|+....|+|+++||||+||||.|.+..| +.|||||+||+|++|.+||+|..|.++|+.+|+..++.+|..||++|+
T Consensus 25 k~G~~~s~ltvkEIGDGNlNyvF~V~~~~~~ka~ivKQA~py~r~vGeswPL~l~Rs~iE~~aL~rq~~~aPh~VPeIyf 104 (408)
T COG4857 25 KIGPNKSHLTVKEIGDGNLNYVFIVEGKIGGKAAIVKQALPYVRLVGESWPLPLKRSFIEYHALRRQNARAPHFVPEIYF 104 (408)
T ss_pred HhCCCccceEEEEecCCceeEEEEEecCCCCeehhhhhhhhHHHhcCCcCCCcchHHHHHHHHHHHhhccCCCCcceeEe
Confidence 456667899999999999999999999855 999999999999999999999999999999999999999999999999
Q ss_pred EcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCchhhhcC
Q 048614 105 FDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165 (165)
Q Consensus 105 ~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~~~k~~ 165 (165)
||+.+.++|||||+ .++++|.+|++|+.+|+++.+||.|||+++|++||+.|.+++||++
T Consensus 105 ~De~mavivMEdls-~~kilR~~LI~Gr~~P~~~~~igeFlarTLf~~sDl~m~~k~kK~~ 164 (408)
T COG4857 105 FDEIMAVIVMEDLS-PHKILRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNTKDKKAD 164 (408)
T ss_pred ecchhhhhhHhhhh-HHHHHHHHHhccccCccHHHHHHHHHHHHHHhccccccchHhHHHH
Confidence 99999999999999 4999999999999999999999999999999999999999999974
No 6
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=2e-11 Score=97.11 Aligned_cols=101 Identities=25% Similarity=0.261 Sum_probs=87.8
Q ss_pred eEEEEEEeCCCeEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHH
Q 048614 46 NFVYIVVGSSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIIL 124 (165)
Q Consensus 46 N~v~rv~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~l 124 (165)
+-|+++..-+..+|+|...|+. |...-|-.+..+|++.|+++|..+..+ .-.||.+|++|+.+..++|||++ +..+
T Consensus 10 a~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~-GV~~P~v~dvD~~~~~I~me~I~--G~~l 86 (204)
T COG3642 10 AIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA-GVPVPIVYDVDPDNGLIVMEYIE--GELL 86 (204)
T ss_pred eeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCEEEEEEeC--ChhH
Confidence 4455664433389999999997 765457789999999999999999887 88999999999999999999998 6899
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 048614 125 RKGLIAGIKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 125 r~~l~~g~~~~~~a~~iG~~La~~h~~ 151 (165)
|+.+..+ .+.++..+|..+|++|..
T Consensus 87 kd~l~~~--~~~~~r~vG~~vg~lH~~ 111 (204)
T COG3642 87 KDALEEA--RPDLLREVGRLVGKLHKA 111 (204)
T ss_pred HHHHHhc--chHHHHHHHHHHHHHHhc
Confidence 9999987 589999999999999975
No 7
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.15 E-value=3.9e-10 Score=85.02 Aligned_cols=102 Identities=18% Similarity=0.146 Sum_probs=79.4
Q ss_pred eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 048614 36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMR 115 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vME 115 (165)
.++++++|..|.||+++..+++++||+..+... ... ....|+++|+.+... ..+|+++.+|.+...+|||
T Consensus 2 ~~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-------~~~-~~~~E~~~l~~l~~~--~~~P~~~~~~~~~~~lv~e 71 (170)
T cd05151 2 HISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-------LLI-NRENEAENSKLAAEA--GIGPKLYYFDPETGVLITE 71 (170)
T ss_pred ceeecCCcccCceEEEEECCeEEEEEeCCCCcc-------ccc-CHHHHHHHHHHHHHh--CCCCceEEEeCCCCeEEEE
Confidence 578999999999999998866999999864321 112 237899999998774 4589999999989999999
Q ss_pred cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
++++ ..+... ....+....++|+.|+++|..+
T Consensus 72 ~i~G--~~l~~~---~~~~~~~~~~l~~~l~~LH~~~ 103 (170)
T cd05151 72 FIEG--SELLTE---DFSDPENLEKIAKLLKKLHSSP 103 (170)
T ss_pred ecCC--Cccccc---cccCHHHHHHHHHHHHHHhCCC
Confidence 9983 333322 1234678899999999999876
No 8
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.10 E-value=7e-10 Score=86.46 Aligned_cols=111 Identities=17% Similarity=0.225 Sum_probs=84.1
Q ss_pred ceeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----
Q 048614 35 LTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT----- 108 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~----- 108 (165)
+.++++++|..|.+|||...+| ++|||...+--. .-...+...|+++++.+... ...+|+++.++++
T Consensus 1 ~~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~------~~~~~~~~~E~~~~~~l~~~-~~~vp~~~~~~~~~~~~~ 73 (223)
T cd05154 1 LEVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGAL------LPSAHDVAREYRVLRALAGT-GVPVPKVLALCEDPSVLG 73 (223)
T ss_pred CcceecCCCccceEEEEEecCCcceEEEeCCCccc------CcccccHHHHHHHHHHhhCC-CCCCCCEEEECCCCCccC
Confidence 3578999999999999998875 999999753211 12345789999999999884 4469999999987
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcccc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~tsd 154 (165)
...++||+++ +..+...+..+... ..++.++|+.|+++|..+..
T Consensus 74 ~~~~v~e~i~--G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~ 121 (223)
T cd05154 74 TPFYVMERVD--GRVLRDRLLRPELSPEERRALARALADTLAALHSVDPA 121 (223)
T ss_pred CceEEEEEeC--CEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChh
Confidence 4589999998 34555544322222 36799999999999988753
No 9
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.95 E-value=5.1e-09 Score=83.76 Aligned_cols=114 Identities=18% Similarity=0.141 Sum_probs=93.7
Q ss_pred eeEecCCCceeEEEEEEeCCCeEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM 114 (165)
++..+..|-=-.|++....+..-|||...|+- |...-|-.++..|+..|++.|.....+ .-.+|.+|+.|..++.+.|
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-GIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceEEEEecCCCeEEE
Confidence 45555556556888888775578899998886 764447789999999999999999887 8899999999999999999
Q ss_pred ecCCCCchHHHHHHHcCC----CC---HHHHHHHHHHHHHHHhc
Q 048614 115 RYLEPPHIILRKGLIAGI----KY---PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~----~~---~~~a~~iG~~La~~h~~ 151 (165)
|+++ ++..+|+.+..-- .+ ..++..||+.+|++|.-
T Consensus 90 E~~~-g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n 132 (229)
T KOG3087|consen 90 EFID-GASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN 132 (229)
T ss_pred Eecc-chhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC
Confidence 9998 6888888887632 22 36899999999999963
No 10
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.91 E-value=9.8e-09 Score=79.71 Aligned_cols=108 Identities=22% Similarity=0.203 Sum_probs=85.3
Q ss_pred cCCCceeEEEEEEeCCCeEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCC
Q 048614 40 VGDGNLNFVYIVVGSSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLE 118 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~ 118 (165)
+|.|+...||++...+..+++|+..+.. +....++.+..+|...|.++|+.+... ...+|.++.++++...++||+++
T Consensus 2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKA-GVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEEEECCCCEEEEEEEC
Confidence 6889999999999654499999987654 221124667778999999999888753 34789999999999999999997
Q ss_pred CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 119 ~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
+..|.+.+..+.. .++.+++..|+.+|...
T Consensus 81 --g~~l~~~~~~~~~--~~~~~i~~~l~~lH~~g 110 (199)
T TIGR03724 81 --GKPLKDVIEEGND--ELLREIGRLVGKLHKAG 110 (199)
T ss_pred --CccHHHHHhhcHH--HHHHHHHHHHHHHHHCC
Confidence 4577776655432 78999999999999865
No 11
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.80 E-value=1.4e-08 Score=79.01 Aligned_cols=104 Identities=25% Similarity=0.296 Sum_probs=77.3
Q ss_pred eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC---C--Cc
Q 048614 36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR---T--MS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~---~--~~ 110 (165)
.|+++++|..|.+|+|++.+|++|||...+. . ...+...|+++++.+.+.-. .||+++.++. . ..
T Consensus 1 ~i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~-~--------~~~~~~~e~~~~~~l~~~~~-pvP~~~~~~~~~~~~~~~ 70 (239)
T PF01636_consen 1 HIRPLSGGFSNRVYRVTTDDGRYVLKFYRPP-D--------AAERLRREAAVLRQLAEHGI-PVPRVLAFDTSDEFNGFP 70 (239)
T ss_dssp -EEEEEESSSSEEEEEEETTSEEEEEEESSH-H--------HHHHHHHHHHHHHHHHHTTS-BS--EEEEEEETEETSEE
T ss_pred CCccCCCCCeeeEEEEEECCcEEEEEEeCCC-C--------CHHHHHHHHHHHHHHHhcCC-CCceEEeecccccccccc
Confidence 4789999999999999999889999997755 2 22688899999999987633 7999998442 2 23
Q ss_pred eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 111 LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
..+|++++ ...+.. .+.....+.++.++|++|+++|..+
T Consensus 71 ~~~~~~i~--g~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~ 109 (239)
T PF01636_consen 71 YLLMEYIP--GRPLDD-ELSPEQRPELLRQLGRALAQLHQVP 109 (239)
T ss_dssp EEEEEEES--SEEHHH-TSTHHHHHHHHHHHHHHHHHHHHSH
T ss_pred eEEEEEec--cccccc-cccccccccccccchhhhhhccccc
Confidence 68999998 344444 1122234678999999999999985
No 12
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.74 E-value=1.1e-07 Score=76.60 Aligned_cols=101 Identities=16% Similarity=0.077 Sum_probs=76.2
Q ss_pred eEecCCCce-eEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEE
Q 048614 37 IKEVGDGNL-NFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT--MSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~-N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~--~~~~v 113 (165)
.++|..|.. |.||+++..+++++||...+.. ..+...|+++|+.+++. ..+|+++++++. ...+|
T Consensus 3 ~~~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~----------~~~~~~E~~~l~~l~~~--~~vP~v~~~~~~~~~~~lv 70 (244)
T cd05150 3 WERVTEGQSGATVYRLDGKNPGLYLKIAPSGP----------TYELEREAERLRWLAGK--LPVPEVIDYGSDDGRAWLL 70 (244)
T ss_pred ceecCCCCCcCeEEEEcCCCCcEEEEecCCCc----------ccchHHHHHHHHHHHhc--CCCCeEEEEEecCCccEEE
Confidence 356666655 9999999876699999987442 23556799999999876 569999999876 47899
Q ss_pred EecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
||+++ +..+..... ....+.++.++|++|+++|...
T Consensus 71 ~e~i~--G~~l~~~~~-~~~~~~~~~~l~~~l~~lH~i~ 106 (244)
T cd05150 71 TSAVP--GVPAAALWE-ELEPERLVDALAEALRRLHALP 106 (244)
T ss_pred EEeeC--CccHhHhhc-ccCHHHHHHHHHHHHHHHhcCC
Confidence 99998 345544322 1223578999999999999865
No 13
>PRK05231 homoserine kinase; Provisional
Probab=98.71 E-value=3e-07 Score=76.82 Aligned_cols=129 Identities=14% Similarity=0.124 Sum_probs=92.7
Q ss_pred CCccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHH
Q 048614 4 TEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYF 83 (165)
Q Consensus 4 ~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~ 83 (165)
+-|..|+.+++.+.|+.-+. .+-.+++++++|..|.+|+|++.+|++|||... + .+.+....
T Consensus 2 ~vyt~ls~~~l~~~l~~y~~--------~~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~---~-------~~~~~l~~ 63 (319)
T PRK05231 2 AVYTDVSDDELAAFLAPYDL--------GELLSLKGIAEGIENSNFFLTTTQGEYVLTLFE---R-------LTAEDLPF 63 (319)
T ss_pred CccccCCHHHHHHHHHhcCC--------chhhccchhccccccceEEEEeCCCcEEEEEec---c-------CChHHhHH
Confidence 45889999999999965321 133578999999999999999888899999643 1 23355667
Q ss_pred HHHHHHHhhccCCCCCceEEEE--------cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614 84 EALALKEHGQLCPDHVPEVYHF--------DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL 155 (165)
Q Consensus 84 E~~~L~~~~~~~p~~vP~v~~~--------D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~ 155 (165)
|.++|+.+.+. .-.||+++.. ......++||++++ . .+ ....+..+.++|+.||++|..+.+|
T Consensus 64 ~~~~l~~L~~~-glpvP~~i~~~~G~~~~~~~g~~~~l~~~l~G-~-~~------~~~~~~~~~~~G~~LA~lH~~~~~f 134 (319)
T PRK05231 64 FLGLMQHLAAR-GVPVPAPVARRDGAALGELAGKPAAIVTFLEG-K-WP------RAPTAAHCAEVGEMLARMHLAGRDF 134 (319)
T ss_pred HHHHHHHHHHC-CCCCCcceeCCCCCEeeeeCCEEEEEEEecCC-C-CC------CCCCHHHHHHHHHHHHHHHhhhhcC
Confidence 88888887653 2236776642 23446889999983 2 21 1134567899999999999999887
Q ss_pred ccCc
Q 048614 156 YRTT 159 (165)
Q Consensus 156 ~l~~ 159 (165)
....
T Consensus 135 ~~~~ 138 (319)
T PRK05231 135 PLER 138 (319)
T ss_pred CccC
Confidence 6543
No 14
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.71 E-value=1.1e-07 Score=74.34 Aligned_cols=112 Identities=21% Similarity=0.127 Sum_probs=83.5
Q ss_pred EecCCCceeEEEEEEeCCCeEEEeecCcccccc-CCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 048614 38 KEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCI-GESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRY 116 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~-~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEd 116 (165)
+.+|.|....||++...++.++||+..+..... ..+.....+|...|++.|+.+... ...+|.++++|.+...++|||
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKA-GVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCeEEEEeCCCCEEEEEE
Confidence 568899999999998755599999977654211 112334456788899998877642 356899999999999999999
Q ss_pred CCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHhcc
Q 048614 117 LEPPHIILRKGLIAGI-KYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 L~~~~~~lr~~l~~g~-~~~~~a~~iG~~La~~h~~t 152 (165)
++ +..|.+.+.... ....++.+++.+|+.+|...
T Consensus 81 ~~--G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 115 (211)
T PRK14879 81 IE--GEPLKDLINSNGMEELELSREIGRLVGKLHSAG 115 (211)
T ss_pred eC--CcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCC
Confidence 97 457777665432 22478999999999999764
No 15
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.70 E-value=2.3e-07 Score=73.96 Aligned_cols=105 Identities=13% Similarity=0.062 Sum_probs=76.5
Q ss_pred ceeEecCCCceeEEEEEEeCC--C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCce
Q 048614 35 LTIKEVGDGNLNFVYIVVGSS--G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSL 111 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rv~~~~--g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~ 111 (165)
+++++++||..|.+|||+..+ + ++|+|...+.. ....+| ..|.++++.++.. +.+|+++++.. ..
T Consensus 1 ~~i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~-------~~~~d~-~~E~~~~~~l~~~--gl~P~v~~~~~--~~ 68 (235)
T cd05157 1 ITFKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKT-------ELIIDR-ERELRIHKLLSKH--GLAPKLYATFQ--NG 68 (235)
T ss_pred CeEEEcCCcccceEEEEEcCCCCCCeEEEEEccCCc-------cceecH-HHHHHHHHHHHhC--CCCCeEEEEeC--Cc
Confidence 468999999999999999874 4 89999655321 122333 3599999998764 35899987764 45
Q ss_pred EEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY 156 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~ 156 (165)
++||+++ + ..+...-+ ..+....++|..||++|..+..+.
T Consensus 69 ~l~e~i~-G-~~l~~~~~---~~~~~~~~la~~l~~lH~~~~~~~ 108 (235)
T cd05157 69 LIYEFIP-G-RTLEPEDL---RNPKIYRLIARELAKLHSIKPPEA 108 (235)
T ss_pred EEEEeeC-C-CcCCHHHc---cChHHHHHHHHHHHHHhccccccc
Confidence 8999998 3 34432211 246788999999999999987764
No 16
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=98.68 E-value=1.8e-07 Score=78.78 Aligned_cols=97 Identities=23% Similarity=0.237 Sum_probs=69.2
Q ss_pred CcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCc
Q 048614 33 DALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RTMS 110 (165)
Q Consensus 33 ~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~~~ 110 (165)
.-.++++++||-+|-.||+++.++++.||....-.+ .....|++-|+.+++..|..||+++.+- .+..
T Consensus 18 ~i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~----------~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~ 87 (288)
T PF03881_consen 18 KITSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGR----------DMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDA 87 (288)
T ss_dssp ---EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGC----------CHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCC
T ss_pred ceeeeEecCCCChhheEEEECCCccEEEEecChhhH----------HHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCc
Confidence 345999999999999999997766999998872211 4788999999999999999999999975 3566
Q ss_pred eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Q 048614 111 LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLF 150 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~ 150 (165)
.++||++.. . ...+...+.+|+.||++|.
T Consensus 88 fLlle~l~~-~----------~~~~~~~~~lg~~LA~LH~ 116 (288)
T PF03881_consen 88 FLLLEFLEM-G----------SPSPPDWEELGRQLAALHQ 116 (288)
T ss_dssp EEEEE-------------------CCHHHHHHHHHHHHHH
T ss_pred eEEEEeecC-C----------CCCchhHHHHHHHHHHHhh
Confidence 899999973 2 1123468999999999999
No 17
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=98.67 E-value=1.6e-07 Score=67.50 Aligned_cols=103 Identities=21% Similarity=0.191 Sum_probs=78.8
Q ss_pred eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT--MSLIG 113 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~--~~~~v 113 (165)
.+++++.|..|.||++...++.++||+..+... ..+...|..+|+.+... +..+|+++.+... ...++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~---------~~~~~~e~~~~~~l~~~-~~~~p~~~~~~~~~~~~~~v 71 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREK---------GADREREVAILQLLARK-GLPVPKVLASGESDGWSYLL 71 (155)
T ss_pred cceecccccccceEEEEecCCeEEEEecCCCCc---------hhHHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCccEEE
Confidence 357899999999999998767899998754322 46788899999999876 6788999888765 79999
Q ss_pred EecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
||+++. ..+... .....+..+.++++.|+.+|..+
T Consensus 72 ~e~~~g--~~~~~~--~~~~~~~~~~~~~~~l~~lh~~~ 106 (155)
T cd05120 72 MEWIEG--ETLDEV--SEEEKEDIAEQLAELLAKLHQLP 106 (155)
T ss_pred EEecCC--eecccC--CHHHHHHHHHHHHHHHHHHhCCC
Confidence 999973 233221 11223567899999999999764
No 18
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=98.66 E-value=4.4e-07 Score=75.84 Aligned_cols=127 Identities=12% Similarity=0.162 Sum_probs=91.8
Q ss_pred CccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHH
Q 048614 5 EFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFE 84 (165)
Q Consensus 5 ~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E 84 (165)
-|..++.+.+.++|...+. .+..+++++++|..|.+|+|++++|+.|+|...+. .+.++...|
T Consensus 3 ~~~~~~~~~l~~~l~~y~~--------~~~~~i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~---------~~~~~i~~e 65 (307)
T TIGR00938 3 VYTSVSDEEMSSFLDGYDL--------GELLSLKGIAEGVENSNYLLTTDVGRYILTLYEKR---------VKAEELPFF 65 (307)
T ss_pred ccccCCHHHHHHHHHhcCC--------CCceeccccCCccccceEEEEeCCCcEEEEEecCC---------CCHHHHHHH
Confidence 4788999999999986531 23457999999999999999988779999975431 124577788
Q ss_pred HHHHHHhhcc-CCCCCceEEEEc--------CCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614 85 ALALKEHGQL-CPDHVPEVYHFD--------RTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL 155 (165)
Q Consensus 85 ~~~L~~~~~~-~p~~vP~v~~~D--------~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~ 155 (165)
.++++.+.+. .| ||+++... .....++||++++ ..+. ...+..+.++|+.||++|..+.+|
T Consensus 66 ~~~l~~L~~~g~p--vp~~i~t~~g~~~~~~~g~~~~l~e~i~G--~~~~------~~~~~~~~~~G~~LA~lH~~~~~~ 135 (307)
T TIGR00938 66 LALTTHLAARGLP--VPKPVKSRDGRQLSTLAGKPACLVEFLQG--LSVG------RPTAMHCRPVGEVLAWMHLAGAHF 135 (307)
T ss_pred HHHHHHHHHCCCC--CCccccCCCCCeehhcCCeEEEEEEeCCC--CCCC------CCCHHHHHHHHHHHHHHHhhhccC
Confidence 8988887552 23 56665522 2334689999983 2331 124567899999999999999887
Q ss_pred ccC
Q 048614 156 YRT 158 (165)
Q Consensus 156 ~l~ 158 (165)
..+
T Consensus 136 ~~~ 138 (307)
T TIGR00938 136 PEN 138 (307)
T ss_pred CCC
Confidence 544
No 19
>PLN02876 acyl-CoA dehydrogenase
Probab=98.63 E-value=5.9e-07 Score=84.90 Aligned_cols=135 Identities=19% Similarity=0.249 Sum_probs=94.2
Q ss_pred ccCHhhHHHHHHhCC-CcccccCCCCCcceeEecCCCceeEEEEEEeCCC----eEEEeecCccccccCCCCCCChHHHH
Q 048614 8 PLDDKSLLEYIKATP-SLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG----SFVIKQALPYVRCIGESWPMTKERAY 82 (165)
Q Consensus 8 ~l~~~~v~~Yl~~~~-~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~ 82 (165)
.++.+.+..||+++. .+ +.+.+.++++.+++|.+|.+|+|+..++ .+|+|...+-.. ..+.....
T Consensus 17 ~~d~~~l~~~l~~~~~~~----~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~------~~~~~~~~ 86 (822)
T PLN02876 17 RFDEDALLRYAAANVAGF----PVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKL------LQSAHAVE 86 (822)
T ss_pred cCCHHHHHHHHHHhCCCc----CCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCcc------CccHHHHH
Confidence 588899999999752 11 1123347999999999999999987653 678887654321 22345778
Q ss_pred HHHHHHHHhhccCCCCCceEEEEcCC-----CceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcccc
Q 048614 83 FEALALKEHGQLCPDHVPEVYHFDRT-----MSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 83 ~E~~~L~~~~~~~p~~vP~v~~~D~~-----~~~~vMEdL~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~tsd 154 (165)
.|+++|+.++......||++|.+..+ ...+|||+++. .++.+....+.. ...++.++++.|+++|...-+
T Consensus 87 rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G--~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~ 164 (822)
T PLN02876 87 REYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEG--RIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVD 164 (822)
T ss_pred HHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCC--cccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCch
Confidence 99999999976545679999998554 45689999983 344332111111 124788999999999997643
No 20
>PRK10593 hypothetical protein; Provisional
Probab=98.61 E-value=1.4e-07 Score=79.24 Aligned_cols=108 Identities=14% Similarity=0.090 Sum_probs=79.0
Q ss_pred ceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC-----CC
Q 048614 35 LTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR-----TM 109 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~-----~~ 109 (165)
.+++++++|..|-||++.+.+++++||..... .+.+-...|++.|+.+++.....||+++..-. ..
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~---------~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~ 87 (297)
T PRK10593 17 SRVECISEQPYAALWALYDSQGNPMPLMARSF---------STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGP 87 (297)
T ss_pred heeeecCCccceeEEEEEcCCCCEEEEEeccc---------ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCC
Confidence 48999999999999999988778888985421 12357889999999998865578999997532 44
Q ss_pred ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614 110 SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts 153 (165)
..+|||++.. .++.+..........+++.+|+.||++|..++
T Consensus 88 ~~LVmE~i~G--~~~~~~~~~~~~~~~l~~~l~~~La~LH~~~~ 129 (297)
T PRK10593 88 DVLLLERLRG--VSVEAPARTPERWEQLKDQIVEGLLAWHRIDS 129 (297)
T ss_pred eEEEEeccCC--EecCCCCCCHHHHHHHHHHHHHHHHHHhCCCh
Confidence 8999999983 34333111111123567778899999999754
No 21
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.59 E-value=2.8e-07 Score=74.93 Aligned_cols=101 Identities=14% Similarity=0.148 Sum_probs=73.6
Q ss_pred eEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 048614 37 IKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRY 116 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEd 116 (165)
|.+++||..|.+||++.+++++|+|...+-.+ .+..+| ..|+++|+.+++. +.+|+++++|+ ..+|||+
T Consensus 1 ~~~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~------~~~~~r-~~E~~~l~~l~~~--g~~P~~i~~~~--~~~v~e~ 69 (256)
T TIGR02721 1 VQTLSGGLTNRSWRIEHPGISFVWRPQSPVCK------ALGVDR-QREYQILQALSAL--GLAPKPILVNE--HWLLVEW 69 (256)
T ss_pred CCcCCCcCcCCeEEEEeCCccEEEeeCCcccc------cccCcH-HHHHHHHHHHHhc--CCCCceEEEeC--CEEEEEe
Confidence 45789999999999996655999997554322 122334 6699999999874 24899999986 5799999
Q ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614 117 LEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 117 L~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts 153 (165)
++ + ..+... ....+....++++.|+++|....
T Consensus 70 i~-G-~~~~~~---~~~~~~~~~~la~~l~~lH~~~~ 101 (256)
T TIGR02721 70 LE-G-EVITLD---QFVALDLLLELAALLHQLHSQPR 101 (256)
T ss_pred cc-C-cccccc---cccCchhHHHHHHHHHHHhCCCC
Confidence 98 3 344321 11245678999999999998764
No 22
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=98.56 E-value=6.5e-07 Score=73.87 Aligned_cols=120 Identities=15% Similarity=0.124 Sum_probs=85.7
Q ss_pred hhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHh
Q 048614 12 KSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEH 91 (165)
Q Consensus 12 ~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~ 91 (165)
+.+..++..-+ ..+..+++++.+|..|.+|+|.+.++++|+|...+ -+.++...|.++++.+
T Consensus 2 ~~l~~~l~~y~--------~~~~~~i~~i~~G~~n~~y~v~~~~~~~vLr~~~~----------~~~~~~~~e~~~l~~L 63 (296)
T cd05153 2 EELASFLADYD--------LGELLSFEGISAGIENTNYFVTTDSGRYVLTLFEK----------VSAEELPFFLALLDHL 63 (296)
T ss_pred HHHHHHHHHcC--------CCchhheecccCccccceEEEEeCCCcEEEEEcCC----------CChHhccHHHHHHHHH
Confidence 34556666543 12345899999999999999998877999997654 1236788899999988
Q ss_pred hccCCCCCceEEEEcC--------CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccC
Q 048614 92 GQLCPDHVPEVYHFDR--------TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT 158 (165)
Q Consensus 92 ~~~~p~~vP~v~~~D~--------~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~ 158 (165)
++. .-.+|+++.... ....++|+++++ ..+.. ..+....++|+.||++|..++++..+
T Consensus 64 ~~~-g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G--~~~~~------~~~~~~~~lg~~La~lH~~~~~~~~~ 129 (296)
T cd05153 64 AER-GLPVPRPIADRDGEYLSELAGKPAALVEFLAG--EHLTR------PTAAHCRQIGEALARLHLAAQSFPGE 129 (296)
T ss_pred HHC-CCCCCccccCCCCcEeeeeCCceEEEEEeCCC--CCCCC------CCHHHHHHHHHHHHHHHHHhccCCcc
Confidence 764 223677665432 334689999983 23311 34678999999999999998877554
No 23
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=98.53 E-value=4.1e-07 Score=75.45 Aligned_cols=104 Identities=15% Similarity=0.117 Sum_probs=76.3
Q ss_pred ceeEecCCCceeEEEEEEeCC-------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc
Q 048614 35 LTIKEVGDGNLNFVYIVVGSS-------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD 106 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rv~~~~-------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D 106 (165)
+++++++||..|.+|+|+..+ + ++|+|... .+..... ....|+++++.+++.- .+|++++++
T Consensus 1 ~~i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~-------~~~~~~~-~r~~E~~~~~~l~~~g--~~P~~~~~~ 70 (302)
T cd05156 1 LEVSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYG-------QSVELLI-DRERELVVFARLSERN--LGPKLYGIF 70 (302)
T ss_pred CeEEEecCcccceeEEEEcCCcccccCCCCeEEEEEec-------CCCccee-chHHHHHHHHHHHhCC--CCCceEEEe
Confidence 468999999999999999765 3 77777733 2222222 3478999999998753 589999999
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL 155 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~ 155 (165)
+. ..|||++. +. .+....+ ..|..+.++|..|+++|......
T Consensus 71 ~~--~~v~e~i~-G~-~l~~~~~---~~~~~~~~ia~~L~~lH~~~~~~ 112 (302)
T cd05156 71 PN--GRIEEFIP-SR-TLTTEEL---RDPDISAEIARRMAKLHSIVVPL 112 (302)
T ss_pred CC--CchhheeC-CC-cCCHhHc---CCcHHHHHHHHHHHHhhCCCCCC
Confidence 74 56899998 33 4433322 24678999999999999987653
No 24
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.41 E-value=1.5e-06 Score=70.38 Aligned_cols=102 Identities=16% Similarity=0.092 Sum_probs=75.9
Q ss_pred eEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEE
Q 048614 37 IKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIGM 114 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~vM 114 (165)
.+++++|..|.||+.. ++++|+|...+.. +..+...|+++|+.+... +-.||+++++ |.+...++|
T Consensus 6 ~~~i~~G~t~~~y~~~--~~~~VlR~~~~~~---------~~~~i~~E~~~l~~l~~~-glpvP~~~~~~~~~~~~glv~ 73 (226)
T TIGR02172 6 WTQTGEGGNGESYTHK--TGKWMLKLYNPGF---------DKETIKREFDASRKVFSL-GIPTPHPFDLVEDGGRLGLIY 73 (226)
T ss_pred heeecCCCCcceeEec--CCCEEEEeCCCCC---------CHHHHHHHHHHHHHHHHc-CCCCCceEEEEecCCeeeeee
Confidence 4789999999999853 3389999987533 335678899999998854 6678999999 666678899
Q ss_pred ecCCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHhc
Q 048614 115 RYLEPPHIILRKGLIAGI-KYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~-~~~~~a~~iG~~La~~h~~ 151 (165)
|.++ +...+...+.... ..+.++..+|..++++|..
T Consensus 74 e~i~-G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~ 110 (226)
T TIGR02172 74 ELIV-GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHST 110 (226)
T ss_pred eecC-CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCC
Confidence 9998 3333433333222 2246899999999999974
No 25
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.40 E-value=1.4e-06 Score=70.01 Aligned_cols=102 Identities=17% Similarity=0.111 Sum_probs=74.6
Q ss_pred eEecC-CCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----Cc
Q 048614 37 IKEVG-DGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT-----MS 110 (165)
Q Consensus 37 v~~l~-~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~-----~~ 110 (165)
++++. ||..|.||++. +++|+|...+.. +..+...|+++|+.+.+.++..+|+++...+. ..
T Consensus 2 ~~~~~~gG~~n~vy~~~---~~~VlR~~~~~~---------~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~ 69 (235)
T cd05155 2 IEPVDSGGTDNATFRLG---DDMSVRLPSAAG---------YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWP 69 (235)
T ss_pred ceeccCCCcccceEEcC---CceEEEcCCccc---------hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcc
Confidence 45565 89999999983 378889755321 23578899999999987667889999987654 23
Q ss_pred eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 048614 111 LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd 154 (165)
.++||+++ +.++...... ....+++++|++|+++|..+..
T Consensus 70 ~~l~~~i~--G~~l~~~~~~--~~~~l~~~la~~l~~LH~i~~~ 109 (235)
T cd05155 70 WSVYRWLE--GETATAAALS--DPSEFAEDLADFLAALRQIDPS 109 (235)
T ss_pred eEEEEeec--CCCCCccccC--CHHHHHHHHHHHHHHHhCCCcc
Confidence 67899998 4555443211 1237899999999999987653
No 26
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.35 E-value=7.8e-06 Score=66.65 Aligned_cols=114 Identities=13% Similarity=0.018 Sum_probs=81.7
Q ss_pred eEecC-CCceeEEEEEEeCCCeEEEeecCc-c--ccccCCC--C-CCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-
Q 048614 37 IKEVG-DGNLNFVYIVVGSSGSFVIKQALP-Y--VRCIGES--W-PMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT- 108 (165)
Q Consensus 37 v~~l~-~Gn~N~v~rv~~~~gsvIvKqa~p-~--~r~~~~~--~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~- 108 (165)
-..+| .|..|.||+|...++.++||+... - .++...+ | .....|...|++.|+.+... .-.||+++.+...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~-gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEA-GLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhC-CCCCceeEeeeeee
Confidence 34675 899999999999877999998852 1 1221111 1 35667899999999988663 2346777765221
Q ss_pred C-----ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 109 M-----SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~-----~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
. ..+|||+++ +...|.+.+.++........+|+.+|+.+|...
T Consensus 115 ~~~~~~~~lV~e~l~-G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~G 162 (239)
T PRK01723 115 HGLFYRADILIERIE-GARDLVALLQEAPLSEEQWQAIGQLIARFHDAG 162 (239)
T ss_pred cCcceeeeEEEEecC-CCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCC
Confidence 1 249999998 567788877776656678899999999999875
No 27
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=98.30 E-value=6.7e-06 Score=68.51 Aligned_cols=106 Identities=17% Similarity=0.080 Sum_probs=76.8
Q ss_pred cceeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 048614 34 ALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLI 112 (165)
Q Consensus 34 ~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~ 112 (165)
.-++...+.|.-|.||+|.+.+| .+|||++++ ..+ ..|...|+++|+.++..+|..+|+++..+.+ .+
T Consensus 13 ~~~~~~~~~g~~~~v~~i~~~~g~~~VlR~p~~-~~~--------~~~l~rE~~vL~~L~~~l~vpvP~~~~~~~~--~~ 81 (276)
T cd05152 13 PETLSLNESGLDFQVVFAKDTDGVPWVLRIPRR-PDV--------SERAAAEKRVLALVRKHLPVQVPDWRVHTPE--LI 81 (276)
T ss_pred CCcceecCCcceeEEEEEEcCCCCeEEEEecCC-HHH--------HHHHHHHHHHHHHHHhcCCCCCCceeeecCc--eE
Confidence 34667778888899999977656 999999952 221 2578899999999998778899998877765 46
Q ss_pred EEecCCCCch-----------HHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614 113 GMRYLEPPHI-----------ILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 113 vMEdL~~~~~-----------~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts 153 (165)
+|+.++. .. .|.... ....+.+|.++|++|+++|....
T Consensus 82 ~y~~i~G-~p~~~~~~~~~~~~~~~~~--~~~~~~la~~la~~La~LH~i~~ 130 (276)
T cd05152 82 AYPKLPG-VPAATIDPEIGEYVWNFDH--KNPPEVFIESLAKALAELHSIPQ 130 (276)
T ss_pred EEeccCC-CcccccCcccccceecccC--CCcCHHHHHHHHHHHHHHhCCCh
Confidence 7887773 21 111100 12346799999999999997664
No 28
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=98.19 E-value=1.6e-05 Score=68.07 Aligned_cols=131 Identities=15% Similarity=0.148 Sum_probs=96.9
Q ss_pred cccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHH
Q 048614 7 RPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEAL 86 (165)
Q Consensus 7 ~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~ 86 (165)
..++...+..||..+- + + -.+...+++.++|.+|.+|++.+.+.++||- ..|.... ..+.++...|++
T Consensus 6 ~~~~~~~l~~~l~~~i--p---~-~~~~~~v~~~~~G~sn~t~~~~~~~~~~vlR-~P~~~~~-----~~~~~~~~re~~ 73 (321)
T COG3173 6 VALDIAALAAYLRSQI--P---G-YAGLLIVEEISGGWSNDTFRLGDTGQKYVLR-KPPRGDP-----VESAHDEKREYR 73 (321)
T ss_pred ccCCHHHHHHHHHhhC--c---C-cCCCceeeeccCCcccceEEEecCCceEEEe-cCCcccc-----chhhhHHHhHHH
Confidence 3567788899998641 1 1 2345688889999999999999885589988 5553433 245677778888
Q ss_pred HHHHhhccCCCCCceEEEEcCCCc----eEEEecCCCCchHHHHHHHcCCCCHHHHH-HHHHHHHHHHhcc
Q 048614 87 ALKEHGQLCPDHVPEVYHFDRTMS----LIGMRYLEPPHIILRKGLIAGIKYPLLAE-HMSEFMAKTLFYT 152 (165)
Q Consensus 87 ~L~~~~~~~p~~vP~v~~~D~~~~----~~vMEdL~~~~~~lr~~l~~g~~~~~~a~-~iG~~La~~h~~t 152 (165)
+|+.+... +..+|..+.+=.+.+ -+||+++. +...+..+..+.....++. ++|++||.+|.--
T Consensus 74 ~i~~l~~~-~vP~p~~~~~~~~~~~g~pf~v~~~ve--Ge~~~~~~~~~~~~~~~~~~~l~~~La~LH~id 141 (321)
T COG3173 74 VIAALLDV-DVPVPRAFGLCGEGYLGTPFYVMEWVE--GEVVWSALPPESLGRQFALDALADFLAELHSID 141 (321)
T ss_pred HHHHhcCC-CCCCcccccccccCCCCCceEEEEEec--ceeccCcCCcccchHHHHHHHHHHHHHHHhCCC
Confidence 88888776 778888888888888 99999998 3344454444433345666 9999999999865
No 29
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.14 E-value=1.2e-05 Score=72.42 Aligned_cols=110 Identities=24% Similarity=0.151 Sum_probs=83.4
Q ss_pred eEecCCCceeEEEEEEeCCCeEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 048614 37 IKEVGDGNLNFVYIVVGSSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMR 115 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vME 115 (165)
.+.+|.|....||++...++.+++|...+.. +....++....+|...|+++|+.+... ...+|.++..+++...+|||
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~~~~~lv~E 416 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRA-GVPTPVIYDVDPEEKTIVME 416 (535)
T ss_pred cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhccc-CCCeeEEEEEeCCCCEEEEE
Confidence 4677999999999998776677777766543 222224456678899999999988642 34568889999999999999
Q ss_pred cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
|++ ...|.+.+. ....++.+++..|+.+|...
T Consensus 417 ~~~--g~~L~~~l~---~~~~~~~~i~~~L~~lH~~g 448 (535)
T PRK09605 417 YIG--GKDLKDVLE---GNPELVRKVGEIVAKLHKAG 448 (535)
T ss_pred ecC--CCcHHHHHH---HHHHHHHHHHHHHHHHHhCC
Confidence 997 457777664 23568999999999999864
No 30
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.13 E-value=4e-05 Score=62.81 Aligned_cols=107 Identities=10% Similarity=-0.025 Sum_probs=76.5
Q ss_pred eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHH------HHHHHHHHHHhhccCCCCCceEEEEcCC-
Q 048614 36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKER------AYFEALALKEHGQLCPDHVPEVYHFDRT- 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R------~~~E~~~L~~~~~~~p~~vP~v~~~D~~- 108 (165)
.++.+++|-.+.||.+.+..+.+|||+=.|..... +.-..| ...|+..+..+... .-.+|..++.|++
T Consensus 35 ~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~----~~~~~~f~~g~~~e~Ea~~l~rL~~~-GI~~~~d~~~~~~~ 109 (232)
T PRK10359 35 TIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRT----ERFLKSFVKGDYYENLIVQTDRVRSE-GLASLNDFYLLAER 109 (232)
T ss_pred EEEEecCCCceEEEEEecCCCcEEEEEechhcCch----HHHHHhhhhhHHHHHHHHHHHHHHHC-CCCcceEeeeeccc
Confidence 78899999999999988754599999988776421 112233 34565567766442 4467777877765
Q ss_pred -------CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 109 -------MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 -------~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
...++|||++ +..|++.. ........+++..|+.+|...
T Consensus 110 ~~~~~~~~~~lvmEyi~--G~tL~~~~---~~~~~~~~~i~~~l~~lH~~g 155 (232)
T PRK10359 110 KTLRYAHTYIMLIEYIE--GVELNDMP---EISEDVKAKIKASIESLHQHG 155 (232)
T ss_pred ccccccCCeEEEEEEEC--CccHHHhh---hccHHHHHHHHHHHHHHHHcC
Confidence 4788999998 45776652 234567889999999999753
No 31
>PLN02236 choline kinase
Probab=98.02 E-value=3e-05 Score=66.44 Aligned_cols=123 Identities=10% Similarity=0.044 Sum_probs=84.9
Q ss_pred HhhHHHHHHhCC-CcccccCCCCCcceeEecCCCceeEEEEEEeCC-----C-eEEEeecCccccccCCCCCCChHHHHH
Q 048614 11 DKSLLEYIKATP-SLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSS-----G-SFVIKQALPYVRCIGESWPMTKERAYF 83 (165)
Q Consensus 11 ~~~v~~Yl~~~~-~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~-----g-svIvKqa~p~~r~~~~~~~l~~~R~~~ 83 (165)
+.++...+++.. ... ++ .+.+.++++++.||..|.+|+|+..+ + ++|+|.-.+.. .+-.+| ..
T Consensus 16 ~~~~~~~~~~~~~~w~-~~-~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t-------~~~idR-~~ 85 (344)
T PLN02236 16 PDELKRILHSLASKWG-DV-VDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV-------ELFFDR-DD 85 (344)
T ss_pred hHHHHHHHHHhcchhc-CC-CCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC-------Ceeech-HH
Confidence 445666666531 111 00 13467899999999999999997431 2 68877655432 344567 78
Q ss_pred HHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 84 EALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 84 E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
|..+++.+++. +..|+++++++.. .|.||+. ...|...-+ ..|.+..+++..|+++|...
T Consensus 86 E~~~~~~l~~~--gl~P~~~~~~~~g--~v~efi~--g~~l~~~~l---~~~~~~~~ia~~L~~lH~~~ 145 (344)
T PLN02236 86 EIRTFECMSRH--GQGPRLLGRFPNG--RVEEFIH--ARTLSAADL---RDPEISALIAAKLREFHSLD 145 (344)
T ss_pred HHHHHHHHHHc--CCCCceEEEECCc--eEEEeeC--CCCCCHHHc---CChHHHHHHHHHHHHHhCCC
Confidence 99999998884 5689999998543 7899996 345543221 35678999999999999854
No 32
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.97 E-value=4.8e-05 Score=64.77 Aligned_cols=105 Identities=11% Similarity=0.093 Sum_probs=76.5
Q ss_pred CCCcceeEecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 048614 31 KFDALTIKEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF 105 (165)
Q Consensus 31 ~~~~~~v~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~ 105 (165)
+.++++++++.||..|.+|||+..+ + ++|||.-.+.. + .-.+| ..|..+++.+++. +..|+++++
T Consensus 13 ~~~~i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t-----~--~~IdR-~~E~~il~~l~~~--gl~P~~l~~ 82 (330)
T PLN02421 13 DDSDFSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNT-----D--YVIDR-ERELQAIKYLSAA--GFGAKLLGV 82 (330)
T ss_pred CcCceEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCc-----C--eEech-HHHHHHHHHHHhc--CCCCceeEE
Confidence 4568999999999999999997543 1 68877655432 2 23445 5699999998874 567999998
Q ss_pred cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 106 DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
++ +. +|.+++. +..|...-+ ..|.....|+..|+++|...
T Consensus 83 ~~-~G-~i~~fi~--g~~l~~~~l---~~~~~~~~ia~~L~~lH~~~ 122 (330)
T PLN02421 83 FG-NG-MIQSFIN--ARTLTPSDM---RKPKVAAEIAKELRRLHQVE 122 (330)
T ss_pred eC-Cc-Eeehhhc--CCCCChHHC---CCHHHHHHHHHHHHHHhCCC
Confidence 84 44 5899996 345533111 34678999999999999854
No 33
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=97.95 E-value=0.00011 Score=58.25 Aligned_cols=94 Identities=18% Similarity=0.075 Sum_probs=74.4
Q ss_pred eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC------CceEEEecCCCCchHHHHHHHc
Q 048614 57 SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT------MSLIGMRYLEPPHIILRKGLIA 130 (165)
Q Consensus 57 svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~------~~~~vMEdL~~~~~~lr~~l~~ 130 (165)
++.+|.-..++...---.++...|...|++.++.+.+. ...||+++.|... .+.+|||+++ +...|.+.+.+
T Consensus 34 ~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~-Gi~tP~pva~~~~r~~~~~~s~lite~l~-~~~~L~~~~~~ 111 (206)
T PF06293_consen 34 RYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREA-GIPTPEPVAYGERRKGGGYRSYLITEALP-GAQDLRDLLQQ 111 (206)
T ss_pred EEEECCeechhccchhhhcccchHHHHHHHHHHHHHHc-CCCCCcEEEEEEEcCCCceeEEEEEEeCC-CcccHHHHHHh
Confidence 78888766655321123458889999999999999885 6679999999887 4589999998 68899888876
Q ss_pred -----CCCCHHHHHHHHHHHHHHHhcc
Q 048614 131 -----GIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 131 -----g~~~~~~a~~iG~~La~~h~~t 152 (165)
......+..++|.+++++|...
T Consensus 112 ~~~~~~~~~~~ll~~l~~~i~~lH~~g 138 (206)
T PF06293_consen 112 WEQLDPSQRRELLRALARLIAKLHDAG 138 (206)
T ss_pred hcccchhhHHHHHHHHHHHHHHHHHCc
Confidence 3344689999999999999875
No 34
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.93 E-value=0.0001 Score=61.16 Aligned_cols=99 Identities=18% Similarity=0.161 Sum_probs=76.6
Q ss_pred CcceeEecCCCceeEEEEEEeCCCeEEEeecC-ccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--CC
Q 048614 33 DALTIKEVGDGNLNFVYIVVGSSGSFVIKQAL-PYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR--TM 109 (165)
Q Consensus 33 ~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~-p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--~~ 109 (165)
+--+.++++||-+|--|||++....+.||.-. +++. =...|+.-|+.+++.-...||++|..+. ..
T Consensus 17 ~i~er~~v~gG~inea~~v~dg~~~~FvK~n~~~~~~-----------~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~ 85 (286)
T COG3001 17 EIKEREEVSGGDINEAWRLRDGTDPFFVKCNQREQLS-----------MFTAEADGLELLARSNTITVPKVIAVGASRDH 85 (286)
T ss_pred hhhcccccCCccccceeEeecCCcceEEEecchhhHH-----------HHHHHHHHHHHHHhcCCccccceEEecCCCCe
Confidence 34488999999999999999886677777432 2221 2345666688888876789999998876 45
Q ss_pred ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614 110 SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts 153 (165)
+.+|||||+. |..++.-+.++|.-||++|..+.
T Consensus 86 sylVle~L~~-----------~~~d~~~~~~~GqqLA~LH~~~~ 118 (286)
T COG3001 86 SYLVLEYLPT-----------GPLDAHSAFILGQQLARLHQWGG 118 (286)
T ss_pred eEEEEeeccC-----------CCCCchhHHHHHHHHHHHHhhcC
Confidence 7899999982 44567778999999999999875
No 35
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=97.87 E-value=0.0002 Score=59.68 Aligned_cols=111 Identities=14% Similarity=-0.009 Sum_probs=75.4
Q ss_pred eEecCCCceeEEEEEEeCCCeEEEeecCcccc--ccCCC--CCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC-----
Q 048614 37 IKEVGDGNLNFVYIVVGSSGSFVIKQALPYVR--CIGES--WPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR----- 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r--~~~~~--~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~----- 107 (165)
+++..+.+ |+|+...+..+.||+-.+... ....- +..|..+...|++.+..+.+. ...||+++.|-.
T Consensus 30 v~~~~~rr---vvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~-GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 30 FRELEGRR---TLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEV-GVDTMTGVAFGERGSNP 105 (268)
T ss_pred EecCCCce---EEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHc-CCCCCCeeEEEEecCCC
Confidence 34444444 678887655999998765541 11111 123445789999999999886 666777755542
Q ss_pred --CCceEEEecCCCCchHHHHHHHcC---CCC----HHHHHHHHHHHHHHHhcc
Q 048614 108 --TMSLIGMRYLEPPHIILRKGLIAG---IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 --~~~~~vMEdL~~~~~~lr~~l~~g---~~~----~~~a~~iG~~La~~h~~t 152 (165)
..+.+|||+++ +..++++.+.+. ... ..+..++|.+++++|...
T Consensus 106 ~~~~s~LVte~l~-~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G 158 (268)
T PRK15123 106 ATRTSFIITEDLA-PTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG 158 (268)
T ss_pred ccceeEEEEeeCC-CCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 34789999999 677888887532 111 257789999999999875
No 36
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=97.83 E-value=0.00022 Score=61.26 Aligned_cols=131 Identities=15% Similarity=0.137 Sum_probs=94.7
Q ss_pred CCCCccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHH
Q 048614 2 AFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERA 81 (165)
Q Consensus 2 ~~~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~ 81 (165)
.+..|..++.+++.+.|...+. ..+.+...+.. .-|.+|+|.+.+|+.|||-..|- +. ..-.
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~--------g~~~~~~~l~s-~eN~~f~~~~~~g~~iLki~~~~-~~--------~~~i 65 (331)
T COG2334 4 SMAVFTPLTSDEAAAALEAYHY--------GLDGSLRGLNS-EENSNFRVQTEDGRYILKIYRPG-WT--------RAEI 65 (331)
T ss_pred ccccccCcChHHHHHHHHhcCc--------Ccccccccccc-ccCceEEEEecCCCeEEEEecCC-CC--------HHHH
Confidence 4567899999999999987542 22345666666 88999999999997799998865 32 2467
Q ss_pred HHHHHHHHHhhcc-CCCCCceEEEEc-------C--CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 048614 82 YFEALALKEHGQL-CPDHVPEVYHFD-------R--TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 82 ~~E~~~L~~~~~~-~p~~vP~v~~~D-------~--~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ 151 (165)
..|-++|+.+.+- +|..+| +-.-| . .-..-+.|+++ +..+.. ..-...++.+|++||++|..
T Consensus 66 ~~el~~l~~La~~~i~v~~P-l~~~dG~~l~~~~~~~r~a~lf~~l~--G~~~~~-----~~~~~~~~~lG~~LgrlH~a 137 (331)
T COG2334 66 PFELALLQHLAERGIPVPAP-LPSLDGELLEALSGGPRPAALFEYLP--GRPLER-----DDNAEQLEELGRMLGRLHLA 137 (331)
T ss_pred HHHHHHHHHHHHcCCCCCCC-ccCCCcchhhhccCCceeEEEEEecC--CcCcCC-----CCcHHHHHHHHHHHHHHHHH
Confidence 7888899988773 344444 22222 1 25677889998 445543 34567899999999999999
Q ss_pred ccccccC
Q 048614 152 TSLLYRT 158 (165)
Q Consensus 152 tsd~~l~ 158 (165)
+.+|-+.
T Consensus 138 ~~~f~~~ 144 (331)
T COG2334 138 LRGFPFE 144 (331)
T ss_pred hCcCCcc
Confidence 9999753
No 37
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=97.78 E-value=0.0004 Score=54.15 Aligned_cols=109 Identities=17% Similarity=0.043 Sum_probs=71.6
Q ss_pred EecCCCceeEEEEEEeCCC-eEEEeecCccccccCC---------C-------C---CCChHHHHHHHHHHHHhhccCCC
Q 048614 38 KEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGE---------S-------W---PMTKERAYFEALALKEHGQLCPD 97 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~---------~-------~---~l~~~R~~~E~~~L~~~~~~~p~ 97 (165)
.++|.|..-.||++.+.+| .++||.-.+-...... . + .+...+...|++.|+.+... ..
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i 81 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA-GV 81 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 4688999999999998767 8999987765321000 0 0 01133456788888887653 34
Q ss_pred CCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHh
Q 048614 98 HVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 98 ~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~ 150 (165)
.+|.++.++ ..++||||++. .......+.++... ..++.++...|..+|.
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g-~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~ 135 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGD-DGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQ 135 (190)
T ss_pred CCceEEEec--CCEEEEEEecC-CCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 678888765 36899999983 32222223333332 4678889999999998
No 38
>PTZ00384 choline kinase; Provisional
Probab=97.72 E-value=0.00041 Score=60.60 Aligned_cols=126 Identities=13% Similarity=0.094 Sum_probs=81.9
Q ss_pred hhHHHHHHh-CCCcccccCCCCCcceeEecCCCceeEEEEEEeCCC---eEEEeecCccccccCCCCCCChHHHHHHHHH
Q 048614 12 KSLLEYIKA-TPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG---SFVIKQALPYVRCIGESWPMTKERAYFEALA 87 (165)
Q Consensus 12 ~~v~~Yl~~-~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~ 87 (165)
.++...+++ .|.++ ..+.+.+++++++||-.|.+|+|+.+++ ...+|.-+ +|..|..-.+-.+| ..|.++
T Consensus 32 ~~~~~~~~~~~p~w~---~~~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl--~R~~g~~~~l~IdR-~~E~~i 105 (383)
T PTZ00384 32 SNLKSLCIRHVPFWN---NVNPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVC--IKKSSTYNSLVIDN-DLQYNI 105 (383)
T ss_pred HHHHHHHHHHCCccc---cCCcccEEEEEeCCcccceEEEEEecCCCCCccccceEE--EEeccCCCceEecc-HHHHHH
Confidence 445555554 23221 1145678999999999999999986532 23223211 12222332344455 567888
Q ss_pred HHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 88 LKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 88 L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
++.+++ -+..|++|+.++ +.++.|++.. ..+-..- -..|.+...|+..||++|...
T Consensus 106 ~~~Ls~--~glgP~l~~~f~--~g~l~efIeG--r~l~~~d---l~~p~~~~~IA~~La~lH~~~ 161 (383)
T PTZ00384 106 AKLLGD--NNFGPKIIGRFG--DFTIQEWVEG--NTMGIDS---LQNLSVLTGIASSLAKFHKRV 161 (383)
T ss_pred HHHHHh--CCCCCeEEEecC--CEEEEEEecc--ccCChhH---hcCHHHHHHHHHHHHHHhccc
Confidence 888776 367899999996 4699999983 3443311 135778999999999999964
No 39
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=97.70 E-value=0.00014 Score=60.13 Aligned_cols=109 Identities=17% Similarity=0.040 Sum_probs=69.7
Q ss_pred CCCceeEEEEEEeC------CC----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhc----cCC------CCCc
Q 048614 41 GDGNLNFVYIVVGS------SG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQ----LCP------DHVP 100 (165)
Q Consensus 41 ~~Gn~N~v~rv~~~------~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~----~~p------~~vP 100 (165)
|+|++..+|||+.. ++ ++|||-...-... .+..-...=...|..+++.+.. +.+ ..+|
T Consensus 2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~--~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P 79 (294)
T PF02958_consen 2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSR--REFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFP 79 (294)
T ss_pred CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhh--hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeec
Confidence 78999999999762 11 8999997621110 1122223344566666654432 222 3589
Q ss_pred eEEEEcCCC--ceEEEecCCC-CchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 048614 101 EVYHFDRTM--SLIGMRYLEP-PHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 101 ~v~~~D~~~--~~~vMEdL~~-~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd 154 (165)
++|+.+.+. .++|||||.. ++... .. .......-++.+-+.||++|..+-.
T Consensus 80 ~~~~~~~~~~~~~lvlEDL~~~g~~~~-~~--~~~l~~~~~~~~l~~LA~fHA~s~~ 133 (294)
T PF02958_consen 80 KCYYADEDPGDEVLVLEDLSEKGYRMG-DR--RDGLDLEHAELVLKKLAKFHAASWA 133 (294)
T ss_pred eEEEeccCCCceeeehhhhhhcCCccc-cc--ccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999988664 5999999985 33332 11 1124567789999999999998754
No 40
>PRK11768 serine/threonine protein kinase; Provisional
Probab=97.63 E-value=0.0013 Score=55.91 Aligned_cols=125 Identities=14% Similarity=0.075 Sum_probs=81.5
Q ss_pred CccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHH
Q 048614 5 EFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYF 83 (165)
Q Consensus 5 ~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~ 83 (165)
.|..||++.|.+-|...|... +-.+.. -++.-|.||+|.+.+| .+|+|...|-- | +.+-...
T Consensus 7 ~~~~l~p~~~~~a~~~~g~~~--------~~~~~~-l~s~eN~vy~v~~~~~~~~vlKv~r~~~------~--~~~~i~~ 69 (325)
T PRK11768 7 PFQTLTPDLILDALESLGLRV--------DGRLLA-LNSYENRVYQFGDEDGRRVVAKFYRPER------W--SDAQILE 69 (325)
T ss_pred CCCCCChHHHHHHHHHcCCCC--------ccceEe-eccccceEEEEecCCCCEEEEEEcCccc------C--CHHHHHH
Confidence 789999999999998775431 112333 3456699999998877 89999876432 2 3455778
Q ss_pred HHHHHHHhhcc-CCCCCce------EEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614 84 EALALKEHGQL-CPDHVPE------VYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL 155 (165)
Q Consensus 84 E~~~L~~~~~~-~p~~vP~------v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~ 155 (165)
|.+++..+.+. +|...|. +..++ ...+.+++++++ . .. ....+...+++|.+||++|..+...
T Consensus 70 E~~~l~~L~~~gipv~~p~~~~G~~~~~~~-g~~~~l~~~~~G-~-~~------~~~~~~~~~~lG~~LarlH~~~~~~ 139 (325)
T PRK11768 70 EHAFALELAEAEIPVVAPLAFNGQTLHEHQ-GFRFALFPRRGG-R-AP------ELDNLDQLEWVGRFLGRIHQVGAKR 139 (325)
T ss_pred HHHHHHHHHHCCCCCCCCccCCCCEEEEEC-CEEEEEEeeeCC-C-CC------CCCCHHHHHHHHHHHHHHHhhccCC
Confidence 89998888663 4543331 12221 234556666662 1 11 1123567899999999999977643
No 41
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=97.62 E-value=0.00022 Score=56.60 Aligned_cols=99 Identities=23% Similarity=0.224 Sum_probs=58.3
Q ss_pred EEEEEeCCC-eEEEeecCccccc----------c--------CCCC-CCChHHHHHHHHHHHHhhccCCCCCceEEEEcC
Q 048614 48 VYIVVGSSG-SFVIKQALPYVRC----------I--------GESW-PMTKERAYFEALALKEHGQLCPDHVPEVYHFDR 107 (165)
Q Consensus 48 v~rv~~~~g-svIvKqa~p~~r~----------~--------~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~ 107 (165)
||.+.+++| .++||-=+..... . ...| .+...|+..|++.|+.+.+. ...||++|.++
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~-Gv~vP~p~~~~- 79 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEA-GVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCT-T-SS--EEEEE-
T ss_pred EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHC-CccCCcEEEEe-
Confidence 677877767 7888865532110 0 0122 45667888999999988886 56799999665
Q ss_pred CCceEEEecCCCCc---hHHHHHHHcCCCCHHHHHHHHHHHHHHH
Q 048614 108 TMSLIGMRYLEPPH---IILRKGLIAGIKYPLLAEHMSEFMAKTL 149 (165)
Q Consensus 108 ~~~~~vMEdL~~~~---~~lr~~l~~g~~~~~~a~~iG~~La~~h 149 (165)
.+++||||+++++ ..|++.-........+..++...+..++
T Consensus 80 -~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~ 123 (188)
T PF01163_consen 80 -RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKML 123 (188)
T ss_dssp -TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHH
Confidence 8999999998323 3344433222344577778777555543
No 42
>PRK09902 hypothetical protein; Provisional
Probab=97.58 E-value=0.0018 Score=52.70 Aligned_cols=106 Identities=11% Similarity=0.044 Sum_probs=81.7
Q ss_pred CceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhcc-CCCCCceEEEEcC------CCceEEEe
Q 048614 43 GNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQL-CPDHVPEVYHFDR------TMSLIGMR 115 (165)
Q Consensus 43 Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~-~p~~vP~v~~~D~------~~~~~vME 115 (165)
|-..=|+|+...+..+-|||-.-+++.. --.|++..=...|...|+.+.+. +| ||++.++.. -...+|.|
T Consensus 29 gG~SgV~r~~~~g~~~ylKrq~nhl~~s-~r~P~g~ptf~rE~~~L~~L~~~GvP--VP~pvf~~~~k~~~~~rA~LVTe 105 (216)
T PRK09902 29 NGMSGVQCVERNGKKLYVKRMTHHLFHS-VRYPFGRPTIVREVAVIKELERAGVI--VPKIVFGEAVKIEGEWRALLVTE 105 (216)
T ss_pred CCcceEEEEEeCCcEEEEEeccCccccc-ccCCCCchHHHHHHHHHHHHHHcCCC--CCccceeeeeccCCceEEEEEEE
Confidence 4555689998775589999999888642 22356666677899999999886 45 999997752 34899999
Q ss_pred cCCCCchHHHHHHHcCCCC-------HHHHHHHHHHHHHHHhcc
Q 048614 116 YLEPPHIILRKGLIAGIKY-------PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g~~~-------~~~a~~iG~~La~~h~~t 152 (165)
+|+ ++.+|-+.+.++... ..+-.++|..++++|...
T Consensus 106 ~L~-g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G 148 (216)
T PRK09902 106 DMA-GFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN 148 (216)
T ss_pred eCC-CCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC
Confidence 999 799997777665442 368899999999999876
No 43
>PRK06148 hypothetical protein; Provisional
Probab=97.56 E-value=0.002 Score=62.71 Aligned_cols=128 Identities=13% Similarity=0.160 Sum_probs=88.1
Q ss_pred ccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHH
Q 048614 8 PLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEAL 86 (165)
Q Consensus 8 ~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~ 86 (165)
.+|.+.+.+-+.++= +.. -+++++++. -|.+|+|+.++| .+|+|...|-. +......|.+
T Consensus 10 ~~s~~~~~~~~~~~y------gl~---~~~~~L~s~-~d~nf~v~~~~g~~yVLKi~~~~~---------~~~~~~~q~~ 70 (1013)
T PRK06148 10 EFTTKDAEALLAQHF------GIS---ATATPLDGE-RDLNFRLTTDDGADYILKIVNPSE---------PRVESDFQTA 70 (1013)
T ss_pred CCCHHHHHHHHHHHc------CCc---eEEeecCCc-CCceEEEEeCCCCeEEEEEcCCcc---------chhHHHHHHH
Confidence 478888888888752 111 256888655 599999998877 99999988631 2235556677
Q ss_pred HHHHhhccCCC-CCceEEEEcC----------C---CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 87 ALKEHGQLCPD-HVPEVYHFDR----------T---MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 87 ~L~~~~~~~p~-~vP~v~~~D~----------~---~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
+|..+.+-.|+ .||+++.-.. + ..+-+|++++ +..|.+. ....+....++|++||++|..+
T Consensus 71 ~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~vrLl~~l~--G~~l~~~---~~~t~~~~~~lG~~larlh~al 145 (1013)
T PRK06148 71 ALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRLLRLLSWLP--GTPLAEA---APRTEALLDNLGRALGRLDRAL 145 (1013)
T ss_pred HHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEEEEEEeccC--CCcHHhc---cCCCHHHHHHHHHHHHHHHHHH
Confidence 88877765333 3565553221 1 2466899998 3455431 3345789999999999999999
Q ss_pred cccccCc
Q 048614 153 SLLYRTT 159 (165)
Q Consensus 153 sd~~l~~ 159 (165)
++|.-+.
T Consensus 146 ~~F~~p~ 152 (1013)
T PRK06148 146 QGFMHPG 152 (1013)
T ss_pred hcCCCCC
Confidence 9987553
No 44
>smart00090 RIO RIO-like kinase.
Probab=97.50 E-value=0.001 Score=54.14 Aligned_cols=110 Identities=15% Similarity=0.028 Sum_probs=72.5
Q ss_pred EecCCCceeEEEEEE--eCCC-eEEEeecCccccccC--CCCC----------CC-----hHHHHHHHHHHHHhhccCCC
Q 048614 38 KEVGDGNLNFVYIVV--GSSG-SFVIKQALPYVRCIG--ESWP----------MT-----KERAYFEALALKEHGQLCPD 97 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~--~~~g-svIvKqa~p~~r~~~--~~~~----------l~-----~~R~~~E~~~L~~~~~~~p~ 97 (165)
+.+|.|..--||++. ..+| .++||...+-..... ..|. .+ ..+...|++.|+.+... ..
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~-~i 112 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEA-GV 112 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 579999999999998 4456 899998775331100 0010 01 12456799999888752 45
Q ss_pred CCceEEEEcCCCceEEEecCCCCchHHHHHHHc-CCC----CHHHHHHHHHHHHHHHhcc
Q 048614 98 HVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIA-GIK----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 98 ~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~-g~~----~~~~a~~iG~~La~~h~~t 152 (165)
.+|+++.+. .+.+|||+++. ..+...+.. +.. ...++.+|...|+.+|...
T Consensus 113 ~~p~~~~~~--~~~lV~E~~~g--~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g 168 (237)
T smart00090 113 PVPKPIAWR--RNVLVMEFIGG--DGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEG 168 (237)
T ss_pred CCCeeeEec--CceEEEEEecC--CcccccccccCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 678988764 56899999983 233222222 211 1268899999999999877
No 45
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=97.44 E-value=0.002 Score=50.53 Aligned_cols=109 Identities=15% Similarity=0.022 Sum_probs=67.2
Q ss_pred EecCCCceeEEEEEEeCCC-eEEEeecCccccccCCC--------C------C-----CChHHHHHHHHHHHHhhccCCC
Q 048614 38 KEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGES--------W------P-----MTKERAYFEALALKEHGQLCPD 97 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~--------~------~-----l~~~R~~~E~~~L~~~~~~~p~ 97 (165)
..+|.|..-.||++.+.+| .++||.-.+-......+ + . +...+...|++.|+.+... ..
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~v 81 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA-GI 81 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 3578899999999998777 89999876532111000 0 0 0012334588888888652 22
Q ss_pred CCceEEEEcCCCceEEEecCCCCchHHHHHHH-cCCCC----HHHHHHHHHHHHHH-Hhc
Q 048614 98 HVPEVYHFDRTMSLIGMRYLEPPHIILRKGLI-AGIKY----PLLAEHMSEFMAKT-LFY 151 (165)
Q Consensus 98 ~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~-~g~~~----~~~a~~iG~~La~~-h~~ 151 (165)
.+|.++.+ ..+.+||||++ + ..+....+ .+... ..++.+++..|+.+ |..
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~-g-~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~ 137 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIG-D-DGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC 137 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeC-C-CCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 46777654 45699999998 3 34433322 33222 24678888999988 553
No 46
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.43 E-value=0.0039 Score=49.65 Aligned_cols=105 Identities=19% Similarity=0.088 Sum_probs=74.2
Q ss_pred eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM 114 (165)
-.+.+|.|....||++.+..+ .+++|...+.- ...++...|..+|+.+.. |..+|-...+......++|
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~--------~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~v~ 79 (260)
T cd05069 10 LDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT--------MMPEAFLQEAQIMKKLRH--DKLVPLYAVVSEEPIYIVT 79 (260)
T ss_pred eeeeecCcCCCeEEEEEEcCCceEEEEEcccCC--------ccHHHHHHHHHHHHhCCC--CCeeeEEEEEcCCCcEEEE
Confidence 345688888888999988765 78888754321 233677788888887653 6667766677777888999
Q ss_pred ecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t 152 (165)
|+++ ...|.+.+.... .. -.++.++...|+.+|...
T Consensus 80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 122 (260)
T cd05069 80 EFMG--KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN 122 (260)
T ss_pred EcCC--CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9998 346666665422 11 357788999999999754
No 47
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=97.40 E-value=0.00061 Score=56.50 Aligned_cols=101 Identities=15% Similarity=0.047 Sum_probs=76.4
Q ss_pred ecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecC
Q 048614 39 EVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYL 117 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL 117 (165)
++.+|..++|+.|...+| ..|+|.+.|.-... .-..+..+|+.++- .-+.+++..|++..++.||.+
T Consensus 9 ~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~~~---------~E~~g~~~L~~w~G---~GaVrll~~d~~~~AlLLErl 76 (253)
T PF04655_consen 9 PPAHGSSSLVVPVRRADGTPAVLKLAPPHAEAE---------HEARGEAALRWWNG---RGAVRLLAADPERGALLLERL 76 (253)
T ss_pred CCCCCcceEEEEEEcCCCCeEEEEecCCcccch---------hhhhHHhHhheeCC---CCceeeeccccccchhhhhhc
Confidence 567999999999999888 89999999876532 11223355776644 234599999999999999999
Q ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614 118 EPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 118 ~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts 153 (165)
. ....|.+...+|. +......++..+.++|....
T Consensus 77 ~-~g~~L~~~~~~g~-d~~a~~i~a~l~~~L~~~~~ 110 (253)
T PF04655_consen 77 D-PGRSLASLPREGD-DDEATRIAAGLLRRLHRPAP 110 (253)
T ss_pred c-CCCchhhcccccC-chHHHHHHHHHHHHHhCCCC
Confidence 6 3678876554443 35668889999999998865
No 48
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=97.34 E-value=0.0025 Score=52.58 Aligned_cols=92 Identities=15% Similarity=0.059 Sum_probs=64.0
Q ss_pred EEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------cCCCceEEEecCC
Q 048614 47 FVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--------DRTMSLIGMRYLE 118 (165)
Q Consensus 47 ~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------D~~~~~~vMEdL~ 118 (165)
-||+|.+++|++|||... .+.++...|.+++..+.+-- ..||.++.- .......+||+++
T Consensus 11 ~v~~v~t~~g~~~LK~~~-----------~~~~~~~~~~~~~~~L~~~g-~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~ 78 (313)
T TIGR02906 11 NVYKVETDSGNKCLKKIN-----------YPPERLLFILGAQEHLRKNG-FNIPKILKTKDGELYVKYNGDLYVLTEWIE 78 (313)
T ss_pred cEEEEEeCCCCeEEEEcC-----------CCHHHHHHHHHHHHHHHHcC-CCCCceeecCCCCEEEEECCEEEEEehhcc
Confidence 499999888899999752 12367788888888876531 144444432 2345678899997
Q ss_pred CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccC
Q 048614 119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT 158 (165)
Q Consensus 119 ~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~ 158 (165)
+ ..+- ...+..+.++|+.||++|..+.++..+
T Consensus 79 G--~~~~------~~~~~~~~~~g~~La~lH~~~~~~~~~ 110 (313)
T TIGR02906 79 G--RECD------FNNPIDLKKAAKGLALFHHASKGYVPP 110 (313)
T ss_pred C--cCCC------CCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 3 2221 223667899999999999999988543
No 49
>PTZ00296 choline kinase; Provisional
Probab=97.32 E-value=0.0017 Score=57.78 Aligned_cols=105 Identities=14% Similarity=0.072 Sum_probs=75.9
Q ss_pred CCCcceeEecCCCceeEEEEEEeCCC----------eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc
Q 048614 31 KFDALTIKEVGDGNLNFVYIVVGSSG----------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP 100 (165)
Q Consensus 31 ~~~~~~v~~l~~Gn~N~v~rv~~~~g----------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP 100 (165)
+.++++++++.||-.|.+|+|+..++ ++++ |+.|++-..-.+| ..|..+++.+++. +..|
T Consensus 104 ~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lv-------RiyG~~te~lIdR-~~E~~v~~~ls~~--gi~P 173 (442)
T PTZ00296 104 TEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLF-------RIYGKDVDELYNP-ISEFEVYKTMSKY--RIAP 173 (442)
T ss_pred CcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEE-------EecCCCccceeCH-HHHHHHHHHHHHC--CCCC
Confidence 34578999999999999999986532 4544 4444433233355 5688999888874 6788
Q ss_pred eEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 101 ~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
++|.. ..+..+-|++. + ..|+..=+ ..|....+|+..|+++|...
T Consensus 174 ~l~~~--f~gg~I~efi~-g-~~l~~~dl---~~~~~~~~iA~~L~~lH~~~ 218 (442)
T PTZ00296 174 QLLNT--FSGGRIEEWLY-G-DPLRIDDL---KNPSILIGIANVLGKFHTLS 218 (442)
T ss_pred ceEEE--eCCCEEEEeeC-C-ccCCHHHc---CCHHHHHHHHHHHHHHhccc
Confidence 98854 46888999998 3 45544222 35788999999999999875
No 50
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=97.24 E-value=0.0052 Score=46.84 Aligned_cols=109 Identities=17% Similarity=0.125 Sum_probs=68.1
Q ss_pred EecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCC-----------------CCChHHHHHHHHHHHHhhccCCCCC
Q 048614 38 KEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESW-----------------PMTKERAYFEALALKEHGQLCPDHV 99 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~-----------------~l~~~R~~~E~~~L~~~~~~~p~~v 99 (165)
..+|.|+...||++.+.+| .++||.-.+-.......+ .+.......|.+.+..+... ...+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~ 81 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA-GVPV 81 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc-CCCC
Confidence 4688999999999998866 899997554322100001 11112234566666555443 3458
Q ss_pred ceEEEEcCCCceEEEecCCCCc---hHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Q 048614 100 PEVYHFDRTMSLIGMRYLEPPH---IILRKGLIAGIKYPLLAEHMSEFMAKTLF 150 (165)
Q Consensus 100 P~v~~~D~~~~~~vMEdL~~~~---~~lr~~l~~g~~~~~~a~~iG~~La~~h~ 150 (165)
|+++.++ ...++||+++.+. ..+...... ...-.++.++...+..+|.
T Consensus 82 ~~~~~~~--~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~ 132 (187)
T cd05119 82 PKPIDLN--RHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYR 132 (187)
T ss_pred CceEecC--CCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhh
Confidence 8888664 5799999998311 344443322 2234688888999999997
No 51
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=97.23 E-value=0.00084 Score=53.71 Aligned_cols=66 Identities=14% Similarity=0.058 Sum_probs=45.6
Q ss_pred HHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCC---chHHHHHHHcCCCCHHHHHHHHHHHHHH-Hhc
Q 048614 83 FEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP---HIILRKGLIAGIKYPLLAEHMSEFMAKT-LFY 151 (165)
Q Consensus 83 ~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~---~~~lr~~l~~g~~~~~~a~~iG~~La~~-h~~ 151 (165)
.|++.|+.+.+. ...||++|.+ ..+++||||++++ ...|++..........+..+++..|+++ |..
T Consensus 75 kE~r~L~rl~~~-Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~ 144 (197)
T cd05146 75 KEMHNLKRMQKA-GIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC 144 (197)
T ss_pred HHHHHHHHHHHc-CCCCCeEEEe--cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 577788888776 5679999966 7999999999842 2345543322111235678888888888 544
No 52
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.11 E-value=0.012 Score=46.73 Aligned_cols=105 Identities=20% Similarity=0.124 Sum_probs=72.6
Q ss_pred eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM 114 (165)
-++.+|.|....||++.+.++ .+++|.-.+.. .+.++...|..+|+.+.. |..++-.-.+......++|
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~lv~ 79 (260)
T cd05070 10 LIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT--------MSPESFLEEAQIMKKLRH--DKLVQLYAVVSEEPIYIVT 79 (260)
T ss_pred hhheeccccCceEEEEEecCCceeEEEEecCCC--------CCHHHHHHHHHHHHhcCC--CceEEEEeEECCCCcEEEE
Confidence 356788898889999988766 78888765421 123567788888887753 5544444445667788999
Q ss_pred ecCCCCchHHHHHHHcCC---C----CHHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGI---K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~---~----~~~~a~~iG~~La~~h~~t 152 (165)
|+++ ...|.+.+.+.. . .-.++.++...|+.+|...
T Consensus 80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 122 (260)
T cd05070 80 EYMS--KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 122 (260)
T ss_pred EecC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9997 346777665422 1 1356778888888888764
No 53
>PRK06149 hypothetical protein; Provisional
Probab=97.09 E-value=0.011 Score=57.45 Aligned_cols=128 Identities=17% Similarity=0.152 Sum_probs=85.8
Q ss_pred ccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHH
Q 048614 8 PLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALA 87 (165)
Q Consensus 8 ~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~ 87 (165)
.+|.+++...|.++--+ . -++.+++ |.-|.+|+|++.++++|+|...|.. +......|..+
T Consensus 16 ~ls~~~~~~ll~~~ygl------~---~~~~~L~-s~~d~nf~v~t~~~~yVLKi~~~~~---------~~~~l~~e~~~ 76 (972)
T PRK06149 16 DVSEAQAERILAEHYGL------S---GTLTELG-SQQDRNFRVDSDGGRFVLKICHAAY---------AAVELEAQHAA 76 (972)
T ss_pred CCCHHHHHHHHHHhcCC------c---eEEEecC-CcCcceEEEEecCCcEEEEeCCccC---------ChHHHHHHHHH
Confidence 47889999999765211 1 2467774 5558889999887799999988622 22467888889
Q ss_pred HHHhhccCCC-CCceEEEEc----------C--CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 048614 88 LKEHGQLCPD-HVPEVYHFD----------R--TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 88 L~~~~~~~p~-~vP~v~~~D----------~--~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd 154 (165)
|+.+.+-.|+ .||+++--- . ...+-+++|++ +..+.+ .....+..+.++|+++|++|..+.+
T Consensus 77 l~hL~~~~~glpvp~pi~t~~G~~~~~~~~~g~~~~vrL~~~l~--G~~~~~---~~~~~~~~~~~lG~~lArlh~al~~ 151 (972)
T PRK06149 77 LRHLAEREPALRVPVVIPALDGEELLTLDVRGQGLRVRLLDYLP--GQPLTR---LGHLAPASVAGLGALCARVARALAD 151 (972)
T ss_pred HHHHHhhCCCCCCceeeECCCCCeEEEEecCCceEEEEEEEecC--Cccccc---cCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 9888765322 344443211 1 22467889997 333321 1234578899999999999999999
Q ss_pred cccCc
Q 048614 155 LYRTT 159 (165)
Q Consensus 155 ~~l~~ 159 (165)
|.-+.
T Consensus 152 f~hp~ 156 (972)
T PRK06149 152 FDHPG 156 (972)
T ss_pred CCCCC
Confidence 97443
No 54
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.04 E-value=0.018 Score=46.02 Aligned_cols=105 Identities=18% Similarity=0.065 Sum_probs=72.0
Q ss_pred eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM 114 (165)
-.+.+|.|....||++.+.++ .++||.....- ...++...|.++|+.+.. |..++-.-.+..+...++|
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~--------~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~lv~ 79 (262)
T cd05071 10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAFLQEAQVMKKLRH--EKLVQLYAVVSEEPIYIVT 79 (262)
T ss_pred EeeecCCCCCCcEEEEEecCCceEEEEecccCc--------cCHHHHHHHHHHHHhCCC--CCcceEEEEECCCCcEEEE
Confidence 445688888889999987655 78888765311 234677888888888753 5544444446667788999
Q ss_pred ecCCCCchHHHHHHHcC--CC-----CHHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAG--IK-----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g--~~-----~~~~a~~iG~~La~~h~~t 152 (165)
|+++ ...|++.+.+. .. ...++.++...|+.+|...
T Consensus 80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 122 (262)
T cd05071 80 EYMS--KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 122 (262)
T ss_pred EcCC--CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34677777542 21 1356778888899998754
No 55
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=96.94 E-value=0.011 Score=46.08 Aligned_cols=110 Identities=18% Similarity=0.136 Sum_probs=70.4
Q ss_pred eEecCCCceeEEEEEEeCCC-eEEEeecCcccccc--------------CCCC-CCChHHHHHHHHHHHHhhccCCCCCc
Q 048614 37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCI--------------GESW-PMTKERAYFEALALKEHGQLCPDHVP 100 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~--------------~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP 100 (165)
.+.++.|....||++...+| .++||...+-.... -.+| .....+...|..++..+... ...+|
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~v~ 98 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE-GFPVP 98 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc-CCCCC
Confidence 46799999999999988767 89999743211000 0111 11222356677777776553 12577
Q ss_pred eEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 101 ~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
.++. .....++||+++ +..|.... .......++.++...+..+|...
T Consensus 99 ~~~~--~~~~~lv~e~~~--g~~L~~~~-~~~~~~~~~~~i~~~l~~lh~~g 145 (198)
T cd05144 99 KPID--WNRHAVVMEYID--GVELYRVR-VLEDPEEVLDEILEEIVKAYKHG 145 (198)
T ss_pred ceee--cCCceEEEEEeC--Ccchhhcc-ccccHHHHHHHHHHHHHHHHHCC
Confidence 7774 456799999998 34554432 21234578899999999998753
No 56
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=96.91 E-value=0.022 Score=45.04 Aligned_cols=104 Identities=13% Similarity=0.037 Sum_probs=69.7
Q ss_pred eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EE-cCCCceEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HF-DRTMSLIG 113 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~-D~~~~~~v 113 (165)
-.+.+|.|....||++...+..+++|..... ....+...|+..|+.+.. |..++-.- .+ +.....++
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~---------~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 10 LLQTIGKGEFGDVMLGDYRGNKVAVKCIKND---------ATAQAFLAEASVMTQLRH--SNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred eeeeecccCCCeEEEEEEcCCcEEEEEeCCC---------chHHHHHHHHHHHHhCCC--CCeeeEEEEEEcCCCceEEE
Confidence 4577899988999999877558898975321 224567788888887643 44444331 22 33456799
Q ss_pred EecCCCCchHHHHHHHcCCC--C-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIK--Y-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~--~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|.+.+.+... . -.++.++...|+.+|...
T Consensus 79 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 122 (256)
T cd05082 79 TEYMA--KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN 122 (256)
T ss_pred EECCC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99997 3466676654321 1 256778899999999765
No 57
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=96.87 E-value=0.017 Score=47.98 Aligned_cols=108 Identities=15% Similarity=0.048 Sum_probs=72.2
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~ 112 (165)
++.+|.|....||++.+.+ + .++||.-..-... -.-..++...|.+.|+.... |..++.++. .+.+...+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~--~~~i~~~~~~~~~~~~~~l 78 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVII----QDDDVECTMVEKRVLALPGK--PPFLTQLHSCFQTMDRLYF 78 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhcCC--CCceeeeEEEEEcCCEEEE
Confidence 5778999999999998763 3 7899975532211 01234567778777765542 455666553 45677889
Q ss_pred EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||||++ ...|...+.....+ ..++.+|...|+-+|...
T Consensus 79 v~E~~~--~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 121 (324)
T cd05587 79 VMEYVN--GGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKG 121 (324)
T ss_pred EEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 34677766554332 235677888888888754
No 58
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=96.85 E-value=0.027 Score=41.63 Aligned_cols=101 Identities=18% Similarity=0.111 Sum_probs=72.6
Q ss_pred cCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEEEe
Q 048614 40 VGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT--MSLIGMR 115 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~--~~~~vME 115 (165)
+|.|..+-||++...+ | .++||...+... ....++...|.+.|+.+.. ..+|+++.+... ...++||
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~------~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~~~~~~~~~e 71 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDS------SSLLEELLREIEILKKLNH---PNIVKLYGVFEDENHLYLVME 71 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccc------hhHHHHHHHHHHHHHhcCC---CCeeeEeeeeecCCeEEEEEe
Confidence 5788889999999874 4 899998764332 1145678888888887765 466666655554 8899999
Q ss_pred cCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 048614 116 YLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~ 151 (165)
+++ ...|.+.+... ... -.++.++...|+.+|..
T Consensus 72 ~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 111 (215)
T cd00180 72 YCE--GGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN 111 (215)
T ss_pred cCC--CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 998 35777776654 222 25777888888888876
No 59
>PRK09188 serine/threonine protein kinase; Provisional
Probab=96.85 E-value=0.015 Score=50.60 Aligned_cols=106 Identities=14% Similarity=-0.000 Sum_probs=71.8
Q ss_pred eeEecCCCceeEEEEEEeC--CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~ 112 (165)
....+|.|..-.||++... ++ .+.||.-.+.... .......++...|+++|+.+.. |..+|.++.+ ....+
T Consensus 22 ~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~--~~~~~~~~~~~~E~~iL~~L~h--~~iv~~l~~~--~~~~L 95 (365)
T PRK09188 22 ETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPW--WSKPLARHLAAREIRALKTVRG--IGVVPQLLAT--GKDGL 95 (365)
T ss_pred EccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccc--cccHHHHHHHHHHHHHHHhccC--CCCCcEEEEc--CCcEE
Confidence 5667899999999999764 34 5577765422110 0012234667889999988864 5678888755 56899
Q ss_pred EEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ 151 (165)
||||++ +..|.. ........+..++...|+.+|..
T Consensus 96 VmE~~~--G~~L~~--~~~~~~~~~~~~i~~aL~~lH~~ 130 (365)
T PRK09188 96 VRGWTE--GVPLHL--ARPHGDPAWFRSAHRALRDLHRA 130 (365)
T ss_pred EEEccC--CCCHHH--hCccchHHHHHHHHHHHHHHHHC
Confidence 999997 345642 22112357888999999999975
No 60
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=96.83 E-value=0.0069 Score=53.71 Aligned_cols=116 Identities=22% Similarity=0.250 Sum_probs=74.0
Q ss_pred cceeEecCCCceeEEEEEEeCCC-eEEEeecCccccc-cCCC-----------------C-CCChH--------------
Q 048614 34 ALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRC-IGES-----------------W-PMTKE-------------- 79 (165)
Q Consensus 34 ~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~-~~~~-----------------~-~l~~~-------------- 79 (165)
..+-++++.|.+..|||.++.+| .|+||.-.|-++. ...| . .++..
T Consensus 119 ~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El 198 (437)
T TIGR01982 119 EFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL 198 (437)
T ss_pred hCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence 44568999999999999999888 8999999887521 0000 0 01111
Q ss_pred HHHHHHHHHHHhhccC---C-CCCceEEEEcCCCceEEEecCCCCchHHHHHHH---cCCCCHHHHHHHHH-HHHHHHhc
Q 048614 80 RAYFEALALKEHGQLC---P-DHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLI---AGIKYPLLAEHMSE-FMAKTLFY 151 (165)
Q Consensus 80 R~~~E~~~L~~~~~~~---p-~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~---~g~~~~~~a~~iG~-~La~~h~~ 151 (165)
....|++.+..+.+.. | -.+|++|.--....++||||++ +..+.+.+. .+.....++..+.. ++..+|..
T Consensus 199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~--G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWID--GIPLSDIAALDEAGLDRKALAENLARSFLNQVLRD 276 (437)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeEC--CcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Confidence 1345777777776543 2 3789999765677899999997 334433322 12223456766655 56666653
No 61
>PRK12274 serine/threonine protein kinase; Provisional
Probab=96.83 E-value=0.013 Score=47.77 Aligned_cols=104 Identities=15% Similarity=0.164 Sum_probs=69.1
Q ss_pred eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCC--CCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESW--PMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIG 113 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~--~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~v 113 (165)
.++.++-|....|+.+..++.+++.+ -+..+ +.| ++...|...|+++|+.+.. +..+|+++.+ ..+.++
T Consensus 6 ~~~~l~~~~f~~v~~~~~~~~k~~~~----~l~~~-~~~~~~~~~~l~~rE~~iL~~L~~--~~~vP~ll~~--~~~~lv 76 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRGGERKFVRR----DLSAA-PWWLRGVAWWLARREALALRQLDG--LPRTPRLLHW--DGRHLD 76 (218)
T ss_pred cceeecCCCcceEEEeecCCceeeec----ccccc-hhhhhhHHHHHHHHHHHHHHhcCC--CCCCCEEEEE--cCEEEE
Confidence 56677777778888887755465522 12111 222 2223467889999988765 3678999977 568999
Q ss_pred EecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
|||+. +..|.+.+..+ ...+..++...|..+|...
T Consensus 77 meyI~--G~~L~~~~~~~--~~~~~~qi~~~L~~lH~~G 111 (218)
T PRK12274 77 RSYLA--GAAMYQRPPRG--DLAYFRAARRLLQQLHRCG 111 (218)
T ss_pred Eeeec--CccHHhhhhhh--hHHHHHHHHHHHHHHHHCc
Confidence 99997 45665544332 2356788888999999754
No 62
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=96.83 E-value=0.02 Score=45.24 Aligned_cols=105 Identities=14% Similarity=-0.021 Sum_probs=73.9
Q ss_pred eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vM 114 (165)
-.+.+|.|....||++...++.++||+...... ...|...|...|+.+.. |..++-+ +.++.....++|
T Consensus 10 ~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~--------~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 10 LGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST--------AAQAFLAEASVMTTLRH--PNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred ceeeeecCCCceEEEEEecCcEEEEEEeccchh--------HHHHHHHHHHHHHhcCC--cceeeeEEEEcCCCCeEEEE
Confidence 456788898899999998755999998752211 45788889888887753 3333222 345678889999
Q ss_pred ecCCCCchHHHHHHHcCC---C----CHHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGI---K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~---~----~~~~a~~iG~~La~~h~~t 152 (165)
|+++ ...|.+.+.... . .-.++.++...|+.+|...
T Consensus 80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ 122 (256)
T cd05039 80 EYMA--KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN 122 (256)
T ss_pred EecC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9998 347777765543 1 1357788888888888765
No 63
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=96.82 E-value=0.024 Score=45.24 Aligned_cols=104 Identities=18% Similarity=0.016 Sum_probs=70.0
Q ss_pred ecCCCceeEEEEEEeC---CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGS---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM 114 (165)
++|.|....||++... .+ .++||...+... ....++...|+.+|+.+.. |..++-+-.+..+...+||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~ii~~~~~~~~~~~~lv~ 73 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE------KSVRDEMMREAEIMHQLDN--PYIVRMIGVCEAEALMLVM 73 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC------hHHHHHHHHHHHHHHhcCC--CCeEEEEEEEcCCCeEEEE
Confidence 4788999999987653 33 588887754321 2234677788888887643 5545444455667788999
Q ss_pred ecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
||++ ...|.+.+.... .. -.++.+|...|+.+|...
T Consensus 74 e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 115 (257)
T cd05115 74 EMAS--GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN 115 (257)
T ss_pred EeCC--CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 9997 346777765322 11 256788888899888764
No 64
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=96.77 E-value=0.018 Score=48.89 Aligned_cols=108 Identities=19% Similarity=0.137 Sum_probs=70.9
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~ 111 (165)
.++.+|.|....||++.+. +| .+.||.-...-. ...-...+...|.++|+.... | ++++++. .+.....
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~E~~il~~l~h--p-~iv~~~~~~~~~~~~~ 77 (377)
T cd05629 5 TVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM----FKKDQLAHVKAERDVLAESDS--P-WVVSLYYSFQDAQYLY 77 (377)
T ss_pred EeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH----HHhHHHHHHHHHHHHHHhCCC--C-CcceEEEEEEcCCeeE
Confidence 4678999999999999876 44 788997542111 011234566778888776532 3 4455543 3566788
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
+||||++ ...|.+.+.....++ .++.++...|..+|...
T Consensus 78 lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g 121 (377)
T cd05629 78 LIMEFLP--GGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLG 121 (377)
T ss_pred EEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 346777776655432 25667888888888753
No 65
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=96.75 E-value=0.033 Score=44.27 Aligned_cols=105 Identities=18% Similarity=0.078 Sum_probs=71.5
Q ss_pred eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM 114 (165)
-.+.+|.|....||++...++ .+++|.-.+. ....++...|.++|+.+.. |..++-...+......++|
T Consensus 10 ~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~--------~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~v~ 79 (260)
T cd05073 10 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--------SMSVEAFLAEANVMKTLQH--DKLVKLHAVVTKEPIYIIT 79 (260)
T ss_pred EEeEecCccceEEEEEEecCCccEEEEecCCC--------hhHHHHHHHHHHHHHhcCC--CCcceEEEEEcCCCeEEEE
Confidence 567899999999999987665 6777754321 1234677788888887753 5555544444447789999
Q ss_pred ecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ + ..|.+.+... ... -.++.+|...|+-+|...
T Consensus 80 e~~~-~-~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 122 (260)
T cd05073 80 EFMA-K-GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 122 (260)
T ss_pred EeCC-C-CcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9997 3 3676766542 211 246678999999998654
No 66
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=96.74 E-value=0.025 Score=46.89 Aligned_cols=110 Identities=11% Similarity=-0.007 Sum_probs=73.4
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~ 112 (165)
+..+|.|....||++.+. +| .++||......... .-..++...|.+.+.....+--..+.+++. .+.+...+
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA----RDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence 567899999999999875 34 79999865332111 123467778888887766553334444443 45677899
Q ss_pred EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
||||++ + ..|...+..+.... .++.+|...|+-+|...
T Consensus 80 v~E~~~-~-~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ 121 (324)
T cd05589 80 VMEYAA-G-GDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENK 121 (324)
T ss_pred EEcCCC-C-CcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 3 46666665544332 46778888888888654
No 67
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=96.71 E-value=0.024 Score=46.96 Aligned_cols=106 Identities=13% Similarity=0.044 Sum_probs=69.7
Q ss_pred ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM 114 (165)
.+|.|....||++.+.. + .++||......... .-..++...|.++|+..... | ++++++. .+.....+||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~il~~~~~h-p-~i~~~~~~~~~~~~~~lv~ 75 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ----DDDVDCTMTEKRILALAAKH-P-FLTALHCCFQTKDRLFFVM 75 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh----hhHHHHHHHHHHHHHhccCC-C-CccceeeEEEcCCeEEEEE
Confidence 47888889999998763 4 78999865432111 12345667788887655332 3 4444443 3667788999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ ...|...+.+.... ..++.+|...|..+|...
T Consensus 76 E~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 116 (321)
T cd05591 76 EYVN--GGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG 116 (321)
T ss_pred eCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34676766655433 246778888899999753
No 68
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=96.65 E-value=0.033 Score=47.20 Aligned_cols=108 Identities=16% Similarity=0.091 Sum_probs=71.0
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.++.||.|....||++.+.. + .++||.-...--.. .-...+...|.++|+.+.. | ++++++ +.+.+...
T Consensus 5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~h--~-~iv~~~~~~~~~~~~~ 77 (376)
T cd05598 5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLM----RNQAAHVKAERDILAEADN--E-WVVKLYYSFQDKDNLY 77 (376)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHh----hhhHHHHHHHHHHHHhCCC--C-CcceEEEEEEcCCEEE
Confidence 47889999999999998763 4 78888754221100 1123566778888877643 3 334444 33567778
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
+||||++ ...|.+.+.+....+ .++.+|...|+.+|...
T Consensus 78 lv~E~~~--~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 121 (376)
T cd05598 78 FVMDYIP--GGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMG 121 (376)
T ss_pred EEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999997 357777776654332 24667888888888644
No 69
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=96.65 E-value=0.059 Score=42.59 Aligned_cols=105 Identities=18% Similarity=0.073 Sum_probs=69.2
Q ss_pred eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFDRTMSLIG 113 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~~~~~v 113 (165)
-.+.+|.|....||++...++ .+++|..... ..+.+....|.++|+.+.. |..++-.. +.+.+...++
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~--------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~iv 77 (256)
T cd05114 8 FMKELGSGQFGVVHLGKWRAQIKVAIKAINEG--------AMSEEDFIEEAKVMMKLSH--PKLVQLYGVCTQQKPLYIV 77 (256)
T ss_pred EeeEecCCcCceEEEEEeccCceEEEEecccC--------CccHHHHHHHHHHHHHCCC--CCceeEEEEEccCCCEEEE
Confidence 356799999999999988766 7888864311 2334567788888887753 55444332 3344566799
Q ss_pred EecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
|||++ ...|.+.+... ... -.++.++...|+.+|...
T Consensus 78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 120 (256)
T cd05114 78 TEFME--NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS 120 (256)
T ss_pred EEcCC--CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99997 33566666532 222 246777888888888654
No 70
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=96.64 E-value=0.028 Score=46.63 Aligned_cols=108 Identities=14% Similarity=0.051 Sum_probs=70.2
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~ 112 (165)
+..+|.|....||++.+.. + .++||.-..-... ..-...+...|.++++.... +..++.++. .+.+...+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~--~~~i~~~~~~~~~~~~~~l 78 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI----QDDDVECTMVEKRVLALSGK--PPFLTQLHSCFQTMDRLYF 78 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccC--CCeEeeEEEEEecCCEEEE
Confidence 5678999999999998763 4 7888876532211 11234556667777665432 445555544 35566779
Q ss_pred EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||||++ + ..|...+.....+ -.++.+|...|+-+|...
T Consensus 79 v~E~~~-~-g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 121 (323)
T cd05616 79 VMEYVN-G-GDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG 121 (323)
T ss_pred EEcCCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 3 4666666554332 247788899999999653
No 71
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=96.62 E-value=0.032 Score=46.38 Aligned_cols=109 Identities=15% Similarity=0.042 Sum_probs=70.8
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
-++.+|.|....||++.+.. | .++||.-...... ..-...+...|.++|+... .|..++-. ++.+.+...+
T Consensus 5 ~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~--h~~iv~~~~~~~~~~~~~l 78 (333)
T cd05600 5 ILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF----KLNEVRHVLTERDILTTTK--SEWLVKLLYAFQDDEYLYL 78 (333)
T ss_pred EEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhHHHHHHHHHHHHHhCC--CCCCccEEEEEEcCCEEEE
Confidence 46789999999999998863 4 7889976532210 0112345667888877664 24444333 2335566789
Q ss_pred EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
||||++ +..|.+.+...... . .++.+|...|+.+|...
T Consensus 79 v~e~~~--g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 121 (333)
T cd05600 79 AMEYVP--GGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELG 121 (333)
T ss_pred EEeCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 45777777654432 2 35678888888888643
No 72
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=96.59 E-value=0.031 Score=47.00 Aligned_cols=108 Identities=19% Similarity=0.166 Sum_probs=71.6
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
-++.||.|....||++.+. +| .++||.-..-- .. . .-...+...|.++|+.... |. +++++ +.+.....
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~-~--~~~~~~~~~E~~il~~l~h--~~-iv~~~~~~~~~~~~~ 77 (364)
T cd05599 5 SIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSE-ML-E--KEQVAHVRAERDILAEADN--PW-VVKLYYSFQDENYLY 77 (364)
T ss_pred EEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHH-hh-h--hhHHHHHHHHHHHHHhCCC--CC-CcceEEEEEcCCeEE
Confidence 3678999999999999886 34 78889764211 00 0 1123456678888887752 33 33443 34677788
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
+||||++ ...|.+.+..+..++ .++.+|...|.-+|...
T Consensus 78 lv~E~~~--~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ 121 (364)
T cd05599 78 LIMEYLP--GGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLG 121 (364)
T ss_pred EEECCCC--CcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999997 347777777655432 35667888888888653
No 73
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=96.58 E-value=0.029 Score=46.68 Aligned_cols=108 Identities=15% Similarity=0.044 Sum_probs=70.9
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~ 112 (165)
...+|.|....||++.+. +| .++||.-...... ..-...+...|.++++.... +..++.++. .+.+...+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~--~~~i~~~~~~~~~~~~~~l 78 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI----QDDDVECTMVEKRVLALQDK--PPFLTQLHSCFQTVDRLYF 78 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccC--CCchhheeeEEecCCEEEE
Confidence 467899999999999876 44 7889975422111 11234567778777765532 445665543 35566789
Q ss_pred EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||||++ ...|...+...... ..++.+|...|+-+|...
T Consensus 79 v~Ey~~--~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ 121 (323)
T cd05615 79 VMEYVN--GGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG 121 (323)
T ss_pred EEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 34666666553322 246778888899999754
No 74
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=96.56 E-value=0.039 Score=44.73 Aligned_cols=106 Identities=19% Similarity=0.180 Sum_probs=70.4
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~ 112 (165)
.+.+|.|....||++.+.. + .+++|+-.... ... .-..++...|++.|+.+. .|. +++++. .+.....+
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~---~~~~~~~~~e~~~l~~l~--h~~-i~~~~~~~~~~~~~~~ 78 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAK-IVK---LKQVEHVLNEKRILQSIR--HPF-LVNLYGSFQDDSNLYL 78 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHH-hhh---hhHHHHHHHHHHHHHhCC--CCC-ccceeeEEEcCCeEEE
Confidence 5678889999999998763 4 78888754211 000 122467778888888776 344 444443 46667789
Q ss_pred EEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~ 151 (165)
|||+++ ...|.+.+......+ .++.+|...|..+|..
T Consensus 79 v~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~ 120 (290)
T cd05580 79 VMEYVP--GGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL 120 (290)
T ss_pred EEecCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 999997 246777775554322 3567888888888864
No 75
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=96.56 E-value=0.084 Score=42.52 Aligned_cols=108 Identities=12% Similarity=0.022 Sum_probs=69.5
Q ss_pred eEecCCCceeEEEEEEeC--CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------c
Q 048614 37 IKEVGDGNLNFVYIVVGS--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-------D 106 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------D 106 (165)
++.+|.|....||++.+. +| .++||........ .+ ...+...|.+.|+.+..+.-.++++++.+ +
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~--~~---~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EG---MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC--CC---chHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 567899999999999873 34 6888865433221 11 12345568888887766543455666543 2
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
.....+|||+++. .+.+.+.... .. -.++.+|...|+.+|...
T Consensus 81 ~~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ 130 (290)
T cd07862 81 ETKLTLVFEHVDQ---DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR 130 (290)
T ss_pred CCcEEEEEccCCC---CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3456899999972 4555554321 11 357888899999999654
No 76
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=96.56 E-value=0.06 Score=42.60 Aligned_cols=105 Identities=19% Similarity=0.092 Sum_probs=71.0
Q ss_pred eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
-++.+|.|..+.||++...++ .+++|+-.+- ....++...|..+|+.+.. |..++-. +..+.+...++
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~--------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 10 LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG--------TMSVQAFLEEANLMKTLQH--DKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred EeeecCCcCCceEEEEEecCCceEEEEEccCC--------chhHHHHHHHHHHHHhCCC--CCeeeEEEEEcCCCCcEEE
Confidence 468899999999999987766 7888874321 1235677888888887642 4433332 34566777899
Q ss_pred EecCCCCchHHHHHHHc--CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIA--GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~--g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ..+|++.+.. +... -.++.++...|+.+|...
T Consensus 80 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~ 123 (261)
T cd05072 80 TEYMA--KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 123 (261)
T ss_pred EecCC--CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99997 3467666643 2221 246678888899898654
No 77
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=96.55 E-value=0.053 Score=43.93 Aligned_cols=107 Identities=11% Similarity=-0.063 Sum_probs=64.4
Q ss_pred cCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEEe
Q 048614 40 VGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIGMR 115 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~vME 115 (165)
+|.|....||++.+. +| .+.||...+.... ..-...+...|...++......-..++.++.+ +.+...+|||
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 77 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK----MKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILD 77 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccc----cchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEe
Confidence 678888999999886 34 7888866532210 01112233444455555543322334554433 4567789999
Q ss_pred cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|++ ...|...+...... -.++.++...|+.+|...
T Consensus 78 ~~~--~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ 117 (279)
T cd05633 78 LMN--GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRF 117 (279)
T ss_pred cCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 998 34676666554322 246788888899999654
No 78
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.54 E-value=0.049 Score=43.98 Aligned_cols=110 Identities=18% Similarity=0.155 Sum_probs=68.9
Q ss_pred eEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC-c
Q 048614 37 IKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM-S 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~-~ 110 (165)
.+.+|.|....||++.+. +| .+++|.-..-.. .......++...|..+|+.+... |..++-...|..+. .
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~---~~~~~~~~~~~~e~~~l~~l~~~-~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATI---VQKAKTTEHTRTERQVLEHIRQS-PFLVTLHYAFQTDTKL 80 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhh---hhcchHHHHHHHHHHHHHhcccC-CChhceeeEeecCCeE
Confidence 467899999999999873 45 788887432110 11233446777888888776542 44444333443333 4
Q ss_pred eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.+|||+++ ...|.+.+...... ..++.+|...|+.+|...
T Consensus 81 ~lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ 125 (290)
T cd05613 81 HLILDYIN--GGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG 125 (290)
T ss_pred EEEEecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 59999997 34677777654432 234457888888888754
No 79
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=96.54 E-value=0.032 Score=44.29 Aligned_cols=110 Identities=15% Similarity=0.006 Sum_probs=69.3
Q ss_pred eEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~v 113 (165)
.+.+|.|....||++.+.+| .++||+........ ..-.-...+...|.+.|+.+.. | .+++++. .+.....++
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~-~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNV-LAAEKEYEKLQEEVDLLKSLKH--V-NIVQYLGTCLDDNTISIF 80 (265)
T ss_pred cceEeccCCeEEEEEEEcCCCeEEEEEeecCccch-hhHHHHHHHHHHHHHHHHhcCC--C-CEeeEeeEeecCCeEEEE
Confidence 45678899999999988766 78999755321100 0000012345567777776653 3 3334443 366778999
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|++.+.+.... ..++.++...|+.+|...
T Consensus 81 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (265)
T cd06631 81 MEFVP--GGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC 122 (265)
T ss_pred EecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99997 35777777663322 245678888888888654
No 80
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=96.50 E-value=0.046 Score=45.39 Aligned_cols=106 Identities=17% Similarity=0.091 Sum_probs=68.5
Q ss_pred ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM 114 (165)
.+|.|....||++.+.+ + .++||......... .-...+...|.++|+..... |. +++++. .+.+...+||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~h-p~-iv~~~~~~~~~~~~~lv~ 75 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM----DDDVECTMVEKRVLSLAWEH-PF-LTHLYCTFQTKENLFFVM 75 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----cchHHHHHHHHHHHHhccCC-Cc-CcceEEEEEeCCEEEEEE
Confidence 57888888999998764 4 79999876543211 12235667787777654222 33 333333 3556677999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ ...|...+...... ..++.+|...|+.+|...
T Consensus 76 ey~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ 116 (316)
T cd05619 76 EYLN--GGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKG 116 (316)
T ss_pred eCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9997 34677777654322 246778888888888764
No 81
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.48 E-value=0.039 Score=45.78 Aligned_cols=110 Identities=14% Similarity=0.083 Sum_probs=70.1
Q ss_pred eeEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614 36 TIKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~ 108 (165)
-++.+|.|....||+|... .| .+.+|....... .+.....++...|..+|+.+... | .++.++. .+..
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~~~e~~~l~~l~~~-~-~i~~~~~~~~~~~ 78 (332)
T cd05614 4 LLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAAL---VQKAKTVEHTRTERNVLEHVRQS-P-FLVTLHYAFQTEA 78 (332)
T ss_pred EEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHH---hhhhhHHHHHHHHHHHHHhccCC-C-CcccEEEEEecCC
Confidence 3577899999999999863 34 677887542211 11123456778888888776532 3 3344433 3445
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
...+||||++ + ..|.+.+..+... -.++.+|...|+-+|...
T Consensus 79 ~~~lv~e~~~-~-g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 125 (332)
T cd05614 79 KLHLILDYVS-G-GEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG 125 (332)
T ss_pred EEEEEEeCCC-C-CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5679999998 3 4566666554433 235668888899998653
No 82
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=96.48 E-value=0.04 Score=46.01 Aligned_cols=106 Identities=15% Similarity=0.049 Sum_probs=68.1
Q ss_pred ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEe
Q 048614 39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMR 115 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vME 115 (165)
.+|.|....||++.+. +| .++||......... .-...+...|..+|+.... |..++-. .+.+.+...+|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~iv~~~~~~~~~~~~~lv~E 75 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA----KDEVAHTLTESRVLKNTRH--PFLTSLKYSFQTKDRLCFVME 75 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhCCC--CCCcceEEEEEcCCEEEEEEe
Confidence 5788999999999876 44 79999865432111 1223566677777766533 4443332 3345667789999
Q ss_pred cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|++ + ..|...+...... ..++.+|...|+-+|...
T Consensus 76 y~~-~-g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ 115 (328)
T cd05593 76 YVN-G-GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGK 115 (328)
T ss_pred CCC-C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 997 3 3565666554332 246778888899998754
No 83
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=96.48 E-value=0.035 Score=46.21 Aligned_cols=106 Identities=13% Similarity=0.029 Sum_probs=68.5
Q ss_pred ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEe
Q 048614 39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMR 115 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vME 115 (165)
.+|.|....||++.+. +| .+++|+-....... .-...+...|.++|+.... |..++-. .+.+.+...+|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~i~~~~~~~~~~~~~~lv~E 75 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA----KDEVAHTVTESRVLQNTRH--PFLTALKYAFQTHDRLCFVME 75 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hHHHHHHHHHHHHHHhCCC--CCCcceeeEEecCCEEEEEEe
Confidence 5788889999999875 44 79999876433211 1223455667777776543 4333332 2345567789999
Q ss_pred cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|++ ...|...+...... -.++.+|...|+-+|...
T Consensus 76 ~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 115 (323)
T cd05595 76 YAN--GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 115 (323)
T ss_pred CCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 998 34666666555432 246678888888888753
No 84
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=96.44 E-value=0.073 Score=42.71 Aligned_cols=108 Identities=16% Similarity=0.147 Sum_probs=68.6
Q ss_pred CCcc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---
Q 048614 32 FDAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--- 105 (165)
Q Consensus 32 ~~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--- 105 (165)
.+++ -++.+|.|..+.||++.+.. + .+++|.-.+... ..++...|...++.+... | .+++++.+
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--------~~~~~~~e~~~l~~l~~h-~-~i~~~~~~~~~ 86 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD--------IDEEIEAEYNILKALSDH-P-NVVKFYGMYYK 86 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc--------hHHHHHHHHHHHHHHhcC-C-Ceeeeeeeeee
Confidence 3455 55789999999999998763 4 788886432211 124566787777776432 3 44555543
Q ss_pred ----cCCCceEEEecCCCCchHHHHHHH----cCCCCH-----HHHHHHHHHHHHHHhc
Q 048614 106 ----DRTMSLIGMRYLEPPHIILRKGLI----AGIKYP-----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 106 ----D~~~~~~vMEdL~~~~~~lr~~l~----~g~~~~-----~~a~~iG~~La~~h~~ 151 (165)
+.+...++|||++ ..+|.+.+. .+...+ .++.++...|.-+|..
T Consensus 87 ~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 143 (286)
T cd06638 87 KDVKNGDQLWLVLELCN--GGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN 143 (286)
T ss_pred cccCCCCeEEEEEeecC--CCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC
Confidence 3356799999997 345555443 222222 3777888888888864
No 85
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=96.43 E-value=0.038 Score=45.93 Aligned_cols=109 Identities=16% Similarity=0.046 Sum_probs=69.0
Q ss_pred eEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCc
Q 048614 37 IKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~ 110 (165)
++.+|.|....||++... .+ .++||.-..-.-. .......+...|.++|+.+.. |..++-. .+.+....
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~~~E~~il~~l~h--p~iv~~~~~~~~~~~~ 75 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV---RNQKDTAHTKAERNILEAVKH--PFIVDLIYAFQTGGKL 75 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH---hhhhhHHHHHHHHHHHHhCCC--CchhceeeEEecCCeE
Confidence 357889999999999863 23 6888875421100 111233566778888887753 5444433 23345567
Q ss_pred eEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 111 LIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
.+||||++ ...|.+.+......+ .++.+|...|..+|...
T Consensus 76 ~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (323)
T cd05584 76 YLILEYLS--GGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG 120 (323)
T ss_pred EEEEeCCC--CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 89999997 346777776554332 35667888888888754
No 86
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=96.43 E-value=0.071 Score=42.07 Aligned_cols=103 Identities=13% Similarity=-0.060 Sum_probs=70.1
Q ss_pred eEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 048614 37 IKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRY 116 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEd 116 (165)
.+.+|.|....||++...+..+++|.-... ...++...|..+|+.+.. |..++-.-.+..+...++|||
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~---------~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~v~e~ 79 (254)
T cd05083 11 GEIIGEGEFGAVLQGEYTGQKVAVKNIKCD---------VTAQAFLEETAVMTKLHH--KNLVRLLGVILHNGLYIVMEL 79 (254)
T ss_pred eeeeccCCCCceEecccCCCceEEEeecCc---------chHHHHHHHHHHHHhCCC--CCcCeEEEEEcCCCcEEEEEC
Confidence 467888888899998765558999975321 233567778888876653 555555444555667899999
Q ss_pred CCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614 117 LEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 L~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
++ ...|.+.+.... .. -.++.++...|+.+|...
T Consensus 80 ~~--~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 120 (254)
T cd05083 80 MS--KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK 120 (254)
T ss_pred CC--CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 97 346666665422 11 236778899999999654
No 87
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=96.42 E-value=0.05 Score=42.85 Aligned_cols=104 Identities=17% Similarity=0.091 Sum_probs=67.3
Q ss_pred EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEE
Q 048614 38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~v 113 (165)
+.+|.|....||++.+. +| .+++|....... .-...+...|.++|+.+.. |.. ++++ ..+.....+|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~i-~~~~~~~~~~~~~~lv 71 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP------PDLKAKFLQEARILKQYSH--PNI-VRLIGVCTQKQPIYIV 71 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCC------HHHHHHHHHHHHHHHhCCC--CCc-ceEEEEEcCCCCeEEE
Confidence 35788888999999875 44 788886542221 1123567778888877642 443 3343 3466667899
Q ss_pred EecCCCCchHHHHHHHc-CC-CC----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIA-GI-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~-g~-~~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|.+.+.. +. .. -.++.++...|+-+|...
T Consensus 72 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 114 (252)
T cd05084 72 MELVQ--GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH 114 (252)
T ss_pred Eeecc--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99997 3477776644 32 22 246778888888888654
No 88
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=96.41 E-value=0.043 Score=45.58 Aligned_cols=106 Identities=13% Similarity=0.039 Sum_probs=68.0
Q ss_pred ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEe
Q 048614 39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMR 115 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vME 115 (165)
.+|.|....||++.+. +| .++||.-..-.-.. .-...+...|.++|+.... |..+.-. ++.+.+...+|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h--p~i~~~~~~~~~~~~~~lv~e 75 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA----KDEVAHTLTESRVLQNTRH--PFLTALKYSFQTHDRLCFVME 75 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hHHHHHHHHHHHHHHhCCC--CCCCCEEEEEEcCCEEEEEEe
Confidence 5788999999999875 44 78999765322110 1223466678777766542 4433333 3345566779999
Q ss_pred cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|++ + ..|...+...... ..++.+|...|+-+|...
T Consensus 76 ~~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 115 (323)
T cd05571 76 YAN-G-GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCD 115 (323)
T ss_pred CCC-C-CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 998 3 4666666654433 235678888899898764
No 89
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.41 E-value=0.14 Score=41.84 Aligned_cols=111 Identities=16% Similarity=0.138 Sum_probs=73.5
Q ss_pred CCCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEc
Q 048614 31 KFDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFD 106 (165)
Q Consensus 31 ~~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D 106 (165)
....+ .++.+|.|..+.||++.+. ++ .+.+|.-.. .. .-..++...|.++|+.... |..++-. ++.+
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~------~~-~~~~~~~~~e~~~l~~~~h--~~v~~~~~~~~~ 88 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL------QQ-QPKKELIINEILVMRENKN--PNIVNYLDSYLV 88 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEec------CC-cchHHHHHHHHHHHHhCCC--CCEeeEEEEEEe
Confidence 34455 5667999999999999865 34 788886431 11 1234677788888876533 4444433 3456
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
.....+||||++ ...|.+.+..+... ..++.++...|+.+|...
T Consensus 89 ~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~g 136 (296)
T cd06654 89 GDELWVVMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136 (296)
T ss_pred CCEEEEeecccC--CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 778899999997 34666666544322 356678888999998765
No 90
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=96.41 E-value=0.056 Score=45.08 Aligned_cols=108 Identities=14% Similarity=0.062 Sum_probs=71.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
-.+.+|.|....||++... +| .++||.....--.. .-..++...|..+|+.+.. |. +.+++ +.+.+...
T Consensus 22 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~~~ 94 (329)
T PTZ00263 22 MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILK----MKQVQHVAQEKSILMELSH--PF-IVNMMCSFQDENRVY 94 (329)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhhHHHHHHHHHHHHhCCC--CC-CCcEEEEEEcCCEEE
Confidence 4678999999999999876 34 79999865321100 1123567778888877642 33 33333 45777889
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
++|||+. + ..|.+.+.+....+ .++.+|...|+-+|...
T Consensus 95 lv~e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 138 (329)
T PTZ00263 95 FLLEFVV-G-GELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKD 138 (329)
T ss_pred EEEcCCC-C-ChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999997 3 46767776654332 34567888888888754
No 91
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=96.40 E-value=0.092 Score=41.91 Aligned_cols=108 Identities=17% Similarity=0.090 Sum_probs=71.1
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~ 112 (165)
++.+|.|....||++.+. +| .+++|.-..... .-...+...|...++.+.......+.+++. .+.....+
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP------DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhheeccCCceEEEEEEcCCCcEEEEEEecCCCC------chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 456888999999999875 44 788886432111 123456677888888876533233333333 45566789
Q ss_pred EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
+|||++ ...|.+.+..+... -.++.++...|+.+|...
T Consensus 80 v~e~~~--~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 121 (277)
T cd06917 80 IMEYAE--GGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVG 121 (277)
T ss_pred EEecCC--CCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 34777777666433 246778888888888754
No 92
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=96.39 E-value=0.09 Score=42.36 Aligned_cols=107 Identities=13% Similarity=0.082 Sum_probs=65.9
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC--
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTM-- 109 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~-- 109 (165)
....+|.|....||++.+. +| .++||....-... .-...+...|.++|+.+... |. +++++. .+.+.
T Consensus 5 ~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-----~~~~~~~~~E~~~l~~l~~~-~~-i~~~~~~~~~~~~~~ 77 (295)
T cd07837 5 KLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-----EGIPPTALREISLLQMLSES-IY-IVRLLDVEHVEEKNG 77 (295)
T ss_pred EeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-----cCCchHHHHHHHHHHHccCC-CC-ccceeeeEeecCCCC
Confidence 4567898999999999876 45 7999975432211 11224567788888877442 33 333332 22222
Q ss_pred ---ceEEEecCCCCchHHHHHHHcC-----CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 110 ---SLIGMRYLEPPHIILRKGLIAG-----IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ---~~~vMEdL~~~~~~lr~~l~~g-----~~~-----~~~a~~iG~~La~~h~~t 152 (165)
..++|||++ . .+++.+... ..+ -.++.+|...|+-+|...
T Consensus 78 ~~~~~lv~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 130 (295)
T cd07837 78 KPSLYLVFEYLD-S--DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG 130 (295)
T ss_pred CceEEEEeeccC-c--CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 479999998 2 455555431 111 246788888888888654
No 93
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=96.37 E-value=0.094 Score=41.67 Aligned_cols=104 Identities=17% Similarity=0.102 Sum_probs=70.5
Q ss_pred eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~ 112 (165)
-.+.+|.|....||.+...++ .+.||+.... ..+.++...|...|+.+.. | .+++++.+ +.+...+
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~--------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~l 76 (256)
T cd05113 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG--------SMSEDEFIEEAKVMMKLSH--E-KLVQLYGVCTKQRPIYI 76 (256)
T ss_pred EeeEecCcccceEEEEEecCCCcEEEEEcCCC--------cccHHHHHHHHHHHhcCCC--C-CeeeEEEEEccCCCcEE
Confidence 457789999899999987655 6888985421 1234567778888876642 4 44455543 3445689
Q ss_pred EEecCCCCchHHHHHHHcCC-C-C----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGI-K-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~-~-~----~~~a~~iG~~La~~h~~t 152 (165)
+|||++ ...|++.+.... . . -.++.+|...|+.+|...
T Consensus 77 v~e~~~--~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 120 (256)
T cd05113 77 VTEYMS--NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ 120 (256)
T ss_pred EEEcCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 346777776532 1 1 257888999999998654
No 94
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=96.37 E-value=0.055 Score=45.62 Aligned_cols=108 Identities=14% Similarity=0.048 Sum_probs=70.2
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.++.+|.|....||++... .| .++||.-....... .-...+...|..+|..+.. |. +++++ +.+.+...
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~~--~~-iv~~~~~~~~~~~~~ 77 (360)
T cd05627 5 SLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLE----KEQVAHIRAERDILVEADG--AW-VVKMFYSFQDKRNLY 77 (360)
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhh----hhhHHHHHHHHHHHHhCCC--CC-EeeEEEEEEcCCEEE
Confidence 4678999999999999876 34 78888654221110 1234567778887766532 33 33333 33566779
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
+||||++ +..|.+.+.+....+ .++.+|...|..+|...
T Consensus 78 lv~E~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~g 121 (360)
T cd05627 78 LIMEFLP--GGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLG 121 (360)
T ss_pred EEEeCCC--CccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999997 347777776544332 35677888888888654
No 95
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=96.37 E-value=0.053 Score=42.38 Aligned_cols=105 Identities=17% Similarity=0.080 Sum_probs=69.6
Q ss_pred eEecCCCceeEEEEEEeCC-----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCC
Q 048614 37 IKEVGDGNLNFVYIVVGSS-----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRT 108 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~ 108 (165)
.+.+|.|....||++.... + .+++|...+... + -...+...|.+.|+.+.. |. +.+++ ..+..
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-----~-~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~ 74 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-----E-QQIEEFLREARIMRKLDH--PN-IVKLLGVCTEEE 74 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-----h-HHHHHHHHHHHHHHhcCC--Cc-hheEEEEEcCCC
Confidence 3578899999999998864 2 688898753321 1 134567778888877732 44 34444 34456
Q ss_pred CceEEEecCCCCchHHHHHHHcCCC---C----HHHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIK---Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~---~----~~~a~~iG~~La~~h~~t 152 (165)
...++||+++ + ..+.+.+..... . ..++.++...|+.+|...
T Consensus 75 ~~~~i~e~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~ 123 (258)
T smart00219 75 PLMIVMEYME-G-GDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN 123 (258)
T ss_pred eeEEEEeccC-C-CCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 8889999997 3 466666654332 1 357778888888888664
No 96
>PHA02988 hypothetical protein; Provisional
Probab=96.36 E-value=0.038 Score=45.07 Aligned_cols=107 Identities=14% Similarity=0.103 Sum_probs=72.5
Q ss_pred eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c----CCC
Q 048614 36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D----RTM 109 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D----~~~ 109 (165)
+...++.|....||+....+..++||.-...-.. -..-.++...|...|+.+.. | ++.+++.+ | ...
T Consensus 24 ~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--~-nIv~~~g~~~~~~~~~~~ 96 (283)
T PHA02988 24 TSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKG----HKVLIDITENEIKNLRRIDS--N-NILKIYGFIIDIVDDLPR 96 (283)
T ss_pred CCeEEeeCCceEEEEEEECCEEEEEEeccccccc----cHHHHHHHHHHHHHHHhcCC--C-CEEEEeeeEEecccCCCc
Confidence 4456788888899999986558999976532211 01113566788888887743 4 55666654 2 235
Q ss_pred ceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614 110 SLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
..++|||++ ...|++.+.+.... -.++.++...|+.+|..
T Consensus 97 ~~lv~Ey~~--~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 141 (283)
T PHA02988 97 LSLILEYCT--RGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY 141 (283)
T ss_pred eEEEEEeCC--CCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 679999998 45788877665432 35777889999999964
No 97
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=96.34 E-value=0.049 Score=45.24 Aligned_cols=106 Identities=14% Similarity=0.070 Sum_probs=67.9
Q ss_pred ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM 114 (165)
.+|.|....||++.+. ++ .+.||.-..-.-.. .-..++...|.+.|+..... |. +++++. .+.+...+||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~h-~~-iv~~~~~~~~~~~~~iv~ 75 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ----DDDVECTMTEKRILSLARNH-PF-LTQLYCCFQTPDRLFFVM 75 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----ccHHHHHHHHHHHHHhccCC-Cc-hhceeeEEEcCCEEEEEE
Confidence 5788889999999876 34 68888755322110 12345666777777655332 33 333433 3556678999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ ...|...+...... ..++.+|...|+-+|...
T Consensus 76 Ey~~--~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ 116 (320)
T cd05590 76 EFVN--GGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG 116 (320)
T ss_pred cCCC--CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9997 35777766654432 246678888899888754
No 98
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=96.34 E-value=0.039 Score=45.98 Aligned_cols=106 Identities=10% Similarity=0.015 Sum_probs=67.9
Q ss_pred ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~vM 114 (165)
.+|.|....||++.+.. + .+.||......... .-...+...|..+++..... | .++.++.+ +.....+||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~~~~~~~~-~-~i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD----DEDIDWVQTEKHVFEQASSN-P-FLVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhhcCC-C-CEeeEEEEEEeCCEEEEEE
Confidence 57889999999998764 3 68888876432110 11234566777777655332 3 34444432 556677999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ ...|...+...... ..++.+|...|+-+|...
T Consensus 76 e~~~--~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ 116 (327)
T cd05617 76 EYVN--GGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERG 116 (327)
T ss_pred eCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9997 34666666554332 247788889999999754
No 99
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=96.34 E-value=0.094 Score=41.54 Aligned_cols=105 Identities=24% Similarity=0.160 Sum_probs=69.9
Q ss_pred eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM 114 (165)
-++.+|.|....||++...++ .+++|.-... ....++...|...|+.+.. |..++-.-.+..+...++|
T Consensus 10 ~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~--------~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~v~ 79 (260)
T cd05067 10 LVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQG--------SMSPEAFLAEANLMKQLQH--PRLVRLYAVVTQEPIYIIT 79 (260)
T ss_pred eeeeeccCccceEEeeecCCCceEEEEEecCC--------CCcHHHHHHHHHHHHhcCC--cCeeeEEEEEccCCcEEEE
Confidence 367899999999999998776 8998864311 1334677788888887753 4333332233456789999
Q ss_pred ecCCCCchHHHHHHHc--CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIA--GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~--g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|++. ...|.+.+.. +... -.++.++...|..+|...
T Consensus 80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ 122 (260)
T cd05067 80 EYME--NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN 122 (260)
T ss_pred EcCC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 9997 3466666644 2221 245678888889888654
No 100
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=96.32 E-value=0.075 Score=44.26 Aligned_cols=105 Identities=20% Similarity=0.145 Sum_probs=71.6
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.+..+|.|....||++.+. .| .+++|.-..... +....+...|.+.|+.+.. |. +.+++ +.+.+...
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~ 79 (331)
T cd06649 9 RISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK------PAIRNQIIRELQVLHECNS--PY-IVGFYGAFYSDGEIS 79 (331)
T ss_pred EEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHHCCC--CC-CCeEEEEEEECCEEE
Confidence 5678999999999999887 34 677787653221 1123567788888877642 43 33344 34667789
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
+||||++ ...|.+.+...... ..++.++...|+-+|..
T Consensus 80 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 122 (331)
T cd06649 80 ICMEHMD--GGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 122 (331)
T ss_pred EEeecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 9999997 45777777654432 24667888888888853
No 101
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=96.32 E-value=0.077 Score=42.06 Aligned_cols=104 Identities=17% Similarity=0.131 Sum_probs=68.2
Q ss_pred eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~ 112 (165)
-.+.+|.|....||++.+.++ .++||.-.+.- ........|.+.|+.+.. |. +++++ ..+.....+
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~l 78 (261)
T cd05068 10 LLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT--------MDPKDFLAEAQIMKKLRH--PK-LIQLYAVCTLEEPIYI 78 (261)
T ss_pred eEEEecccCCccEEEEEecCCeEEEEEeeCCCc--------ccHHHHHHHHHHHHHCCC--CC-ccceeEEEecCCCeee
Confidence 357889888889999987655 78888754211 123445667777776642 43 33344 334455678
Q ss_pred EEecCCCCchHHHHHHHcCC--C-----CHHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGI--K-----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~--~-----~~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ..+|.+.+.... . ...++.++...|+.+|...
T Consensus 79 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 123 (261)
T cd05068 79 VTELMK--YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN 123 (261)
T ss_pred eeeccc--CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999996 357777765422 1 2367788888899988653
No 102
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=96.31 E-value=0.051 Score=43.64 Aligned_cols=106 Identities=18% Similarity=0.062 Sum_probs=68.5
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~ 111 (165)
.+..+|.|....||++.+. .+ .++||.-.. ..+.-...+...|..+|+... ...+++++.+ +.....
T Consensus 8 ~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~------~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~ 78 (277)
T cd06640 8 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDL------EEAEDEIEDIQQEITVLSQCD---SPYVTKYYGSYLKGTKLW 78 (277)
T ss_pred hhhhcccCCCeEEEEEEEccCCEEEEEEEEec------cccHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEECCEEE
Confidence 4567899999999999875 34 788886431 111122356666777776553 3344555443 556789
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
+|||+++ ...|++.+..+.... .++.++...|+.+|...
T Consensus 79 lv~e~~~--~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ 121 (277)
T cd06640 79 IIMEYLG--GGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEK 121 (277)
T ss_pred EEEecCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 356777776665432 45667777788887554
No 103
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=96.29 E-value=0.036 Score=46.06 Aligned_cols=107 Identities=17% Similarity=0.148 Sum_probs=70.4
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
-++.+|.|....||++.+. +| .++||.-....... .-...+...|.++|+.... |. +++++ +.|.+...
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~~-i~~~~~~~~~~~~~~ 77 (350)
T cd05573 5 VIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK----RNQIAHVRAERDILADADS--PW-IVKLYYSFQDEEHLY 77 (350)
T ss_pred EEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh----ccHHHHHHHHHHHHHhcCC--CC-ccchhhheecCCeEE
Confidence 3578899999999999987 34 78999765322110 1223456677777776652 33 33332 34667788
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
+||||++ ...|.+.+.+.... -.++.+|...|+.+|..
T Consensus 78 lv~e~~~--~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 120 (350)
T cd05573 78 LVMEYMP--GGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL 120 (350)
T ss_pred EEEcCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9999997 34677777665332 23667888899999974
No 104
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=96.29 E-value=0.081 Score=41.63 Aligned_cols=105 Identities=16% Similarity=0.115 Sum_probs=70.0
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~ 112 (165)
.+.+|.|....||++... ++ .+++|.-.. ..+.........|.++|+.... | .+++++ ..+.+...+
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~------~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~i 76 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDL------EKCQTSVDELRKEVQAMSQCNH--P-NVVKYYTSFVVGDELWL 76 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEecc------CCcchHHHHHHHHHHHHHhcCC--C-CEEEEEEEEeeCCEEEE
Confidence 567888999999999865 34 788886431 1222355677888888876643 3 333333 456788889
Q ss_pred EEecCCCCchHHHHHHHcCC----CC----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGI----KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~----~~----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ...+.+.+.+.. .. ..++.+|...|+-+|...
T Consensus 77 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~ 122 (267)
T cd06610 77 VMPYLS--GGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG 122 (267)
T ss_pred EEeccC--CCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 335666665421 12 246788889999998654
No 105
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=96.28 E-value=0.12 Score=40.79 Aligned_cols=103 Identities=20% Similarity=0.191 Sum_probs=69.7
Q ss_pred eEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~v 113 (165)
.+.+|.|....||++.+.++ .++||.-.+- ..+.++...|..+|+.+.. | .+++++.+ +.....++
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~--------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~~v 79 (261)
T cd05034 11 ERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG--------TMSPEAFLQEAQIMKKLRH--D-KLVQLYAVCSEEEPIYIV 79 (261)
T ss_pred eeeeccCcceEEEEEEEcCCceEEEEEecCC--------ccCHHHHHHHHHHHhhCCC--C-CEeeeeeeeecCCceEEE
Confidence 46788888899999987755 7888875421 1344677788888877652 3 44555443 33678899
Q ss_pred EecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ..+|.+.+.+.. .. ..++.++...|+.+|...
T Consensus 80 ~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~ 123 (261)
T cd05034 80 TEYMS--KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN 123 (261)
T ss_pred EeccC--CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99997 457777775532 11 356778888888888654
No 106
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=96.27 E-value=0.047 Score=45.24 Aligned_cols=106 Identities=12% Similarity=0.027 Sum_probs=68.6
Q ss_pred ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM 114 (165)
.+|.|....||++.+.. + .++||.-..-.-.. .-..++...|.++|+.... ..++++++. .+.+...+||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~il~~~~~--h~~i~~~~~~~~~~~~~~lv~ 75 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ----DDDVECTMTEKRVLALAGK--HPFLTQLHSCFQTKDRLFFVM 75 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhHHHHHHHHHHHHHhccC--CCCccceeeEEEcCCEEEEEE
Confidence 57888889999998763 4 78888754322111 1234566678788776542 234555554 4677789999
Q ss_pred ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
||++ +..|...+.+.... . .++.+|...|+-+|...
T Consensus 76 e~~~--~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ 116 (318)
T cd05570 76 EYVN--GGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG 116 (318)
T ss_pred cCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9997 34666666655332 2 35677888888888643
No 107
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=96.25 E-value=0.053 Score=44.75 Aligned_cols=105 Identities=12% Similarity=0.098 Sum_probs=68.3
Q ss_pred cCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 048614 40 VGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMRY 116 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vMEd 116 (165)
+|.|....||++.+.. + .+++|........ -.....+...|.++|+.+. .|..++-. ++.+.+...+||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~ 74 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIV----SRSEVTHTLAERTVLAQVN--CPFIVPLKFSFQSPEKLYLVLAF 74 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhCC--CCcEeceeeEEecCCeEEEEEcC
Confidence 5778888999998863 4 7888875422111 0123456777888887764 25555543 23466778899999
Q ss_pred CCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 117 LEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 L~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
++ ...|.+.+.....+ ..++.+|...|..+|...
T Consensus 75 ~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 113 (312)
T cd05585 75 IN--GGELFHHLQREGRFDLSRARFYTAELLCALENLHKFN 113 (312)
T ss_pred CC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 97 34676766554332 236678888898898754
No 108
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=96.25 E-value=0.066 Score=45.26 Aligned_cols=109 Identities=15% Similarity=0.030 Sum_probs=68.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~~ 112 (165)
.++.+|.|....||++.+. .| .+.||.-....... .-...+...|.++|+.... |..++-... .|.....+
T Consensus 5 ~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~il~~~~~--~~iv~~~~~~~~~~~~~l 78 (363)
T cd05628 5 SLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE----KEQVGHIRAERDILVEADS--LWVVKMFYSFQDKLNLYL 78 (363)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH----hhHHHHHHHHHHHHHhCCC--CCcceEEEEEecCCeEEE
Confidence 4678999999999999876 34 78888754221110 1123466778888776642 333333322 34556779
Q ss_pred EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
||||++ ...|.+.+.+.... . .++.+|...|.-+|...
T Consensus 79 v~E~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~g 121 (363)
T cd05628 79 IMEFLP--GGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLG 121 (363)
T ss_pred EEcCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 34677777654432 2 35667778888888653
No 109
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=96.24 E-value=0.065 Score=44.42 Aligned_cols=106 Identities=16% Similarity=0.087 Sum_probs=66.5
Q ss_pred ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM 114 (165)
.+|.|....||++.+. +| .++||.-..-.... .-.......|.++|...... | .+++++. .+.....+||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~~-~-~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI----DDDVECTMVEKRVLALAWEN-P-FLTHLYCTFQTKEHLFFVM 75 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----cchHHHHHHHHHHHHhccCC-C-CccCeeEEEEeCCEEEEEE
Confidence 5788888999999876 34 78888765432211 12334566677777544221 3 3344442 3556667999
Q ss_pred ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
||++ +..|...+..+... . .++.+|...|+-+|...
T Consensus 76 E~~~--~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 116 (316)
T cd05620 76 EFLN--GGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKG 116 (316)
T ss_pred CCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9997 34666666554332 2 35678888899999653
No 110
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=96.23 E-value=0.11 Score=40.61 Aligned_cols=104 Identities=18% Similarity=0.015 Sum_probs=64.6
Q ss_pred ecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 048614 39 EVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMRY 116 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vMEd 116 (165)
.+|.|....||++...++ .+++|.-..-.. .-...+...|.+.|+.+.. |..++-. +..+.....++|||
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~ 73 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP------QELKIKFLSEARILKQYDH--PNIVKLIGVCTQRQPIYIVMEL 73 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCC------HHHHHHHHHHHHHHHhCCC--CCcCeEEEEEecCCccEEEEEC
Confidence 577888889999987766 788886432110 0112355667777776532 4433322 44566778899999
Q ss_pred CCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614 117 LEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 L~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
++ + ..+.+.+.... .. -.++.++...|..+|...
T Consensus 74 ~~-~-~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 113 (250)
T cd05085 74 VP-G-GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN 113 (250)
T ss_pred CC-C-CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 97 3 46666654422 12 256677888888888653
No 111
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=96.22 E-value=0.043 Score=43.99 Aligned_cols=104 Identities=19% Similarity=0.124 Sum_probs=68.3
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
-++.+|.|....||++.+. ++ .+++|...... .-..++...|.++|+.+. .| .+++++ +.+.....
T Consensus 9 i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-------~~~~~~~~~e~~~l~~l~--h~-~i~~~~~~~~~~~~~~ 78 (280)
T cd06611 9 IIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-------EEELEDFMVEIDILSECK--HP-NIVGLYEAYFYENKLW 78 (280)
T ss_pred HHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-------HHHHHHHHHHHHHHHhCC--CC-ceeEEEEEEecCCeEE
Confidence 3456889999999999876 34 78888764211 122345667888887775 23 344444 34667778
Q ss_pred EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhc
Q 048614 112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~ 151 (165)
+||||++ ...|...+.+. ... -.++.++...|+.+|..
T Consensus 79 lv~e~~~--~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 122 (280)
T cd06611 79 ILIEFCD--GGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH 122 (280)
T ss_pred EEeeccC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9999998 44666666542 221 24677788888888853
No 112
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=96.22 E-value=0.12 Score=41.22 Aligned_cols=106 Identities=16% Similarity=0.093 Sum_probs=68.6
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
-++.+|.|....||++... +| .++||....... ..-...+...|...|+.+.. |. +++++ +.++....
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~ 75 (285)
T cd07861 4 KIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-----EEGVPSTAIREISLLKELQH--PN-IVCLQDVLMQESRLY 75 (285)
T ss_pred EeeEecccCceEEEEEEECCCCcEEEEEEeccccc-----cCCchHHHHHHHHHHHhcCC--CC-EeeeEEEEeeCCeEE
Confidence 3567899999999999875 44 788886542211 11222456678888877752 33 33344 34778889
Q ss_pred EEEecCCCCchHHHHHHHc----CCCCH----HHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIA----GIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~----g~~~~----~~a~~iG~~La~~h~~t 152 (165)
+|||+++ . .+.+.+.. +.... .++.+|...|+.+|...
T Consensus 76 ~v~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 121 (285)
T cd07861 76 LIFEFLS-M--DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR 121 (285)
T ss_pred EEEecCC-C--CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 2 45454433 22222 36888999999999753
No 113
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=96.21 E-value=0.079 Score=41.96 Aligned_cols=108 Identities=11% Similarity=0.024 Sum_probs=67.6
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
.+.+|.|....||++... ++ .++||....+... -.-...+...|.+.|+.+.. |..++-+ ++.+.....++
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM----DAKARQDCVKEIDLLKQLNH--PNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC----CHHHHHHHHHHHHHHHhCCC--cceeeeeeeEEECCeEEEE
Confidence 467899999999999875 34 8999975432211 01122345668888877643 3333222 34466778899
Q ss_pred EecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|+..+.. +... -.++.+|...|+.+|...
T Consensus 81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 126 (267)
T cd08228 81 LELAD--AGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR 126 (267)
T ss_pred EEecC--CCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 99998 3356554432 1212 256778899999999653
No 114
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=96.20 E-value=0.092 Score=40.81 Aligned_cols=107 Identities=20% Similarity=0.151 Sum_probs=72.3
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
++.++.|.-..||++.+.. + .+++|.-.... ...-...+...|.++++.+. .|..++-. .+.+.+...++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~~e~~~l~~l~--~~~~~~~~~~~~~~~~~~lv 77 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSN-----MSEKEREDALNEVKILKKLN--HPNIIKYYESFEEKGKLCIV 77 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCCcEEEEEEeeccc-----CChHHHHHHHHHHHHHHhcC--CCChhheEEEEecCCEEEEE
Confidence 4678888888999999873 4 78888754211 11234456777888888776 35433322 45566888899
Q ss_pred EecCCCCchHHHHHHHcC----CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAG----IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g----~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|++.+.+. ... ..++.++...|+.+|...
T Consensus 78 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 123 (258)
T cd08215 78 MEYAD--GGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK 123 (258)
T ss_pred EEecC--CCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99997 45777777652 221 357888888999999753
No 115
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=96.19 E-value=0.11 Score=40.27 Aligned_cols=106 Identities=18% Similarity=0.035 Sum_probs=71.7
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC--CCce
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDR--TMSL 111 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~--~~~~ 111 (165)
.+.++.|....||++.+. ++ .+++|....... ++-..++...|.+.++.+. .|..++-. ...+. ....
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~~ 77 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-----SEEELEALEREIRILSSLQ--HPNIVRYYGSERDEEKNTLN 77 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeecccc-----chHHHHHHHHHHHHHHHcC--CCCEeeEEEEEecCCCCeEE
Confidence 466788888899999887 45 899998753321 1334577788888888776 35444433 22233 4578
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
++||+.+ ..+|.+.+.+.... -.++.++...|+.+|..
T Consensus 78 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (260)
T cd06606 78 IFLEYVS--GGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN 120 (260)
T ss_pred EEEEecC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9999996 45788877665422 25777888888888864
No 116
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=96.18 E-value=0.013 Score=54.79 Aligned_cols=107 Identities=18% Similarity=0.137 Sum_probs=74.2
Q ss_pred CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---
Q 048614 32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--- 105 (165)
Q Consensus 32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--- 105 (165)
+..| ..+.+|-|----|||..+. .| .|-||++.+.. ...+.+|...|.++|+.+.- |.. -+.+..
T Consensus 12 ~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~------~~r~~e~~~~EieilkKLnh--~NI-Vk~f~iee~ 82 (732)
T KOG4250|consen 12 NYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES------SLRPRERWCREIEILKKLNH--PNI-VKLFDIEET 82 (732)
T ss_pred CcceeehhhhcCCccceeeeecccccccchhHHhhhhhc------ccchHHHHHHHHHHHHHcCc--hhh-hhhcccCCc
Confidence 3455 6677886666669999854 56 89999999876 24788999999999999872 221 111211
Q ss_pred -----cCCCceEEEecCCCCchHHHHHHHcCCC--------CHHHHHHHHHHHHHHH
Q 048614 106 -----DRTMSLIGMRYLEPPHIILRKGLIAGIK--------YPLLAEHMSEFMAKTL 149 (165)
Q Consensus 106 -----D~~~~~~vMEdL~~~~~~lr~~l~~g~~--------~~~~a~~iG~~La~~h 149 (165)
--..-+++|||++ +..||..|.+.+. +-.+..+++..|-.+|
T Consensus 83 ~~~~~~~~~~vlvmEyC~--gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr 137 (732)
T KOG4250|consen 83 KFLGLVTRLPVLVMEYCS--GGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR 137 (732)
T ss_pred cccCcccccceEEEeecC--CCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 2345689999998 5699999998763 2235556666666665
No 117
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=96.17 E-value=0.15 Score=41.38 Aligned_cols=105 Identities=12% Similarity=0.072 Sum_probs=70.2
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.++.+|.|....||++.+. ++ .+++|+-..... .-...+...|..+|+.+.. | .+.+++ +.+.....
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~ 79 (288)
T cd07871 9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE------EGAPCTAIREVSLLKNLKH--A-NIVTLHDIIHTERCLT 79 (288)
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc------CCcchhHHHHHHHHHhCCC--C-CEeeEEEEEcCCCeEE
Confidence 4788999999999999876 34 788897642211 1123466778888877643 3 344454 33556678
Q ss_pred EEEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||+++ + .|.+.+.. +... ..++.+|...|+-+|...
T Consensus 80 lv~e~~~-~--~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 123 (288)
T cd07871 80 LVFEYLD-S--DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK 123 (288)
T ss_pred EEEeCCC-c--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 2 56666644 2222 246788999999999754
No 118
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=96.17 E-value=0.072 Score=44.16 Aligned_cols=106 Identities=15% Similarity=0.055 Sum_probs=67.2
Q ss_pred ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~vM 114 (165)
.+|.|....||++...+ + .++||.-..-... -.-..++...|.+.|...... | ++++++.+ +.+...+||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~h-p-~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL----EDDDVECTMVERRVLALAWEH-P-FLTHLFCTFQTKEHLFFVM 75 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhhHHHHHHHHHHHHhccCC-C-CccceeeEEEcCCEEEEEE
Confidence 57889999999998763 4 6888976533211 112344556677776543222 2 34444433 556778999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ ...|...+...... ..++.+|...|+-+|...
T Consensus 76 e~~~--gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ 116 (316)
T cd05592 76 EYLN--GGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKG 116 (316)
T ss_pred cCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9997 34666666554332 236778888888898754
No 119
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=96.17 E-value=0.091 Score=41.59 Aligned_cols=104 Identities=18% Similarity=0.154 Sum_probs=69.0
Q ss_pred eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~ 112 (165)
-.+.+|.|....||++....+ .+++|...+. ....++...|.+.|+.+.. | .+++++.+ +.....+
T Consensus 8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~--------~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~l 76 (256)
T cd05059 8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREG--------AMSEDDFIEEAKVMMKLSH--P-NLVQLYGVCTKQRPIFI 76 (256)
T ss_pred hhhhhccCCCceEEEeEecCCccEEEEEeccC--------CCCHHHHHHHHHHHHhCCC--C-CEEEEEEEEcCCCceEE
Confidence 456788898899999987655 7888864321 1234566678888876642 3 45555533 4455679
Q ss_pred EEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||++ ...|.+.+.... .. -.++.+|...|+.+|...
T Consensus 77 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 120 (256)
T cd05059 77 VTEYMA--NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG 120 (256)
T ss_pred EEecCC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 346777775422 11 247788899999998754
No 120
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=96.13 E-value=0.079 Score=43.73 Aligned_cols=105 Identities=15% Similarity=0.121 Sum_probs=66.6
Q ss_pred EecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCc
Q 048614 38 KEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMS 110 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~ 110 (165)
+.+|.|....||+|... .| .+++|.-....-. .....+...|.++|+.+.. |..+ +++. .+....
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~niv-~~~~~~~~~~~~ 73 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-----VRDRVRTKMERDILAEVNH--PFIV-KLHYAFQTEGKL 73 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHhCCC--CCcc-cEEEEEEcCCEE
Confidence 56888888999998752 34 6888865422110 1223466678887776642 4433 3433 355667
Q ss_pred eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.+||||++ + ..|.+.+.+.... -.++.+|...|+.+|...
T Consensus 74 ~lv~e~~~-~-~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 118 (318)
T cd05582 74 YLILDFLR-G-GDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 118 (318)
T ss_pred EEEEcCCC-C-CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 79999997 3 4666666554332 246788899999999754
No 121
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=96.12 E-value=0.095 Score=41.73 Aligned_cols=105 Identities=16% Similarity=0.068 Sum_probs=68.5
Q ss_pred eEecCCCceeEEEEEEeC-----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc----
Q 048614 37 IKEVGDGNLNFVYIVVGS-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD---- 106 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D---- 106 (165)
++.+|.|..+.||++... .+ .++||...+... .....+...|.+.|+.+. -..+++++.+.
T Consensus 9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~------~~~~~~~~~ei~~l~~l~---~~~i~~~~~~~~~~~ 79 (284)
T cd05038 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE------EQHRSDFEREIEILRTLD---HENIVKYKGVCEKPG 79 (284)
T ss_pred heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc------hHHHHHHHHHHHHHHhCC---CCChheEEeeeecCC
Confidence 467899999999999753 24 788998653321 112345666666666553 23455665543
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++ ...|++.+.... .. -.++.+|...|+.+|...
T Consensus 80 ~~~~~lv~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 129 (284)
T cd05038 80 GRSLRLIMEYLP--SGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR 129 (284)
T ss_pred CCceEEEEecCC--CCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence 336789999997 347777775533 11 357788889999999654
No 122
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=96.11 E-value=0.089 Score=43.34 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=67.7
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC-----
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR----- 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~----- 107 (165)
.+.+|.|....||++.+. +| .++||.-...... .....+...|.++|+.+.. |..+ +++.+ +.
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--pniv-~~~~~~~~~~~~~~ 76 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH-----VSDATRILREIKLLRLLRH--PDIV-EIKHIMLPPSRREF 76 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc-----chhHHHHHHHHHHHHhCCC--CCEe-eecceEeccCCCCC
Confidence 467889999999999876 44 8999975432211 1223567788888877642 3322 23222 11
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
....+|||+++. .+.+.+.++... -.++.+|...|+-+|...
T Consensus 77 ~~~~lv~e~~~~---~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 123 (338)
T cd07859 77 KDIYVVFELMES---DLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTAN 123 (338)
T ss_pred ceEEEEEecCCC---CHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 235899999972 466666554332 247788899999999765
No 123
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=96.10 E-value=0.039 Score=45.02 Aligned_cols=108 Identities=19% Similarity=0.134 Sum_probs=70.2
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.++.+|.|....||++.+. +| .++||+-...--. -.-..++...|.++|+.+.. |. +.+++ ..|.....
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~~~ 77 (291)
T cd05612 5 RIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI----RLKQEQHVHNEKRVLKEVSH--PF-IIRLFWTEHDQRFLY 77 (291)
T ss_pred eeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh----hhHHHHHHHHHHHHHHhCCC--Cc-HhhhHhhhccCCeEE
Confidence 3578899999999999886 34 7999976421100 00123456678888876643 32 33333 34566678
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ ...|.+.+...... -.++.+|...|+.+|...
T Consensus 78 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 121 (291)
T cd05612 78 MLMEYVP--GGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKE 121 (291)
T ss_pred EEEeCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 34677776654432 246778888999999764
No 124
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=96.09 E-value=0.1 Score=42.82 Aligned_cols=105 Identities=18% Similarity=0.091 Sum_probs=69.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
.++.+|.|....||++.+. +| .+++|....... .-...+...|.++|+.+.. |..++-. ++.+.+...+
T Consensus 5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~l 76 (308)
T cd06615 5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK------PAIRNQIIRELKVLHECNS--PYIVGFYGAFYSDGEISI 76 (308)
T ss_pred EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC------HHHHHHHHHHHHHHHhCCC--CCCCeEEEEEeeCCEEEE
Confidence 4567899999999999876 44 677776543221 1123456778888887743 4333322 4457788899
Q ss_pred EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~ 150 (165)
+|||++ ...|.+.+...... ..++.+|...|+.+|.
T Consensus 77 v~ey~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~ 117 (308)
T cd06615 77 CMEHMD--GGSLDQVLKKAGRIPENILGKISIAVLRGLTYLRE 117 (308)
T ss_pred EeeccC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999997 34777766553322 3577888889999995
No 125
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=96.06 E-value=0.087 Score=43.97 Aligned_cols=106 Identities=11% Similarity=0.000 Sum_probs=67.2
Q ss_pred ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~vM 114 (165)
.+|.|....||++.+.. + .+.+|........ -.-...+...|..+|...... |..+ .++ +.+.....+||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~E~~~l~~~~~h-p~iv-~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN----DDEDIDWVQTEKHVFEQASNH-PFLV-GLHSCFQTESRLFFVI 75 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc----chhHHHHHHHHHHHHHhcCCC-CcCC-ceeeEEEeCCEEEEEE
Confidence 57889999999998763 4 7888886643321 112344566777776654332 3333 333 34567788999
Q ss_pred ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
||++ ...|...+...... . .++.+|...|.-+|...
T Consensus 76 E~~~--~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ 116 (329)
T cd05618 76 EYVN--GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 116 (329)
T ss_pred eCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34666666554332 2 36678888888888764
No 126
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=96.05 E-value=0.12 Score=41.66 Aligned_cols=107 Identities=16% Similarity=0.039 Sum_probs=68.8
Q ss_pred eeEecCCCceeEEEEEEe-----CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--
Q 048614 36 TIKEVGDGNLNFVYIVVG-----SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR-- 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~-- 107 (165)
.++.+|.|....||++.. ..+ .+++|+..+... . -..++...|..+|+.+.. |..++-.-.+..
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~---~---~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~ 79 (284)
T cd05079 8 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---G---NHIADLKKEIEILRNLYH--ENIVKYKGICTEDG 79 (284)
T ss_pred hceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc---H---HHHHHHHHHHHHHHhCCC--CCeeeeeeEEecCC
Confidence 567899999999999873 234 799998654322 1 123567778888877643 444443222222
Q ss_pred -CCceEEEecCCCCchHHHHHHHcCC-C-C----HHHHHHHHHHHHHHHhcc
Q 048614 108 -TMSLIGMRYLEPPHIILRKGLIAGI-K-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 -~~~~~vMEdL~~~~~~lr~~l~~g~-~-~----~~~a~~iG~~La~~h~~t 152 (165)
....++|||++ ...|.+.+.+.. . . -.++.+|...|+.+|...
T Consensus 80 ~~~~~lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g 129 (284)
T cd05079 80 GNGIKLIMEFLP--SGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ 129 (284)
T ss_pred CCceEEEEEccC--CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 44679999997 347777665432 1 1 256778888888888654
No 127
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=96.04 E-value=0.13 Score=42.12 Aligned_cols=108 Identities=17% Similarity=0.092 Sum_probs=68.0
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~~~~ 111 (165)
.++.+|.|...-||++.... + .++||.-....... .-...+...|.++|+.... | .+++++..- .....
T Consensus 5 ~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~~~~~~ 77 (305)
T cd05609 5 TIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL----RNQIQQVFVERDILTFAEN--P-FVVSMFCSFETKRHLC 77 (305)
T ss_pred EeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh----HHHHHHHHHHHHHHHhCCC--C-CeeeeEEEEecCCEEE
Confidence 45788999999999998763 3 79999654332100 0112455667777776543 3 455555433 33348
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
++|||++ +..|.+.+...... ..++.++...|+-+|...
T Consensus 78 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (305)
T cd05609 78 MVMEYVE--GGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYG 121 (305)
T ss_pred EEEecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999997 35677777554332 234567778888888765
No 128
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=96.03 E-value=0.078 Score=45.17 Aligned_cols=108 Identities=16% Similarity=0.096 Sum_probs=70.5
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.++.||.|....||++.+. ++ .++||.-...--.. .-...+...|.++|+.... | ++++++ +.+.+...
T Consensus 5 ~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~----~~~~~~~~~E~~il~~l~h--~-~iv~l~~~~~~~~~~~ 77 (381)
T cd05626 5 KIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLN----RNQVAHVKAERDILAEADN--E-WVVKLYYSFQDKDNLY 77 (381)
T ss_pred EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hHHHHHHHHHHHHHHhcCC--C-CeeeeEEEEecCCEEE
Confidence 5788999999999999875 34 78888764221000 1123466778888876542 3 344433 34567788
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
+||||++ ...|.+.+......+ .++.+|...|..+|...
T Consensus 78 lv~E~~~--gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g 121 (381)
T cd05626 78 FVMDYIP--GGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG 121 (381)
T ss_pred EEEecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 346666666554332 34667888888888755
No 129
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=96.03 E-value=0.094 Score=43.71 Aligned_cols=106 Identities=9% Similarity=-0.024 Sum_probs=67.3
Q ss_pred ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM 114 (165)
.+|.|....||++.+. ++ .+.||.-...... -.-...+...|..+|+..... |. ++.++. .+.....+||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~~e~~il~~~~~h-p~-Iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVN----DDEDIDWVQTEKHVFETASNH-PF-LVGLHSCFQTESRLFFVI 75 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccCC-CC-CCceEEEEEcCCEEEEEE
Confidence 5788888999999876 34 7888876532211 112345566777777765432 33 333343 3566779999
Q ss_pred ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
||++ ...|...+.+.... . .++.+|...|+-+|...
T Consensus 76 e~~~--~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 116 (329)
T cd05588 76 EFVS--GGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERG 116 (329)
T ss_pred eCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34666666554332 2 46678888888888754
No 130
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=96.02 E-value=0.094 Score=41.14 Aligned_cols=102 Identities=14% Similarity=0.013 Sum_probs=62.8
Q ss_pred ecCCCceeEEEEEEeCCCe------------EEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc
Q 048614 39 EVGDGNLNFVYIVVGSSGS------------FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD 106 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~gs------------vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D 106 (165)
.+|.|..+.||++.+.+.+ +++|. .+.. ... ..+...|+..|+.+.. |..++-+-.+-
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~----~~~~--~~~--~~~~~~e~~~l~~l~h--~~i~~~~~~~~ 71 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKV----LGSD--HRD--SLAFFETASLMSQLSH--KHLVKLYGVCV 71 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeec----cccc--hhh--HHHHHHHHHHHHcCCC--cchhheeeEEe
Confidence 4788888899999886332 33332 2211 111 4566677777766532 44443332222
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t 152 (165)
.....+|||+++ ...|.+.+.... .. -.++.+|...|+.+|...
T Consensus 72 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 121 (259)
T cd05037 72 RDENIMVEEYVK--FGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK 121 (259)
T ss_pred cCCcEEEEEcCC--CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 267899999998 357877776543 21 246778899999999653
No 131
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=96.01 E-value=0.21 Score=40.01 Aligned_cols=108 Identities=15% Similarity=0.028 Sum_probs=68.4
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------C
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-------R 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------~ 107 (165)
++.+|.|....||++.+. +| .+++|........ . -...+...|.+.++.+..+--..+.+++.+- .
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~--~---~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE--D---GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC--C---CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 567899999999999876 34 7899976543221 1 1123455688888877655333445555331 2
Q ss_pred CCceEEEecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t 152 (165)
....++||+++. .++..+.... .. -.++.+|...|.-+|...
T Consensus 80 ~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 128 (288)
T cd07863 80 TKVTLVFEHVDQ---DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC 128 (288)
T ss_pred ceEEEEEccccc---CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 335799999982 5555554421 11 246778888899898654
No 132
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=95.99 E-value=0.067 Score=43.15 Aligned_cols=109 Identities=17% Similarity=0.147 Sum_probs=68.5
Q ss_pred eEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-CCCc
Q 048614 37 IKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-RTMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~~~~ 110 (165)
.+.+|.|....||++... ++ .+.||...... . .......++...|..+|+.+... |..++-...+. ....
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~-~--~~~~~~~~~~~~E~~~l~~~~~~-~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKAT-I--VQKAKTAEHTRTERQVLEAVRRC-PFLVTLHYAFQTDTKL 80 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHH-H--HhhhhHHHHHHHHHHHHHhccCC-cchhhhheeeecCCEE
Confidence 467899999999998753 33 68888754211 1 11233446777888888877542 44444333333 3445
Q ss_pred eEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 048614 111 LIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~ 151 (165)
.+||||++ + ..|.+.+..+... . ..+.++...|+.+|..
T Consensus 81 ~lv~e~~~-~-~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~ 124 (288)
T cd05583 81 HLILDYVN-G-GELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL 124 (288)
T ss_pred EEEEecCC-C-CcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 59999997 3 4666766654432 2 3566888888888864
No 133
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.97 E-value=0.1 Score=43.62 Aligned_cols=100 Identities=15% Similarity=0.093 Sum_probs=65.2
Q ss_pred eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhcc-CCCCCc-------eEEEEcC
Q 048614 36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQL-CPDHVP-------EVYHFDR 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~-~p~~vP-------~v~~~D~ 107 (165)
.+..+ .|.-|-||+|.+++|..|+|.-. .+.+|......++..+++- .|..+| ..+..+.
T Consensus 11 ~v~~i-~~~~~~v~~v~T~~G~~~Lk~~~-----------~~~~~l~~~~~~~~~L~~~G~~~~~~~~~t~~G~~~~~~~ 78 (309)
T TIGR02904 11 QPEEM-EQVTGKLFKVYTDQGVFALKKLY-----------ADRNTIESFVSQIQVLSEKGFSRIVPVYPTKDGSYYLFHG 78 (309)
T ss_pred Cceee-ecccCcEEEEEeCCCCEEEEEec-----------cchHhHHHHHHHHHHHHHcCCCcCCceeecCCCCeeeEEC
Confidence 34444 33456789999998899999865 1235777888888777552 222222 2333444
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY 156 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~ 156 (165)
+...++|++++ +. .....+.-+.++|+.||++|..+..+.
T Consensus 79 ~~~~~L~~wi~-G~--------~~~~~~~~~~~~~~~LA~lH~~~~~~~ 118 (309)
T TIGR02904 79 HFLYYLMPWLD-IE--------RNEERNYQHESMFQELALLHRKTVKTE 118 (309)
T ss_pred CEEEEEeCCcc-cc--------cccCCHHHHHHHHHHHHHHHHhhhCCC
Confidence 55578899998 31 111223568999999999999998744
No 134
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=95.96 E-value=0.11 Score=42.25 Aligned_cols=106 Identities=14% Similarity=0.060 Sum_probs=66.9
Q ss_pred eeEecCCCceeEEEEEEeCC-----------------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-----------------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPD 97 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-----------------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~ 97 (165)
-.+.+|.|..-.||++...+ + .+.||+..+.... -...+...|.+.|+.+.. |
T Consensus 9 ~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~E~~~l~~l~h--~- 79 (304)
T cd05096 9 FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANK------NARNDFLKEVKILSRLKD--P- 79 (304)
T ss_pred eeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCH------HHHHHHHHHHHHHhhcCC--C-
Confidence 34678999999999987532 2 4777876543211 112345567777765532 3
Q ss_pred CCceEE--EEcCCCceEEEecCCCCchHHHHHHHcCCC------------------------CHHHHHHHHHHHHHHHhc
Q 048614 98 HVPEVY--HFDRTMSLIGMRYLEPPHIILRKGLIAGIK------------------------YPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 98 ~vP~v~--~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~------------------------~~~~a~~iG~~La~~h~~ 151 (165)
.+.+++ +.+.+...++|||++ ...|.+.+..... ...++.+|...|+-+|..
T Consensus 80 niv~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~ 157 (304)
T cd05096 80 NIIRLLGVCVDEDPLCMITEYME--NGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL 157 (304)
T ss_pred CeeEEEEEEecCCceEEEEecCC--CCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 344444 345677899999997 3466666544211 125888999999999976
Q ss_pred c
Q 048614 152 T 152 (165)
Q Consensus 152 t 152 (165)
.
T Consensus 158 ~ 158 (304)
T cd05096 158 N 158 (304)
T ss_pred C
Confidence 4
No 135
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=95.95 E-value=0.13 Score=40.23 Aligned_cols=103 Identities=18% Similarity=0.088 Sum_probs=65.8
Q ss_pred ecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceEEEe
Q 048614 39 EVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSLIGMR 115 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~~vME 115 (165)
.+|.|....||++.+.++ .+++|...... ..-...+...|.++++.+.. | .++++ +..+.....++||
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~------~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~~v~e 72 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTL------PPDLKRKFLQEAEILKQYDH--P-NIVKLIGVCVQKQPIYIVME 72 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccC------CHHHHHHHHHHHHHHHhCCC--C-CeEEEEEEEecCCCeEEEEE
Confidence 567788888999998756 89999654221 11123466677777776642 3 33344 3456677889999
Q ss_pred cCCCCchHHHHHHHcC-C-CC----HHHHHHHHHHHHHHHhcc
Q 048614 116 YLEPPHIILRKGLIAG-I-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g-~-~~----~~~a~~iG~~La~~h~~t 152 (165)
+++ ...|.+.+... . .. -.++.++...|+.+|...
T Consensus 73 ~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~ 113 (251)
T cd05041 73 LVP--GGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN 113 (251)
T ss_pred cCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 997 34666666442 2 11 245667778888888544
No 136
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=95.94 E-value=0.16 Score=40.30 Aligned_cols=109 Identities=16% Similarity=0.050 Sum_probs=68.7
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC--Cc
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT--MS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~--~~ 110 (165)
.+.++.|....||++.+. +| .++||+....... .+..-...+...|...|+.+.. |. +++++.+ |+. ..
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPES--PETSKEVNALECEIQLLKNLLH--ER-IVQYYGCLRDPMERTL 81 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCC--cccHHHHHHHHHHHHHHHhcCC--CC-eeeEEeEeccCCCceE
Confidence 567888888899999875 34 7999976432211 1112223566678888876642 33 3344443 322 24
Q ss_pred eEEEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614 111 LIGMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
.++||+++ ...|++.+.+... . -.++.++...|+.+|...
T Consensus 82 ~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (265)
T cd06652 82 SIFMEHMP--GGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM 126 (265)
T ss_pred EEEEEecC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 47999997 4477777755332 2 357888999999999765
No 137
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=95.92 E-value=0.22 Score=39.79 Aligned_cols=105 Identities=14% Similarity=0.114 Sum_probs=69.3
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~ 111 (165)
.++.++.|...-||++.+. +| .++||....... .-..++...|.+.|+.+.. ..+++++. .+.+...
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~ 74 (284)
T cd07836 4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE------EGTPSTAIREISLMKELKH---ENIVRLHDVIHTENKLM 74 (284)
T ss_pred EeeeeccCCceEEEEEEECCCCeEEEEEEeccccc------ccchHHHHHHHHHHHhhcC---CCEeeeeeeEeeCCcEE
Confidence 4678899999999999986 45 789997653221 1223566778888877642 23444444 3566789
Q ss_pred EEEecCCCCchHHHHHHHcCC----CC----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGI----KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~----~~----~~~a~~iG~~La~~h~~t 152 (165)
+|||+++ + .+.+.+.... .. -.++.+|...|+.+|...
T Consensus 75 lv~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (284)
T cd07836 75 LVFEYMD-K--DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR 120 (284)
T ss_pred EEEecCC-c--cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 3 4555554322 12 246778888888888653
No 138
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=95.88 E-value=0.26 Score=39.25 Aligned_cols=105 Identities=13% Similarity=0.151 Sum_probs=65.4
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC--CCc
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDR--TMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~--~~~ 110 (165)
+..+|.|..+.||++.+. ++ .+++|+....... ....+...|...|+..... |. +++++ +.|. ...
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~------~~~~~~~~e~~~l~~l~~h-~~-i~~~~~~~~~~~~~~~ 75 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS------LEQVNNLREIQALRRLSPH-PN-ILRLIEVLFDRKTGRL 75 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCC------chhhhHHHHHHHHhhcCCC-CC-ccceEEEEecCCCCcE
Confidence 567899999999999875 34 7888976533221 1122334576666655432 33 33333 3455 678
Q ss_pred eEEEecCCCCchHHHHHHHcCC-C-C----HHHHHHHHHHHHHHHhcc
Q 048614 111 LIGMRYLEPPHIILRKGLIAGI-K-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~-~-~----~~~a~~iG~~La~~h~~t 152 (165)
.+|||+++ . .+.+.+.+.. . . -.++.+|...|..+|...
T Consensus 76 ~lv~e~~~--~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 120 (282)
T cd07831 76 ALVFELMD--M-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG 120 (282)
T ss_pred EEEEecCC--c-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999997 3 4555565422 2 2 246778888888888664
No 139
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=95.86 E-value=0.16 Score=39.51 Aligned_cols=103 Identities=16% Similarity=0.089 Sum_probs=69.9
Q ss_pred ecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 39 EVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.+|.|....||++.+.. + .++||........ . ...+...|.+.++.+. .|.. ++++ ..+.....
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~-----~-~~~~~~~e~~~l~~~~--~~~i-~~~~~~~~~~~~~~ 72 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE-----E-ERKDFLKEARVMKKLG--HPNV-VRLLGVCTEEEPLY 72 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccch-----h-HHHHHHHHHHHHhhcC--CCCh-heeeeeecCCCceE
Confidence 47788888999998863 4 7899987643321 1 4567778888888876 3433 3333 34567789
Q ss_pred EEEecCCCCchHHHHHHHcC---------CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAG---------IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g---------~~~-----~~~a~~iG~~La~~h~~t 152 (165)
++|||++ ..+|.+.+... ... -.++.++...|+.+|...
T Consensus 73 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 125 (262)
T cd00192 73 LVLEYME--GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK 125 (262)
T ss_pred EEEEecc--CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999996 34777777664 221 257778888888888743
No 140
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=95.85 E-value=0.12 Score=40.47 Aligned_cols=107 Identities=20% Similarity=0.097 Sum_probs=68.0
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
...++.|...-||++... +| .+++|.-.... . . .....+...|.+.|+.+.. |..++-. ++.+.....++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~-~---~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 77 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK-M-N---RREREEAIDEARVLAKLDS--SYIIRYYESFLDKGKLNIV 77 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhh-C-C---HHHHHHHHHHHHHHHhcCC--CCeehheeeeccCCEEEEE
Confidence 456888888889999876 34 78888643211 0 0 2234566667777776542 3333322 33455678999
Q ss_pred EecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||++ ..+|++.+... ... -.++.++...|.-+|...
T Consensus 78 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~ 121 (256)
T cd08529 78 MEYAE--NGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK 121 (256)
T ss_pred EEeCC--CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99997 34777777653 222 246778888888888643
No 141
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=95.84 E-value=0.15 Score=42.63 Aligned_cols=104 Identities=17% Similarity=0.129 Sum_probs=68.3
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~ 111 (165)
.++.+|.|....||++.+.. | .+++|....... ....++...|.+.|+.+.. |. ++++ ++.+.....
T Consensus 9 ~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~ 79 (333)
T cd06650 9 KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK------PAIRNQIIRELQVLHECNS--PY-IVGFYGAFYSDGEIS 79 (333)
T ss_pred eeccccCCCCEEEEEEEECCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHHCCC--Cc-ccceeEEEEECCEEE
Confidence 45678999999999998873 4 566665443221 1123566778888877642 33 3333 345777889
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~ 150 (165)
+||||+. ...|.+.+...... ..++.++...|+.+|.
T Consensus 80 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~ 121 (333)
T cd06650 80 ICMEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 121 (333)
T ss_pred EEEecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999997 45777776553322 2466678888888885
No 142
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=95.82 E-value=0.16 Score=40.23 Aligned_cols=105 Identities=20% Similarity=0.071 Sum_probs=65.9
Q ss_pred ecCCCceeEEEEEEeC---CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGS---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM 114 (165)
++|.|....||++... ++ .+.+|....... . +...+....|...|+.... |..++-+-.+..+...++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~--~---~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~lv~ 74 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN--D---PALKDELLREANVMQQLDN--PYIVRMIGICEAESWMLVM 74 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC--c---HHHHHHHHHHHHHHHhCCC--CCcceEEEEEcCCCcEEEE
Confidence 5788888899998532 33 788887542211 0 1122445667777766532 4444433344667788999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|+++ ...|.+.+...... -.++.++...|..+|...
T Consensus 75 e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 115 (257)
T cd05116 75 ELAE--LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETN 115 (257)
T ss_pred ecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34676666554322 357778888888888764
No 143
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=95.82 E-value=0.072 Score=43.08 Aligned_cols=105 Identities=15% Similarity=0.013 Sum_probs=63.5
Q ss_pred cCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEEEec
Q 048614 40 VGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRTMSLIGMRY 116 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~~~~~vMEd 116 (165)
+|.|....||++.+. +| .++||.-....... .-..++...|.++|+.++. |..++-...+ +.....+||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv~e~ 74 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK----RKGYEGAMVEKRILAKVHS--RFIVSLAYAFQTKTDLCLVMTI 74 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh----hHHHHHHHHHHHHHHhCCC--CcEeeeeEEEcCCCeEEEEEeC
Confidence 577888899999876 44 78888754321110 1123456678888876643 4333333333 34456799999
Q ss_pred CCCCchHHHHHHHc----CC-CC----HHHHHHHHHHHHHHHhcc
Q 048614 117 LEPPHIILRKGLIA----GI-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 L~~~~~~lr~~l~~----g~-~~----~~~a~~iG~~La~~h~~t 152 (165)
++ ...|+..+.. +. .. -.++.+|...|+-+|...
T Consensus 75 ~~--~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 117 (280)
T cd05608 75 MN--GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR 117 (280)
T ss_pred CC--CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 97 3456554422 11 11 136778888898898753
No 144
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=95.81 E-value=0.21 Score=39.03 Aligned_cols=107 Identities=16% Similarity=0.073 Sum_probs=68.1
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
.++.+|.|....||++.+.. + .++||......- . .-...+...|.+.|+.+.. |..++-. .+.+.....+
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~--~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~l 76 (256)
T cd08220 4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM---T--KDERLAAQNECQVLKLLSH--PNIIEYYENFLEDKALMI 76 (256)
T ss_pred EEEEecccCceEEEEEEEcCCCcEEEEEEEecccc---c--cHHHHHHHHHHHHHhhCCC--CchhheeeeEecCCEEEE
Confidence 35778999888999988753 3 788888642211 0 1123567778888887743 4333222 2345677899
Q ss_pred EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhc
Q 048614 113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~ 151 (165)
|||+++ ...|.+.+.+. ... -.++.++...|+.+|..
T Consensus 77 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 120 (256)
T cd08220 77 VMEYAP--GGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120 (256)
T ss_pred EEecCC--CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 999997 34676766552 222 23556788888888854
No 145
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=95.79 E-value=0.12 Score=41.41 Aligned_cols=107 Identities=17% Similarity=0.037 Sum_probs=70.0
Q ss_pred eeEecCCCceeEEEEEEeC-CC-----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM 109 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~ 109 (165)
.++.+|.|....||++... +| .+++|.... ...+....+...|+..|+.+. .|..++-.-.+..+.
T Consensus 11 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~------~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~ 82 (279)
T cd05057 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLRE------ETSPKANKEILDEAYVMASVD--HPHVVRLLGICLSSQ 82 (279)
T ss_pred EcceecCCCCccEEEEEEecCCCCcceEEEEEeccC------CCCHHHHHHHHHHHHHHHhCC--CCCcceEEEEEecCc
Confidence 4578899999999999764 22 356665431 111223345666777777663 255555554555588
Q ss_pred ceEEEecCCCCchHHHHHHHcCC--C----CHHHHHHHHHHHHHHHhcc
Q 048614 110 SLIGMRYLEPPHIILRKGLIAGI--K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g~--~----~~~~a~~iG~~La~~h~~t 152 (165)
..++|||++ ...+.+.+.... . .-.++.+|...|+.+|...
T Consensus 83 ~~~v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 129 (279)
T cd05057 83 VQLITQLMP--LGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR 129 (279)
T ss_pred eEEEEecCC--CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999997 346777766532 1 1357788999999999754
No 146
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=95.79 E-value=0.13 Score=42.55 Aligned_cols=106 Identities=14% Similarity=0.062 Sum_probs=61.4
Q ss_pred ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHH-HHHhhccCCCCCceEE-EEcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALA-LKEHGQLCPDHVPEVY-HFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~-L~~~~~~~p~~vP~v~-~~D~~~~~~vM 114 (165)
.+|.|....||++.+. +| .++||.-...... ..-...+...|... ++... .|..+.-.. +.+.+...+||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~e~~~~l~~~~--h~~iv~~~~~~~~~~~~~lv~ 75 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL----KKKEQNHIMAERNVLLKNLK--HPFLVGLHYSFQTAEKLYFVL 75 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH----HhhHHHHHHHHHHHHHHhCC--CCCccceeeEEEcCCEEEEEE
Confidence 5788888999999886 34 6888875422110 01112233333332 32221 243333222 34667788999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ + ..|...+...... ..++.+|...|+-+|...
T Consensus 76 e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 116 (321)
T cd05603 76 DYVN-G-GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLN 116 (321)
T ss_pred cCCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 3 3555555544332 246778899999999753
No 147
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=95.79 E-value=0.26 Score=39.59 Aligned_cols=107 Identities=16% Similarity=0.005 Sum_probs=66.9
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
++.+|.|....||++.+.. + .++||.-..- .......++...|.++|+.+.. |..++-. ++.+.+...+|
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~-----~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDS-----EENEEVKETTLRELKMLRTLKQ--ENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEecc-----cccccchhhHHHHHHHHHhCCC--ccccchhhhEecCCEEEEE
Confidence 5678989999999999863 4 6888854311 1223345677788888887753 3333222 23455677899
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||++. ..+......+... -.++.+|...|..+|...
T Consensus 79 ~e~~~~--~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 120 (287)
T cd07848 79 FEYVEK--NMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND 120 (287)
T ss_pred EecCCC--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999983 2343322222221 247788888888888553
No 148
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=95.78 E-value=0.016 Score=51.28 Aligned_cols=80 Identities=24% Similarity=0.252 Sum_probs=56.2
Q ss_pred eeEecCCCceeEEEEEEeCCC------eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR-- 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~-- 107 (165)
-+..+|-|.+--||.+.+.+- +|+-|.++..-.. ..|...|.++|+...- .+.|.+|+.-+
T Consensus 81 llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkK--------l~Ra~tE~eIL~~lDH---PFlPTLYa~fet~ 149 (459)
T KOG0610|consen 81 LLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKK--------LKRAQTEREILSLLDH---PFLPTLYASFETD 149 (459)
T ss_pred HHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhH--------HHHHHHHHHHHHhcCC---Cccchhhheeecc
Confidence 467789999999999998742 5666666654332 3699999999976643 35688886543
Q ss_pred CCceEEEecCCC-CchHHHH
Q 048614 108 TMSLIGMRYLEP-PHIILRK 126 (165)
Q Consensus 108 ~~~~~vMEdL~~-~~~~lr~ 126 (165)
+-..++||||+. +.-.||+
T Consensus 150 ~~~cl~meyCpGGdL~~Lrq 169 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQ 169 (459)
T ss_pred ceeEEEEecCCCccHHHHHh
Confidence 456789999995 3334444
No 149
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=95.78 E-value=0.071 Score=42.72 Aligned_cols=107 Identities=16% Similarity=0.014 Sum_probs=66.9
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
.++.+|.|....||++.+. ++ .+++|...... ..-..++...|.+.|+.... |..++-. .+.+.....+
T Consensus 8 ~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~l 79 (277)
T cd06642 8 KLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE------AEDEIEDIQQEITVLSQCDS--PYITRYYGSYLKGTKLWI 79 (277)
T ss_pred HHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc------chHHHHHHHHHHHHHHcCCC--CccHhhhcccccCCceEE
Confidence 3456788888899999765 34 78888654221 11123456667777765532 3322221 2346677889
Q ss_pred EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
||||++ ...+.+.+..+... ..++.+|...|+-+|...
T Consensus 80 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (277)
T cd06642 80 IMEYLG--GGSALDLLKPGPLEETYIATILREILKGLDYLHSER 121 (277)
T ss_pred EEEccC--CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 999998 34676766555432 246778888888888543
No 150
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=95.77 E-value=0.11 Score=40.91 Aligned_cols=107 Identities=13% Similarity=0.093 Sum_probs=69.4
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~~ 112 (165)
.+.+|.|....||++... +| .+++|.-..+-... .-...+...|.++|+.+.. |. ++++ ++.+.....+
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~~~ei~~l~~~~~--~~-i~~~~~~~~~~~~~~l 79 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD----AKARQDCLKEIDLLKQLDH--PN-VIKYLASFIENNELNI 79 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccc----hhhHHHHHHHHHHHHhCCC--CC-eeeeeeeeecCCeEEE
Confidence 466889999999999987 45 78888765433211 1234677888888887643 22 2222 3456677889
Q ss_pred EEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||++ ...|...+.. +... -.++.+|...|+.+|...
T Consensus 80 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 126 (267)
T cd08224 80 VLELAD--AGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR 126 (267)
T ss_pred EEecCC--CCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 3466665543 1112 245778888888888743
No 151
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=95.77 E-value=0.026 Score=45.18 Aligned_cols=76 Identities=24% Similarity=0.277 Sum_probs=57.7
Q ss_pred eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 048614 36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMR 115 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vME 115 (165)
.+.+++-|.-.+||.+.-.++.+++|..++= .+..=...|+++|+.++. -..+|++|+||.+... ||
T Consensus 26 v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~d---------s~r~~l~kEakiLeil~g--~~~~p~vy~yg~~~i~--me 92 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWRGGEVALKVRRRD---------SPRRNLEKEAKILEILAG--EGVTPEVYFYGEDFIR--ME 92 (201)
T ss_pred hhhhhhcccccEEEEeeccCceEEEEEecCC---------cchhhHHHHHHHHHHhhh--cCCCceEEEechhhhh--hh
Confidence 5678889999999999988777888876632 233345689999987765 3678999999988766 99
Q ss_pred cCCCCchHHHH
Q 048614 116 YLEPPHIILRK 126 (165)
Q Consensus 116 dL~~~~~~lr~ 126 (165)
|+. +..|.+
T Consensus 93 ~i~--G~~L~~ 101 (201)
T COG2112 93 YID--GRPLGK 101 (201)
T ss_pred hhc--Ccchhh
Confidence 997 445544
No 152
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=95.75 E-value=0.16 Score=40.47 Aligned_cols=110 Identities=20% Similarity=0.092 Sum_probs=69.0
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC--CC
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR--TM 109 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~--~~ 109 (165)
..+.+|.|....||++.+. .| .+++|........ ....-...+...|..+|+.+.. |..++ ++. .+. ..
T Consensus 6 ~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~e~~~l~~l~h--~~i~~-~~~~~~~~~~~~ 80 (266)
T cd06651 6 RGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPES--PETSKEVSALECEIQLLKNLQH--ERIVQ-YYGCLRDRAEKT 80 (266)
T ss_pred ccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCC--chhHHHHHHHHHHHHHHHHcCC--CCeee-EEEEEEcCCCCE
Confidence 3467899999999999875 34 7888876533211 1111123456667778877643 44443 332 232 34
Q ss_pred ceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 110 SLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
..++||+++ ...|.+.+.++... -.++.++...|+.+|...
T Consensus 81 ~~l~~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ 126 (266)
T cd06651 81 LTIFMEYMP--GGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM 126 (266)
T ss_pred EEEEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 568999997 34677777654432 146788888898888655
No 153
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=95.73 E-value=0.11 Score=40.97 Aligned_cols=109 Identities=11% Similarity=0.027 Sum_probs=68.8
Q ss_pred EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCC-CChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWP-MTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~-l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
+.+|.|-...||++.+. ++ .+++|........ .... -...+...|...|+.+.. |..++-. ++.+.+...++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~--~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~v 81 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNT--SSEQEEVVEALRKEIRLMARLNH--PHIIRMLGATCEDSHFNLF 81 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCC--chhHHHHHHHHHHHHHHHHHcCC--CceehhhceeccCCeEEEE
Confidence 45788888999999874 34 8999986533211 1111 123566778888877643 3322221 23366777899
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+.. ...|.+.+.+.... -.++.+|...|+.+|...
T Consensus 82 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~ 123 (268)
T cd06630 82 VEWMA--GGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ 123 (268)
T ss_pred EeccC--CCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99997 45777776553332 245688888888888653
No 154
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=95.72 E-value=0.26 Score=41.26 Aligned_cols=107 Identities=19% Similarity=0.137 Sum_probs=68.0
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR------ 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------ 107 (165)
.+..+|.|....||++.+. +| .++||....-. .......+...|.++|+.+.. |..++-.-.+..
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 19 DLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-----QSELFAKRAYRELRLLKHMKH--ENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred EEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-----cchHHHHHHHHHHHHHHhcCC--CCccceeeeecCCccccc
Confidence 6789999999999999865 45 89999764211 112334567788888887753 333322211222
Q ss_pred -CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614 108 -TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 -~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
..+.+|||+++. .+...+..+.... .++.+|...|+.+|...
T Consensus 92 ~~~~~lv~e~~~~---~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~g 138 (343)
T cd07880 92 FHDFYLVMPFMGT---DLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAG 138 (343)
T ss_pred cceEEEEEecCCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 235899999973 4555554444322 46778888888888754
No 155
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=95.72 E-value=0.1 Score=41.91 Aligned_cols=104 Identities=16% Similarity=0.063 Sum_probs=67.7
Q ss_pred EecCCCceeEEEEEEeC-----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 048614 38 KEVGDGNLNFVYIVVGS-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTM 109 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~ 109 (165)
+.+|.|....||++... .+ .+.+|....... .-...+...|.+.|+.+.. |. +++++. .+...
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~E~~~l~~l~h--~n-iv~~~~~~~~~~~ 81 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN------PQQWGEFQQEASLMAELHH--PN-IVCLLGVVTQEQP 81 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC------HHHHHHHHHHHHHHhhCCC--CC-eeeEEEEEecCCc
Confidence 78899999999998741 23 788888763211 1112455667778877643 33 344443 46677
Q ss_pred ceEEEecCCCCchHHHHHHHcCCC----------------------CHHHHHHHHHHHHHHHhcc
Q 048614 110 SLIGMRYLEPPHIILRKGLIAGIK----------------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g~~----------------------~~~~a~~iG~~La~~h~~t 152 (165)
..++|||++ ..+|++.+..... .-.++.++...|+.+|...
T Consensus 82 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 144 (283)
T cd05090 82 VCMLFEYLN--QGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF 144 (283)
T ss_pred eEEEEEcCC--CCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC
Confidence 789999997 3477776642210 1247788999999999765
No 156
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=95.71 E-value=0.21 Score=39.19 Aligned_cols=103 Identities=18% Similarity=0.161 Sum_probs=68.7
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~ 112 (165)
++.+|.|....||++.+.+ | .++||...... .+....+...|.+.++.+. .| .+++++ +.+.....+
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~------~~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~~~~~~l 76 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDG------DEEFRKQLLRELKTLRSCE--SP-YVVKCYGAFYKEGEISI 76 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCc------chHHHHHHHHHHHHHHhcC--CC-CeeeEEEEEccCCeEEE
Confidence 4567777777889998874 5 78988764321 1123456667777777665 34 344444 345567889
Q ss_pred EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHh
Q 048614 113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~ 150 (165)
+|||++ ...|++.+..... . -.++.++...|+.+|.
T Consensus 77 v~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~ 117 (264)
T cd06623 77 VLEYMD--GGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHT 117 (264)
T ss_pred EEEecC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 999998 4578887765332 2 2577888899999997
No 157
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=95.71 E-value=0.33 Score=38.10 Aligned_cols=104 Identities=20% Similarity=0.136 Sum_probs=67.8
Q ss_pred eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
-.+.+|.|....||++.+.++ .+++|.-..- ..+......|.+.|+.+.. |..++-. ++.+.....++
T Consensus 8 ~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 8 LVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG--------AMSEEDFIEEAQVMMKLSH--PKLVQLYGVCTERSPICLV 77 (256)
T ss_pred EEeeecCcccceEEEEEEeCCCeEEEEECCCC--------CCCHHHHHHHHHHHHhCCC--CCeeeEEEEEccCCceEEE
Confidence 357788898899999987655 7888854311 2344567778888887753 4444332 23355677899
Q ss_pred EecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 048614 114 MRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~ 151 (165)
||++. ...|.+.+... ... -.++.++...|+.+|..
T Consensus 78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (256)
T cd05112 78 FEFME--HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS 119 (256)
T ss_pred EEcCC--CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99998 33676666542 222 24566777888888844
No 158
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=95.70 E-value=0.15 Score=42.22 Aligned_cols=103 Identities=14% Similarity=0.089 Sum_probs=66.0
Q ss_pred ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~vM 114 (165)
.+|.|....||++.+. +| .+.+|......-.. .-...+...|.+.|+.... | ++++++ +.+.+...+||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~----~~~~~~~~~e~~~l~~~~h--p-~i~~~~~~~~~~~~~~lv~ 74 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA----KDEVAHTLTENRVLQNSRH--P-FLTALKYSFQTHDRLCFVM 74 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhCCC--C-CCCceEEEEEcCCEEEEEE
Confidence 5788889999999875 44 78888765332110 1123455667777765432 3 344443 34556678999
Q ss_pred ecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHh
Q 048614 115 RYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLF 150 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~ 150 (165)
||++ ...|...+..+...+ .++.+|...|+-+|.
T Consensus 75 E~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~ 113 (325)
T cd05594 75 EYAN--GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 113 (325)
T ss_pred eCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9998 346666666554332 467788889999995
No 159
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=95.70 E-value=0.3 Score=38.92 Aligned_cols=105 Identities=15% Similarity=0.094 Sum_probs=68.1
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~ 112 (165)
...+|.|..+.||++.+. +| .++||.-...... .-...+...|..+++.+. .|..+ +++ +.+.....+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-----~~~~~~~~~e~~~l~~~~--~~~i~-~~~~~~~~~~~~~~ 76 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-----GGIPNQALREIKALQACQ--HPYVV-KLLDVFPHGSGFVL 76 (286)
T ss_pred EeecccCCCcEEEEEEECCCCceEEEEEEEccccc-----chhhHHHHHHHHHHHhCC--CCCCc-ceeeEEecCCeeEE
Confidence 467899999999999875 45 8999975432110 122356777888888775 34433 333 346677789
Q ss_pred EEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||+++. .|.+.+.. .... -.++.+|...|+.+|...
T Consensus 77 v~e~~~~---~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 119 (286)
T cd07832 77 VMEYMPS---DLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG 119 (286)
T ss_pred EecccCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999952 45444432 2211 246778888899898764
No 160
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=95.69 E-value=0.37 Score=39.42 Aligned_cols=105 Identities=11% Similarity=0.036 Sum_probs=68.2
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.++.+|.|....||++.+. .+ .++||.-..... .-...+...|.+.|+.+.. |.. .+++ +.+.+...
T Consensus 10 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~i-v~~~~~~~~~~~~~ 80 (309)
T cd07872 10 KLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE------EGAPCTAIREVSLLKDLKH--ANI-VTLHDIVHTDKSLT 80 (309)
T ss_pred EEEEecccCCEEEEEEEecCCCCeEEEEEeecccc------CCcchhHHHHHHHHHhCCC--CCc-ceEEEEEeeCCeEE
Confidence 5678999999999999876 33 688897542211 1122356678888877643 332 2333 23567788
Q ss_pred EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ . .+.+.+.+. ... ..++.+|...|+.+|...
T Consensus 81 lv~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ 124 (309)
T cd07872 81 LVFEYLD-K--DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK 124 (309)
T ss_pred EEEeCCC-C--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 2 455555442 221 246778899999999754
No 161
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=95.68 E-value=0.23 Score=39.79 Aligned_cols=107 Identities=16% Similarity=0.034 Sum_probs=65.5
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
.+..+|.|....||++.+. ++ .++||.... .+..-...+...|...++.... |..++-. ++.+.....+
T Consensus 8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~------~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~l 79 (277)
T cd06641 8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL------EEAEDEIEDIQQEITVLSQCDS--PYVTKYYGSYLKDTKLWI 79 (277)
T ss_pred hheeEeecCCeEEEEEEECCCCcEEEEEEecc------ccchHHHHHHHHHHHHHHhcCC--CCEeEEEEEEEeCCeEEE
Confidence 4567899999999999765 44 788896531 1111122445556666665532 4333332 2335567889
Q ss_pred EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
||||++ ...+.+.+..+.... .++.++...|..+|...
T Consensus 80 v~e~~~--~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (277)
T cd06641 80 IMEYLG--GGSALDLLEPGPLDETQIATILREILKGLDYLHSEK 121 (277)
T ss_pred EEEeCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCC
Confidence 999998 346666666655433 35566667777777543
No 162
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=95.67 E-value=0.14 Score=43.34 Aligned_cols=106 Identities=10% Similarity=0.074 Sum_probs=68.5
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCC-----
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRT----- 108 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~----- 108 (165)
.+.+|.|....||++.+. +| .++||.-..... -.....|...|.++|+.+.. |..+.-.-.+ +++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~ 77 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-----NLVSCKRVFRELKMLCFFKH--DNVLSALDILQPPHIDPFE 77 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEecccccc-----chHHHHHHHHHHHHHHhCCC--CCcCCHhheecCCCccccc
Confidence 467899999999999875 45 899997542211 12344678889998887753 3332222122 222
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
...+||||++. .|.+.+..+... -.++.+|...|..+|...
T Consensus 78 ~~~lv~e~~~~---~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ 123 (372)
T cd07853 78 EIYVVTELMQS---DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG 123 (372)
T ss_pred eEEEEeecccc---CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 45789999972 466666555432 246778889999999764
No 163
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=95.66 E-value=0.36 Score=39.24 Aligned_cols=105 Identities=13% Similarity=0.068 Sum_probs=69.3
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~ 111 (165)
.++.+|.|....||++.+. ++ .+++|+...... .-...+...|...|+.+.. |. +.+++. .++....
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~n-I~~~~~~~~~~~~~~ 80 (301)
T cd07873 10 KLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE------EGAPCTAIREVSLLKDLKH--AN-IVTLHDIIHTEKSLT 80 (301)
T ss_pred EeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc------cCchhHHHHHHHHHHhcCC--CC-cceEEEEEecCCeEE
Confidence 5678999999999999876 34 788997642221 1123456678888877643 33 333333 3556678
Q ss_pred EEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ . .+++.+.+.. .. -.++.+|...|+.+|...
T Consensus 81 lv~e~~~-~--~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ 124 (301)
T cd07873 81 LVFEYLD-K--DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK 124 (301)
T ss_pred EEEeccc-c--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 2 5666665432 21 246778888999888754
No 164
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=95.65 E-value=0.2 Score=40.21 Aligned_cols=106 Identities=13% Similarity=0.101 Sum_probs=68.6
Q ss_pred eeEecCCCceeEEEEEEeCC------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 048614 36 TIKEVGDGNLNFVYIVVGSS------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D 106 (165)
-++.+|.|....||++.... + .+++|........ ........|..+|+.+.. | ++.+++ .++
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~------~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~ 80 (277)
T cd05036 10 LLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE------QDESDFLMEALIMSKFNH--Q-NIVRLIGVSFE 80 (277)
T ss_pred eeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH------HHHHHHHHHHHHHHhCCC--C-CEeeEEEEEcc
Confidence 45789999999999998753 2 6888866532211 112345567777766643 4 334444 556
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC-------C-----HHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGIK-------Y-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~-------~-----~~~a~~iG~~La~~h~~t 152 (165)
.+...++||++. ..+|++.+..... . -.++.+|...|+.+|...
T Consensus 81 ~~~~~lv~e~~~--g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 136 (277)
T cd05036 81 RLPRFILLELMA--GGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH 136 (277)
T ss_pred CCCcEEEEecCC--CCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 677899999997 3577776654321 1 146778888888888653
No 165
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=95.64 E-value=0.25 Score=40.36 Aligned_cols=107 Identities=20% Similarity=0.141 Sum_probs=70.2
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~ 112 (165)
.+.+|.|....||++...+ + .+++|.-..-.- .. .-...+...|.+.|+.+. .| .+++++.+ +.....+
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~--~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~~~~~~l 78 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEM--IK--RNKVKRVLTEQEILATLD--HP-FLPTLYASFQTETYLCL 78 (316)
T ss_pred eeeecCCccEEEEEEEEcCCCcEEEEEEEecccc--ch--HHHHHHHHHHHHHHHhCC--CC-CchhheeeeecCCEEEE
Confidence 4678999999999998864 4 899998653210 00 113456777888887776 24 34444433 4556789
Q ss_pred EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||++. ...|.+.+... ..+ -.++.+|...|+-+|...
T Consensus 79 v~e~~~--~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 123 (316)
T cd05574 79 VMDYCP--GGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG 123 (316)
T ss_pred EEEecC--CCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 34676666542 222 235678889999998764
No 166
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=95.63 E-value=0.22 Score=39.28 Aligned_cols=104 Identities=20% Similarity=0.007 Sum_probs=67.9
Q ss_pred ecCCCceeEEEEEEeC--C---CeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEE
Q 048614 39 EVGDGNLNFVYIVVGS--S---GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIG 113 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~--~---gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~v 113 (165)
.+|.|....||++... + ..+++|.-..... .-..++...|...|+.+.. |..++-.-.+..+...++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~v 73 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI------AAGKKEFLREASVMAQLDH--PCIVRLIGVCKGEPLMLV 73 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccc------hHHHHHHHHHHHHHHhcCC--CCeeeEEEEEcCCceEEE
Confidence 5788888999987543 2 2688887553221 1123456677777776643 444443334455667899
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|.+.+..+... -.++.++...|+.+|...
T Consensus 74 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ 115 (257)
T cd05060 74 MELAP--LGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKH 115 (257)
T ss_pred EEeCC--CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 99997 34788888665422 357788888899888765
No 167
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=95.61 E-value=0.23 Score=42.27 Aligned_cols=112 Identities=14% Similarity=0.051 Sum_probs=69.6
Q ss_pred Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCC
Q 048614 33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRT 108 (165)
Q Consensus 33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~ 108 (165)
+++ .++.+|.|....||++... +| .+++|+-...-... .........|.++|+.... |..++-...+ +..
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~il~~~~h--~~iv~~~~~~~~~~ 116 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK----RSDSAFFWEERDIMAHANS--EWIVQLHYAFQDDK 116 (370)
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhhHHHHHHHHHHHHhCCC--CCcceEEEEEecCC
Confidence 344 5667999999999999876 34 78889864221100 1122344567777776542 4444444333 445
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
...+||||++ ...|.+.+..+.... .++.+|...|+-+|...
T Consensus 117 ~~~lv~Ey~~--gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ 162 (370)
T cd05596 117 YLYMVMEYMP--GGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMG 162 (370)
T ss_pred EEEEEEcCCC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5679999997 346766665544322 35667888888888653
No 168
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=95.60 E-value=0.28 Score=39.02 Aligned_cols=106 Identities=20% Similarity=0.142 Sum_probs=69.1
Q ss_pred eEecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCce
Q 048614 37 IKEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSL 111 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~ 111 (165)
.+.+|.|....||++...+ . .++||....... .-..++...|...|+.+.. |..++-.-.+..+...
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~------~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~ 82 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS------PSVREKFLQEAYIMRQFDH--PHIVKLIGVITENPVW 82 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC------HHHHHHHHHHHHHHHhCCC--CchhceeEEEcCCCcE
Confidence 3578888888999987532 2 688887653331 1123456667777776643 5544443334456677
Q ss_pred EEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t 152 (165)
++||+++ +..|++.+.... .. -.++.++...|+-+|...
T Consensus 83 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 127 (270)
T cd05056 83 IVMELAP--LGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR 127 (270)
T ss_pred EEEEcCC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 458888886533 11 246788899999999764
No 169
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=95.60 E-value=0.22 Score=39.88 Aligned_cols=105 Identities=19% Similarity=0.071 Sum_probs=67.6
Q ss_pred eeEecCCCceeEEEEEEe-----CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----
Q 048614 36 TIKEVGDGNLNFVYIVVG-----SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF---- 105 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---- 105 (165)
-++.+|.|+...||++.. ..+ .++||.-..... -...+...|.++|+.+.. |. +++++.+
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~-iv~~~~~~~~~ 77 (284)
T cd05081 8 FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA-------EHLRDFEREIEILKSLQH--DN-IVKYKGVCYSA 77 (284)
T ss_pred eeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH-------HHHHHHHHHHHHHHhCCC--CC-eeEEEEEEccC
Confidence 467899999999999863 234 788887442211 112456678877776642 43 3444332
Q ss_pred cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614 106 DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 D~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
+.....+||||++ ..+|++.+.+.. .. -.++.++...|+.+|...
T Consensus 78 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~ 128 (284)
T cd05081 78 GRRNLRLVMEYLP--YGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR 128 (284)
T ss_pred CCCceEEEEEecC--CCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 2345679999997 457777775432 22 246778888999998764
No 170
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=95.59 E-value=0.17 Score=41.57 Aligned_cols=107 Identities=14% Similarity=0.019 Sum_probs=70.1
Q ss_pred eeEecCCCceeEEEEEEeC-CC-----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM 109 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~ 109 (165)
.+..+|.|....||++... +| .+.||...+. ...-...+...|..+|+.+.. |..++-.-.+..+.
T Consensus 11 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~~~e~~~l~~l~h--~niv~~~g~~~~~~ 82 (316)
T cd05108 11 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA------TSPKANKEILDEAYVMASVDN--PHVCRLLGICLTST 82 (316)
T ss_pred eeeeeecCCCceEEEEEEecCCCccceeEEEEecccc------CCHHHHHHHHHHHHHHHhCCC--CCCCeEEEEEcCCC
Confidence 6788999999999999753 33 2667765421 112234567778877776632 44444333445567
Q ss_pred ceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 048614 110 SLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t 152 (165)
..++||+++ ...|.+.+.+... . -.++.+|...|+-+|...
T Consensus 83 ~~~v~e~~~--~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 129 (316)
T cd05108 83 VQLITQLMP--FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR 129 (316)
T ss_pred ceeeeecCC--CCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 789999997 3467777766432 1 257789999999999754
No 171
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=95.59 E-value=0.19 Score=42.44 Aligned_cols=111 Identities=14% Similarity=0.084 Sum_probs=71.1
Q ss_pred cc-eeEecCCCceeEEEEEEeC--CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC
Q 048614 34 AL-TIKEVGDGNLNFVYIVVGS--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRT 108 (165)
Q Consensus 34 ~~-~v~~l~~Gn~N~v~rv~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~ 108 (165)
++ -++.+|.|....||++... ++ .++||.-.... .. -.-..++...|.++|+.+.. |..++-. ++.+..
T Consensus 31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~-~~---~~~~~~~~~~E~~~l~~l~h--p~Iv~~~~~~~~~~ 104 (340)
T PTZ00426 31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSK-II---KQKQVDHVFSERKILNYINH--PFCVNLYGSFKDES 104 (340)
T ss_pred hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHH-hh---hhhhHHHHHHHHHHHHhCCC--CCCcceEEEEEeCC
Confidence 44 5788999999999999754 22 68888643211 00 01234566778888877642 4433322 233555
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
...+||||++ ...|.+.+..+...+ .++.+|...|.-+|...
T Consensus 105 ~~~lv~Ey~~--~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 151 (340)
T PTZ00426 105 YLYLVLEFVI--GGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLN 151 (340)
T ss_pred EEEEEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 6789999997 347777776655432 35678888888888754
No 172
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=95.59 E-value=0.15 Score=41.17 Aligned_cols=109 Identities=17% Similarity=0.030 Sum_probs=70.0
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~~~~~v 113 (165)
++.+|.|....||++.+. +| .++||.-...... .+...-..+...|.+.|+.+. .|..++-.. +.+.....+|
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERK--EAKDGINFTALREIKLLQELK--HPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred eeeeeeccccEEEEEEECCCCcEEEEEEEeccccc--cccchhhHHHHHHHHHHhhcC--CCCChhhhheeecCCEEEEE
Confidence 356899999999999875 45 8999987643321 111222344556777777665 354444332 3344567899
Q ss_pred EecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ..|++.+.... .. -.++.+|...|+.+|...
T Consensus 81 ~e~~~---~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 122 (298)
T cd07841 81 FEFME---TDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW 122 (298)
T ss_pred EcccC---CCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99994 26777665544 22 257788899999998765
No 173
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=95.58 E-value=0.11 Score=40.60 Aligned_cols=106 Identities=17% Similarity=0.071 Sum_probs=68.2
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~~ 112 (165)
.+.++.|....||++... ++ .+++|.-.... .+.....+...|.+.|+.+. .|. ++++ ++.+.....+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~~e~~~l~~l~--~~~-i~~~~~~~~~~~~~~~ 76 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGS-----MSQKEREDAVNEIRILASVN--HPN-IISYKEAFLDGNKLCI 76 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhh-----ccHHHHHHHHHHHHHHHhCC--CCC-chhhhhhhccCCEEEE
Confidence 567888888899999765 44 78888654221 12233456667777777665 233 3333 4456688899
Q ss_pred EEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ...|++.+.+ +... -.++.++...|+.+|...
T Consensus 77 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~ 123 (256)
T cd08530 77 VMEYAP--FGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK 123 (256)
T ss_pred EehhcC--CCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 999997 3456665544 2222 256678888888888664
No 174
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=95.58 E-value=0.11 Score=40.74 Aligned_cols=106 Identities=18% Similarity=0.087 Sum_probs=71.2
Q ss_pred eEecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~ 112 (165)
++.||.|---.||++.+.+. .+++|.-...-... ........|...++.+. . |.. ++++ ..+.....+
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-----~~~~~~~~e~~~~~~l~-~-~~i-~~~~~~~~~~~~~~~ 75 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-----EEREENIREIKILRRLR-H-PNI-VQILDVFQDDNYLYI 75 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-----HHHHHHHHHHHHHHHHT-B-TTB-CHEEEEEEESSEEEE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-----cccchhhhhhhcccccc-c-ccc-ccccccccccccccc
Confidence 56788888889999998844 79999887554321 11112234888888773 2 333 3333 335677889
Q ss_pred EEecCCCCchHHHHHHH-cCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLI-AGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~-~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
+||++. ...|.+.+. .+... -.++.+|...|+.+|...
T Consensus 76 v~~~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~ 118 (260)
T PF00069_consen 76 VMEYCP--GGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKG 118 (260)
T ss_dssp EEEEET--TEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccc--ccccccccccccccccccccccccccccccccccccc
Confidence 999998 347777776 34332 367888899999999863
No 175
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=95.58 E-value=0.16 Score=40.96 Aligned_cols=105 Identities=17% Similarity=0.086 Sum_probs=66.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
.++.+|.|..+.||++... +| .+++|....... +-...+...|.++|+.+.. |..++-. ++.+.....+
T Consensus 9 ~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~l 80 (284)
T cd06620 9 TISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK------SSVRKQILRELQIMHECRS--PYIVSFYGAFLNENNICM 80 (284)
T ss_pred HHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc------chHHHHHHHHHHHHHHcCC--CCcceEeeeEecCCEEEE
Confidence 3567889999999999876 34 677776442111 1224567778888876642 4433332 4456677899
Q ss_pred EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHh
Q 048614 113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~ 150 (165)
||||++ ...|...+..... . -.++.++...|..+|.
T Consensus 81 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 121 (284)
T cd06620 81 CMEFMD--CGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYN 121 (284)
T ss_pred EEecCC--CCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999998 3466666655332 2 2456677777777874
No 176
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=95.58 E-value=0.21 Score=42.69 Aligned_cols=113 Identities=14% Similarity=0.053 Sum_probs=69.6
Q ss_pred CCcc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cC
Q 048614 32 FDAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DR 107 (165)
Q Consensus 32 ~~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~ 107 (165)
.+++ .++.+|.|....||++.... + .+++|.....-... .-...+...|..+|+.... |..++-...+ +.
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~----~~~~~~~~~e~~i~~~~~h--p~iv~~~~~~~~~ 115 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK----RSDSAFFWEERDIMAFANS--PWVVQLFYAFQDD 115 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhh----hHHHHHHHHHHHHHHhCCC--CCCCeEEEEEEcC
Confidence 3455 67789999999999998863 3 68888754221110 0112344566666665432 4444433333 45
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
....+||||++ +..|...+..+.... .++.+|...|..+|...
T Consensus 116 ~~~~lv~Ey~~--gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 162 (371)
T cd05622 116 RYLYMVMEYMP--GGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 162 (371)
T ss_pred CEEEEEEcCCC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 56779999997 346766665544322 35678888898898653
No 177
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=95.58 E-value=0.23 Score=38.76 Aligned_cols=108 Identities=15% Similarity=0.046 Sum_probs=66.1
Q ss_pred EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEE
Q 048614 38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~v 113 (165)
+.+|.|...-||++.+. ++ .+++|....--. .....--..+...|...|+.... | .+++++. .+.....++
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~~~e~~~l~~~~h--~-~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADD--GQTGQEAVKQLEQEIALLSKLQH--P-NIVQYLGTEREEDNLYIF 80 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccc--cccchHHHHHHHHHHHHHHhcCC--C-CchheeeeEecCCeEEEE
Confidence 56788888899999876 45 899997532110 00011123456667777766542 3 3333443 355677899
Q ss_pred EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
|||++ ...|.+.+.+... . -.++.+|...|+.+|...
T Consensus 81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 122 (258)
T cd06632 81 LELVP--GGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN 122 (258)
T ss_pred EEecC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99997 3467666655432 1 246778888888888654
No 178
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=95.58 E-value=0.26 Score=39.28 Aligned_cols=106 Identities=15% Similarity=0.023 Sum_probs=68.4
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
+..+|.|..+-||++.+. ++ .+++|.-.. . .. .-.......|.++++.+. -|..++-. ++.+.....+|
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~--~---~~-~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~v 77 (274)
T cd06609 6 LECIGKGSFGEVYKAIDKRTNQVVAIKVIDL--E---EA-EDEIEDIQQEIQFLSQCR--SPYITKYYGSFLKGSKLWII 77 (274)
T ss_pred hhhhcCCCCeEEEEEEECCCCeEEEEEEeec--c---cc-chHHHHHHHHHHHHHHcC--CCCeeeeeEEEEECCeEEEE
Confidence 356788888999999876 34 788887531 1 11 122345567777787775 24444333 34556677799
Q ss_pred EecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|.+.+..+... -.++.++...|..+|...
T Consensus 78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~ 118 (274)
T cd06609 78 MEYCG--GGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEG 118 (274)
T ss_pred EEeeC--CCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99998 45777777665332 246677777888888764
No 179
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=95.57 E-value=0.36 Score=38.49 Aligned_cols=107 Identities=16% Similarity=0.148 Sum_probs=68.4
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
+..++.|..+.||++.+. +| .+++|.-.... +...-......|..+|+.+.. |..++-+ ++.+.....++
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESE-----DDPVIKKIALREIRMLKQLKH--PNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred eeeecccCCeEEEEEEECCCCcEEEEEEEeecc-----cCccccHHHHHHHHHHHhCCC--CCEeeeeeEEeeCCEEEEE
Confidence 467899999999999886 35 78989643211 111122455678888877643 3333322 23355567899
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||++ ...|...+...... -.++.+|...|+.+|...
T Consensus 79 ~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~ 120 (286)
T cd07847 79 FEYCD--HTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN 120 (286)
T ss_pred EeccC--ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 35676655544322 257788888999999753
No 180
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=95.57 E-value=0.15 Score=42.37 Aligned_cols=84 Identities=17% Similarity=0.061 Sum_probs=51.9
Q ss_pred eEecCCCceeEEEEEEe------CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCC
Q 048614 37 IKEVGDGNLNFVYIVVG------SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRT 108 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~ 108 (165)
.+.+|.|....||++.. ..+ .+.||+-..... .-...+...|.++|+.+... |. +..++. +...
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~n-iv~~~~~~~~~ 83 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT------ASEHKALMSELKILIHIGNH-LN-VVNLLGACTKP 83 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccc------hHHHHHHHHHHHHHHHhccC-cc-eeeEEeEecCC
Confidence 57799999999999963 123 688887542211 11234677788888776432 33 444443 3332
Q ss_pred --CceEEEecCCCCchHHHHHHHc
Q 048614 109 --MSLIGMRYLEPPHIILRKGLIA 130 (165)
Q Consensus 109 --~~~~vMEdL~~~~~~lr~~l~~ 130 (165)
...++|||++ ..+|.+.+..
T Consensus 84 ~~~~~lv~ey~~--~g~L~~~l~~ 105 (338)
T cd05102 84 NGPLMVIVEFCK--YGNLSNFLRA 105 (338)
T ss_pred CCceEEEEecCC--CCcHHHHHHh
Confidence 3568899998 3466666654
No 181
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=95.56 E-value=0.33 Score=39.06 Aligned_cols=105 Identities=15% Similarity=0.089 Sum_probs=68.9
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~ 111 (165)
.+..+|.|....||++.+. ++ .++||.-...... -.......|.++|+.+.. |. +.++ +..+.+...
T Consensus 9 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~------~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~ 79 (291)
T cd07844 9 KLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE------GAPFTAIREASLLKDLKH--AN-IVTLHDIIHTKKTLT 79 (291)
T ss_pred EEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc------CCchhHHHHHHHHhhCCC--cc-eeeEEEEEecCCeEE
Confidence 5678899999999999886 44 7999986543321 112345568888887743 33 2333 345667789
Q ss_pred EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ . .|.+.+.... .. -.++.++...|.-+|...
T Consensus 80 lv~e~~~-~--~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~ 123 (291)
T cd07844 80 LVFEYLD-T--DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR 123 (291)
T ss_pred EEEecCC-C--CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 3 5666665422 22 245667888888888654
No 182
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=95.56 E-value=0.25 Score=39.85 Aligned_cols=104 Identities=15% Similarity=0.085 Sum_probs=63.0
Q ss_pred cCCCceeEEEEEEeC-CC-eEEEeecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEEEe
Q 048614 40 VGDGNLNFVYIVVGS-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRTMSLIGMR 115 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~~~~~vME 115 (165)
+|.|....||++... .| .+.+|.-... ++. .........|.++|+.+.. |..++-...| +.....+|||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-----~~~~~~~~~E~~il~~l~h--p~i~~~~~~~~~~~~~~lv~e 73 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK-----KSGEKMALLEKEILEKVNS--PFIVNLAYAFESKTHLCLVMS 73 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc-----chhhHHHHHHHHHHHhcCC--CcEEEEEEEEecCCeEEEEEe
Confidence 467888889999875 34 7888865421 111 0111233458888877643 5544443343 4455679999
Q ss_pred cCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614 116 YLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
|++ ..+|+..+.... .. -.++.+|...|+-+|...
T Consensus 74 ~~~--g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 115 (277)
T cd05607 74 LMN--GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD 115 (277)
T ss_pred cCC--CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 997 346666554321 11 246678899999999643
No 183
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=95.56 E-value=0.067 Score=45.39 Aligned_cols=107 Identities=20% Similarity=0.198 Sum_probs=70.4
Q ss_pred EecCCCceeEEEEEEeCCC-eEEEeecC-------------ccccc-cCCCC-CCChHHHHHHHHHHHHhhccCCCCCce
Q 048614 38 KEVGDGNLNFVYIVVGSSG-SFVIKQAL-------------PYVRC-IGESW-PMTKERAYFEALALKEHGQLCPDHVPE 101 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~g-svIvKqa~-------------p~~r~-~~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~ 101 (165)
.++|-|-=..||-+.+++| .++||.=+ .|++. ..-+| -++.-=+..|.++|+.+... ...||+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~-G~~VP~ 175 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE-GVKVPK 175 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc-CCCCCC
Confidence 6777888888999999877 89988643 33321 11245 34444456677788777665 568999
Q ss_pred EEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHH
Q 048614 102 VYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTL 149 (165)
Q Consensus 102 v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h 149 (165)
++ |-+.|++|||++. +..|+..=++-+..+.+...|-.+++..-
T Consensus 176 P~--~~nRHaVvMe~ie--G~eL~~~r~~~en~~~il~~il~~~~~~~ 219 (304)
T COG0478 176 PI--AWNRHAVVMEYIE--GVELYRLRLDVENPDEILDKILEEVRKAY 219 (304)
T ss_pred cc--ccccceeeeehcc--cceeecccCcccCHHHHHHHHHHHHHHHH
Confidence 99 8889999999998 34444322233344566666666665543
No 184
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=95.55 E-value=0.44 Score=38.85 Aligned_cols=106 Identities=16% Similarity=0.052 Sum_probs=69.4
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP-EVYHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~~~~~~ 112 (165)
-++.+|.|....||++.+. +| .++||.-..... .-...+...|..+|+.+.. |..+. .-++.+.+...+
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~l 80 (303)
T cd07869 9 KLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE------EGTPFTAIREASLLKGLKH--ANIVLLHDIIHTKETLTL 80 (303)
T ss_pred EeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc------cccchhHHHHHHHHhhCCC--CCcCeEEEEEecCCeEEE
Confidence 5688999999999999986 44 789997542111 1223466778888887643 33322 223456788899
Q ss_pred EEecCCCCchHHHHHHHcC--CCCH----HHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAG--IKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g--~~~~----~~a~~iG~~La~~h~~t 152 (165)
||||++. .+.+.+... ...+ .++.+|...|+-+|...
T Consensus 81 v~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 123 (303)
T cd07869 81 VFEYVHT---DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY 123 (303)
T ss_pred EEECCCc---CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999973 344555442 2222 46678888888888743
No 185
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=95.54 E-value=0.23 Score=39.47 Aligned_cols=105 Identities=15% Similarity=0.095 Sum_probs=69.8
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~ 112 (165)
+..++.|..+.||++.+. +| .+++|+-..... .+-...+...|.++|+.+. .|. +.+++ ..+.....+
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~--~~~-i~~~~~~~~~~~~~~~ 75 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-----SEGIPKTALREIKLLKELN--HPN-IIKLLDVFRHKGDLYL 75 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-----cchhHHHHHHHHHHHHHhc--CCC-cchHHHhhccCCCEEE
Confidence 467888999999999876 44 799997543322 1233457777888888775 233 22233 346677889
Q ss_pred EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
+|||++ . .+.+.+... ... -.++.+|...|+.+|...
T Consensus 76 v~e~~~-~--~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 118 (283)
T cd05118 76 VFEFMD-T--DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG 118 (283)
T ss_pred EEeccC-C--CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 2 555666553 222 247788889999998754
No 186
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=95.54 E-value=0.33 Score=38.55 Aligned_cols=105 Identities=19% Similarity=0.076 Sum_probs=68.6
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~~ 112 (165)
....+|.|....||++...+ + .+++|.... . .........|.++|+.+.. |..++-.-. .+.....+
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~------~--~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~l 79 (263)
T cd05052 10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE------D--TMEVEEFLKEAAVMKEIKH--PNLVQLLGVCTREPPFYI 79 (263)
T ss_pred EeeecCCcccceEEEEEEecCCceEEEEEecC------C--chHHHHHHHHHHHHHhCCC--CChhheEEEEcCCCCcEE
Confidence 44678888888999988653 4 788886431 1 1234567778888887743 554444322 34456679
Q ss_pred EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
+|||++ ...|.+.+.... .. -.++.++...|+.+|...
T Consensus 80 v~e~~~--~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ 124 (263)
T cd05052 80 ITEFMT--YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 124 (263)
T ss_pred EEEeCC--CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 346766665422 12 135788899999999654
No 187
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=95.54 E-value=0.27 Score=39.44 Aligned_cols=105 Identities=13% Similarity=0.027 Sum_probs=66.0
Q ss_pred cCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceEEEec
Q 048614 40 VGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSLIGMRY 116 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~~vMEd 116 (165)
+|.|...-||++.+. +| .+++|.-.... ... .....+...|.++|+.++ .|..++-... -+.+...+||||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~-~~~---~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKR-LKK---RKGEQMALNEKKILEKVS--SRFIVSLAYAFETKDDLCLVMTL 74 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhh-hhh---hhhhHHHHHHHHHHHhCC--CCCEeeeeeEEecCCeEEEEEec
Confidence 467777889999765 45 78888654221 100 012334456888888776 3554444323 355678899999
Q ss_pred CCCCchHHHHHHHcCC--CCH-----HHHHHHHHHHHHHHhcc
Q 048614 117 LEPPHIILRKGLIAGI--KYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 L~~~~~~lr~~l~~g~--~~~-----~~a~~iG~~La~~h~~t 152 (165)
++ ...|++.+.+.. ..+ .++.++...|.-+|...
T Consensus 75 ~~--~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ 115 (277)
T cd05577 75 MN--GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR 115 (277)
T ss_pred CC--CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 97 457877775533 222 35678888888888764
No 188
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=95.53 E-value=0.39 Score=38.86 Aligned_cols=105 Identities=14% Similarity=0.191 Sum_probs=70.5
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
....+|.|....||++.+. ++ .+++|... . .+.-..+....|...++.+.. |. +.+++ +.+.+...
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~--~-----~~~~~~~~~~~e~~~l~~~~h--~~-vv~~~~~~~~~~~~~ 92 (285)
T cd06648 23 NFVKIGEGSTGIVCIATDKSTGRQVAVKKMD--L-----RKQQRRELLFNEVVIMRDYQH--PN-IVEMYSSYLVGDELW 92 (285)
T ss_pred cceEeccCCCeEEEEEEECCCCCEEEEEEEe--c-----cchhHHHHHHHHHHHHHHcCC--CC-hheEEEEEEcCCeEE
Confidence 5779999999999999865 34 79999642 1 111223345556667766542 33 33343 34678889
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
++|||++ ...|++.+..+.... .++.++...|+-+|...
T Consensus 93 ~v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ 135 (285)
T cd06648 93 VVMEFLE--GGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQG 135 (285)
T ss_pred EEEeccC--CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 347888777755332 47788889999998754
No 189
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=95.48 E-value=0.28 Score=39.26 Aligned_cols=106 Identities=16% Similarity=0.117 Sum_probs=68.5
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~ 111 (165)
.+..+|.|....||++.+. +| .++||....... .. -...+...|.+.|+.+.. |.. .++ ++.+.+...
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~--~~~~~~~~E~~~l~~l~h--~~i-~~~~~~~~~~~~~~ 75 (284)
T cd07860 4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE---TE--GVPSTAIREISLLKELNH--PNI-VKLLDVIHTENKLY 75 (284)
T ss_pred eeeeecCCCceEEEEEEECCCCCEEEEEEcccccc---cc--ccchHHHHHHHHHHhcCC--CCC-cchhhhcccCCcEE
Confidence 4677899999999999875 44 788886542221 11 122466778888887753 332 222 234778889
Q ss_pred EEEecCCCCchHHHHHHHc---CCCC----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIA---GIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~---g~~~----~~~a~~iG~~La~~h~~t 152 (165)
++|||++ . .++..+.. +... -.++.++...|+-+|...
T Consensus 76 ~v~e~~~-~--~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (284)
T cd07860 76 LVFEFLH-Q--DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120 (284)
T ss_pred EEeeccc-c--CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999997 2 45555543 2222 256778888899888764
No 190
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=95.47 E-value=0.43 Score=38.50 Aligned_cols=106 Identities=14% Similarity=0.104 Sum_probs=67.5
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
....+|.|....||++.+. +| .+++|....... ..--.++...|.+.|+.+.. |. +++++ +.+.....
T Consensus 6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~ 77 (294)
T PLN00009 6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-----DEGVPSTAIREISLLKEMQH--GN-IVRLQDVVHSEKRLY 77 (294)
T ss_pred EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-----cccchHHHHHHHHHHHhccC--CC-EeeEEEEEecCCeEE
Confidence 4567899999999999876 45 799996432110 01122456678888877743 33 33333 44678889
Q ss_pred EEEecCCCCchHHHHHHHcCCC--C-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIK--Y-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~--~-----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ . .+.+.+..... . -.++.+|...|+-+|...
T Consensus 78 lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 122 (294)
T PLN00009 78 LVFEYLD--L-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR 122 (294)
T ss_pred EEEeccc--c-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 2 45555543221 1 246778888888888654
No 191
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=95.46 E-value=0.57 Score=37.70 Aligned_cols=109 Identities=16% Similarity=0.091 Sum_probs=68.4
Q ss_pred CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--
Q 048614 32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-- 106 (165)
Q Consensus 32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-- 106 (165)
.+++ .+..++.|....||++.+. ++ .+++|.-.+. ....++...|...++.+... | .+++++.+-
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~--------~~~~~~~~~e~~~l~~l~~h-~-ni~~~~~~~~~ 90 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI--------SDVDEEIEAEYNILQSLPNH-P-NVVKFYGMFYK 90 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc--------ccHHHHHHHHHHHHHHhcCC-C-CeEEEEEEEEe
Confidence 4455 5567899999999999885 34 6788865421 11235666777777665332 3 445555432
Q ss_pred -----CCCceEEEecCCCCchHHHHHHH----cCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 107 -----RTMSLIGMRYLEPPHIILRKGLI----AGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 -----~~~~~~vMEdL~~~~~~lr~~l~----~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
.....+||||++ ..+|++.+. .+...+ .++.++...|..+|...
T Consensus 91 ~~~~~~~~~~lv~ey~~--~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 148 (291)
T cd06639 91 ADKLVGGQLWLVLELCN--GGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR 148 (291)
T ss_pred ccccCCCeeEEEEEECC--CCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 134789999997 346665543 233222 36778888888898754
No 192
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=95.45 E-value=0.38 Score=37.36 Aligned_cols=107 Identities=18% Similarity=0.040 Sum_probs=70.7
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
.+.+|.|....||++.+. .+ .+++|....... ..-..++...|.+.|+.+.. |..++-. +..+.....++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v 77 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-----KEEALKSIMQEIDLLKNLKH--PNIVKYIGSIETSDSLYII 77 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-----CHHHHHHHHHHHHHHHhCCC--CCccEEEEEEEeCCEEEEE
Confidence 567889999999999876 34 788887764321 01234567778788777642 4433322 34556677899
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|.+.+...... -.++.++...|+.+|...
T Consensus 78 ~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~ 119 (254)
T cd06627 78 LEYAE--NGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG 119 (254)
T ss_pred EecCC--CCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 99997 35787777653322 246778888888888654
No 193
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=95.43 E-value=0.72 Score=37.63 Aligned_cols=106 Identities=18% Similarity=0.135 Sum_probs=68.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
.++.+|.|....||++.+. +| .++||+-.. ...-..++...|.+.++.... |..++-+ ++.+.+...+
T Consensus 23 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~-------~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~l 93 (296)
T cd06655 23 RYEKIGQGASGTVFTAIDVATGQEVAIKQINL-------QKQPKKELIINEILVMKELKN--PNIVNFLDSFLVGDELFV 93 (296)
T ss_pred EEEEEecCCCeEEEEEEEcCCCcEEEEEEEec-------ccCchHHHHHHHHHHHHhcCC--CceeeeeeeEecCceEEE
Confidence 6678999999999999764 44 899997531 111234566778887776642 4433322 3446678899
Q ss_pred EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...|...+..+.... .++.++...|+.+|...
T Consensus 94 v~e~~~--~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~ 135 (296)
T cd06655 94 VMEYLA--GGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQ 135 (296)
T ss_pred EEEecC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 346766665543322 35566778888888543
No 194
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=95.42 E-value=0.36 Score=39.37 Aligned_cols=106 Identities=18% Similarity=0.149 Sum_probs=69.5
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
.++.+|.|....||++.+. +| .+++|..... . ....++...|..+|+.... |..++-+ ++.+.+...+
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~------~-~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 23 RFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQ------Q-QPKKELIINEILVMRENKN--PNIVNYLDSYLVGDELWV 93 (297)
T ss_pred eeeeeccCCCeEEEEEEECCCCCEEEEEEEecC------c-cchHHHHHHHHHHHHhCCC--CCEeeEEEEEecCCEEEE
Confidence 6678999999999999874 44 8999964311 1 1233566777777766533 4444433 3346677889
Q ss_pred EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
||||++ ...+.+.+.++... ..++.++...|+.+|...
T Consensus 94 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ 135 (297)
T cd06656 94 VMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQ 135 (297)
T ss_pred eecccC--CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 34666666554322 356667888888888653
No 195
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=95.41 E-value=0.24 Score=42.27 Aligned_cols=113 Identities=12% Similarity=-0.001 Sum_probs=70.1
Q ss_pred CCcc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC
Q 048614 32 FDAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDR 107 (165)
Q Consensus 32 ~~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~ 107 (165)
.+++ .+..+|.|....||++.... + .+.+|.....-... .....+...|.++++.... |..++-. .+.+.
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~i~~~~~h--p~iv~~~~~~~~~ 115 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK----RSDSAFFWEERDIMAFANS--PWVVQLFCAFQDD 115 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhhHHHHHHHHHHHHhCCC--CCEeeEEEEEEcC
Confidence 3445 56779999999999999864 4 67888754211100 1122345567777765432 4433332 23466
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
....+||||++ ...|.+.+..+.... .++.+|...|.-+|...
T Consensus 116 ~~~~lv~Ey~~--gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~ 162 (370)
T cd05621 116 KYLYMVMEYMP--GGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG 162 (370)
T ss_pred CEEEEEEcCCC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 67889999997 346766665544322 36678888888888754
No 196
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=95.40 E-value=0.3 Score=39.36 Aligned_cols=107 Identities=11% Similarity=-0.048 Sum_probs=62.6
Q ss_pred cCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEEe
Q 048614 40 VGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGMR 115 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vME 115 (165)
+|.|...-||++.+. +| .+.+|.-..... ...-...+...|...++......-..++..+. .+.+...+|||
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 77 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRI----KMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD 77 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeecccc----ccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEe
Confidence 677888899999875 34 788997653211 01111223445555666555432223333332 25567789999
Q ss_pred cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|++ ...|.+.+...... -.++.++...|+.+|...
T Consensus 78 ~~~--g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ 117 (278)
T cd05606 78 LMN--GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF 117 (278)
T ss_pred cCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 998 34666666544332 246677778888888543
No 197
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=95.40 E-value=0.32 Score=39.70 Aligned_cols=105 Identities=14% Similarity=0.114 Sum_probs=68.8
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
...+|.|....||++... +| .++||... .+. .-...+...|...|+.... |..++-. ++.+.+...++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~--~~~-----~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~lv 95 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMD--LRK-----QQRRELLFNEVVIMRDYQH--ENVVEMYNSYLVGDELWVV 95 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEec--ccc-----hhHHHHHHHHHHHHHhcCC--cchhheeeEEEeCCEEEEE
Confidence 456899999999999775 45 79999642 111 1123455667777776653 3322222 45577889999
Q ss_pred EecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
|||++ ...+++.+..+... -.++.++...|+.+|...
T Consensus 96 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~g 136 (292)
T cd06657 96 MEFLE--GGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQG 136 (292)
T ss_pred EecCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 34677766555432 257778888888888753
No 198
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=95.39 E-value=0.22 Score=39.24 Aligned_cols=104 Identities=16% Similarity=-0.004 Sum_probs=66.8
Q ss_pred eEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~v 113 (165)
.+.+|.|....||++.+.++ .+.+|.....- .....+...|...|+.+.. |. +.+++ ..+.+...++
T Consensus 11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD-------LLKQQDFQKEVQALKRLRH--KH-LISLFAVCSVGEPVYII 80 (261)
T ss_pred hhhhccCCCccEEEeEecCCCcEEEEeccccc-------hhhHHHHHHHHHHHhcCCC--cc-hhheeeeEecCCCeEEE
Confidence 45678888899999998766 78888743211 1123455566666666542 33 33333 3566778899
Q ss_pred EecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||++ ..+|.+.+.+. ... ..++.+|...|..+|...
T Consensus 81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 124 (261)
T cd05148 81 TELME--KGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN 124 (261)
T ss_pred Eeecc--cCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 34677776642 211 346778888888888654
No 199
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=95.39 E-value=0.51 Score=37.46 Aligned_cols=106 Identities=17% Similarity=0.107 Sum_probs=69.3
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC--CCce
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDR--TMSL 111 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~--~~~~ 111 (165)
++.+|.|..+.||++...+ | .+++|.-...... + -.......|.+.|+.+. .|..++-. +..+. ....
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~----~-~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~~ 76 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEK----E-GFPITAIREIKLLQKLR--HPNIVRLKEIVTSKGKGSIY 76 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEeccccc----c-cchHHHHHHHHHHHhcc--CCCeeeheeeEecCCCCcEE
Confidence 5678999999999998774 4 7889987754311 1 11234556888887775 35444433 22233 5789
Q ss_pred EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||||.+ . .+...+... ... -.++.+|...|+.+|...
T Consensus 77 lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ 120 (287)
T cd07840 77 MVFEYMD--H-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG 120 (287)
T ss_pred EEecccc--c-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999997 2 566666543 121 246778888899898764
No 200
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=95.37 E-value=0.37 Score=38.28 Aligned_cols=109 Identities=17% Similarity=0.075 Sum_probs=67.4
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC--Cc
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT--MS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~--~~ 110 (165)
.+.+|.|....||++.+. +| .+++|........ ..-.-...+...|.++|+.+.. |..+ +++.+ |.+ ..
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~~~~ei~~l~~l~h--~~i~-~~~~~~~~~~~~~~ 81 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDS--QETSKEVNALECEIQLLKNLRH--DRIV-QYYGCLRDPEEKKL 81 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCccc--chhhHHHHHHHHHHHHHHHcCC--CCcc-eEEEEEEcCCCCEE
Confidence 567888999999999875 35 7888974321111 1111233466678888887753 4433 33332 333 35
Q ss_pred eEEEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614 111 LIGMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
.++||+++ ...|.+.+..... . -.++.+|...|..+|...
T Consensus 82 ~~v~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~ 126 (264)
T cd06653 82 SIFVEYMP--GGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNM 126 (264)
T ss_pred EEEEEeCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 78999997 3467666655332 2 246678888888888554
No 201
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=95.34 E-value=0.36 Score=37.89 Aligned_cols=106 Identities=20% Similarity=0.143 Sum_probs=70.1
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~ 112 (165)
.+.+|.|....||++.+. ++ .+++|.-... ...+-...+...|.++++.+.. ..+.+++.+ +.+...+
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~-----~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~~~~~~l 76 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQ-----DNDPKTIKEIADEMKVLELLKH---PNLVKYYGVEVHREKVYI 76 (264)
T ss_pred eeEeecCCCcEEEEEEECCCCcEEEEEEEECc-----ccchHHHHHHHHHHHHHHhCCC---CChhheeeeEecCCEEEE
Confidence 467899999999999875 34 7888874311 1112334566677777776643 344455544 4567899
Q ss_pred EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ...|++.+..+... -.++.++...|+.+|...
T Consensus 77 v~e~~~--~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 119 (264)
T cd06626 77 FMEYCS--GGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG 119 (264)
T ss_pred EEecCC--CCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 45777777665322 245677888888888755
No 202
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=95.33 E-value=0.42 Score=37.59 Aligned_cols=105 Identities=17% Similarity=0.132 Sum_probs=68.1
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~ 112 (165)
.+.+|.|...-||++.+. ++ .+++|.-.-.. -.-..++...|...|+.+.. |. +++++ +.+.....+
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~------~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~l 75 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK------SSSAVEDSRKEAVLLAKMKH--PN-IVAFKESFEADGHLYI 75 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc------chHHHHHHHHHHHHHHhCCC--CC-cceEEEEEEECCEEEE
Confidence 577899999999999876 34 78889753111 01234677778888876643 33 33333 346677889
Q ss_pred EEecCCCCchHHHHHHHc--CCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIA--GIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~--g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
+|||++ ...+.+.+.. +...+ .++.+|...|..+|...
T Consensus 76 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 120 (255)
T cd08219 76 VMEYCD--GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR 120 (255)
T ss_pred EEeeCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 999997 3455555543 22222 45788899999888753
No 203
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=95.33 E-value=0.22 Score=39.80 Aligned_cols=106 Identities=18% Similarity=0.148 Sum_probs=66.6
Q ss_pred eeEecCCCceeEEEEEEeCC-------CeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-------GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-------gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D 106 (165)
-.+.+|.|....||++.... ..+++|.-..... .-...+...|...|+.+.. |. +.+++.+ +
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~------~~~~~~~~~ei~~l~~l~h--~~-i~~~~~~~~~ 79 (283)
T cd05048 9 FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE------PKVQQEFRQEAELMSDLQH--PN-IVCLLGVCTK 79 (283)
T ss_pred hhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC------HHHHHHHHHHHHHHHhcCC--cc-cceEEEEEcC
Confidence 35678889889999997642 1577776542211 1112345667777766542 33 3444443 5
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC-----------------C----HHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGIK-----------------Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~-----------------~----~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++ ..+|.+.+..... . -.++.++...|+.+|...
T Consensus 80 ~~~~~~~~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~ 144 (283)
T cd05048 80 EQPTCMLFEYLA--HGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH 144 (283)
T ss_pred CCceEEEEecCC--CCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 566789999997 3467777655321 1 247888999999999654
No 204
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=95.32 E-value=0.43 Score=38.92 Aligned_cols=109 Identities=17% Similarity=0.150 Sum_probs=68.4
Q ss_pred Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614 33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR 107 (165)
Q Consensus 33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~ 107 (165)
+++ .+..+|.|....||++.+. .| .+++|....... ..+... +...|..+|+.+.. |.. .+++.+ +.
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~---~~~~E~~~l~~l~h--~~i-~~~~~~~~~~ 78 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE--RDGIPI---SSLREITLLLNLRH--PNI-VELKEVVVGK 78 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC--CCCCcc---hhhHHHHHHHhCCC--CCC-cceEEEEecC
Confidence 344 5667899999999999886 35 788897542211 112222 34558888877643 333 333332 22
Q ss_pred --CCceEEEecCCCCchHHHHHHHcCC-C-----CHHHHHHHHHHHHHHHhcc
Q 048614 108 --TMSLIGMRYLEPPHIILRKGLIAGI-K-----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 --~~~~~vMEdL~~~~~~lr~~l~~g~-~-----~~~~a~~iG~~La~~h~~t 152 (165)
+...+|||+++. .+...+.... . ...++.+|...|+.+|...
T Consensus 79 ~~~~~~lv~e~~~~---~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 128 (309)
T cd07845 79 HLDSIFLVMEYCEQ---DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF 128 (309)
T ss_pred CCCeEEEEEecCCC---CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 457899999972 4555555422 1 1357888899999999765
No 205
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=95.32 E-value=0.09 Score=41.49 Aligned_cols=104 Identities=18% Similarity=0.085 Sum_probs=67.9
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPE-VYHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~~~~~~v 113 (165)
++.+|.|...-||++.+. ++ .+++|.-.... -.....+...|.+.|+... -|..++- -.+.+.....++
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~------~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~lv 77 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI------NEAIQKQILRELDILHKCN--SPYIVGFYGAFYNNGDISIC 77 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc------ChHHHHHHHHHHHHHHHCC--CCchhhhheeeecCCEEEEE
Confidence 345778888889999887 34 78888644221 0122345667777777665 3443322 134567888999
Q ss_pred EecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHh
Q 048614 114 MRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~ 150 (165)
||+++ ...|++.+... ... ..++.++...|+.+|.
T Consensus 78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~ 118 (265)
T cd06605 78 MEYMD--GGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE 118 (265)
T ss_pred EEecC--CCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 99998 45777777654 222 2477888899999997
No 206
>PHA03212 serine/threonine kinase US3; Provisional
Probab=95.31 E-value=0.36 Score=41.72 Aligned_cols=98 Identities=12% Similarity=0.085 Sum_probs=66.9
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
-++.+|.|....||++.+.. + .+++|... ..+...|+++|+.+.. |..+ +++ +.+.....
T Consensus 96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------------~~~~~~E~~il~~l~H--pnIv-~~~~~~~~~~~~~ 159 (391)
T PHA03212 96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------------RGGTATEAHILRAINH--PSII-QLKGTFTYNKFTC 159 (391)
T ss_pred EEEEEcCCCCeEEEEEEECCCCCEEEEechh-------------hhhhHHHHHHHHhCCC--CCCC-CEeEEEEECCeeE
Confidence 56788999999999998863 3 78888421 1355779999988753 4433 333 23456678
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
++||+++. .|...+...... -.++.+|...|+-+|...
T Consensus 160 lv~e~~~~---~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~ 202 (391)
T PHA03212 160 LILPRYKT---DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENR 202 (391)
T ss_pred EEEecCCC---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999972 455555443322 256788889999999754
No 207
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=95.29 E-value=0.31 Score=37.52 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=68.9
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~ 112 (165)
.+.++.|....||++.+. ++ .+++|.-..... -...+...|.+.|+.+. ...+++++ +.+.....+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~l 74 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-------EKKEKIINEIQILKKCK---HPNIVKYYGSYLKKDELWI 74 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHHHHhCC---CCCEeEEEEEEecCCeEEE
Confidence 467888888899999986 44 788888753221 12356667777777665 23344444 345577889
Q ss_pred EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 048614 113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~ 151 (165)
+||+++ ...|.+.+... ... -.++.++...|+.+|..
T Consensus 75 ~~e~~~--~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~ 117 (253)
T cd05122 75 VMEFCS--GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN 117 (253)
T ss_pred EEecCC--CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC
Confidence 999998 35677766554 221 24677888888888873
No 208
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=95.29 E-value=0.29 Score=40.59 Aligned_cols=106 Identities=13% Similarity=0.088 Sum_probs=62.7
Q ss_pred ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHH-HHHhhccCCCCCceEE-EEcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALA-LKEHGQLCPDHVPEVY-HFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~-L~~~~~~~p~~vP~v~-~~D~~~~~~vM 114 (165)
.+|.|....||++.+. +| .++||.-....... .-...+...|... ++... -|..++-.. +.+.+...+||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~~l~~~~--hp~iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN----RKEQKHIMAERNVLLKNVK--HPFLVGLHYSFQTTEKLYFVL 75 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHHhCC--CCCCccEEEEEecCCEEEEEE
Confidence 5788888999999875 45 78889765332211 0112233344433 22221 144333322 33557788999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ + ..|...+..+... -.++.+|...|+-+|...
T Consensus 76 e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~g 116 (325)
T cd05604 76 DFVN-G-GELFFHLQRERSFPEPRARFYAAEIASALGYLHSIN 116 (325)
T ss_pred cCCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 3 3565666554432 246778899999999754
No 209
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=95.28 E-value=0.38 Score=38.11 Aligned_cols=106 Identities=17% Similarity=0.012 Sum_probs=67.2
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
-++.+|.|....||++.+. ++ .+++|....... -.......|...|+.... |..++-. ++.+.+...+
T Consensus 13 ~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-------~~~~~~~~e~~~l~~~~h--~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 13 LIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-------DDFSLIQQEIFMVKECKH--CNIVAYFGSYLSREKLWI 83 (267)
T ss_pred hhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-------chHHHHHHHHHHHHhcCC--CCeeeeeEEEEeCCEEEE
Confidence 5678898999999999875 44 688887653321 112345567777765532 3333222 2346677789
Q ss_pred EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
||||++ ...|.+.+.++.. . -.++.++...|.-+|...
T Consensus 84 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 126 (267)
T cd06646 84 CMEYCG--GGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKG 126 (267)
T ss_pred EEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 3466666654332 1 246778888888888754
No 210
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=95.26 E-value=0.31 Score=40.41 Aligned_cols=106 Identities=12% Similarity=0.032 Sum_probs=61.9
Q ss_pred cCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhc-cCCCCCceEEE--EcCCCceEEE
Q 048614 40 VGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQ-LCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~-~~p~~vP~v~~--~D~~~~~~vM 114 (165)
+|.|....||++.+. .| .++||......-. . .-...+...|..+++.... -.|. ++.++. .+.....+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~---~~~~~~~~~e~~~l~~~~~~~~p~-i~~~~~~~~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV-A---KKEVAHTIGERNILVRTLLDESPF-IVGLKFSFQTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh-h---hhHHHHHHHHHHHHHHhccCCCCc-CcceEEEEecCCeEEEEE
Confidence 577888889999876 34 7888875321100 0 1122344456555544321 1233 333333 3566789999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ + ..|...+...... ..++.+|...|+.+|...
T Consensus 76 e~~~-~-g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ 116 (330)
T cd05586 76 DYMS-G-GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYD 116 (330)
T ss_pred cCCC-C-ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9997 3 3565656554332 235678888888888654
No 211
>KOG3021 consensus Predicted kinase [General function prediction only]
Probab=95.25 E-value=0.071 Score=44.29 Aligned_cols=88 Identities=18% Similarity=0.119 Sum_probs=57.3
Q ss_pred CCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHH--HHHHHHHhhccCCCCCceEEEE---cCCCceEEEe
Q 048614 41 GDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYF--EALALKEHGQLCPDHVPEVYHF---DRTMSLIGMR 115 (165)
Q Consensus 41 ~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~--E~~~L~~~~~~~p~~vP~v~~~---D~~~~~~vME 115 (165)
|||-+|.-=.-+++.|+|.||.-+.. .|..+ |.+.|.++.+.--..||+.+-. ---.+.+|||
T Consensus 21 gggcI~~~r~ydtDaG~~FvK~nr~~------------~~~mfeGE~~sLeAi~sT~tv~vprpikvid~p~Ggs~lime 88 (313)
T KOG3021|consen 21 GGGCISDGRHYDTDAGKVFVKVNRSI------------ARDMFEGELASLEAIQSTETVLVPRPIKVIDLPGGGSSLIME 88 (313)
T ss_pred CCceeccccccccCCccEEEEecccc------------chHHHhhHHHHHHHHHhcCceecCCceeeEecCCCceeeeee
Confidence 45555543233344569999876641 24444 4556777777544566665433 2357899999
Q ss_pred cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
++. +..+|. -++.+|+.||.+|...
T Consensus 89 ~id--f~~lr~----------~~a~lG~qlAdmHl~n 113 (313)
T KOG3021|consen 89 HID--FQGLRS----------DAAKLGSQLADMHLKN 113 (313)
T ss_pred hhh--cccchh----------HHHHHHHHHHHHhhhh
Confidence 996 766665 4788999999999665
No 212
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=95.25 E-value=0.18 Score=40.21 Aligned_cols=103 Identities=16% Similarity=0.037 Sum_probs=62.8
Q ss_pred ecCCCceeEEEEEEeCC---C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614 39 EVGDGNLNFVYIVVGSS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~ 112 (165)
++|.|....||++...+ + .+++|....-.. .-.......|..+|+.+.. |. +++++. .+.....+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~l 72 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS------VQEQMKFLEEAQPYRSLQH--SN-LLQCLGQCTEVTPYLL 72 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCC------hHHHHHHHHHHHHHHhCCC--CC-EeeEEEEEcCCCCcEE
Confidence 57888888899997542 2 578885432110 1112345557777776643 44 344443 35566789
Q ss_pred EEecCCCCchHHHHHHHcCCC------C----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIK------Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~------~----~~~a~~iG~~La~~h~~t 152 (165)
||||++ ...|++.+..... . -.++.++...|+.+|...
T Consensus 73 v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 120 (269)
T cd05087 73 VMEFCP--LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN 120 (269)
T ss_pred EEECCC--CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 3467776654221 1 146778888888888554
No 213
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=95.23 E-value=0.16 Score=42.11 Aligned_cols=107 Identities=16% Similarity=0.019 Sum_probs=67.1
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
-+..+|.|....||++.+. +| .++||......... .-...+...|..+|+... ..++++++ +.+.+...
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~i~~~~~---~~~i~~~~~~~~~~~~~~ 77 (330)
T cd05601 5 VKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA----QETVSFFEEERDILSISN---SPWIPQLQYAFQDKDNLY 77 (330)
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhCC---CCCCcceeeEEecCCeEE
Confidence 3577899999999999876 44 78888765322110 112344556666665542 23444443 33556678
Q ss_pred EEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 048614 112 IGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~ 151 (165)
+||||++ ...|.+.+.+. ... ..++.+|...|..+|..
T Consensus 78 lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 121 (330)
T cd05601 78 LVMEYQP--GGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM 121 (330)
T ss_pred EEECCCC--CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9999997 34676666553 222 23567888888888864
No 214
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=95.22 E-value=0.26 Score=41.88 Aligned_cols=108 Identities=15% Similarity=0.045 Sum_probs=67.9
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.++.||.|....||++.+. ++ .+.||.-....-. ..-...+...|.++|+.... |. +++++ +.+.+...
T Consensus 5 ~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~~E~~il~~~~h--~~-iv~~~~~~~~~~~~~ 77 (382)
T cd05625 5 KIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL----LRNQVAHVKAERDILAEADN--EW-VVRLYYSFQDKDNLY 77 (382)
T ss_pred EEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh----hHHHHHHHHHHHHHHHhCCC--Cc-CCeEEEEEEeCCEEE
Confidence 5788999999999999875 34 6888865421100 01123456678778776643 33 33333 34566789
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
+||||++ + ..|.+.+.+.... . .++.+|...|.-+|...
T Consensus 78 lv~E~~~-g-g~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ 121 (382)
T cd05625 78 FVMDYIP-G-GDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG 121 (382)
T ss_pred EEEeCCC-C-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 3 3566666554333 2 34567778888888754
No 215
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=95.19 E-value=0.2 Score=41.56 Aligned_cols=105 Identities=15% Similarity=0.162 Sum_probs=68.4
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE------cCC
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF------DRT 108 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~------D~~ 108 (165)
.+.+|.|....||++.+. +| .+++|.-.... +-.-...+...|..+|+.+.. |. +++++.+ +..
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~-----~~~~~~~~~~~e~~~l~~l~h--~~-iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF-----DVPTLAKRTLRELKILRHFKH--DN-IIAIRDILRPPGADFK 81 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEecccc-----ccccchHHHHHHHHHHHhcCC--CC-ccCHHHhccccCCCCc
Confidence 467899999999999876 34 78888643211 111234566778888887762 33 3332221 334
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
...+||||++ + .+.+.+..+... -.++.+|...|+.+|...
T Consensus 82 ~~~lv~e~~~-~--~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 127 (334)
T cd07855 82 DVYVVMDLME-S--DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSAN 127 (334)
T ss_pred eEEEEEehhh-h--hHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5679999997 2 577777655432 256778888999999765
No 216
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=95.19 E-value=0.32 Score=40.79 Aligned_cols=106 Identities=17% Similarity=0.213 Sum_probs=66.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecC-ccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC-----
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQAL-PYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR----- 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~-p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~----- 107 (165)
.++.+|.|....||++.+. .| .++||... ++.. .-...+...|..+|+.+.. |..++-+-.|-.
T Consensus 20 ~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 20 NLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN------VTHAKRAYRELVLMKLVNH--KNIIGLLNVFTPQKSLE 91 (353)
T ss_pred EEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC------hhHHHHHHHHHHHHHhcCC--CCCcceeeeeccCCCcc
Confidence 5788999999999999876 44 89999653 1111 1123466678888877643 333332222211
Q ss_pred --CCceEEEecCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHhcc
Q 048614 108 --TMSLIGMRYLEPPHIILRKGLIAGI---KYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 --~~~~~vMEdL~~~~~~lr~~l~~g~---~~~~~a~~iG~~La~~h~~t 152 (165)
....+|||+++. .+.+.+...- ....++.+|...|+.+|...
T Consensus 92 ~~~~~~lv~e~~~~---~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g 138 (353)
T cd07850 92 EFQDVYLVMELMDA---NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAG 138 (353)
T ss_pred ccCcEEEEEeccCC---CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 235899999973 4555544321 12346888999999999754
No 217
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=95.17 E-value=0.62 Score=36.75 Aligned_cols=110 Identities=15% Similarity=0.057 Sum_probs=65.9
Q ss_pred EecCCCceeEEEEEEeCC-C-eEEEeecCccccccCC-CC-CCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614 38 KEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGE-SW-PMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~-~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~ 111 (165)
..+|.|..+-||++.+.. + .+++|.-......... .+ .--.++...|...|+.+.. | .+++++. .+.+...
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~ 82 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH--E-NIVQYLGSSLDADHLN 82 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC--C-CeeeEEEEEEeCCccE
Confidence 467888889999998753 4 7888865422211000 00 0011345566666766532 3 3444443 3667888
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
++||+++ ...|...+...... -.++.++...|..+|...
T Consensus 83 lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ 126 (267)
T cd06628 83 IFLEYVP--GGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRG 126 (267)
T ss_pred EEEEecC--CCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999997 34676666553322 156778888888888543
No 218
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=95.16 E-value=0.56 Score=35.54 Aligned_cols=105 Identities=19% Similarity=0.080 Sum_probs=69.3
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
.+.++.|...-||++...+ + .+++|....... + -...+...|.+.++.+.. |..++-+ +..+.....++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~-~~~~~~~~e~~~~~~~~~--~~i~~~~~~~~~~~~~~~v 75 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKT-----E-KQREEFLREIRILKKLKH--PNIVKLYGVFEDPEPLYLV 75 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccc-----h-HHHHHHHHHHHHHHhCCC--CChhhheeeeecCCceEEE
Confidence 4678888888999999875 4 899998663221 1 134677778888877732 4333322 22344778899
Q ss_pred EecCCCCchHHHHHHHcCCC------CHHHHHHHHHHHHHHHhc
Q 048614 114 MRYLEPPHIILRKGLIAGIK------YPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~------~~~~a~~iG~~La~~h~~ 151 (165)
||+++ ...|.+.+..... .-.++.++...++.+|..
T Consensus 76 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 117 (225)
T smart00221 76 MEYCE--GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL 117 (225)
T ss_pred EeccC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99998 3477776655332 135677788888888876
No 219
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=95.16 E-value=0.32 Score=38.94 Aligned_cols=106 Identities=14% Similarity=0.058 Sum_probs=65.0
Q ss_pred eeEecCCCceeEEEEEEeC-CC-e----EEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCC
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-S----FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-s----vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~ 108 (165)
.++.+|.|....||++... +| . +.||....... .-...+...|...++.+. ..+++.++. +...
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~ 81 (279)
T cd05109 11 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS------PKANKEILDEAYVMAGVG---SPYVCRLLGICLTS 81 (279)
T ss_pred eeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC------HHHHHHHHHHHHHHHhcC---CCCCceEEEEEcCC
Confidence 6788999999999999753 34 2 56666542221 111234455555555443 234444443 3345
Q ss_pred CceEEEecCCCCchHHHHHHHcCCC-C-----HHHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIK-Y-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~-~-----~~~a~~iG~~La~~h~~t 152 (165)
...++||+++ ...+.+.+..+.. . -.++.+|...|+.+|...
T Consensus 82 ~~~l~~~~~~--~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 129 (279)
T cd05109 82 TVQLVTQLMP--YGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR 129 (279)
T ss_pred CcEEEEEcCC--CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 6678999997 3467777765432 1 257888999999999765
No 220
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=95.16 E-value=0.23 Score=41.14 Aligned_cols=105 Identities=13% Similarity=0.104 Sum_probs=63.4
Q ss_pred ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHH-HHhhccCCCCCceEE--EEcCCCceEE
Q 048614 39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALAL-KEHGQLCPDHVPEVY--HFDRTMSLIG 113 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L-~~~~~~~p~~vP~v~--~~D~~~~~~v 113 (165)
.+|.|....||++.+. +| .++||.-...... ..-...+...|...+ +... -| ++++++ +.+.+...+|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~~~~~l~--hp-~iv~~~~~~~~~~~~~lv 74 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAIL----KKKEQKHIMAERNVLLKNVK--HP-FLVGLHYSFQTADKLYFV 74 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhHHHHHHHHHHHHHhhCC--CC-CCCCeeEEEEeCCEEEEE
Confidence 5788888999999886 44 7999975432110 111223344444432 2221 13 334443 2356778899
Q ss_pred EecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
|||++ ...|...+......+ .++.+|...|.-+|...
T Consensus 75 ~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~g 116 (323)
T cd05575 75 LDYVN--GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLN 116 (323)
T ss_pred EcCCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 346766666554332 36778889999999753
No 221
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=95.15 E-value=0.25 Score=48.01 Aligned_cols=109 Identities=18% Similarity=0.183 Sum_probs=71.4
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~~ 112 (165)
.++.+|.|....||++.+.. | .++||.-..... +.+....|...|.++++.+.. |..++-.-. .+.+...+
T Consensus 6 Ii~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~----~~e~~~~rflrEi~ILs~L~H--PNIVkl~~v~~d~~~lyL 79 (932)
T PRK13184 6 IIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS----ENPLLKKRFLREAKIAADLIH--PGIVPVYSICSDGDPVYY 79 (932)
T ss_pred EEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc----cCHHHHHHHHHHHHHHHhCCC--cCcCeEEEEEeeCCEEEE
Confidence 45788999999999998763 4 799998653221 122334577788888876642 444443322 35566789
Q ss_pred EEecCCCCchHHHHHHHcC----C--------C----CHHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAG----I--------K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g----~--------~----~~~~a~~iG~~La~~h~~t 152 (165)
+|||++ +.+|++.+... . . .-.++.+|...|+.+|...
T Consensus 80 VMEY~e--GGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G 133 (932)
T PRK13184 80 TMPYIE--GYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG 133 (932)
T ss_pred EEEcCC--CCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 34676665431 0 0 1246779999999999754
No 222
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=95.15 E-value=0.23 Score=41.72 Aligned_cols=107 Identities=16% Similarity=0.154 Sum_probs=65.5
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR------ 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------ 107 (165)
.++.+|.|....||++.+. .| .++||.-..-... .-...+...|..+|+.+.. |..++-.-.|..
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 25 QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN-----QTHAKRAYRELVLLKCVNH--KNIISLLNVFTPQKSLEE 97 (359)
T ss_pred EEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc-----hhHHHHHHHHHHHHHhCCC--CCEeeeeeeeccCCCccc
Confidence 5688999999999999876 34 7999975421110 1223566778777776642 333222222222
Q ss_pred -CCceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcc
Q 048614 108 -TMSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 -~~~~~vMEdL~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~t 152 (165)
....+|||+++. .+.+.+...-. ...++.+|...|+-+|...
T Consensus 98 ~~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 143 (359)
T cd07876 98 FQDVYLVMELMDA---NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG 143 (359)
T ss_pred cceeEEEEeCCCc---CHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 235799999983 34444432211 2347788999999999764
No 223
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=95.13 E-value=0.69 Score=37.48 Aligned_cols=107 Identities=16% Similarity=0.040 Sum_probs=66.8
Q ss_pred eEecCCCceeEEEEEEeCC---C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcC--CC
Q 048614 37 IKEVGDGNLNFVYIVVGSS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDR--TM 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~--~~ 109 (165)
+..+|.|....||++.+.. + .++||.-..... .+.--.++...|..+|+.+.. |..++-.-. .|. ..
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~----~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~ 78 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE----QYTGISQSACREIALLRELKH--ENVVSLVEVFLEHADKS 78 (316)
T ss_pred EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc----cccCccHHHHHHHHHHHhcCC--CCccceEEEEeCCCCce
Confidence 4568899999999999854 3 799998765331 122233567778888877653 443332222 333 45
Q ss_pred ceEEEecCCCCchHHHHHHHcC------CCC----HHHHHHHHHHHHHHHhcc
Q 048614 110 SLIGMRYLEPPHIILRKGLIAG------IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g------~~~----~~~a~~iG~~La~~h~~t 152 (165)
..+|||+++. .+.+.+... ... ..++.+|...|..+|...
T Consensus 79 ~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 128 (316)
T cd07842 79 VYLLFDYAEH---DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW 128 (316)
T ss_pred EEEEEeCCCc---CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 7899999973 333433221 111 246778889999888654
No 224
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=95.13 E-value=0.074 Score=44.72 Aligned_cols=106 Identities=15% Similarity=0.147 Sum_probs=66.3
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.++.+|.|....||++.+. +| .++||.-..... .....+...|.++|+.+.. |. +.+++ +.+.....
T Consensus 78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~ 148 (353)
T PLN00034 78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE------DTVRRQICREIEILRDVNH--PN-VVKCHDMFDHNGEIQ 148 (353)
T ss_pred hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc------HHHHHHHHHHHHHHHhCCC--CC-cceeeeEeccCCeEE
Confidence 4567999999999999875 44 799997532211 1123466778888877642 33 33333 33445667
Q ss_pred EEEecCCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGI-KYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~-~~~~~a~~iG~~La~~h~~t 152 (165)
+||||+. .. .|+....... ....++.+|...|..+|...
T Consensus 149 lv~e~~~-~~-~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 188 (353)
T PLN00034 149 VLLEFMD-GG-SLEGTHIADEQFLADVARQILSGIAYLHRRH 188 (353)
T ss_pred EEEecCC-CC-cccccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 8999997 33 3433211111 12358889999999999754
No 225
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=95.12 E-value=0.33 Score=40.46 Aligned_cols=107 Identities=14% Similarity=-0.017 Sum_probs=62.9
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~ 111 (165)
-++.+|.|....||++.... + .+++|.-...-... .........|..+++... ...++.++. .+.+...
T Consensus 5 i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~---~~~i~~l~~~~~~~~~~~ 77 (331)
T cd05624 5 IIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLK----RAETACFREERNVLVNGD---CQWITTLHYAFQDENYLY 77 (331)
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHh----hHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEcCCEEE
Confidence 35789999999999998763 3 68888653211000 111223344555554332 223444432 3556677
Q ss_pred EEEecCCCCchHHHHHHHcC-CC-CH----HHHHHHHHHHHHHHhc
Q 048614 112 IGMRYLEPPHIILRKGLIAG-IK-YP----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g-~~-~~----~~a~~iG~~La~~h~~ 151 (165)
+||||++ ...|.+.+.+. .. .. .++.+|...|..+|..
T Consensus 78 lv~Ey~~--gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~ 121 (331)
T cd05624 78 LVMDYYV--GGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL 121 (331)
T ss_pred EEEeCCC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9999997 34677777652 22 22 3456778888888854
No 226
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=95.11 E-value=0.4 Score=38.06 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=63.8
Q ss_pred ecCCCceeEEEEEEeCCC----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614 39 EVGDGNLNFVYIVVGSSG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~ 112 (165)
++|.|....||++...++ .+++|+...... .-...+...|.+.++.+.. |. +.+++ ..+.....+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~e~~~~~~l~h--~n-ii~~~~~~~~~~~~~l 72 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT------PDEQLLFLQEVQPYRELNH--PN-VLQCLGQCIESIPYLL 72 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCC------hHHHHHHHHHHHHHHhCCC--CC-cceEEEEECCCCceEE
Confidence 578899999999864322 678887542211 0112334556666665432 33 34444 345677899
Q ss_pred EEecCCCCchHHHHHHHcCCC------C----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIK------Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~------~----~~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...|++.+..... . -.++.+|...|+-+|...
T Consensus 73 v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (269)
T cd05042 73 VLEFCP--LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD 120 (269)
T ss_pred EEEeCC--CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 999997 4577777755321 1 246778888888888765
No 227
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=95.11 E-value=0.25 Score=40.88 Aligned_cols=106 Identities=9% Similarity=-0.020 Sum_probs=63.8
Q ss_pred EecCCC--ceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 38 KEVGDG--NLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 38 ~~l~~G--n~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
..+|.| ....||++.+. +| .++||.-..-.- ..-..+....|.++|+.+.. |..++-. ++.+.+...+
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--pniv~~~~~~~~~~~~~l 76 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-----TNEMVTFLQGELHVSKLFNH--PNIVPYRATFIADNELWV 76 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhc-----cHHHHHHHHHHHHHHHhcCC--CCeeeEEEEEEECCEEEE
Confidence 456777 45678898775 45 788897432110 00112344457777776533 4444332 3446677889
Q ss_pred EEecCCCCchHHHHHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAG--I-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g--~-~~----~~~a~~iG~~La~~h~~t 152 (165)
||||++ +..+++.+... . .. -.++.+|...|+-+|...
T Consensus 77 v~e~~~--~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 121 (327)
T cd08227 77 VTSFMA--YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG 121 (327)
T ss_pred EEeccC--CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 44676666432 2 21 246778888999998654
No 228
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=95.10 E-value=0.71 Score=36.17 Aligned_cols=106 Identities=20% Similarity=0.051 Sum_probs=68.0
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
.++.+|.|....||++.+.. + .+++|.-.... . -.......|.++|+.+.. |..++-. ++.+.....+
T Consensus 7 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~---~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~l 77 (262)
T cd06613 7 LIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP----G---DDFEIIQQEISMLKECRH--PNIVAYFGSYLRRDKLWI 77 (262)
T ss_pred EEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc----h---hhHHHHHHHHHHHHhCCC--CChhceEEEEEeCCEEEE
Confidence 46788999999999998753 3 67777664211 1 134566777777776643 4433332 2346677788
Q ss_pred EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ...+...+... ... -.++.++...|+.+|...
T Consensus 78 ~~e~~~--~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~ 121 (262)
T cd06613 78 VMEYCG--GGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG 121 (262)
T ss_pred EEeCCC--CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 34666655443 222 246777888888888654
No 229
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=95.09 E-value=0.35 Score=39.14 Aligned_cols=109 Identities=12% Similarity=0.017 Sum_probs=67.3
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~~ 112 (165)
.++.+|.|....||++.+. +| .++||.-....... .-...+...|..+|+.+.. |..++-... .+.+...+
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~~--~~iv~~~~~~~~~~~~~l 77 (285)
T cd05631 4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----RKGEAMALNEKRILEKVNS--RFVVSLAYAYETKDALCL 77 (285)
T ss_pred EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh----hhhHHHHHHHHHHHHhcCC--CcEEEEEEEEccCCeEEE
Confidence 4577899999999999875 45 78888754321100 0112345668888876643 333333333 35567789
Q ss_pred EEecCCCCchHHHHHHHc-CC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIA-GI-KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~-g~-~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ + ..|...+.. +. .. -.++.++...|+.+|...
T Consensus 78 v~e~~~-~-g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (285)
T cd05631 78 VLTIMN-G-GDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER 122 (285)
T ss_pred EEEecC-C-CcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 3 356555533 11 12 246778888888898753
No 230
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=95.07 E-value=0.35 Score=38.04 Aligned_cols=109 Identities=17% Similarity=0.081 Sum_probs=66.7
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~ 111 (165)
..+.+|.|....||++.+. .+ .+++|.-..-.- ..+......+...|.++|+.+.. | .+.+++. .+.+...
T Consensus 6 ~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~--~~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 6 RGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPD--SPETKKEVNALECEIQLLKNLQH--E-RIVQYYGCLRDDETLS 80 (263)
T ss_pred ccceecCCCceEEEEEEEcCCCcEEEEEEEeeccc--chhhHHHHHHHHHHHHHHHhCCC--C-CeeeeEEEEccCCeEE
Confidence 3467888888899999875 34 788886331110 01111122345567667765532 3 3344443 3667888
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
++||+++ ...+++.+...... -.++.++...|+.+|..
T Consensus 81 ~v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 123 (263)
T cd06625 81 IFMEYMP--GGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN 123 (263)
T ss_pred EEEEECC--CCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 9999997 34677776654332 24667788888888854
No 231
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=95.03 E-value=0.33 Score=39.35 Aligned_cols=105 Identities=11% Similarity=0.070 Sum_probs=66.9
Q ss_pred eEecCCCceeEEEEEEeCC-----------------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC
Q 048614 37 IKEVGDGNLNFVYIVVGSS-----------------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDH 98 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-----------------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~ 98 (165)
.+.+|.|....||++...+ + .+.||....... .-...+...|.+.|+.+.. |.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~------~~~~~~~~~E~~~l~~l~~--~~- 80 (296)
T cd05095 10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN------KNARNDFLKEIKIMSRLKD--PN- 80 (296)
T ss_pred eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC------HHHHHHHHHHHHHHHhCCC--CC-
Confidence 4678999999999985321 1 466666542211 1123455678888877643 33
Q ss_pred CceEE--EEcCCCceEEEecCCCCchHHHHHHHcCCC----------------CHHHHHHHHHHHHHHHhcc
Q 048614 99 VPEVY--HFDRTMSLIGMRYLEPPHIILRKGLIAGIK----------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 99 vP~v~--~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~----------------~~~~a~~iG~~La~~h~~t 152 (165)
+++++ +.+.+...++||+++ ..+|.+.+.+... .-.++.+|...|+.+|...
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 150 (296)
T cd05095 81 IIRLLAVCITSDPLCMITEYME--NGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN 150 (296)
T ss_pred cceEEEEEecCCccEEEEEeCC--CCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33443 346677899999997 3467676655321 2356788889999999765
No 232
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=95.03 E-value=0.4 Score=38.61 Aligned_cols=68 Identities=13% Similarity=0.028 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhc
Q 048614 80 RAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 80 R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~vMEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~ 151 (165)
+...|+.+++.+ -...+++++.+ +.....+||||++ ...|...+.+ +... -.++.+|...|+-+|..
T Consensus 62 ~~~~~~~~~~~l---~h~niv~~~~~~~~~~~~~lv~ey~~--~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 136 (274)
T cd05076 62 AFFETASLMSQV---SHIHLAFVHGVCVRGSENIMVEEFVE--HGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK 136 (274)
T ss_pred HHHHHHHHHhcC---CCCCeeeEEEEEEeCCceEEEEecCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 334444444433 33445555554 5566789999998 3467666654 2222 24678888888888865
Q ss_pred c
Q 048614 152 T 152 (165)
Q Consensus 152 t 152 (165)
.
T Consensus 137 ~ 137 (274)
T cd05076 137 N 137 (274)
T ss_pred C
Confidence 4
No 233
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=95.01 E-value=0.27 Score=41.37 Aligned_cols=106 Identities=16% Similarity=0.117 Sum_probs=65.5
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD------- 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------- 106 (165)
.++.+|.|....||++.+. .+ .++||.-..... ..-...+...|...|+.+.. |..++-.-.+.
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 28 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-----NQTHAKRAYRELVLMKCVNH--KNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred EEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc-----CchhHHHHHHHHHHHHhcCC--CCccccceeecccccccc
Confidence 5678999999999999876 34 788997542211 12233567778888876642 33332221121
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~ 151 (165)
.....+||||++. .+.+.+..... ...++.++...|+.+|..
T Consensus 101 ~~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 145 (364)
T cd07875 101 FQDVYIVMELMDA---NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145 (364)
T ss_pred cCeEEEEEeCCCC---CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC
Confidence 1235799999983 34444433211 124788899999999965
No 234
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=95.01 E-value=0.46 Score=37.47 Aligned_cols=105 Identities=17% Similarity=0.036 Sum_probs=66.8
Q ss_pred cCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 048614 40 VGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMRY 116 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vMEd 116 (165)
+|.|....||++.+.. + .+++|.-....-. .. -...+...|...|+.+.. |..++-+ ++.|.....++|||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~---~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~ 74 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIV-ET---GQQEHIFSEKEILEECNH--PFIVKLYRTFKDKKYIYMLMEY 74 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcch-hh---hHHHHHHHHHHHHHhCCC--CCEeeeeeeEEcCCccEEEEec
Confidence 4667778899999873 4 8999976532211 01 123567778777776642 4433322 34577788999999
Q ss_pred CCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 117 LEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 L~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
.+ ...|.+.+.+....+ .++.+|...|+-+|...
T Consensus 75 ~~--~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~ 113 (262)
T cd05572 75 CL--GGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRG 113 (262)
T ss_pred CC--CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 97 457877776654332 35567788888888643
No 235
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.01 E-value=0.44 Score=38.77 Aligned_cols=108 Identities=13% Similarity=-0.013 Sum_probs=69.4
Q ss_pred eeEecCCCceeEEEEEEeC--------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-E
Q 048614 36 TIKEVGDGNLNFVYIVVGS--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-F 105 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~ 105 (165)
-.+++|.|....||++... .+ .+++|....... .-...+...|..+|+.+... |..++-+-. .
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~i~~~~~~~~ 91 (304)
T cd05101 19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVSEMEMMKMIGKH-KNIINLLGACT 91 (304)
T ss_pred ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc------hHHHHHHHHHHHHHHhhccC-CCchheeEEEe
Confidence 3478999999999988631 22 588887653321 11235677888888777443 544443322 2
Q ss_pred cCCCceEEEecCCCCchHHHHHHHcCCC---------------------CHHHHHHHHHHHHHHHhcc
Q 048614 106 DRTMSLIGMRYLEPPHIILRKGLIAGIK---------------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~---------------------~~~~a~~iG~~La~~h~~t 152 (165)
+.....++|||++ ..+|++.+.+... .-.++.+|...|+.+|...
T Consensus 92 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g 157 (304)
T cd05101 92 QDGPLYVIVEYAS--KGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK 157 (304)
T ss_pred cCCceEEEEecCC--CCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 4445669999998 3477777765321 1245778999999999764
No 236
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=95.01 E-value=0.23 Score=38.79 Aligned_cols=104 Identities=15% Similarity=0.065 Sum_probs=65.2
Q ss_pred cCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEEe
Q 048614 40 VGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGMR 115 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vME 115 (165)
+|.|....||++.+.+ | .+++|....... .-.-..++...|.+.|+.+.. |..+ +++. -+.....++||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~~~e~~~l~~~~h--~~i~-~~~~~~~~~~~~~lv~e 73 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADM----IRKNQVDQVLTERDILSQAQS--PYVV-KLYYSFQGKKNLYLVME 73 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhh----hhhhHHHHHHHHHHHHHhCCC--cchh-HHHHheecCcEEEEEEe
Confidence 4678888999999874 5 899996542211 011234566677777776642 3322 2222 24455679999
Q ss_pred cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+++ ...|+..+.+.... -.++.+|...|+.+|...
T Consensus 74 ~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ 113 (265)
T cd05579 74 YLP--GGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNG 113 (265)
T ss_pred cCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 997 34776666553222 257788899999998654
No 237
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=94.99 E-value=0.42 Score=38.55 Aligned_cols=105 Identities=15% Similarity=0.090 Sum_probs=68.3
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC--CCc
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR--TMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~--~~~ 110 (165)
+..+|.|....||++.+.. + .+++|+-..... ... -..+...|...|+.+. -|. ++.++. .+. ...
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~---~~~~~~~e~~~l~~l~--h~n-i~~~~~~~~~~~~~~~ 81 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKE--KEG---FPITSLREINILLKLQ--HPN-IVTVKEVVVGSNLDKI 81 (293)
T ss_pred hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccc--ccc---chhhHHHHHHHHHhcC--CCC-EEEEEEEEEecCCCcE
Confidence 4677888888999999863 4 788887642221 111 1234556888877665 233 444433 445 788
Q ss_pred eEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 048614 111 LIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t 152 (165)
.++||+++ . .|+..+..... . -.++.+|...|+.+|...
T Consensus 82 ~lv~e~~~-~--~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 126 (293)
T cd07843 82 YMVMEYVE-H--DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW 126 (293)
T ss_pred EEEehhcC-c--CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999997 2 66666654321 1 257788899999999765
No 238
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=94.98 E-value=0.34 Score=39.08 Aligned_cols=107 Identities=19% Similarity=0.077 Sum_probs=68.0
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCC--Cc
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRT--MS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~--~~ 110 (165)
.++.+|.|..-.||++.+.. + .+++|....... .-..++...|.+.|+.+.. |..++-.-. .+.+ ..
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~ 76 (287)
T cd06621 5 ELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN------PDLQKQILRELEINKSCKS--PYIVKYYGAFLDESSSSI 76 (287)
T ss_pred EEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc------hHHHHHHHHHHHHHHhCCC--CCeeeeeeEEEccCCCeE
Confidence 56788999988999999863 4 788886542211 1234677788888877642 444443222 2333 46
Q ss_pred eEEEecCCCCchHHHHHHH----cCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 111 LIGMRYLEPPHIILRKGLI----AGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~----~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.+||||++. ..|.+.+. .+... -.++.+|...|+.+|...
T Consensus 77 ~lv~e~~~~--~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~ 125 (287)
T cd06621 77 GIAMEYCEG--GSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK 125 (287)
T ss_pred EEEEEecCC--CCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 799999973 35544332 12222 258889999999999654
No 239
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=94.98 E-value=0.72 Score=36.61 Aligned_cols=106 Identities=13% Similarity=-0.003 Sum_probs=66.5
Q ss_pred eeEecCCCceeEEEEEEeCC-C----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~ 108 (165)
-.+.+|.|....||++.... | .+.||....... .-...+...|...|+.+.. |. +.+++. .+..
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~n-i~~~~~~~~~~~ 78 (269)
T cd05065 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT------EKQRRDFLSEASIMGQFDH--PN-IIHLEGVVTKSR 78 (269)
T ss_pred EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC------HHHHHHHHHHHHHHHhCCC--cC-cceEEEEECCCC
Confidence 45678899999999998652 2 488888653211 1122456677777766532 43 333433 3556
Q ss_pred CceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
...++||+++ ...|.+.+.... .. -.++.++...|+.+|...
T Consensus 79 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g 126 (269)
T cd05065 79 PVMIITEFME--NGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN 126 (269)
T ss_pred ceEEEEecCC--CCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 6688999997 346777665432 12 245677788888888653
No 240
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=94.97 E-value=0.41 Score=39.66 Aligned_cols=106 Identities=9% Similarity=0.011 Sum_probs=61.3
Q ss_pred ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~vM 114 (165)
.+|.|....||++.+.. + .+++|.-....-. ..-...+...|...+ ...+-..++.+++ +.+.+...+||
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~e~~~~--l~~~~h~~Iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAIL----KKKEEKHIMSERNVL--LKNVKHPFLVGLHFSFQTADKLYFVL 75 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHH----hhhHHHHHHHHHHHH--HHhCCCCCCCceeEEEEcCCeEEEEE
Confidence 57888889999998763 3 6888875422110 001112233333322 1222222333443 34567778999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ ...|.+.+...... ..++.+|...|..+|...
T Consensus 76 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~g 116 (325)
T cd05602 76 DYIN--GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 116 (325)
T ss_pred eCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34666666554432 236778888999999754
No 241
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=94.96 E-value=0.57 Score=36.74 Aligned_cols=108 Identities=14% Similarity=0.085 Sum_probs=67.4
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
.++.+|.|....||.+.+.. + .+++|-....... .-...+...|.++|+.+.. |..+|-. ++.+.....+
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~ 76 (256)
T cd08221 4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-----EKERRDALNEIVILSLLQH--PNIIAYYNHFMDDNTLLI 76 (256)
T ss_pred EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-----hhHHHHHHHHHHHHHhCCC--CCeeEEEeEEecCCeEEE
Confidence 46778889888777777653 4 7888875321110 0123456678888887642 4444433 3556677788
Q ss_pred EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||++ ...|.+.+.+. ... -.++.++...|+.+|...
T Consensus 77 ~~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (256)
T cd08221 77 EMEYAN--GGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG 121 (256)
T ss_pred EEEecC--CCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 899997 35677766553 111 245677888888888643
No 242
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=94.96 E-value=0.46 Score=37.47 Aligned_cols=107 Identities=14% Similarity=0.014 Sum_probs=63.3
Q ss_pred EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 048614 38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~v 113 (165)
+.+|.|....||++.+. .| .++||.-....-. -.-...+...|...+.... -...+++++.+ +.+...++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~e~~~~~~~~--~~~~i~~~~~~~~~~~~~~lv 75 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI----AKNQVTNVKAERAIMMIQG--ESPYVAKLYYSFQSKDYLYLV 75 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh----HHHHHHHHHHHHHHHhhcC--CCCCeeeeeeeEEcCCeEEEE
Confidence 56888989999999875 34 7888864311100 0011123344444443222 22344555544 44567899
Q ss_pred EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
|||++ ...|...+..... . -.++.+|...|..+|...
T Consensus 76 ~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ 117 (260)
T cd05611 76 MEYLN--GGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRG 117 (260)
T ss_pred EeccC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99997 3467666655332 2 256788889999998754
No 243
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=94.95 E-value=0.56 Score=39.06 Aligned_cols=107 Identities=16% Similarity=0.120 Sum_probs=69.2
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-c-CCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-D-RTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D-~~~~~ 111 (165)
.+..+|.|....||++.+. +| .++||.-...... .........|.+.|+.+.. |..++-.-.| + .....
T Consensus 14 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 14 DLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST-----PVLAKRTYRELKLLKHLRH--ENIISLSDIFISPLEDIY 86 (328)
T ss_pred EEEeecccCCeEEEEEEECCCCCEEEEEEecccccc-----cchhHHHHHHHHHHHhcCC--CCeeeEeeeEecCCCcEE
Confidence 5788999999999999876 45 7899975432211 1122455668888877753 5544433323 2 45677
Q ss_pred EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
++||+++. .+...+..+... ..++.+|...|+.+|...
T Consensus 87 lv~e~~~~---~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~ 128 (328)
T cd07856 87 FVTELLGT---DLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAG 128 (328)
T ss_pred EEeehhcc---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999972 465555544432 246778888898888765
No 244
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=94.93 E-value=0.14 Score=40.73 Aligned_cols=111 Identities=14% Similarity=0.087 Sum_probs=65.1
Q ss_pred eEecCCCceeEEEEEEeCC--C-eEEEeecCcccccc---CCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCC
Q 048614 37 IKEVGDGNLNFVYIVVGSS--G-SFVIKQALPYVRCI---GESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTM 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~--g-svIvKqa~p~~r~~---~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~ 109 (165)
...+|.|....||++.+.. + .++||+-....... ...+.....+...|...+...-.. |..++-+ ++.+...
T Consensus 5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h-~~i~~~~~~~~~~~~ 83 (269)
T cd08528 5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRH-PNIVRYYKTFLENDR 83 (269)
T ss_pred hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCC-CCeeeEEeeEccCCe
Confidence 4568899999999999865 3 78889876443211 113344455566666655432211 3333222 2446677
Q ss_pred ceEEEecCCCCchHHHHHH---H-cCCCC-----HHHHHHHHHHHHHHHh
Q 048614 110 SLIGMRYLEPPHIILRKGL---I-AGIKY-----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l---~-~g~~~-----~~~a~~iG~~La~~h~ 150 (165)
..++|||++ +..+.+.+ . .+... -.++.++...|+-+|.
T Consensus 84 ~~lv~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 131 (269)
T cd08528 84 LYIVMDLIE--GAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK 131 (269)
T ss_pred EEEEEecCC--CCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 889999997 23444433 2 22222 2466678888888884
No 245
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=94.92 E-value=0.46 Score=39.58 Aligned_cols=108 Identities=14% Similarity=0.026 Sum_probs=66.7
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~ 111 (165)
-++.+|.|....||++.... + .+.||.-...-... .....+...|..+++... ..+++.++. .+.....
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~~~~~ 77 (331)
T cd05597 5 ILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLK----RAETACFREERDVLVNGD---RRWITNLHYAFQDENNLY 77 (331)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhhHHHHHHHHHHHHhCC---CCCCCceEEEEecCCeEE
Confidence 36788999999999998763 4 78888754211100 112344556666665542 233444443 3556678
Q ss_pred EEEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ ...|.+.+.+ +... ..++.+|...|+-+|...
T Consensus 78 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (331)
T cd05597 78 LVMDYYV--GGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG 122 (331)
T ss_pred EEEecCC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 3467776654 2222 235667788888888654
No 246
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=94.89 E-value=0.46 Score=39.47 Aligned_cols=105 Identities=13% Similarity=0.118 Sum_probs=66.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------c
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-------D 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------D 106 (165)
-.+.+|.|....||++.+. +| .++||+-.+.-. .....|...|..+|+.+.. |..++ ++.+ +
T Consensus 9 i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~niv~-~~~~~~~~~~~~ 79 (336)
T cd07849 9 NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH------QTFCQRTLREIKILRRFKH--ENIIG-ILDIIRPPSFES 79 (336)
T ss_pred EEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc------chhHHHHHHHHHHHHhCCC--CCcCc-hhheeecccccc
Confidence 4567899999999999765 45 899998754321 1224567778888887762 43322 2211 1
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
.....++||+++. .+...+..+.... .++.++...|+.+|...
T Consensus 80 ~~~~~lv~e~~~~---~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ 126 (336)
T cd07849 80 FNDVYIVQELMET---DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSAN 126 (336)
T ss_pred cceEEEEehhccc---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1234789999973 4555554443322 36678888888898765
No 247
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=94.88 E-value=0.41 Score=38.50 Aligned_cols=106 Identities=13% Similarity=0.056 Sum_probs=67.9
Q ss_pred eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 048614 36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D 106 (165)
.+..+|.|..+.||++... .+ .+.+|....... .-...+...|...|+.+.. |. +.+++. .+
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~ei~~l~~l~h--~~-iv~~~~~~~~ 79 (288)
T cd05050 9 YVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS------ADMQADFQREAALMAEFDH--PN-IVKLLGVCAV 79 (288)
T ss_pred ecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC------HHHHHHHHHHHHHHHhcCC--Cc-hheEEEEEcC
Confidence 4567888999999999863 23 688887652211 1112455567777776532 33 333443 34
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC---------------------------CHHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~---------------------------~~~~a~~iG~~La~~h~~t 152 (165)
.+...++||+++ ..+|++.+..+.. .-.++.+|...|+.+|...
T Consensus 80 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~ 150 (288)
T cd05050 80 GKPMCLLFEYMA--YGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK 150 (288)
T ss_pred CCccEEEEecCC--CCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence 567799999998 3477777765321 0257888999999999753
No 248
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=94.88 E-value=0.4 Score=37.56 Aligned_cols=107 Identities=19% Similarity=0.110 Sum_probs=65.0
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-CC-CceE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-RT-MSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~~-~~~~ 112 (165)
.+.+|.|...-||++.+.. + .++||........ .-..++...|.+.++.+.. |..++-...+. .+ ...+
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~l 77 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-----RRERKAAEQEAQLLSQLKH--PNIVAYRESWEGEDGLLYI 77 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-----HHHHHHHHHHHHHHHhCCC--CCeeeeeeeecCCCCEEEE
Confidence 4677888888999998864 3 7888885321110 0122445667677766643 55444333333 23 2469
Q ss_pred EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ + .+|.+.+.+. ... -.++.++...|+.+|...
T Consensus 78 v~e~~~-~-~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ 122 (257)
T cd08223 78 VMGFCE-G-GDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH 122 (257)
T ss_pred EecccC-C-CcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 3 4566666542 222 256778888888888754
No 249
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=94.84 E-value=0.29 Score=38.69 Aligned_cols=107 Identities=12% Similarity=0.025 Sum_probs=69.6
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.+.+|.|....||++.+. +| .+++|....- +.. .-.......|+++++.+.. ...+++++ +.+.+...
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~~e~~~~~~l~~--~~~i~~~~~~~~~~~~~~ 78 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIK-----EKKVKYVKIEKEVLTRLNG--HPGIIKLYYTFQDEENLY 78 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccc-----hHHHHHHHHHHHHHHhccc--CCCchhHHHHhcCCceEE
Confidence 457899999999999886 44 7888875431 110 0112456667777776642 22344444 34667888
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
++||+++ ..+|++.+.+.... ..++.++...|+.+|...
T Consensus 79 lv~e~~~--~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~ 122 (280)
T cd05581 79 FVLEYAP--NGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG 122 (280)
T ss_pred EEEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999996 35777777665332 356777888888888654
No 250
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=94.83 E-value=0.29 Score=41.79 Aligned_cols=83 Identities=17% Similarity=0.061 Sum_probs=52.9
Q ss_pred eEecCCCceeEEEEEEe------CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614 37 IKEVGDGNLNFVYIVVG------SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~ 107 (165)
.+.+|.|....||++.. ..+ .+.||.-.+... .-..++...|..+|+.+... | ++.+++. .+.
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~~Ei~il~~l~~H-p-nIv~l~~~~~~~ 111 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH------LTEREALMSELKVLSYLGNH-I-NIVNLLGACTVG 111 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcC------cHHHHHHHHHHHHHHHhcCC-c-ceeeeeeeeccC
Confidence 57789999999999863 123 688887654321 11235667788888876432 3 3334433 466
Q ss_pred CCceEEEecCCCCchHHHHHHH
Q 048614 108 TMSLIGMRYLEPPHIILRKGLI 129 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~ 129 (165)
+...+||||++ . .+|.+.+.
T Consensus 112 ~~~~lv~E~~~-~-g~L~~~l~ 131 (375)
T cd05104 112 GPTLVITEYCC-Y-GDLLNFLR 131 (375)
T ss_pred Ccceeeehhcc-C-CcHHHHHH
Confidence 77889999997 2 35555443
No 251
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=94.82 E-value=0.73 Score=36.58 Aligned_cols=105 Identities=14% Similarity=-0.020 Sum_probs=64.7
Q ss_pred eEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 048614 37 IKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTM 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~ 109 (165)
.+.+|.|....||++... .+ .+++|...+.... -...+...|..+|+.+. -|..+ +++. .+.+.
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~e~~~l~~l~--h~~i~-~~~~~~~~~~~ 79 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE------KQRRDFLSEASIMGQFD--HPNII-HLEGVVTKSKP 79 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCH------HHHHHHHHHHHHHHhCC--CCCcc-eEEEEEecCCc
Confidence 578899999999998763 12 5888876532210 11234555666676553 24433 3333 25566
Q ss_pred ceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614 110 SLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
..++||+++ ..+|.+.+.... .. -.++.++...|+.+|...
T Consensus 80 ~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 126 (267)
T cd05066 80 VMIVTEYME--NGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG 126 (267)
T ss_pred cEEEEEcCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 778999997 346777665432 12 246677888888888653
No 252
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=94.81 E-value=0.51 Score=37.62 Aligned_cols=106 Identities=14% Similarity=0.056 Sum_probs=67.2
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~ 112 (165)
++.+|.|....||++.+.. + .++||.-...... .--.++...|.++|+.+.. |. +++++ +.+.+...+
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~-----~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~i 77 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD-----EDVKKTALREVKVLRQLRH--EN-IVNLKEAFRRKGRLYL 77 (288)
T ss_pred EEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc-----ccchhHHHHHHHHHHhcCC--CC-eeehhheEEECCEEEE
Confidence 5668888888899998763 4 7888865432211 1122577788888887762 32 22222 235567899
Q ss_pred EEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t 152 (165)
+|||++ . ..+.....+.. .. -.++.+|...|+.+|...
T Consensus 78 v~e~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (288)
T cd07833 78 VFEYVE-R-TLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN 120 (288)
T ss_pred EEecCC-C-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 3 45544333322 11 256778899999888654
No 253
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=94.81 E-value=0.4 Score=38.53 Aligned_cols=104 Identities=16% Similarity=0.213 Sum_probs=70.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
....++.|..-.||++... .+ .+++|....... ..++...|.+.|+.+.. | .+++++ +.+.....
T Consensus 23 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--------~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 23 NLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--------NKELIINEILIMKDCKH--P-NIVDYYDSYLVGDELW 91 (286)
T ss_pred HhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--------hHHHHHHHHHHHHHCCC--C-CeeEEEEEEEECCEEE
Confidence 3466788888889999887 34 899997642211 44567778887776653 3 333333 34667888
Q ss_pred EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
++||+++ ..+|.+.+.... .. -.++.++...|+.+|...
T Consensus 92 lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g 136 (286)
T cd06614 92 VVMEYMD--GGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN 136 (286)
T ss_pred EEEeccC--CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 457877777653 22 247888899999999643
No 254
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=94.80 E-value=0.21 Score=40.19 Aligned_cols=106 Identities=12% Similarity=-0.011 Sum_probs=62.9
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
++.+|.|....||++.+. ++ .+++|.-..... .-...+...|.+.|+.+.. |..++-+ ++.+.+...+|
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv 77 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT------VELQKQIMSELEILYKCDS--PYIIGFYGAFFVENRISIC 77 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC------hHHHHHHHHHHHHHHhCCC--CCeeeEEEEEEECCEEEEE
Confidence 467899999999999875 34 788885431110 1112345567777765532 4333322 34466777899
Q ss_pred EecCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLI-AGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~-~g~~~~~~a~~iG~~La~~h~~t 152 (165)
||+++. . .+..... .......++.++...|+.+|...
T Consensus 78 ~e~~~~-~-~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 115 (279)
T cd06619 78 TEFMDG-G-SLDVYRKIPEHVLGRIAVAVVKGLTYLWSLK 115 (279)
T ss_pred EecCCC-C-ChHHhhcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999983 3 3322110 00112357888888999888765
No 255
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=94.79 E-value=0.5 Score=37.50 Aligned_cols=104 Identities=13% Similarity=-0.053 Sum_probs=67.0
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~ 112 (165)
...+|.|-...||++.+.+ + .+++|....... -...+...|.+.|+.+.. |..+ +++. .+.+...+
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~iv-~~~~~~~~~~~~~l 82 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS-------RYVQPLHEEIALHSYLKH--RNIV-QYLGSDSENGFFKI 82 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCH-------HHHHHHHHHHHHHHhcCC--CCee-eeeeeeccCCEEEE
Confidence 3578888888899998763 4 788886542211 122456677777776642 3333 3333 45567789
Q ss_pred EEecCCCCchHHHHHHHcC--CC--C----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAG--IK--Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g--~~--~----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ...|+..+.+. .. . -.++.+|...|+-+|...
T Consensus 83 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 128 (268)
T cd06624 83 FMEQVP--GGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ 128 (268)
T ss_pred EEecCC--CCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 45777777653 11 1 135678899999999653
No 256
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=94.78 E-value=0.65 Score=37.07 Aligned_cols=106 Identities=16% Similarity=0.102 Sum_probs=68.8
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPE-VYHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~~~~~~v 113 (165)
++.+|.|...-||++.+. +| .++||.-..... ..-..++...|.+.|+.+.. |..++- -++.+.....++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~E~~~l~~l~~--~~iv~~~~~~~~~~~~~iv 76 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-----DEGVPSTAIREISLLKELNH--PNIVRLLDVVHSENKLYLV 76 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-----cccchhHHHHHHHHHHhcCC--CCccCHhheeccCCeEEEE
Confidence 467899999999999875 45 788886532111 01122456678888887752 332221 145577888899
Q ss_pred EecCCCCchHHHHHHHcCC--C-C----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGI--K-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~--~-~----~~~a~~iG~~La~~h~~t 152 (165)
|||++ . .++..+.... . . -.++.++...|+.+|...
T Consensus 77 ~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~ 119 (283)
T cd07835 77 FEFLD--L-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR 119 (283)
T ss_pred EeccC--c-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99996 2 5666665432 1 1 246778888999999764
No 257
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=94.77 E-value=0.81 Score=35.96 Aligned_cols=105 Identities=12% Similarity=-0.017 Sum_probs=66.1
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR------ 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------ 107 (165)
-++.++.|....||++.+. ++ .+++|.-.... ...++...|.++++.+... ..+++++.+-.
T Consensus 10 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 10 LVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE--------DEEEEIKEEYNILRKYSNH--PNIATFYGAFIKKNPPG 79 (275)
T ss_pred heeeecCCCCeEEEEEEECCCCcEEEEEEEecCc--------hhHHHHHHHHHHHHHhcCC--CChheEEEEEEecCCCC
Confidence 4577888888889999986 34 68888644221 1335677788888776432 34555555432
Q ss_pred --CCceEEEecCCCCchHHHHHHHc-----CCCCH----HHHHHHHHHHHHHHhcc
Q 048614 108 --TMSLIGMRYLEPPHIILRKGLIA-----GIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 --~~~~~vMEdL~~~~~~lr~~l~~-----g~~~~----~~a~~iG~~La~~h~~t 152 (165)
....++|||++ ...|.+.+.. +.... .++.++...|..+|...
T Consensus 80 ~~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~ 133 (275)
T cd06608 80 NDDQLWLVMELCG--GGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK 133 (275)
T ss_pred cceEEEEEEEcCC--CCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 23579999998 3355554433 12222 36777888888888653
No 258
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=94.73 E-value=1.2 Score=35.44 Aligned_cols=108 Identities=13% Similarity=0.023 Sum_probs=68.6
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC---
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTM--- 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~--- 109 (165)
+..+|.|....||++.... + .++||........ . --......|...++.+.++--..+.+++.+ +.+.
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~---~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE--E---GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred EEEecccCceEEEEEEECCCCCEEEEEEecccccc--c---hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence 5678888888899999864 5 7888876533321 1 112345568888888877643344444433 4454
Q ss_pred --ceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614 110 --SLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 --~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
..++||+++ . .+.+.+.... .. -.++.+|...|+.+|...
T Consensus 79 ~~~~l~~e~~~-~--~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~ 127 (287)
T cd07838 79 LKLTLVFEHVD-Q--DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR 127 (287)
T ss_pred ceeEEEehhcc-c--CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 789999997 3 4555554321 11 247778888888888764
No 259
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=94.71 E-value=0.64 Score=36.46 Aligned_cols=107 Identities=19% Similarity=0.190 Sum_probs=66.1
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~ 111 (165)
.++.+|.|..+-+|.+.+. +| .+++|.-.-. +.. .-...+...|.++|+.+.. |. +++++. .+.....
T Consensus 4 ~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~-~~~----~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~ 75 (256)
T cd08218 4 KVKKIGEGSFGKAILVKSKEDGKQYVIKEINIS-KMS----PKEREESRKEVAVLSNMKH--PN-IVQYQESFEENGNLY 75 (256)
T ss_pred EEEEeccCCceEEEEEEEcCCCCEEEEEEEEhH-hCC----hHHHHHHHHHHHHHHhCCC--CC-eeeeEeeecCCCeEE
Confidence 3678899999999999876 34 7888864311 100 1123456667777776643 33 334443 3556677
Q ss_pred EEEecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||++. ...|...+.... .. -.++.++...|+.+|...
T Consensus 76 lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (256)
T cd08218 76 IVMDYCE--GGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK 121 (256)
T ss_pred EEEecCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 345655554321 11 245778888898888543
No 260
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=94.67 E-value=0.76 Score=37.39 Aligned_cols=106 Identities=18% Similarity=0.149 Sum_probs=69.6
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
.++.+|.|....||++.+. ++ .+++|.....- .-..++...|...|+.... |..++-. ++.+.+...+
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-------~~~~~~~~~e~~~l~~l~h--p~i~~~~~~~~~~~~~~l 93 (293)
T cd06647 23 RFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ-------QPKKELIINEILVMRENKH--PNIVNYLDSYLVGDELWV 93 (293)
T ss_pred eeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc-------chHHHHHHHHHHHHhhcCC--CCeeehhheeeeCCcEEE
Confidence 5688999999999999865 34 78889753111 1123566677777766542 4333222 2346778899
Q ss_pred EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...+++.+.+.... ..++.++...|+.+|...
T Consensus 94 v~e~~~--~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~g 135 (293)
T cd06647 94 VMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 135 (293)
T ss_pred EEecCC--CCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 34677776654322 346778888888888654
No 261
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=94.65 E-value=0.94 Score=36.61 Aligned_cols=108 Identities=11% Similarity=-0.049 Sum_probs=66.0
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
.+.+|.|....||++.+. ++ .+.+|+-.+..... . -.......|.++|+.+.. |..++-. .+.+.+...++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-~---~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv 78 (285)
T cd05632 5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK-R---KGESMALNEKQILEKVNS--QFVVNLAYAYETKDALCLV 78 (285)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh-h---hHHHHHHHHHHHHHHcCC--cCceeEEEEEecCCEEEEE
Confidence 466899999999999876 34 68888754332110 0 112234568888877654 3444443 33455667799
Q ss_pred EecCCCCchHHHHHHHc-CC--CC----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIA-GI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~-g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|+..+.. +. .. -.++.++...|..+|...
T Consensus 79 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ 122 (285)
T cd05632 79 LTIMN--GGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN 122 (285)
T ss_pred EEecc--CccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99998 3466655533 21 11 246677788888888654
No 262
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=94.65 E-value=0.54 Score=38.47 Aligned_cols=106 Identities=18% Similarity=0.110 Sum_probs=67.6
Q ss_pred eEecCCCceeEEEEEEeC-CC---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCc
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~ 110 (165)
.+.+|.|....||++.+. ++ .+.+|....... .-...+...|.+.|..+... | .+++++. .+....
T Consensus 12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~Ei~~l~~l~~h-~-~iv~~~~~~~~~~~~ 83 (303)
T cd05088 12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------KDDHRDFAGELEVLCKLGHH-P-NIINLLGACEHRGYL 83 (303)
T ss_pred eeeecCCCCceEEEEEEccCCceeeEEEEEecccCC------HHHHHHHHHHHHHHHHhcCC-C-CcceEEEEECCCCCc
Confidence 467899999999999864 33 346666443221 12234666788888776432 3 4555543 355678
Q ss_pred eEEEecCCCCchHHHHHHHcCC----------------C-----CHHHHHHHHHHHHHHHhcc
Q 048614 111 LIGMRYLEPPHIILRKGLIAGI----------------K-----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~----------------~-----~~~~a~~iG~~La~~h~~t 152 (165)
.++|||++ ..+|.+.+.... . .-.++.+|...|+.+|...
T Consensus 84 ~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g 144 (303)
T cd05088 84 YLAIEYAP--HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ 144 (303)
T ss_pred eEEEEeCC--CCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999997 346766665322 1 1246778889999999754
No 263
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=94.64 E-value=0.27 Score=41.23 Aligned_cols=107 Identities=15% Similarity=0.118 Sum_probs=65.4
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD------- 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------- 106 (165)
.++.+|.|....||++.+. .+ .+.||.-..... -.-...|...|...|+.... |..++-.-.+.
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-----NQTHAKRAYRELVLMKCVNH--KNIISLLNVFTPQKSLEE 93 (355)
T ss_pred EEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-----ChHHHHHHHHHHHHHHHhCC--Cchhceeeeeeccccccc
Confidence 5678999999999999875 34 788886532111 11223566678887776642 43333222222
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++. .+.+.+...-. ...++.+|...|+.+|...
T Consensus 94 ~~~~~lv~e~~~~---~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g 139 (355)
T cd07874 94 FQDVYLVMELMDA---NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG 139 (355)
T ss_pred cceeEEEhhhhcc---cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1235799999973 34444432211 1247788999999999754
No 264
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=94.63 E-value=0.24 Score=39.59 Aligned_cols=105 Identities=19% Similarity=0.180 Sum_probs=70.3
Q ss_pred eEecCCCceeEEEEEEeC-----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CC
Q 048614 37 IKEVGDGNLNFVYIVVGS-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RT 108 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~ 108 (165)
.+.||.|..--|||+... .+ .|+||...+.... -..+....|.+.|+.+ +. | ++.+++.+- .+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~------~~~~~~~~e~~~l~~l-~h-~-ni~~~~g~~~~~~ 74 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSE------EEEEEFLNEIQILRKL-RH-P-NIVKLYGFCIENE 74 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSH------HHHHHHHHHHHHHHTH-SB-T-TBE-EEEEEESSS
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccc------ccceeeeecccccccc-cc-c-ccccccccccccc
Confidence 467899999999999877 12 7999998653321 1146777777777766 22 2 344455444 45
Q ss_pred CceEEEecCCCCchHHHHHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAG--I-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g--~-~~----~~~a~~iG~~La~~h~~t 152 (165)
...+||||++ ...|++.|... . .. -.++.+|+..|+-+|...
T Consensus 75 ~~~lv~e~~~--~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~ 123 (259)
T PF07714_consen 75 PLFLVMEYCP--GGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN 123 (259)
T ss_dssp SEEEEEE--T--TEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccc--ccccccccccccccccccccccccccccccccccccccc
Confidence 6799999997 44888888876 2 22 257888999999998754
No 265
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=94.63 E-value=0.26 Score=39.27 Aligned_cols=106 Identities=17% Similarity=0.151 Sum_probs=66.2
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCC-ceEEEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHV-PEVYHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v-P~v~~~D~~~~~~v 113 (165)
.+.+|.|....||++...+ + .++||+-..... .....+...|...++.+... |..+ ..-++.+.+...+|
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~e~~~l~~~~~h-~~i~~~~~~~~~~~~~~lv 76 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY------SWEECMNLREVKSLRKLNEH-PNIVKLKEVFRENDELYFV 76 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhcc------chhHHHHHHHHHHHHhccCC-CCchhHHHHhhcCCcEEEE
Confidence 3567888889999999863 4 788997543221 12223344566666665422 2221 11234567888999
Q ss_pred EecCCCCchHHHHHHHcCC--C-----CHHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGI--K-----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~--~-----~~~~a~~iG~~La~~h~~t 152 (165)
||+++ . ++++.+.... . ...++.++...|..+|...
T Consensus 77 ~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~ 119 (283)
T cd07830 77 FEYME--G-NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG 119 (283)
T ss_pred EecCC--C-CHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99995 2 4666665533 2 1357778888888888765
No 266
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=94.60 E-value=0.51 Score=43.23 Aligned_cols=110 Identities=22% Similarity=0.157 Sum_probs=67.4
Q ss_pred cceeEecCCCceeEEEEEEeCC-C-eEEEeecCccccc-c-----------------CCC-CCCChH-------------
Q 048614 34 ALTIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRC-I-----------------GES-WPMTKE------------- 79 (165)
Q Consensus 34 ~~~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~-~-----------------~~~-~~l~~~------------- 79 (165)
+.+.++++.|.+--|++..+.+ | .|+||--+|.++. . .++ ..++..
T Consensus 121 ~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~E 200 (537)
T PRK04750 121 DFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDE 200 (537)
T ss_pred hcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHh
Confidence 4566899999999999999876 7 8999999988631 0 011 112211
Q ss_pred -HHHHHHHHHHHhhccC----CCCCceEEEEcCCCceEEEecCCCCchHHHH--HHHc-CCCCHHHHHHHHHHH
Q 048614 80 -RAYFEALALKEHGQLC----PDHVPEVYHFDRTMSLIGMRYLEPPHIILRK--GLIA-GIKYPLLAEHMSEFM 145 (165)
Q Consensus 80 -R~~~E~~~L~~~~~~~----p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~--~l~~-g~~~~~~a~~iG~~L 145 (165)
....|+..+..+.+.. .-+||++|.---...++|||++. +. .+.+ .+.+ |.....+|+......
T Consensus 201 lD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~-G~-~l~d~~~l~~~g~d~~~la~~~v~~~ 272 (537)
T PRK04750 201 LDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMY-GI-PVSDVAALRAAGTDMKLLAERGVEVF 272 (537)
T ss_pred hCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeec-Cc-cHHhHHHHHhcCCCHHHHHHHHHHHH
Confidence 1234555555554422 23799999644678999999998 33 3332 2333 333345666554433
No 267
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=94.58 E-value=0.6 Score=37.25 Aligned_cols=104 Identities=17% Similarity=0.097 Sum_probs=64.9
Q ss_pred ecCCCceeEEEEEEeCC-C---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614 39 EVGDGNLNFVYIVVGSS-G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI 112 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~-g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~ 112 (165)
.+|.|....||++.+.+ | .+.+|.-..... .-...+...|.+.++.+... |..+ +++.+ +.....+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~iv-~~~~~~~~~~~~~l 73 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------KDDHRDFAGELEVLCKLGHH-PNII-NLLGACEHRGYLYL 73 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC------HHHHHHHHHHHHHHHhhccC-CCee-eEEEEEecCCCceE
Confidence 46788888999998753 2 356665543221 12235677788888777543 4433 34332 3345679
Q ss_pred EEecCCCCchHHHHHHHcCCC---------------------CHHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIK---------------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~---------------------~~~~a~~iG~~La~~h~~t 152 (165)
+||+++ + .+|.+.+.+... .-.++.++...|+-+|...
T Consensus 74 v~e~~~-~-~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ 132 (270)
T cd05047 74 AIEYAP-H-GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ 132 (270)
T ss_pred EEEeCC-C-CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 3 367777764321 1246778888899898753
No 268
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=94.57 E-value=0.5 Score=39.33 Aligned_cols=106 Identities=13% Similarity=0.100 Sum_probs=67.4
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC----
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR---- 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~---- 107 (165)
....+|.|....||++.+. +| .++||+-..... -.....+...|...|+.+.. |. +.+++.+ +.
T Consensus 9 ~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~n-i~~~~~~~~~~~~~~ 80 (337)
T cd07858 9 PIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-----NRIDAKRTLREIKLLRHLDH--EN-VIAIKDIMPPPHREA 80 (337)
T ss_pred EEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-----ccchhHHHHHHHHHHHhcCC--CC-ccchHHheecccccc
Confidence 4568899999999999876 34 899998653221 11234567778888887643 32 2222211 11
Q ss_pred -CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 108 -TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 -~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
....++||+++. .+.+.+.++... -.++.+|...|.-+|...
T Consensus 81 ~~~~~lv~e~~~~---~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 128 (337)
T cd07858 81 FNDVYIVYELMDT---DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN 128 (337)
T ss_pred cCcEEEEEeCCCC---CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 235899999972 466666554332 246778888888888764
No 269
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=94.53 E-value=0.33 Score=38.79 Aligned_cols=104 Identities=13% Similarity=0.049 Sum_probs=63.6
Q ss_pred ecCCCceeEEEEEEeCCC----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 39 EVGDGNLNFVYIVVGSSG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
++|.|....||++...++ .+++|.-..... .-..++...|...++.+.. |..++-+ ...+.....+|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~e~~~~~~l~h--~~iv~~~~~~~~~~~~~lv 73 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS------SKEQNEFLQQGDPYRILQH--PNILQCLGQCVEAIPYLLV 73 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC------hHHHHHHHHHHHHHhccCC--cchhheEEEecCCCccEEE
Confidence 578888888998864322 466666432211 1123566777777765432 4444433 23455667899
Q ss_pred EecCCCCchHHHHHHHcCCC----C-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIK----Y-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~----~-----~~~a~~iG~~La~~h~~t 152 (165)
|||++ ..+|++.+.+... . -.++.+|...|.-+|...
T Consensus 74 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 119 (268)
T cd05086 74 FEYCE--LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN 119 (268)
T ss_pred EecCC--CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 99997 4577777765321 1 246778888999999654
No 270
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=94.49 E-value=0.85 Score=36.37 Aligned_cols=102 Identities=12% Similarity=0.085 Sum_probs=60.7
Q ss_pred ecCCCceeEEEEEEeCC-------------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGSS-------------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH 104 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~-------------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~ 104 (165)
.+|.|..+.||+..... . .+++|.-.+.-+ -...+...|+..|+.+. -.++++++.
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-------~~~~~~~~~~~~l~~l~---hp~iv~~~~ 71 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR-------DISLAFFETASMMRQVS---HKHIVLLYG 71 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh-------hHHHHHHHHHHHHHhCC---CCCEeeEEE
Confidence 57889999999987421 1 366665332111 11123444555554442 234555554
Q ss_pred --EcCCCceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614 105 --FDRTMSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 105 --~D~~~~~~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
.+.....++|||++ ...|...+... ... -.++.+|...|+-+|...
T Consensus 72 ~~~~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 125 (262)
T cd05077 72 VCVRDVENIMVEEFVE--FGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD 125 (262)
T ss_pred EEecCCCCEEEEeccc--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence 46678899999997 34566655432 222 257888999999999653
No 271
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=94.48 E-value=0.44 Score=38.30 Aligned_cols=107 Identities=15% Similarity=0.086 Sum_probs=66.0
Q ss_pred eeEecCCCceeEEEEEEeCCC------------------eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG------------------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPD 97 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g------------------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~ 97 (165)
-++.+|.|....||++.+... .+++|.-..-. -.-..++...|.++|+.+.. |.
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~------~~~~~~~~~~e~~~l~~l~~--~~ 80 (296)
T cd05051 9 FVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA------SDNAREDFLKEVKILSRLSD--PN 80 (296)
T ss_pred ccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc------CHHHHHHHHHHHHHHHhcCC--CC
Confidence 467889999999999887532 24555422111 01122445567777776643 43
Q ss_pred CCceE-EEEcCCCceEEEecCCCCchHHHHHHHcCC-----------CC-----HHHHHHHHHHHHHHHhcc
Q 048614 98 HVPEV-YHFDRTMSLIGMRYLEPPHIILRKGLIAGI-----------KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 98 ~vP~v-~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~-----------~~-----~~~a~~iG~~La~~h~~t 152 (165)
.++-+ ++.+.....++||+++ ..+|.+.+.+.. .. -.++.++...|+-+|...
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~ 150 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYME--NGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN 150 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCC--CCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 33322 2234578899999997 357777776543 11 246778888899999765
No 272
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=94.46 E-value=0.7 Score=37.42 Aligned_cols=108 Identities=11% Similarity=0.015 Sum_probs=65.0
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~~~~~v 113 (165)
.+.+|.|....||.+.+. .+ .++||.-.+..... .-...+...|..+|+.+.. |..++-...+ +.+...++
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv 78 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----RKGESMALNEKQILEKVNS--RFVVSLAYAYETKDALCLV 78 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccc----hHHHHHHHHHHHHHHhCCC--CCeeeeeEEEecCCEEEEE
Confidence 456899999999998876 34 78888644221100 0112344568888876643 4444444333 44566799
Q ss_pred EecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||++ ...|++.+.... .. -.++.++...|+-+|...
T Consensus 79 ~e~~~--g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 122 (285)
T cd05630 79 LTLMN--GGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER 122 (285)
T ss_pred EEecC--CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99997 346666653321 12 135677788888888643
No 273
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=94.42 E-value=0.78 Score=36.63 Aligned_cols=105 Identities=11% Similarity=0.039 Sum_probs=67.0
Q ss_pred eEecCCCceeEEEEEEeCC-----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cC
Q 048614 37 IKEVGDGNLNFVYIVVGSS-----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF---DR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~ 107 (165)
.+.+|.|....||++.... + .+++|....... .....+...|...|+.+. .|..++ ++++ +.
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~------~~~~~~~~~e~~~l~~l~--h~ni~~-~~~~~~~~~ 81 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS------EIQVTLLLQESCLLYGLS--HQNILP-ILHVCIEDG 81 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCC------HHHHHHHHHHHHHHHhCC--CCCCCe-EEEEEecCC
Confidence 3667888888999998754 4 788887542221 122355666777666552 244444 4443 34
Q ss_pred CCceEEEecCCCCchHHHHHHHcCC--------CC-----HHHHHHHHHHHHHHHhcc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIAGI--------KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~g~--------~~-----~~~a~~iG~~La~~h~~t 152 (165)
....+++|+.+ ...|+..+.... .. ..++.+|...|+-+|...
T Consensus 82 ~~~~~~~~~~~--~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 137 (280)
T cd05043 82 EPPFVLYPYMN--WGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG 137 (280)
T ss_pred CCCEEEEEcCC--CCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 67888999987 457777765431 11 257788899999998654
No 274
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=94.36 E-value=0.94 Score=37.05 Aligned_cols=108 Identities=15% Similarity=-0.027 Sum_probs=68.5
Q ss_pred eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC
Q 048614 36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDR 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~ 107 (165)
-.+.+|.|....||++..- .+ .+.||.-..... .-..++...|.++|+.+... |..++-+ ++.+.
T Consensus 39 ~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~~ 111 (302)
T cd05055 39 FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH------SSEREALMSELKIMSHLGNH-ENIVNLLGACTIG 111 (302)
T ss_pred EcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC------hHHHHHHHHHHHHHHhccCC-CCcceEEEEEecC
Confidence 3567899999999998742 12 466665442221 12235677888888877432 4433332 23455
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCC--C-----HHHHHHHHHHHHHHHhcc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIAGIK--Y-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~g~~--~-----~~~a~~iG~~La~~h~~t 152 (165)
....++|||++ ...|.+.+..... . -.++.+|...|+.+|...
T Consensus 112 ~~~~lv~e~~~--~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ 161 (302)
T cd05055 112 GPILVITEYCC--YGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN 161 (302)
T ss_pred CceEEEEEcCC--CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 66789999997 3477777654221 1 247778888999999764
No 275
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=94.36 E-value=0.27 Score=39.01 Aligned_cols=105 Identities=13% Similarity=0.042 Sum_probs=62.2
Q ss_pred EecCCCceeEEEEEEeCCC----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 048614 38 KEVGDGNLNFVYIVVGSSG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD------- 106 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------- 106 (165)
+.+|.|....||++.+... .+.+|.-...... .-..++...|.+.|+.+. -..+.+++.+.
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~-----~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~ 76 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICT-----RSEMEDFLSEAVCMKEFD---HPNVMRLIGVCLQTVESE 76 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCC-----HHHHHHHHHHHHHHHhCC---CCCcceEEEEEccCCccc
Confidence 4688899999999987643 3666655432110 011345556777776653 23455555431
Q ss_pred -CCCceEEEecCCCCchHHHHHHHc------CCC-----CHHHHHHHHHHHHHHHhcc
Q 048614 107 -RTMSLIGMRYLEPPHIILRKGLIA------GIK-----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 -~~~~~~vMEdL~~~~~~lr~~l~~------g~~-----~~~~a~~iG~~La~~h~~t 152 (165)
.....++|||++ . ..|...+.. ... .-.++.+|...|+-+|...
T Consensus 77 ~~~~~~~v~e~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 132 (272)
T cd05075 77 GYPSPVVILPFMK-H-GDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS 132 (272)
T ss_pred CCCCcEEEEEeCC-C-CcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 123579999997 2 356555531 111 1246778888899999654
No 276
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=94.33 E-value=0.82 Score=36.16 Aligned_cols=106 Identities=16% Similarity=0.066 Sum_probs=65.4
Q ss_pred eeEecCCCceeEEEEEEeCC-C----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCC
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~ 108 (165)
..+.+|.|....||++.+.. + .+++|....... .-...+...|.+.|+.+.. | ++.+++ ..+.+
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~ 79 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT------EKQRQDFLSEASIMGQFSH--H-NIIRLEGVVTKFK 79 (268)
T ss_pred EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC------HHHHHHHHHHHHHHhcCCC--C-CeeEEEEEEccCC
Confidence 45678989888999998742 2 477776643221 0112345567666665532 3 233333 33556
Q ss_pred CceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
...++||+++ ...|+..+.+. ... -.++.++...|..+|...
T Consensus 80 ~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 127 (268)
T cd05063 80 PAMIITEYME--NGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN 127 (268)
T ss_pred CcEEEEEcCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 6789999998 34677776543 211 256778888888888665
No 277
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=94.33 E-value=0.58 Score=37.88 Aligned_cols=105 Identities=13% Similarity=0.093 Sum_probs=66.4
Q ss_pred eEecCCCceeEEEEEEeCC-------------C---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc
Q 048614 37 IKEVGDGNLNFVYIVVGSS-------------G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP 100 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-------------g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP 100 (165)
.+.+|.|....||++...+ + .++||...+.... -..++...|.++|+.+.. | .++
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~ei~~l~~l~h--~-~i~ 80 (295)
T cd05097 10 KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTK------TARNDFLKEIKIMSRLKN--P-NII 80 (295)
T ss_pred hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCH------HHHHHHHHHHHHHHhCCC--C-CcC
Confidence 3678999999999987532 1 4778877643211 112355667777776643 3 344
Q ss_pred eEEE--EcCCCceEEEecCCCCchHHHHHHHcCC------------CC-----HHHHHHHHHHHHHHHhcc
Q 048614 101 EVYH--FDRTMSLIGMRYLEPPHIILRKGLIAGI------------KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 101 ~v~~--~D~~~~~~vMEdL~~~~~~lr~~l~~g~------------~~-----~~~a~~iG~~La~~h~~t 152 (165)
+++. .+.....+||||++ ...|.+.+.... .. -.++.++...|+-+|...
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 149 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYME--NGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN 149 (295)
T ss_pred eEEEEEcCCCccEEEEecCC--CCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 4443 35667789999998 346666654321 01 246788889999999765
No 278
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=94.27 E-value=0.94 Score=35.95 Aligned_cols=106 Identities=12% Similarity=0.066 Sum_probs=68.5
Q ss_pred eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614 36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D 106 (165)
.++.+|.|....||++... +. .+++|..... ...--..+...|.++|+.+.. |. +++++.+ |
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~ 79 (275)
T cd05046 9 EITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT------KDENLQSEFRRELDMFRKLSH--KN-VVRLLGLCRE 79 (275)
T ss_pred eeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc------cchHHHHHHHHHHHHHHhcCC--cc-eeeeEEEECC
Confidence 5677899999999999853 11 5777754311 111224567788888887743 33 3445544 5
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC---------CC-----HHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGI---------KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~---------~~-----~~~a~~iG~~La~~h~~t 152 (165)
.+...+|||+++ ...|++.+.... .. ..++.+|...|+-+|...
T Consensus 80 ~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~ 137 (275)
T cd05046 80 AEPHYMILEYTD--LGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR 137 (275)
T ss_pred CCcceEEEEecC--CCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC
Confidence 567899999997 457888776533 11 246678888888888553
No 279
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=94.26 E-value=0.65 Score=37.54 Aligned_cols=108 Identities=12% Similarity=0.048 Sum_probs=66.1
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~ 111 (165)
.++.+|.|....||++.+. ++ .+.||+-.... .. .....+...|..+|+.++. |..++-... -+.+...
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~ 76 (285)
T cd05605 4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-----RKGEAMALNEKQILEKVNS--RFVVSLAYAYETKDALC 76 (285)
T ss_pred EEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhh-----hhhHHHHHHHHHHHHhcCC--CCEeeeeeeecCCCeEE
Confidence 3567899999999999876 34 68888754321 11 1112344568888877753 444443322 3556788
Q ss_pred EEEecCCCCchHHHHHHHc-CC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIA-GI-KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~-g~-~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||||+. ...|...+.. +. .. -.++.++...|.-+|...
T Consensus 77 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (285)
T cd05605 77 LVLTLMN--GGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER 122 (285)
T ss_pred EEEeccC--CCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999997 3456555533 21 22 135677788888888543
No 280
>PHA03211 serine/threonine kinase US3; Provisional
Probab=94.24 E-value=0.82 Score=40.79 Aligned_cols=98 Identities=13% Similarity=0.060 Sum_probs=67.0
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~ 111 (165)
-...+|.|....||++.... + .|+||... ..+...|+++|+.+.. | ++.+++. .+.....
T Consensus 173 i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-------------~~~~~~E~~iL~~L~H--p-nIv~l~~~~~~~~~~~ 236 (461)
T PHA03211 173 IHRALTPGSEGCVFESSHPDYPQRVVVKAGW-------------YASSVHEARLLRRLSH--P-AVLALLDVRVVGGLTC 236 (461)
T ss_pred EEEEEccCCCeEEEEEEECCCCCEEEEeccc-------------ccCHHHHHHHHHHCCC--C-CCCcEEEEEEECCEEE
Confidence 45679999999999999874 3 79999521 1234568888887643 3 3444443 4567788
Q ss_pred EEEecCCCCchHHHHHHHcCC--C----CHHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGI--K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~--~----~~~~a~~iG~~La~~h~~t 152 (165)
++||++.. .|...+.... . .-.++.+|...|+.+|...
T Consensus 237 lv~e~~~~---~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g 280 (461)
T PHA03211 237 LVLPKYRS---DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG 280 (461)
T ss_pred EEEEccCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999972 4555554421 1 1368889999999999764
No 281
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=94.23 E-value=0.91 Score=36.58 Aligned_cols=110 Identities=18% Similarity=0.160 Sum_probs=67.3
Q ss_pred Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC
Q 048614 33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRT 108 (165)
Q Consensus 33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~ 108 (165)
+++ -++.+|.|....||++.+. ++ .++||........ . ....+...|.++|+.+.. |..++-. +..+..
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~---~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~ 80 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK--D---GFPITALREIKILKKLKH--PNVVPLIDMAVERP 80 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC--C---CcchhHHHHHHHHHhcCC--CCccchhhheeccc
Confidence 345 4567999999999999875 34 7999986543321 1 112345678888887743 4333321 122222
Q ss_pred --------CceEEEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 109 --------MSLIGMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 --------~~~~vMEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
...++|||.+. .+...+.. +... ..++.+|...|+.+|...
T Consensus 81 ~~~~~~~~~~~lv~~~~~~---~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~ 135 (311)
T cd07866 81 DKSKRKRGSVYMVTPYMDH---DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH 135 (311)
T ss_pred ccccccCceEEEEEecCCc---CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 34899999972 34454443 2222 246778888899998754
No 282
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=94.21 E-value=0.76 Score=42.04 Aligned_cols=123 Identities=17% Similarity=0.089 Sum_probs=74.8
Q ss_pred CCcc-eeEecCCCceeEEEEEEeC-CCe-EEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 048614 32 FDAL-TIKEVGDGNLNFVYIVVGS-SGS-FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FD 106 (165)
Q Consensus 32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~gs-vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D 106 (165)
.++. .+.+||-|----||.+.-. .|. +-+|- ++...-.-.=-+.-.+.|..+|.... ...|-++|+ -|
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~----LkKS~M~~~~Qv~hV~aERdiL~~~d---s~~vVKLyYsFQD 212 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKI----LKKSEMLKKNQVEHVRAERDILAEVD---SPWVVKLYYSFQD 212 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeec----ccHHHHHhhhhHHHHHHHHHHhhhcC---CCcEEEEEEEecC
Confidence 4455 7889999999999999765 453 33332 22110001112355677888886622 334555553 47
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCCCH-HH----HHHHHHHHHHHHhcc---------------------cccccCch
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGIKYP-LL----AEHMSEFMAKTLFYT---------------------SLLYRTTT 160 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~~-~~----a~~iG~~La~~h~~t---------------------sd~~l~~~ 160 (165)
+++--+|||||+ +..++..|+.....+ +. ++++--++..+|... |||+|+..
T Consensus 213 ~~~LYLiMEylP--GGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 213 KEYLYLIMEYLP--GGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred CCeeEEEEEecC--CccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccch
Confidence 788889999998 458888888865543 22 223334455556543 88888765
Q ss_pred hhh
Q 048614 161 EHK 163 (165)
Q Consensus 161 ~~k 163 (165)
..|
T Consensus 291 l~~ 293 (550)
T KOG0605|consen 291 LDK 293 (550)
T ss_pred hhh
Confidence 544
No 283
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=94.19 E-value=0.97 Score=37.36 Aligned_cols=110 Identities=12% Similarity=0.015 Sum_probs=66.5
Q ss_pred EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCC-------CCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC
Q 048614 38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGE-------SWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDR 107 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~-------~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~ 107 (165)
..+|.|....||++.+. .| .++||........... +...-..+...|.++|+.+.. |..++-. ++.+.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~ 92 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH--ENIMGLVDVYVEG 92 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC--cceeeeeEEEecC
Confidence 45888888899999876 34 7888875422110000 000111245667777776643 3333222 23466
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+...++||+++. .+.+.+...... -.++.++...|..+|...
T Consensus 93 ~~~~lv~e~~~~---~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~ 139 (335)
T PTZ00024 93 DFINLVMDIMAS---DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWY 139 (335)
T ss_pred CcEEEEEecccc---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 778899999972 466666543322 357888888999998765
No 284
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=94.19 E-value=0.78 Score=36.53 Aligned_cols=105 Identities=19% Similarity=0.219 Sum_probs=61.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.++.+|.|....||++.+. +| .+++|+...-... -...+...|.+.+..... .|..+ +++ +.+.....
T Consensus 5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~e~~~~~~~~~-~~~iv-~~~~~~~~~~~~~ 76 (283)
T cd06617 5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS------QEQKRLLMDLDISMRSVD-CPYTV-TFYGALFREGDVW 76 (283)
T ss_pred EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc------HHHHHHHHHHHHHHHHcC-CCCee-eeeEEEecCCcEE
Confidence 4577899999999999876 45 8999976533211 112345555554222111 23333 333 34566778
Q ss_pred EEEecCCCCchHHHHHHH----cCCCC-----HHHHHHHHHHHHHHHhc
Q 048614 112 IGMRYLEPPHIILRKGLI----AGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~----~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
++|||++. .+.+.+. .+... -.++.+|...|..+|..
T Consensus 77 lv~e~~~~---~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 122 (283)
T cd06617 77 ICMEVMDT---SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK 122 (283)
T ss_pred EEhhhhcc---cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 99999973 3333332 22222 25678888889999864
No 285
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=94.18 E-value=0.52 Score=36.98 Aligned_cols=103 Identities=13% Similarity=-0.039 Sum_probs=66.6
Q ss_pred ecCCCceeEEEEEEeCC--C---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 39 EVGDGNLNFVYIVVGSS--G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~--g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
.+|.|..+.||++...+ + .+.||........ -...+...|...|+.+.. |..+.-. +.++ ....+
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~-~~~~~ 72 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS------DIMDDFLKEAAIMHSLDH--ENLIRLYGVVLT-HPLMM 72 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccH------HHHHHHHHHHHHHhhcCC--CCccceeEEEcC-CeEEE
Confidence 57889999999997642 2 4788876643321 234567778788776643 3332211 2344 67789
Q ss_pred EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ...|++.+.+.. .. ..++.++...|+.+|...
T Consensus 73 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 117 (257)
T cd05040 73 VTELAP--LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR 117 (257)
T ss_pred EEEecC--CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 457777776533 11 246678899999888764
No 286
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=94.17 E-value=1.1 Score=36.60 Aligned_cols=110 Identities=15% Similarity=0.036 Sum_probs=69.7
Q ss_pred Ccc-eeEecCCCceeEEEEEEeCC--------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE
Q 048614 33 DAL-TIKEVGDGNLNFVYIVVGSS--------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV 102 (165)
Q Consensus 33 ~~~-~v~~l~~Gn~N~v~rv~~~~--------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v 102 (165)
+.+ -.+++|.|....||++...+ + .+++|.-.+... .-...+...|.+.|+.+... |. ++++
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~e~~~l~~l~~h-~~-i~~~ 89 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT------EKDLSDLISEMEMMKMIGKH-KN-IINL 89 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC------hHHHHHHHHHHHHHHHhcCC-CC-EeeE
Confidence 345 44789999999999997531 1 477776554321 11235666788888776443 33 3333
Q ss_pred EE--EcCCCceEEEecCCCCchHHHHHHHcCC----------------CC-----HHHHHHHHHHHHHHHhcc
Q 048614 103 YH--FDRTMSLIGMRYLEPPHIILRKGLIAGI----------------KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 103 ~~--~D~~~~~~vMEdL~~~~~~lr~~l~~g~----------------~~-----~~~a~~iG~~La~~h~~t 152 (165)
+. .+.....+|||+++ ...|++.+.... .. -.++.++...|+-+|...
T Consensus 90 ~~~~~~~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g 160 (307)
T cd05098 90 LGACTQDGPLYVIVEYAS--KGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK 160 (307)
T ss_pred EEEEecCCceEEEEecCC--CCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 32 34466779999998 347777776531 11 146888999999999753
No 287
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=94.16 E-value=0.41 Score=43.19 Aligned_cols=103 Identities=20% Similarity=0.150 Sum_probs=72.3
Q ss_pred eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT--MSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~--~~~~ 112 (165)
-+++||.|+.--||....... ++-+|.-.+- .++.+-...|+.+|+.+.- ..+-++|..=.. .--|
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~--------~m~~~~f~~Ea~iMk~L~H---~~lV~l~gV~~~~~piyI 278 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG--------SMSPEAFLREAQIMKKLRH---EKLVKLYGVCTKQEPIYI 278 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEecc--------ccChhHHHHHHHHHHhCcc---cCeEEEEEEEecCCceEE
Confidence 356899999999999988755 6777765543 3555666689999987754 223444444333 3589
Q ss_pred EEecCCCCchHHHHHHHc--CCC-----CHHHHHHHHHHHHHHHhc
Q 048614 113 GMRYLEPPHIILRKGLIA--GIK-----YPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~--g~~-----~~~~a~~iG~~La~~h~~ 151 (165)
||||++ ...|++.|.. |.. .-.+|.||+.-|+-+...
T Consensus 279 VtE~m~--~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~ 322 (468)
T KOG0197|consen 279 VTEYMP--KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK 322 (468)
T ss_pred EEEecc--cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC
Confidence 999998 4588899987 332 236899998888766543
No 288
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=94.16 E-value=0.48 Score=38.60 Aligned_cols=106 Identities=12% Similarity=0.096 Sum_probs=68.0
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
....+|.|....||++.+. .+ .++||... . ...-..++...|...|+.... |..++-. .+.+.+...+
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~----~---~~~~~~~~~~~e~~~l~~l~h--~~ii~~~~~~~~~~~~~l 96 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMD----L---RKQQRRELLFNEVVIMRDYHH--ENVVDMYNSYLVGDELWV 96 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEe----c---chHHHHHHHHHHHHHHHhCCC--CcHHHHHHheecCCeEEE
Confidence 4677899999999999875 34 78888532 1 111223455567777766532 3322211 3446778899
Q ss_pred EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ...+...+..+... -.++.+|...|+.+|...
T Consensus 97 v~e~~~--~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ 138 (292)
T cd06658 97 VMEFLE--GGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQG 138 (292)
T ss_pred EEeCCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 34666666555432 257788888999998764
No 289
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=94.15 E-value=1.1 Score=34.92 Aligned_cols=107 Identities=20% Similarity=0.122 Sum_probs=66.4
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
.+.++.|...-||++.+.. | .+++|.-... +.. .-..++...|+..|+.+.. |..++-. ...+.....++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~-~~~----~~~~~~~~~E~~~l~~~~h--~~i~~~~~~~~~~~~~~lv 77 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLT-KMP----VKEKEASKKEVILLAKMKH--PNIVTFFASFQENGRLFIV 77 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHh-hcc----chhhHHHHHHHHHHHhCCC--CChhhhhheeccCCeEEEE
Confidence 4678888888999998863 4 7888864321 110 1123456678888877753 3322222 23355667899
Q ss_pred EecCCCCchHHHHHHHcCC--C-C----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGI--K-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~--~-~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|.+.+.... . . -.++.++...|+-+|...
T Consensus 78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (257)
T cd08225 78 MEYCD--GGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK 121 (257)
T ss_pred EecCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99997 356666665422 1 1 245678888888888643
No 290
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=94.15 E-value=1.1 Score=36.94 Aligned_cols=108 Identities=13% Similarity=0.072 Sum_probs=65.5
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
....+|.|....||++.+. .| .+++|.-...... ..-...+...|.+.|+.+.. |..++-. ++.+.+...+
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~l 98 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ----TNEKWQDIIKEVKFLQQLKH--PNTIEYKGCYLKEHTAWL 98 (313)
T ss_pred cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccC----chHHHHHHHHHHHHHHhCCC--CCCccEEEEEEeCCEEEE
Confidence 4567999999999999875 34 6787865322111 11122355667777777642 3333222 2346677889
Q ss_pred EEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||+++ .+-..+.. +... -.++.+|...|+-+|...
T Consensus 99 v~e~~~~---~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g 141 (313)
T cd06633 99 VMEYCLG---SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN 141 (313)
T ss_pred EEecCCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999973 23333332 2221 136678888888888765
No 291
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=94.09 E-value=1.2 Score=36.81 Aligned_cols=106 Identities=16% Similarity=0.134 Sum_probs=68.5
Q ss_pred eEecCCCceeEEEEEEeCC---C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-----C
Q 048614 37 IKEVGDGNLNFVYIVVGSS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-----R 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-----~ 107 (165)
.+.+|.|....||++.+.. + .+++|.-..... -.....+...|.++|+.+... | .+++++.++ .
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~~h-~-~iv~~~~~~~~~~~~ 77 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-----KKILAKRALRELKLLRHFRGH-K-NITCLYDMDIVFPGN 77 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-----cchhHHHHHHHHHHHHHhcCC-C-Chheeeeeeeecccc
Confidence 4678889999999999762 4 788887542221 122345777899888877432 3 344555432 1
Q ss_pred -CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 108 -TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 -~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
....++||+++ . .|.+.+..+..+ -.++.+|...|..+|...
T Consensus 78 ~~~~~~~~e~~~-~--~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g 125 (332)
T cd07857 78 FNELYLYEELME-A--DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSAN 125 (332)
T ss_pred CCcEEEEEeccc-C--CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 23467778776 2 566766655443 247788899999999765
No 292
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=94.06 E-value=0.81 Score=36.19 Aligned_cols=104 Identities=13% Similarity=0.032 Sum_probs=65.3
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c------
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D------ 106 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D------ 106 (165)
.+.+|.|....||++.... + .+++|.-... .-...+...|...|+..... |.. .+++.+ +
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~--------~~~~~~~~~e~~~l~~~~~h-~~i-~~~~~~~~~~~~~~~ 80 (272)
T cd06637 11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--------GDEEEEIKQEINMLKKYSHH-RNI-ATYYGAFIKKNPPGM 80 (272)
T ss_pred HHheeecCCeEEEEEEEcCCCcEEEEEEEEcC--------CccHHHHHHHHHHHHHhcCC-CCe-eeEeeEEeecCCCCC
Confidence 4567888888899998753 3 6888864311 12235677788877766332 333 333322 1
Q ss_pred CCCceEEEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++ ...|.+.+... ... -.++.++...|+.+|...
T Consensus 81 ~~~~~iv~e~~~--~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ 131 (272)
T cd06637 81 DDQLWLVMEFCG--AGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK 131 (272)
T ss_pred CcEEEEEEEcCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 234679999998 34676666652 222 247788999999999764
No 293
>PTZ00284 protein kinase; Provisional
Probab=94.05 E-value=0.92 Score=39.86 Aligned_cols=104 Identities=12% Similarity=0.013 Sum_probs=65.7
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCC---CCCceEEEEc---C
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCP---DHVPEVYHFD---R 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p---~~vP~v~~~D---~ 107 (165)
-+..||.|....||++.+.. + .|.||.-.... ........|..+|+.+...-. ..++.++.|- .
T Consensus 133 i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~ 204 (467)
T PTZ00284 133 ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--------KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET 204 (467)
T ss_pred EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--------hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence 45679999999999998763 4 78899753211 112345668888887765321 1244444332 2
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~ 150 (165)
....+|||++++ .+.+.+.+...+ ..++.+|...|.-+|.
T Consensus 205 ~~~~iv~~~~g~---~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~ 249 (467)
T PTZ00284 205 GHMCIVMPKYGP---CLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHT 249 (467)
T ss_pred ceEEEEEeccCC---CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356789998873 344445443222 2577888899999995
No 294
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=94.04 E-value=0.64 Score=38.20 Aligned_cols=105 Identities=14% Similarity=0.102 Sum_probs=69.4
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC----
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT---- 108 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~---- 108 (165)
.+.+|.|....||++.+.+ | .++||.-.+.... .....+...|.+.|+.+. .|..++ ++.+ +.+
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----~~~~~~~~~e~~~l~~l~--~~~i~~-~~~~~~~~~~~~~ 76 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDD-----LIDAKRILREIKLLRHLR--HENIIG-LLDILRPPSPEDF 76 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCCcEEEEEeecccccc-----chhhhhHHHHHHHHHhcC--Ccchhh-hhhhhcccCcccc
Confidence 4678888889999999864 4 7999976643321 233467778888888775 243322 2222 222
Q ss_pred -CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 109 -MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 -~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
...++||+++ . .+.+.+.++... -.++.+|...|+.+|...
T Consensus 77 ~~~~lv~e~~~-~--~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~g 123 (330)
T cd07834 77 NDVYIVTELME-T--DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSAN 123 (330)
T ss_pred cceEEEecchh-h--hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4589999997 2 577777665332 237788888899888765
No 295
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=93.99 E-value=0.32 Score=38.52 Aligned_cols=103 Identities=12% Similarity=0.030 Sum_probs=61.4
Q ss_pred ecCCCceeEEEEEEeCC-C--------eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC
Q 048614 39 EVGDGNLNFVYIVVGSS-G--------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRT 108 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~-g--------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~ 108 (165)
.+|.|....||++.... + .+++|....-. .-..++...|...|+.... |..+.-. +..+.+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~~~h--~~iv~~~~~~~~~~ 72 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-------RNYSESFFEAASMMSQLSH--KHLVLNYGVCVCGD 72 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchh-------HHHHHHHHHHHHHHHhCCC--CChhheeeEEEeCC
Confidence 57888889999997642 1 24444432111 1122345556666665432 3333222 344557
Q ss_pred CceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t 152 (165)
...+||||++ ...|.+.+..+.. . -.++.+|...|+.+|...
T Consensus 73 ~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (258)
T cd05078 73 ESIMVQEYVK--FGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG 120 (258)
T ss_pred CcEEEEecCC--CCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 8899999997 3477777765331 1 246788889999998654
No 296
>PHA03209 serine/threonine kinase US3; Provisional
Probab=93.96 E-value=0.93 Score=38.27 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=65.9
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.+..+|.|...-||++.... + .+++|.... .+...|+.+|+.+.. | .+++++ +.+.....
T Consensus 70 ~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-------------~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~ 133 (357)
T PHA03209 70 VIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK-------------GTTLIEAMLLQNVNH--P-SVIRMKDTLVSGAITC 133 (357)
T ss_pred EEEEecCCCCeEEEEEEECCCCceEEEEeCCc-------------cccHHHHHHHHhCCC--C-CCcChhheEEeCCeeE
Confidence 56788999999999998864 3 788886321 233568888877653 3 334443 44667788
Q ss_pred EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||++.. .+...+... ... -.++.+|...|+.+|...
T Consensus 134 lv~e~~~~---~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 177 (357)
T PHA03209 134 MVLPHYSS---DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR 177 (357)
T ss_pred EEEEccCC---cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999973 444555442 221 257788999999999764
No 297
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=93.96 E-value=1.1 Score=36.11 Aligned_cols=105 Identities=16% Similarity=0.089 Sum_probs=66.9
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
.++.+|.|....||++.+. +| .+++|....... . -...+...|...|+.+.. |. +++++ +.+.+...
T Consensus 9 ~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~---~~~~~~~~e~~~l~~l~h--~n-i~~~~~~~~~~~~~~ 79 (291)
T cd07870 9 NLEKLGEGSYATVYKGISRINGQLVALKVISMKTE---E---GVPFTAIREASLLKGLKH--AN-IVLLHDIIHTKETLT 79 (291)
T ss_pred EEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc---C---CCcHHHHHHHHHHHhcCC--CC-EeEEEEEEecCCeEE
Confidence 5678999999999999765 34 899998643221 1 112355678888877642 32 33444 34566778
Q ss_pred EEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
+|||+++. .+...+... ... ..++.+|...|+.+|...
T Consensus 80 lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 123 (291)
T cd07870 80 FVFEYMHT---DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH 123 (291)
T ss_pred EEEecccC---CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999972 333334332 111 246778888899898765
No 298
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=93.93 E-value=0.92 Score=36.18 Aligned_cols=107 Identities=15% Similarity=0.072 Sum_probs=67.8
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~ 111 (165)
.++.+|.|....||++.+.+ | .+++|.-.... ....-.+....|.++|+.+.. |. ++++ ++.+.....
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~ 76 (286)
T cd07846 5 NLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESE-----DDKMVKKIAMREIRMLKQLRH--EN-LVNLIEVFRRKKRLY 76 (286)
T ss_pred EeeeeccCCCeEEEEEEECCCCCEEEEEeHhhcc-----CcchhhHHHHHHHHHHHhcCC--cc-hhhHHHhcccCCeEE
Confidence 45778999999999999863 4 78888743211 112223455667778777643 22 2222 234667789
Q ss_pred EEEecCCCCchHHHHHHHcCC-C----CHHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGI-K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~-~----~~~~a~~iG~~La~~h~~t 152 (165)
++|||++ ...+........ . .-.++.+|...|+.+|...
T Consensus 77 lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (286)
T cd07846 77 LVFEFVD--HTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN 120 (286)
T ss_pred EEEecCC--ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 345655443332 1 2356778889999999765
No 299
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=93.91 E-value=0.93 Score=36.55 Aligned_cols=106 Identities=19% Similarity=0.165 Sum_probs=65.6
Q ss_pred eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 048614 36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D 106 (165)
-++.+|.|....||++... .+ .+.||.-..... .-...+...|..+|+.+. .| ++++++. .+
T Consensus 10 i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~ 80 (288)
T cd05061 10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS------LRERIEFLNEASVMKGFT--CH-HVVRLLGVVSK 80 (288)
T ss_pred eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC------HHHHHHHHHHHHHHHhCC--CC-CeeeEEEEEcC
Confidence 4678999999999998542 12 577775321110 011234556777776664 24 4555553 45
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC---------------CHHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~---------------~~~~a~~iG~~La~~h~~t 152 (165)
.....++|||++ ..+|.+.+..... .-.++.+|...|+-+|...
T Consensus 81 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 139 (288)
T cd05061 81 GQPTLVVMELMA--HGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK 139 (288)
T ss_pred CCCcEEEEeCCC--CCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 667899999997 3467777654210 1246778888888888754
No 300
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=93.87 E-value=0.47 Score=38.74 Aligned_cols=107 Identities=15% Similarity=0.024 Sum_probs=65.3
Q ss_pred eeEecCCCceeEEEEEEeC-CC-----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM 109 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~ 109 (165)
.++.+|.|....||++.+. +| .+++|...+- ..+-...+...|...++.+.. |..+.-.-.+....
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~~~e~~~~~~l~h--~niv~~~~~~~~~~ 82 (303)
T cd05110 11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET------TGPKANVEFMDEALIMASMDH--PHLVRLLGVCLSPT 82 (303)
T ss_pred eccccccCCCccEEEEEEecCCCcceeeEEEEecccc------CCHHHHHHHHHHHHHHHhCCC--CCcccEEEEEcCCC
Confidence 5667999999999999764 23 2455654321 111222344556666665532 55444444444566
Q ss_pred ceEEEecCCCCchHHHHHHHcCC-C-----CHHHHHHHHHHHHHHHhcc
Q 048614 110 SLIGMRYLEPPHIILRKGLIAGI-K-----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g~-~-----~~~~a~~iG~~La~~h~~t 152 (165)
..++||+++ . ..+.+.+.... . .-.++.++...|+.+|...
T Consensus 83 ~~~v~e~~~-~-g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 129 (303)
T cd05110 83 IQLVTQLMP-H-GCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR 129 (303)
T ss_pred ceeeehhcC-C-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 789999998 3 35666665532 1 1356788899999999764
No 301
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=93.86 E-value=0.47 Score=36.90 Aligned_cols=104 Identities=15% Similarity=0.046 Sum_probs=65.6
Q ss_pred cCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceEEEec
Q 048614 40 VGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFDRTMSLIGMRY 116 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~~~~~vMEd 116 (165)
+|.|...-||++...+ + .+++|.-....-. -....++...|...|+... .|..++-.- +-+.....++||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~v~e~ 74 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKII----KRKEVEHTLTERNILSRIN--HPFIVKLHYAFQTEEKLYLVLEY 74 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhc----chHHHHHHHHHHHHHHHcC--CCcHHHHHHHeecCCeeEEEEec
Confidence 4677777899998763 4 7888864322110 0124568888888887776 243333222 2355667999999
Q ss_pred CCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhc
Q 048614 117 LEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 117 L~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~ 151 (165)
++ ..+|.+.+..... . ..++.++...|..+|..
T Consensus 75 ~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~ 112 (250)
T cd05123 75 AP--GGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSL 112 (250)
T ss_pred CC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 97 3477777765532 2 24566778888888763
No 302
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=93.83 E-value=1.1 Score=37.05 Aligned_cols=105 Identities=16% Similarity=0.246 Sum_probs=65.1
Q ss_pred EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----cCCCce
Q 048614 38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF----DRTMSL 111 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----D~~~~~ 111 (165)
+.+|.|....||++.+. +| .++||.-....+. . -...+...|...|+.+... |..++ ++.+ +.....
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~--~---~~~~~~~~E~~~l~~l~~h-~ni~~-~~~~~~~~~~~~~~ 85 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN--A---TDAQRTFREIMFLQELGDH-PNIVK-LLNVIKAENDKDIY 85 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc--c---hhhhhhhHHHHHHHHhcCC-CCccc-eeeeeccCCCceEE
Confidence 45677777789999876 34 7888976432221 1 1123455688888776222 44444 4433 223468
Q ss_pred EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
+|||+++ . .|...+..+... -.++.+|...|+.+|...
T Consensus 86 lv~e~~~-~--~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 127 (337)
T cd07852 86 LVFEYME-T--DLHAVIRANILEDVHKRYIMYQLLKALKYIHSGN 127 (337)
T ss_pred EEecccc-c--CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999997 2 666666555322 147788899999998753
No 303
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=93.83 E-value=0.97 Score=36.18 Aligned_cols=104 Identities=14% Similarity=0.103 Sum_probs=65.2
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~ 112 (165)
+..+|.|....||++.+.. + .+++|.-.... .-...+...|.+.|+.+.. |. +++++ +.+.....+
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h--~~-ii~~~~~~~~~~~~~~ 79 (282)
T cd06643 10 IGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-------EEELEDYMVEIDILASCDH--PN-IVKLLDAFYYENNLWI 79 (282)
T ss_pred HhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-------HHHHHHHHHHHHHHHHCCC--CC-eeeEEEEEeeCCEEEE
Confidence 3568888889999998874 4 45555542111 1123456667777776642 33 33333 556778899
Q ss_pred EEecCCCCchHHHHHHHc--CCC----CHHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIA--GIK----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~--g~~----~~~~a~~iG~~La~~h~~t 152 (165)
+|||++ + ..+...+.+ +.. ...++.+|...|+.+|...
T Consensus 80 v~e~~~-~-~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ 123 (282)
T cd06643 80 LIEFCA-G-GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK 123 (282)
T ss_pred EEEecC-C-CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 3 356555543 211 1347778888888898754
No 304
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=93.77 E-value=2.3 Score=34.22 Aligned_cols=107 Identities=12% Similarity=0.025 Sum_probs=65.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cC-----
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DR----- 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~----- 107 (165)
.+..+|.|....||++.+. ++ .++||.-..... .... ..+...|.+.|+.+.. |..++-.-.+ +.
T Consensus 16 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~----~~~~-~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 16 KLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE----KEGF-PITALREIKILQLLKH--ENVVNLIEICRTKATPYN 88 (310)
T ss_pred EEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC----cCCc-hhHHHHHHHHHHhCCC--CCccceEEEEeccccccc
Confidence 5678999999999999876 34 788886432111 1111 2344568888876643 5544433222 22
Q ss_pred ---CCceEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614 108 ---TMSLIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 ---~~~~~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t 152 (165)
....+|||+++. .+.+.+.... .. -.++.+|...|..+|...
T Consensus 89 ~~~~~~~lv~e~~~~---~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 139 (310)
T cd07865 89 RYKGSFYLVFEFCEH---DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK 139 (310)
T ss_pred CCCceEEEEEcCCCc---CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 234899999983 4555554432 11 257788888998888764
No 305
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=93.77 E-value=0.19 Score=44.54 Aligned_cols=117 Identities=18% Similarity=0.157 Sum_probs=74.1
Q ss_pred cceeEecCC--CceeEEEEEEeC------C-C---eEEEeecC--ccc---cccCC--CCCCChHH------------HH
Q 048614 34 ALTIKEVGD--GNLNFVYIVVGS------S-G---SFVIKQAL--PYV---RCIGE--SWPMTKER------------AY 82 (165)
Q Consensus 34 ~~~v~~l~~--Gn~N~v~rv~~~------~-g---svIvKqa~--p~~---r~~~~--~~~l~~~R------------~~ 82 (165)
+-+++.||+ |.+..|.+|+-. + . +||||-+- +.. +.... .-.++.+. -.
T Consensus 35 ~~~~~~Igdg~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~l~~~HN 114 (414)
T PF07914_consen 35 NKKATNIGDGKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPSQLALRALSENMKFEGGKGFDEEKEWEEFEKFLREMHN 114 (414)
T ss_pred CcceeeccCCcchheeEEEEEeeeccCccccCCCceEEEEeccHhhHHHHHHhhccccccccchhhHHHHHHHHHHHhhH
Confidence 456777775 778999999842 1 1 89999885 222 22110 11122222 12
Q ss_pred HHHHHHHHhhccC--CCCCceEEE---EcCCC---ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 048614 83 FEALALKEHGQLC--PDHVPEVYH---FDRTM---SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 83 ~E~~~L~~~~~~~--p~~vP~v~~---~D~~~---~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd 154 (165)
.|..+++.+.+.- +-.+|++|+ ||.++ ..++|||++ +.... . +..| .-+.-..+|.+.||++|..+-.
T Consensus 115 rEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ve-n~~~~-~-~~e~-~~~eql~~iv~aLA~~~A~sl~ 190 (414)
T PF07914_consen 115 REVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVE-NVHSM-D-MYEN-LSVEQLLQIVRALAKFHALSLK 190 (414)
T ss_pred HHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccC-Cceee-c-ccCC-CCHHHHHHHHHHHHHHHHhHcc
Confidence 4555677777763 457999999 77776 899999999 44322 2 2122 3356678889999999988743
No 306
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=93.73 E-value=0.59 Score=36.79 Aligned_cols=107 Identities=16% Similarity=-0.001 Sum_probs=69.3
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
+..+|.|....||++.+. .+ .+++|......-.. .-..++...|.+.|+.+.. |..++-. .+.+.+...+|
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 78 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE----KGSVRNVLNERRILQELNH--PFLVNLWYSFQDEENMYLV 78 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc----hhHHHHHHHHHHHHHhCCC--CChHHHHHhhcCCCeEEEE
Confidence 567899999999999986 34 78888775321100 0124577777777776643 4433322 23356778899
Q ss_pred EecCCCCchHHHHHHHcC-CCCH----HHHHHHHHHHHHHHhc
Q 048614 114 MRYLEPPHIILRKGLIAG-IKYP----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g-~~~~----~~a~~iG~~La~~h~~ 151 (165)
||++. +..|+..+... ...+ .++.+|...|+-+|..
T Consensus 79 ~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~ 119 (258)
T cd05578 79 VDLLL--GGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK 119 (258)
T ss_pred EeCCC--CCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 99997 45777777654 2222 4567788888888864
No 307
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=93.70 E-value=1.6 Score=34.92 Aligned_cols=106 Identities=18% Similarity=0.076 Sum_probs=66.1
Q ss_pred eeEecCCCceeEEEEEEe-----CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614 36 TIKEVGDGNLNFVYIVVG-----SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~ 107 (165)
.++.+|.|....||++.. ..+ .+++|.-..... .....+...|.++|+.+.. | .+++++.+ +.
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~ 78 (283)
T cd05080 8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG------QQNTSGWKKEINILKTLYH--E-NIVKYKGCCSEQ 78 (283)
T ss_pred eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC------hHHHHHHHHHHHHHHhCCC--C-CEeeEEEEEecC
Confidence 567789898888987642 133 688887542211 1223456668778876632 3 44455543 22
Q ss_pred --CCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 108 --TMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 --~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
....++||+++ ...|.+.+..+... -.++.++...|..+|...
T Consensus 79 ~~~~~~lv~e~~~--~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~ 127 (283)
T cd05080 79 GGKGLQLIMEYVP--LGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQH 127 (283)
T ss_pred CCceEEEEecCCC--CCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23569999997 45777776655433 246778888888888654
No 308
>PRK10345 hypothetical protein; Provisional
Probab=93.69 E-value=1.8 Score=34.73 Aligned_cols=108 Identities=13% Similarity=-0.027 Sum_probs=69.1
Q ss_pred eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhcc--CCCCCceEEEEcCCCc---
Q 048614 36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQL--CPDHVPEVYHFDRTMS--- 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~--~p~~vP~v~~~D~~~~--- 110 (165)
+.+.||.|..-.||+ .-.++..|||...+.-. -..+..+.|...|+.+..- .-.++|++|.+-.++.
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~k~IKv~~~~~~-------~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g 77 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQRCIKIVYHRGD-------GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG 77 (210)
T ss_pred CcceecCCCceEEEE-CCCCcCeEEEEEecccc-------chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence 557899999999996 32234567898754211 1346789999999988541 1235888887776662
Q ss_pred e---EEEecCCCCchHHHHHHHcCCCCHH---HHHHHHHHHHHHHhc
Q 048614 111 L---IGMRYLEPPHIILRKGLIAGIKYPL---LAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~---~vMEdL~~~~~~lr~~l~~g~~~~~---~a~~iG~~La~~h~~ 151 (165)
. +||||.+....+|.+.+.++..... +.+.+-.++..+|..
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~ 124 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDN 124 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHC
Confidence 2 6899855336799998877653332 334444444566643
No 309
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=93.68 E-value=0.92 Score=39.43 Aligned_cols=84 Identities=15% Similarity=0.020 Sum_probs=53.0
Q ss_pred eeEecCCCceeEEEEEEeCC------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614 36 TIKEVGDGNLNFVYIVVGSS------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D 106 (165)
-.+.||.|....||++.... + .+.||.-.+..+. ...++...|.++|+.+... |. +++++.+ +
T Consensus 41 ~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~~Ei~~l~~l~~H-pn-Iv~l~~~~~~ 112 (400)
T cd05105 41 LGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS------SEKQALMSELKIMTHLGPH-LN-IVNLLGACTK 112 (400)
T ss_pred hhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh------HHHHHHHHHHHHHHhcCCC-CC-eeeEEEEEcc
Confidence 35778999999999987531 1 4778865433221 1235677788888776532 43 4445443 4
Q ss_pred CCCceEEEecCCCCchHHHHHHH
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLI 129 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~ 129 (165)
.....+||||++ ..+|.+.|.
T Consensus 113 ~~~~~lv~Ey~~--~g~L~~~l~ 133 (400)
T cd05105 113 SGPIYIITEYCF--YGDLVNYLH 133 (400)
T ss_pred CCceEEEEEecC--CCcHHHHHH
Confidence 566899999997 335555443
No 310
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=93.66 E-value=0.61 Score=37.78 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=65.8
Q ss_pred Ccc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC
Q 048614 33 DAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDR 107 (165)
Q Consensus 33 ~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~ 107 (165)
+++ .++.+|.|....||++...+ | .++||+..... ..-...+...|.+.+..... .|. +++++ +.+.
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~------~~~~~~~~~~e~~~~~~~~~-~~~-i~~~~~~~~~~ 86 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG------NKEENKRILMDLDVVLKSHD-CPY-IVKCYGYFITD 86 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC------ChHHHHHHHHHHHHHHhccC-CCc-hHhhheeeecC
Confidence 344 57889999999999999874 5 78888754211 11223344455555544332 233 33333 3367
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCC----CHHHHHHHHHHHHHHHh
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIAGIK----YPLLAEHMSEFMAKTLF 150 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~g~~----~~~~a~~iG~~La~~h~ 150 (165)
....++||+++.....++.... +.. .-.++.+|...|+-+|.
T Consensus 87 ~~~~~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~ 132 (296)
T cd06618 87 SDVFICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKE 132 (296)
T ss_pred CeEEEEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 7788999999743334443322 221 12578888999999995
No 311
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=93.63 E-value=1 Score=44.24 Aligned_cols=109 Identities=16% Similarity=0.136 Sum_probs=68.3
Q ss_pred cc-eeEecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcC--
Q 048614 34 AL-TIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDR-- 107 (165)
Q Consensus 34 ~~-~v~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~-- 107 (165)
++ -+..||.|....||++.+... .+++|.-.... .. .-...+...|..+|+.+.. |..++-+-. ++.
T Consensus 14 ~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~-l~----e~~~~~~~~EI~IL~~L~H--PNIVrl~d~f~de~~ 86 (1021)
T PTZ00266 14 EYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG-LK----EREKSQLVIEVNVMRELKH--KNIVRYIDRFLNKAN 86 (1021)
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccc-cC----HHHHHHHHHHHHHHHHcCC--CCcCeEEEEEEecCC
Confidence 44 567899999999999998643 56777543211 10 1123566778888877653 444443322 333
Q ss_pred CCceEEEecCCCCchHHHHHHHc-----CCCC----HHHHHHHHHHHHHHHhc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIA-----GIKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~-----g~~~----~~~a~~iG~~La~~h~~ 151 (165)
....+||||++ ...|.+.|.. +... -.++.+|...|+-+|..
T Consensus 87 ~~lyIVMEY~~--gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~ 137 (1021)
T PTZ00266 87 QKLYILMEFCD--AGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNL 137 (1021)
T ss_pred CEEEEEEeCCC--CCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 33578999998 3455555543 2222 25778899999999974
No 312
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=93.61 E-value=1.1 Score=37.14 Aligned_cols=108 Identities=14% Similarity=0.009 Sum_probs=62.7
Q ss_pred eeEecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
-+..+|.|....||++..... .+++|.-....... .........|...|+.... | .++.++ +.+.+...
T Consensus 5 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~~~~~~ 77 (332)
T cd05623 5 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK----RAETACFREERDVLVNGDN--Q-WITTLHYAFQDENNLY 77 (332)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHH----hhHHHHHHHHHHHHhhCCC--C-CEeeEEEEEecCCEEE
Confidence 467899999999999987643 67778643211000 0112234445555544322 3 333333 33556678
Q ss_pred EEEecCCCCchHHHHHHHcC-CCC-H----HHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAG-IKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g-~~~-~----~~a~~iG~~La~~h~~t 152 (165)
+||||++ ...|.+.+.+. ... . .++.+|...|..+|...
T Consensus 78 lv~ey~~--~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ 122 (332)
T cd05623 78 LVMDYYV--GGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH 122 (332)
T ss_pred EEEeccC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999997 34777777652 222 2 35567777787777543
No 313
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=93.59 E-value=0.55 Score=36.63 Aligned_cols=102 Identities=19% Similarity=0.146 Sum_probs=61.4
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCC-CCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC--C
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESW-PMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT--M 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~--~ 109 (165)
...+|.|....||++.+. +| .+++|.-.. ..+ .-..++...|...|+.+.. ..+++++. .+.. .
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~------~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~ 75 (265)
T cd08217 5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDY------GNMTEKEKQQLVSEVNILRELKH---PNIVRYYDRIIDRSNQT 75 (265)
T ss_pred eeeeccCCCeEEEEeeecCCCCEEEEEEEec------ccCCHHHHHHHHHHHHHHHhcCC---CccceeeeeeecCCCCE
Confidence 356888988899999876 34 688885321 111 1112455556666665542 34555554 3332 3
Q ss_pred ceEEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHH
Q 048614 110 SLIGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTL 149 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h 149 (165)
..++|||++ ..+|.+.+.. +... -.++.+|...|+.+|
T Consensus 76 ~~~~~e~~~--~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 122 (265)
T cd08217 76 LYIVMEYCE--GGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH 122 (265)
T ss_pred EEEEehhcc--CCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 468999997 3355555543 2221 247788999999999
No 314
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=93.58 E-value=1.5 Score=34.56 Aligned_cols=106 Identities=14% Similarity=0.021 Sum_probs=66.1
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
..+.+|.|....||++.+. ++ .+++|.-..... -.......|..+++.... |..++-. .+.+.+...+
T Consensus 13 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~e~~~~~~l~h--~~ii~~~~~~~~~~~~~l 83 (267)
T cd06645 13 LIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-------EDFAVVQQEIIMMKDCKH--SNIVAYFGSYLRRDKLWI 83 (267)
T ss_pred HHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-------hHHHHHHHHHHHHHhCCC--CCeeeEEEEEEeCCEEEE
Confidence 3456788888899999875 34 788887542211 122445567777766532 3333222 2346677889
Q ss_pred EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||++ ...|.+.+...... -.++.++...|.-+|...
T Consensus 84 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 126 (267)
T cd06645 84 CMEFCG--GGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG 126 (267)
T ss_pred EEeccC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 45776666443322 246677788888888653
No 315
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=93.55 E-value=0.82 Score=37.31 Aligned_cols=107 Identities=13% Similarity=0.053 Sum_probs=65.0
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPE-VYHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~~~~~~ 112 (165)
....+|.|..+.||++... +| .+++|.-....... .-...+...|.+.|+.... |..+.- -++.+.+...+
T Consensus 19 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~----~~~~~~~~~Ei~~l~~l~h--~niv~~~~~~~~~~~~~l 92 (307)
T cd06607 19 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS----NEKWQDIIKEVRFLQQLRH--PNTIEYKGCYLREHTAWL 92 (307)
T ss_pred hheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc----HHHHHHHHHHHHHHHhCCC--CCEEEEEEEEEeCCeEEE
Confidence 5678999999999999875 34 78888653211110 0112355667777776642 332221 13457788899
Q ss_pred EEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhc
Q 048614 113 GMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~ 151 (165)
||||+.. .+.+.+.. +... -.++.+|...|+-+|..
T Consensus 93 v~e~~~g---~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~ 134 (307)
T cd06607 93 VMEYCLG---SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH 134 (307)
T ss_pred EHHhhCC---CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9999973 22232221 2222 24677889999999965
No 316
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=93.50 E-value=1.5 Score=35.04 Aligned_cols=105 Identities=14% Similarity=0.055 Sum_probs=64.9
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD------- 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------- 106 (165)
.++.+|.|....||++.+. .+ .+++|..... .....+...|..+++.+.. ...+.+++.+-
T Consensus 20 ~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~--------~~~~~~~~~e~~~l~~~~~--h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 20 LVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--------EDEEEEIKLEINMLKKYSH--HRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hheeeccCCCeEEEEEEEcCCCcEEEEEEEecC--------hHHHHHHHHHHHHHHHhcC--CCcEEEEeeehhcccccC
Confidence 4578899999999999875 34 7888864211 1123455667777776643 22334444332
Q ss_pred -CCCceEEEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 107 -RTMSLIGMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 -~~~~~~vMEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.+...++|||++ ...+...+... ... -.++.+|...|+.+|...
T Consensus 90 ~~~~~~iv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ 141 (282)
T cd06636 90 HDDQLWLVMEFCG--AGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK 141 (282)
T ss_pred CCCEEEEEEEeCC--CCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 344579999997 34555555432 212 135678899999999764
No 317
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=93.37 E-value=1.2 Score=35.63 Aligned_cols=106 Identities=15% Similarity=0.057 Sum_probs=65.7
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP-EVYHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~~~~~~v 113 (165)
++.+|.|....||++.+. +| .+++|.-..... .. ....+...|.+.|+.+.. |..++ .-++.|.....++
T Consensus 5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~--~~---~~~~~~~~ei~~l~~l~h--~~i~~~~~~~~~~~~~~lv 77 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DE---GVPSSALREICLLKELKH--KNIVRLYDVLHSDKKLTLV 77 (284)
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeecccc--cc---cCccchhHHHHHHHhcCC--CCeeeHHHHhccCCceEEE
Confidence 467899999999999876 45 788886542211 11 112345568888877643 32221 1123466778899
Q ss_pred EecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t 152 (165)
|||++ . .+.+.+.. +... ..++.+|...|+.+|...
T Consensus 78 ~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ 119 (284)
T cd07839 78 FEYCD-Q--DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN 119 (284)
T ss_pred EecCC-C--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99997 2 34454443 2222 356778888888888654
No 318
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=93.36 E-value=0.8 Score=36.76 Aligned_cols=105 Identities=15% Similarity=0.091 Sum_probs=65.2
Q ss_pred eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 048614 36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D 106 (165)
-..++|.|....||++... .+ .+.+|+-..... ........|.+.|+.+.. |. +.+++ ..+
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~ 78 (280)
T cd05092 9 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-------SARQDFQREAELLTVLQH--QH-IVRFYGVCTE 78 (280)
T ss_pred eccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH-------HHHHHHHHHHHHHhcCCC--CC-CceEEEEEec
Confidence 4577888988999998632 23 566676332111 123456677777776643 33 33344 345
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC----------------C----CHHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGI----------------K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~----------------~----~~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++ ...|.+.+.... . .-.++.+|...|+-+|...
T Consensus 79 ~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~ 142 (280)
T cd05092 79 GRPLLMVFEYMR--HGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH 142 (280)
T ss_pred CCceEEEEecCC--CCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 577889999997 346766665432 1 1246678888888888654
No 319
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=93.31 E-value=1.2 Score=41.51 Aligned_cols=109 Identities=14% Similarity=-0.040 Sum_probs=68.0
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~~~~~ 112 (165)
-++.||.|....||++.+. .+ .++||.-...--. -.-...+...|...|+.+.. |..++-.. +.+.....+
T Consensus 8 i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----~~~~~~~~~~E~~~l~~l~h--p~Iv~~~~~~~~~~~~~l 81 (669)
T cd05610 8 IVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----NKNMVHQVQAERDALALSKS--PFIVHLYYSLQSANNVYL 81 (669)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----CHHHHHHHHHHHHHHHhcCC--CCcCeEEEEEEECCEEEE
Confidence 4678999999999999987 34 7889975321100 01123566667777765532 33333222 234567889
Q ss_pred EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
||||+. ...|++.+..... . -.++.+|...|.-+|...
T Consensus 82 VmEy~~--g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~g 124 (669)
T cd05610 82 VMEYLI--GGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG 124 (669)
T ss_pred EEeCCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 3467666654322 1 256778888888888753
No 320
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=93.30 E-value=1.6 Score=34.62 Aligned_cols=106 Identities=20% Similarity=0.173 Sum_probs=65.5
Q ss_pred eeEecCCCceeEEEEEEeCC-------CeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-------GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-------gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D 106 (165)
-...+|.|....||++...+ ..+++|.-..... .........|...|+.+.. | .+.+++. .+
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~------~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~ 80 (277)
T cd05032 10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS------MRERIEFLNEASVMKEFNC--H-HVVRLLGVVST 80 (277)
T ss_pred EEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC------HHHHHHHHHHHHHHHhCCC--C-ceeEEEEEEcC
Confidence 45778989999999988642 2688888432111 1112344556666665432 3 3344543 46
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC---------------CHHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~---------------~~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++ ..+|.+.+..... .-.++.+|...|.-+|...
T Consensus 81 ~~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 139 (277)
T cd05032 81 GQPTLVVMELMA--KGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK 139 (277)
T ss_pred CCCcEEEEecCC--CCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 677899999997 3477776653211 1136678888888888643
No 321
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=93.21 E-value=1.2 Score=35.41 Aligned_cols=104 Identities=15% Similarity=0.083 Sum_probs=65.9
Q ss_pred eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcC
Q 048614 37 IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~ 107 (165)
.+.+|.|....||++... .+ .++||.-.... ..-...+...|+++|+.+.. |. +.++ ++.+.
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~ 80 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA------SNDARKDFEREAELLTNFQH--EN-IVKFYGVCTEG 80 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccC------CHHHHHHHHHHHHHHHhcCC--CC-chheeeEEecC
Confidence 466888888899998753 22 68888653211 11123567778888877643 33 3333 33455
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCC-------------------CHHHHHHHHHHHHHHHhc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIAGIK-------------------YPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~g~~-------------------~~~~a~~iG~~La~~h~~ 151 (165)
....++||+++ ...|++.+..... .-.++.+|...|+.+|..
T Consensus 81 ~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~ 141 (280)
T cd05049 81 DPPIMVFEYME--HGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ 141 (280)
T ss_pred CCeEEEEecCC--CCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC
Confidence 77899999997 3577777754211 123577888888888864
No 322
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=93.20 E-value=1.8 Score=33.65 Aligned_cols=102 Identities=17% Similarity=0.087 Sum_probs=66.7
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v 113 (165)
.+.++.|....||++.... + .+++|.-.... ..++...|.+.++.+.. |..++-. ++.+.....++
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---------~~~~~~~e~~~~~~l~~--~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE---------DLQEIIKEISILKQCDS--PYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH---------HHHHHHHHHHHHHhCCC--CcEeeeeeeeecCCcEEEE
Confidence 4457788888899998764 4 78888643211 15677788888877722 3333222 34566778899
Q ss_pred EecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhc
Q 048614 114 MRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
||+++ ...|++.+.. +... -.++.++...|+.+|..
T Consensus 77 ~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~ 118 (256)
T cd06612 77 MEYCG--AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN 118 (256)
T ss_pred EecCC--CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99998 4577776653 3222 25777888888888854
No 323
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=93.15 E-value=1.3 Score=35.03 Aligned_cols=112 Identities=15% Similarity=0.102 Sum_probs=66.6
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCcccccc-C--CCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCI-G--ESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~-~--~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~ 108 (165)
..+.+|.|...-||++.+. +| .++||.-..-.... . ..+.--.+....|...|+.+.. | .+++++.+ +.+
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~ 81 (272)
T cd06629 5 KGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH--L-NIVQYLGFETTEE 81 (272)
T ss_pred ecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC--C-CcceEEEEeccCC
Confidence 3467899999999999764 45 78888654221110 0 0011112345557667766642 3 34445433 446
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
...+|||+++ ...|.+.+.+.... -.++.+|...|..+|...
T Consensus 82 ~~~lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 128 (272)
T cd06629 82 YLSIFLEYVP--GGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKG 128 (272)
T ss_pred ceEEEEecCC--CCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 6789999997 34666666553322 235678888888888654
No 324
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=93.13 E-value=2.6 Score=33.92 Aligned_cols=109 Identities=15% Similarity=0.078 Sum_probs=67.5
Q ss_pred CCcc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 048614 32 FDAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFD 106 (165)
Q Consensus 32 ~~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D 106 (165)
++.+ -++.+|.|...-||++.+.. + .+++|.-.... .-...+...|...++.... | .+++++ +.+
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~ 80 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-------EEELEDYMVEIEILATCNH--P-YIVKLLGAFYW 80 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-------HHHHHHHHHHHHHHHhCCC--C-cEeeeEEEEEe
Confidence 3444 36679999999999998864 4 67777754221 1123455667777766542 3 344444 346
Q ss_pred CCCceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
.....+||||++. ..+...+.+. ... -.++.+|...|+.+|...
T Consensus 81 ~~~~~lv~e~~~~--~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ 130 (292)
T cd06644 81 DGKLWIMIEFCPG--GAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK 130 (292)
T ss_pred CCeEEEEEecCCC--CcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 6778999999983 3454444331 112 246777788888888643
No 325
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=93.12 E-value=3 Score=32.93 Aligned_cols=106 Identities=15% Similarity=0.001 Sum_probs=65.5
Q ss_pred eeEecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614 36 TIKEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~ 108 (165)
-.+.+|.|....||++.... . .++||...+... .....+...|..+|+.+.. | .+.+++. .+..
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~ 78 (266)
T cd05033 8 IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS------DKQRLDFLTEASIMGQFDH--P-NIIRLEGVVTKSR 78 (266)
T ss_pred eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC------hHHHHHHHHHHHHHHhCCC--C-CcceEeEEEecCC
Confidence 45778999999999987642 2 688887543211 1122344557777766642 3 3444443 3556
Q ss_pred CceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
...++||+++ ..+|.+.+... ... -.++.++...|+.+|...
T Consensus 79 ~~~iv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~ 126 (266)
T cd05033 79 PVMIITEYME--NGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN 126 (266)
T ss_pred ceEEEEEcCC--CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 6789999997 34677766542 222 245677788888888743
No 326
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=92.99 E-value=0.81 Score=36.66 Aligned_cols=103 Identities=18% Similarity=0.202 Sum_probs=65.4
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~ 112 (165)
+..+|.|....||++.+. .| .+++|.-..... .....+...|.+.|+.+.. |. +++++ +.+.....+
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~e~~~l~~~~~--~~-i~~~~~~~~~~~~~~l 76 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD------ESKFNQIIMELDILHKAVS--PY-IVDFYGAFFIEGAVYM 76 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHhcCC--Cc-HHhhhhheecCCeEEE
Confidence 457889999999999886 44 788886532111 0122456678888876532 22 22222 345677789
Q ss_pred EEecCCCCchHHHHHHHcC----CC----CHHHHHHHHHHHHHHHh
Q 048614 113 GMRYLEPPHIILRKGLIAG----IK----YPLLAEHMSEFMAKTLF 150 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g----~~----~~~~a~~iG~~La~~h~ 150 (165)
||||++ ...|...+..+ .. .-.++.+|...|..+|.
T Consensus 77 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 120 (286)
T cd06622 77 CMEYMD--AGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE 120 (286)
T ss_pred EEeecC--CCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999998 34666666553 21 13567788888888884
No 327
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=92.94 E-value=1.5 Score=34.94 Aligned_cols=106 Identities=20% Similarity=0.172 Sum_probs=63.4
Q ss_pred eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614 36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D 106 (165)
-...+|.|....||++... .+ .++||.-..- ..+ -...+...|...|+.+. .|. +.+++.+ +
T Consensus 10 ~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-----~~~-~~~~~~~~e~~~l~~l~--~~~-iv~~~~~~~~ 80 (277)
T cd05062 10 MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-----ASM-RERIEFLNEASVMKEFN--CHH-VVRLLGVVSQ 80 (277)
T ss_pred eeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-----CCH-HHHHHHHHHHHHHHhCC--CCC-eeeEEEEEcC
Confidence 3577899999999987643 22 5888763211 111 11223455666666543 243 4444543 4
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC---------------CHHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~---------------~~~~a~~iG~~La~~h~~t 152 (165)
.....+||||++ ..+|.+.+.+... .-.++.++...|+.+|...
T Consensus 81 ~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 139 (277)
T cd05062 81 GQPTLVIMELMT--RGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK 139 (277)
T ss_pred CCCeEEEEecCC--CCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 456788999998 3466666654211 1246778899999999754
No 328
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=92.94 E-value=1.6 Score=37.84 Aligned_cols=104 Identities=17% Similarity=0.033 Sum_probs=70.7
Q ss_pred EecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC--ceEEE
Q 048614 38 KEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM--SLIGM 114 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~--~~~vM 114 (165)
..+|.|-...|||....+| .|.||.-.+.. ... ......|.+.|..++ . |..|+=+=++.+.. .++|.
T Consensus 81 ~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~------~~~-~~eF~~Ei~~ls~l~-H-~Nlv~LlGyC~e~~~~~~LVY 151 (361)
T KOG1187|consen 81 NLIGEGGFGTVYKGVLSDGTVVAVKRLSSNS------GQG-EREFLNEVEILSRLR-H-PNLVKLLGYCLEGGEHRLLVY 151 (361)
T ss_pred cceecCCCeEEEEEEECCCCEEEEEEecCCC------Ccc-hhHHHHHHHHHhcCC-C-cCcccEEEEEecCCceEEEEE
Confidence 4677777889999999987 89999332221 111 223777777776665 2 55555433344333 69999
Q ss_pred ecCCCCchHHHHHHHcCCC-------CHHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIK-------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~-------~~~~a~~iG~~La~~h~~t 152 (165)
||.+ ++ +|.+.|..... .-.+|..++..|+-+|...
T Consensus 152 Eym~-nG-sL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~ 194 (361)
T KOG1187|consen 152 EYMP-NG-SLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGC 194 (361)
T ss_pred EccC-CC-CHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCC
Confidence 9999 44 78777665442 3479999999999999866
No 329
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=92.94 E-value=1.7 Score=35.64 Aligned_cols=107 Identities=14% Similarity=-0.008 Sum_probs=68.7
Q ss_pred eeEecCCCceeEEEEEEeC--------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--
Q 048614 36 TIKEVGDGNLNFVYIVVGS--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-- 104 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-- 104 (165)
-...+|.|....||++... .+ .+.+|....... .-...+...|.+.|+..... | .+.+++.
T Consensus 16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~-~iv~~~~~~ 87 (314)
T cd05099 16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT------DKDLADLISEMELMKLIGKH-K-NIINLLGVC 87 (314)
T ss_pred eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC------hHHHHHHHHHHHHHHhccCC-C-CeeeEEEEE
Confidence 5678999999999999742 12 577887553221 11234666777777766432 3 3444553
Q ss_pred EcCCCceEEEecCCCCchHHHHHHHcCC----------------CC-----HHHHHHHHHHHHHHHhcc
Q 048614 105 FDRTMSLIGMRYLEPPHIILRKGLIAGI----------------KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 105 ~D~~~~~~vMEdL~~~~~~lr~~l~~g~----------------~~-----~~~a~~iG~~La~~h~~t 152 (165)
.+.....++|||++ ...|.+.+.... .. -.++.+|...|..+|...
T Consensus 88 ~~~~~~~lv~e~~~--~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g 154 (314)
T cd05099 88 TQEGPLYVIVEYAA--KGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR 154 (314)
T ss_pred ccCCceEEEEecCC--CCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 35566789999997 347777775532 11 135778999999999754
No 330
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=92.89 E-value=0.9 Score=38.01 Aligned_cols=85 Identities=13% Similarity=0.033 Sum_probs=51.6
Q ss_pred eeEecCCCceeEEEEEEe------CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-E-c
Q 048614 36 TIKEVGDGNLNFVYIVVG------SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-F-D 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~-D 106 (165)
-.+.||.|....||++.. ..+ .+.||+-..... .-...+...|.++|+.+... |. +.+++. + +
T Consensus 11 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~n-iv~~~~~~~~ 82 (343)
T cd05103 11 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT------HSEHRALMSELKILIHIGHH-LN-VVNLLGACTK 82 (343)
T ss_pred ccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC------hHHHHHHHHHHHHHHhccCC-cc-Hhhhcceeec
Confidence 467799999999999963 234 688887642211 01124566788888776432 33 333332 3 2
Q ss_pred C-CCceEEEecCCCCchHHHHHHHc
Q 048614 107 R-TMSLIGMRYLEPPHIILRKGLIA 130 (165)
Q Consensus 107 ~-~~~~~vMEdL~~~~~~lr~~l~~ 130 (165)
+ ....++|||++ ..+|.+.+..
T Consensus 83 ~~~~~~lv~ey~~--~g~L~~~i~~ 105 (343)
T cd05103 83 PGGPLMVIVEFCK--FGNLSNYLRS 105 (343)
T ss_pred CCCceEEEEeccC--CCcHHHHHHh
Confidence 2 34578999998 3466665543
No 331
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=92.89 E-value=1 Score=36.37 Aligned_cols=105 Identities=16% Similarity=0.110 Sum_probs=66.1
Q ss_pred eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 048614 36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D 106 (165)
-...+|.|...-||++... ++ .+++|.-.-.. .-...+...|.++|+.+.. |. +++++ +.+
T Consensus 9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~ 78 (288)
T cd05093 9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-------DNARKDFHREAELLTNLQH--EH-IVKFYGVCVE 78 (288)
T ss_pred eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-------HHHHHHHHHHHHHHHhCCC--CC-cceEEEEEec
Confidence 4567899999999999752 22 46667553111 1123456678888876642 43 33443 346
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC--------------CC----HHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGI--------------KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~--------------~~----~~~a~~iG~~La~~h~~t 152 (165)
.....++|||.+ ...|.+.+.... .. -.++.+|...|+.+|...
T Consensus 79 ~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~ 140 (288)
T cd05093 79 GDPLIMVFEYMK--HGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH 140 (288)
T ss_pred CCccEEEEEcCC--CCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 678899999997 447766665321 11 246778888898888765
No 332
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=92.88 E-value=1.8 Score=34.78 Aligned_cols=109 Identities=13% Similarity=-0.072 Sum_probs=59.6
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccC-CCCCceEE-EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLC-PDHVPEVY-HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~-p~~vP~v~-~~D~~~~~ 111 (165)
.++.+|.|....||++... +| .+.+|.+.-.+... . -.-...+...|...++ .+- |. +.+++ .+......
T Consensus 11 ~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~-~~~~~~~~~~~~~~l~---~l~h~~-iv~~~~~~~~~~~~ 84 (279)
T cd05111 11 KLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-S-GRQTFQEITDHMLAMG---SLDHAY-IVRLLGICPGASLQ 84 (279)
T ss_pred eccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-c-chHHHHHHHHHHHHHh---cCCCCC-cceEEEEECCCccE
Confidence 4567899999999999864 23 33333332222110 0 0011122222222332 332 43 33444 33445567
Q ss_pred EEEecCCCCchHHHHHHHcC-CC-C----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAG-IK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g-~~-~----~~~a~~iG~~La~~h~~t 152 (165)
++||+++ ..+|.+.+... .. . -.++.+|...|+-+|...
T Consensus 85 ~i~e~~~--~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 129 (279)
T cd05111 85 LVTQLSP--LGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR 129 (279)
T ss_pred EEEEeCC--CCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 8999998 34777777542 21 1 257889999999999754
No 333
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=92.83 E-value=2.5 Score=33.95 Aligned_cols=106 Identities=16% Similarity=0.089 Sum_probs=64.1
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EE--------
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HF-------- 105 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~-------- 105 (165)
...+|.|....||++... +| .++||........ .-.......|.++++.+.. |..++-.- ..
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-----~~~~~~~~~e~~~~~~l~h--~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-----EGFPITAIREIKILRQLNH--RNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred eeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-----cCchHHHHHHHHHHHhCCC--CCeeeeeheecCcchhhhc
Confidence 467888999999999986 34 7888975433211 1122345567778877642 43333111 11
Q ss_pred --cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614 106 --DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 --D~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
+.....++|||++ . .+...+.... .. -.++.+|...|+.+|...
T Consensus 85 ~~~~~~~~lv~e~~~-~--~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 136 (302)
T cd07864 85 KKDKGAFYLVFEYMD-H--DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN 136 (302)
T ss_pred cccCCcEEEEEcccC-c--cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 2235789999997 2 3444454432 11 256778888899888553
No 334
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=92.80 E-value=1.2 Score=35.13 Aligned_cols=108 Identities=13% Similarity=0.101 Sum_probs=64.8
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP-EVYHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~~~~~~v 113 (165)
.+.+|.|....||++... +| .++||.-...-.. . .-...+...|...|+.... |..++ .-++.+.....++
T Consensus 7 ~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~-~---~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 7 EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM-D---AKARADCIKEIDLLKQLNH--PNVIKYYASFIEDNELNIV 80 (267)
T ss_pred hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhh-h---HHHHHHHHHHHHHHHHccC--CchhhhhheeEeCCeEEEE
Confidence 356788888899999864 45 8889954421100 0 0112355567777776642 33222 1234466778899
Q ss_pred EecCCCCchHHHHHHHc----CCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIA----GIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~----g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|++.+.. +...+ .++.+|...|+.+|...
T Consensus 81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 126 (267)
T cd08229 81 LELAD--AGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR 126 (267)
T ss_pred EEecC--CCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99997 3456655532 22222 45778899999999654
No 335
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=92.76 E-value=2 Score=35.89 Aligned_cols=104 Identities=16% Similarity=0.179 Sum_probs=65.3
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-------- 105 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------- 105 (165)
.++++|.|....||++.+. .| .+++|.-...- . -.......|.++|+.+.. |. +.+++.+
T Consensus 9 ~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~----~---~~~~~~~~Ei~~l~~l~h--~~-i~~~~~~~~~~~~~~ 78 (342)
T cd07854 9 DLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD----P---QSVKHALREIKIIRRLDH--DN-IVKVYEVLGPSGSDL 78 (342)
T ss_pred EEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC----C---chHHHHHHHHHHHHhcCC--Cc-chhhHhhhccccccc
Confidence 5788999999999999875 34 78888653111 1 122445567788876643 32 2322211
Q ss_pred --------cCCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614 106 --------DRTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 --------D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
+.....++||+++ . .+++.+..+.... .++.+|...|.-+|...
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~-~--~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g 134 (342)
T cd07854 79 TEDVGSLTELNSVYIVQEYME-T--DLANVLEQGPLSEEHARLFMYQLLRGLKYIHSAN 134 (342)
T ss_pred ccccccccccceEEEEeeccc-c--cHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1124569999997 2 5777666655332 45678888888888654
No 336
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=92.58 E-value=1.6 Score=38.85 Aligned_cols=103 Identities=17% Similarity=0.084 Sum_probs=66.9
Q ss_pred EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 048614 38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~v 113 (165)
++||.|-.-.||+..-. ++ .|.||--.-.- - -+-.++=...|..+|+.+. -.++-.++.+ +++...+|
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~----l-~~k~~e~L~~Ei~iLkel~---H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKK----L-NKKLVELLLSEIKILKELK---HPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhhc----c-CHHHHHHHHHHHHHHHhcC---CcceeeEEEEEecCCeEEEE
Confidence 44999999999999876 34 78887644210 0 1112233467777888776 3344444443 56788899
Q ss_pred EecCCCCchHHHHHHHcC-CCCH----HHHHHHHHHHHHHHh
Q 048614 114 MRYLEPPHIILRKGLIAG-IKYP----LLAEHMSEFMAKTLF 150 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g-~~~~----~~a~~iG~~La~~h~ 150 (165)
||||. +.+|-..+.+. ...+ .+..||+..|.-+|.
T Consensus 88 MEyC~--gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~ 127 (429)
T KOG0595|consen 88 MEYCN--GGDLSDYIRRRGRLPEATARHFMQQLASALQFLHE 127 (429)
T ss_pred EEeCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99998 45777777765 3333 456677777777764
No 337
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=92.55 E-value=0.53 Score=43.22 Aligned_cols=126 Identities=16% Similarity=0.115 Sum_probs=85.6
Q ss_pred cceeEecCCCceeEEEEEEeCCC-eEEEeecCcccccc------------------CCCCC----CC--hHHHHHHHHHH
Q 048614 34 ALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCI------------------GESWP----MT--KERAYFEALAL 88 (165)
Q Consensus 34 ~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~------------------~~~~~----l~--~~R~~~E~~~L 88 (165)
..+=++++--.+--|+|..+.+| .|+||-=.|-++.. -|+.. .+ .++...|-.++
T Consensus 163 ~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~ 242 (538)
T KOG1235|consen 163 EFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFT 242 (538)
T ss_pred hcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchH
Confidence 44556777777788999999989 89999999987641 12211 11 11222232233
Q ss_pred HHh----------hccC---CCCCceEEEEcCCCceEEEecCCC-CchHHHHHHHcCCCCH-HHHHHHHHHHHHHHhccc
Q 048614 89 KEH----------GQLC---PDHVPEVYHFDRTMSLIGMRYLEP-PHIILRKGLIAGIKYP-LLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 89 ~~~----------~~~~---p~~vP~v~~~D~~~~~~vMEdL~~-~~~~lr~~l~~g~~~~-~~a~~iG~~La~~h~~ts 153 (165)
+++ .... +..||+||-.--...+++|||+.+ .-.++ +.|.+..+.| +++..++++.+..-|.+.
T Consensus 243 ~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl-~~i~~~gi~~~~i~~~l~~~~~~qIf~~G 321 (538)
T KOG1235|consen 243 KEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDL-DAIDKRGISPHDILNKLVEAYLEQIFKTG 321 (538)
T ss_pred HHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCH-HHHHHcCCCHHHHHHHHHHHHHHHHHhcC
Confidence 332 2222 457999998888899999999985 22233 5555555554 899999999999999999
Q ss_pred ccccCch
Q 048614 154 LLYRTTT 160 (165)
Q Consensus 154 d~~l~~~ 160 (165)
-|+-++.
T Consensus 322 ffHaDPH 328 (538)
T KOG1235|consen 322 FFHADPH 328 (538)
T ss_pred CccCCCC
Confidence 8887763
No 338
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=92.42 E-value=2.1 Score=34.44 Aligned_cols=104 Identities=19% Similarity=0.105 Sum_probs=64.4
Q ss_pred EecCCCceeEEEEEEeCC-----C--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614 38 KEVGDGNLNFVYIVVGSS-----G--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT 108 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~-----g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~ 108 (165)
+.+|.|....||++.+.. + .+.+|.-....-. -...+...|...|+.+.. |.. .+++. .+.+
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~E~~~l~~l~h--~~i-v~~~~~~~~~~ 76 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS------SELRDLLSEFNLLKQVNH--PHV-IKLYGACSQDG 76 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH------HHHHHHHHHHHHHhhCCC--CCE-eeEEEEEecCC
Confidence 567888888899987641 1 4666655422110 112466678777776642 433 33433 3557
Q ss_pred CceEEEecCCCCchHHHHHHHcCCC-----------------------------CHHHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIK-----------------------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~-----------------------------~~~~a~~iG~~La~~h~~t 152 (165)
...++|||++ ...|++.+..... .-.++.++...|.-+|...
T Consensus 77 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 147 (290)
T cd05045 77 PLLLIVEYAK--YGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK 147 (290)
T ss_pred CcEEEEEecC--CCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 7889999997 4577777654321 0256778888888888654
No 339
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=92.42 E-value=2 Score=34.43 Aligned_cols=107 Identities=14% Similarity=0.148 Sum_probs=62.5
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
....+|.|....||++.+.. | .+.+|+-..... .-...+...|...|...... | .+++++ .+++....
T Consensus 8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~e~~~l~~~~~~-~-~iv~~~~~~~~~~~~~ 79 (288)
T cd06616 8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD------EKEQKRLLMDLDVVMRSSDC-P-YIVKFYGALFREGDCW 79 (288)
T ss_pred HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC------hHHHHHHHHHHHHHHHhcCC-C-CEeeeeeEEecCCcEE
Confidence 34578899999999998763 4 788897442111 11233455566566554321 3 344444 45677888
Q ss_pred EEEecCCCCchHHHHHHHc---CCCC----HHHHHHHHHHHHHHHh
Q 048614 112 IGMRYLEPPHIILRKGLIA---GIKY----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~---g~~~----~~~a~~iG~~La~~h~ 150 (165)
++||+++.....+...+.. +... ..++.++...|+-+|.
T Consensus 80 ~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 125 (288)
T cd06616 80 ICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE 125 (288)
T ss_pred EEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 9999987433344333221 2222 2466677777777774
No 340
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=92.42 E-value=1.3 Score=36.96 Aligned_cols=107 Identities=13% Similarity=0.075 Sum_probs=66.7
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC----
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRT---- 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~---- 108 (165)
.+..+|.|....||++.+.. + .++||.-..-.. -.-...+...|..+|+.+.. |..++-. ++.+.+
T Consensus 19 ~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 19 NLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-----SAIHAKRTYRELRLLKHMDH--ENVIGLLDVFTPASSLED 91 (343)
T ss_pred EEEEeccCCceEEEEEEECCCCcEEEEEecccccc-----hhhHHHHHHHHHHHHHhccC--CCHHHHHHHhhccccccc
Confidence 57889999999999998863 4 788886432110 01223556678888776632 3333221 112222
Q ss_pred --CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 109 --MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 --~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
...+|||+++. .|.+.+..+... -.++.+|...|+.+|...
T Consensus 92 ~~~~~lv~e~~~~---~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g 138 (343)
T cd07851 92 FQDVYLVTHLMGA---DLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAG 138 (343)
T ss_pred cccEEEEEecCCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 26899999972 566666554432 246778888888888754
No 341
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=92.39 E-value=3.5 Score=33.41 Aligned_cols=101 Identities=17% Similarity=0.077 Sum_probs=61.3
Q ss_pred EecCCCceeEEEEEEeCC---C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cCCCc
Q 048614 38 KEVGDGNLNFVYIVVGSS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF---DRTMS 110 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~~~~ 110 (165)
..+|.|....||++...+ + .+++|+-.. ..+ ..+...|.++|+.+.. |..++-.-.+ +....
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~------~~~---~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 75 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEG------TGI---SMSACREIALLRELKH--PNVIALQKVFLSHSDRKV 75 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecC------CCC---cHHHHHHHHHHHhCCC--CCeeeEEEEEeccCCCeE
Confidence 568999999999998642 2 688886532 111 1356678888877643 4433322222 33456
Q ss_pred eEEEecCCCCchHHHHHHHcC----------CC----CHHHHHHHHHHHHHHHhcc
Q 048614 111 LIGMRYLEPPHIILRKGLIAG----------IK----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g----------~~----~~~~a~~iG~~La~~h~~t 152 (165)
.++|||++. .+.+.+... .. .-.++.+|...|.-+|...
T Consensus 76 ~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ 128 (317)
T cd07867 76 WLLFDYAEH---DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW 128 (317)
T ss_pred EEEEeeeCC---cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 799999973 333333211 01 1246778889999998753
No 342
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=92.39 E-value=2.3 Score=35.64 Aligned_cols=111 Identities=21% Similarity=0.204 Sum_probs=75.2
Q ss_pred cc-eeEecCCCceeEEEEEEeCCC---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhcc-CCCCCceEEEEc--
Q 048614 34 AL-TIKEVGDGNLNFVYIVVGSSG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQL-CPDHVPEVYHFD-- 106 (165)
Q Consensus 34 ~~-~v~~l~~Gn~N~v~rv~~~~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~-~p~~vP~v~~~D-- 106 (165)
.+ -...+|.|-...||.|.+.+. .+++|--...... .+ .+...|..+|..+... -+..+|.++..-
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~------~~-~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~ 91 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGS------KP-SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRS 91 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccC------CC-ccchhHHHHHHHHhhhcCCCCCCEEEEeccC
Confidence 45 678899999999999998753 3555544433221 12 2778899999998862 245889998776
Q ss_pred -CCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 048614 107 -RTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 107 -~~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~ 151 (165)
..-+.+||+-++++...+|...-.++.-. .+|.++...|-.+|..
T Consensus 92 ~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~ 141 (322)
T KOG1164|consen 92 TEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK 141 (322)
T ss_pred CCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc
Confidence 34579999999976666665444233222 4666777777767753
No 343
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=92.30 E-value=0.59 Score=36.80 Aligned_cols=109 Identities=19% Similarity=0.077 Sum_probs=62.0
Q ss_pred EecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceEEE
Q 048614 38 KEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP-EVYHFDRTMSLIGM 114 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~~~~~~vM 114 (165)
+.+|.|....||++.+... ...+|........ ..-+-...+...|+.+++.+.. |..++ .-+..+.+...++|
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVG--ELNPNETVQANQEAQLLSKLDH--PAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEecccccc--ccCcchHHHHHHHHHHHHhCCC--CcHHHHHHHHhcCCceEEEE
Confidence 6789999999999987632 3444443322210 1011223455667777766542 33221 12345677788999
Q ss_pred ecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++. ..|...+.. +... -.++.++...|..+|...
T Consensus 82 e~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (260)
T cd08222 82 EYCEG--RDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR 126 (260)
T ss_pred EeCCC--CCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence 99983 345444321 2222 245677888888888653
No 344
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=92.29 E-value=0.71 Score=44.15 Aligned_cols=99 Identities=12% Similarity=0.037 Sum_probs=64.1
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~ 112 (165)
...+|.|....||++... +| .++||....... ....|.+.|+.+ --..+.+++.+ +.+...+
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~l~~l---~HpnIv~~~~~~~~~~~~~l 760 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----------IPSSEIADMGKL---QHPNIVKLIGLCRSEKGAYL 760 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----------ccHHHHHHHhhC---CCCCcceEEEEEEcCCCCEE
Confidence 346899999999999874 45 899996432110 112344455443 33345556654 5667789
Q ss_pred EEecCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHhc
Q 048614 113 GMRYLEPPHIILRKGLIAG--IKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g--~~~~~~a~~iG~~La~~h~~ 151 (165)
||||++ ...|.+.+..- ...-.++.+|+..|+-+|..
T Consensus 761 v~Ey~~--~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~ 799 (968)
T PLN00113 761 IHEYIE--GKNLSEVLRNLSWERRRKIAIGIAKALRFLHCR 799 (968)
T ss_pred EEeCCC--CCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccC
Confidence 999997 45777766431 11236888999999999954
No 345
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=92.29 E-value=1.9 Score=34.50 Aligned_cols=98 Identities=15% Similarity=0.093 Sum_probs=60.8
Q ss_pred ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM 114 (165)
.+|.|....||.+... ++ .+++|.-.+.. + ...|....+.... .| .+++++. .+.+...+||
T Consensus 23 ~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~------~------~~~e~~~~~~~~~-h~-~iv~~~~~~~~~~~~~iv~ 88 (267)
T PHA03390 23 KLIDGKFGKVSVLKHKPTQKLFVQKIIKAKN------F------NAIEPMVHQLMKD-NP-NFIKLYYSVTTLKGHVLIM 88 (267)
T ss_pred eecCCCceEEEEEEEcCCCcEEEEEEEehhh------c------chhhHHHHHHhhc-CC-CEEEEEEEEecCCeeEEEE
Confidence 4799999999999875 34 67767643211 0 0113333322222 13 3444443 3667899999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ ..+|.+.+..+... -.++.+|...|+.+|..+
T Consensus 89 e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 129 (267)
T PHA03390 89 DYIK--DGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHN 129 (267)
T ss_pred EcCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9997 35787777665332 247778888888888765
No 346
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=92.26 E-value=2.2 Score=34.82 Aligned_cols=105 Identities=16% Similarity=0.162 Sum_probs=66.3
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~ 111 (165)
....+|.|....||++.+. ++ .+++|.-.. +. ....++...|...|+.+.. |. +++++ +.+.+...
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~--~~-----~~~~~~~~~e~~~l~~l~h--p~-i~~~~~~~~~~~~~~ 94 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDL--RK-----QQRRELLFNEVVIMRDYQH--QN-VVEMYKSYLVGEELW 94 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEe--cc-----cchHHHHHHHHHHHHhCCC--Cc-hhhhhhheeeCCeEE
Confidence 3446899999999999875 34 799996421 11 1123455566666655432 33 33333 44667889
Q ss_pred EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
++||+++ + ..+...+..+... ..++.++...|+.+|...
T Consensus 95 iv~e~~~-~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 137 (297)
T cd06659 95 VLMEFLQ-G-GALTDIVSQTRLNEEQIATVCESVLQALCYLHSQG 137 (297)
T ss_pred EEEecCC-C-CCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 3 4566655443322 246788888888888664
No 347
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=92.25 E-value=2.1 Score=34.82 Aligned_cols=97 Identities=6% Similarity=-0.100 Sum_probs=60.6
Q ss_pred EEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEecCCCCchHHH
Q 048614 47 FVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMRYLEPPHIILR 125 (165)
Q Consensus 47 ~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vMEdL~~~~~~lr 125 (165)
+|++....+..++||.-..... ..-..++...|.+.|+.+.. |..++-+ ++.+.+...++|||++ +..++
T Consensus 17 ~~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~Ei~~l~~l~h--~~i~~~~~~~~~~~~~~~~~e~~~--~~~l~ 87 (314)
T cd08216 17 HLAKHKPTNTLVAVKKINLDSC-----SKEDLKLLQQEIITSRQLQH--PNILPYVTSFIVDSELYVVSPLMA--YGSCE 87 (314)
T ss_pred EEEEecCCCCEEEEEEEecccc-----chhHHHHHHHHHHHHHhcCC--cchhhhhheeecCCeEEEEEeccC--CCCHH
Confidence 4444444333888888643211 12355788899999988753 4433322 4556778899999998 45676
Q ss_pred HHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 126 KGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 126 ~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
..+... ... ..++.++...|+-+|...
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ 121 (314)
T cd08216 88 DLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG 121 (314)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 666542 111 246778888888888754
No 348
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=92.21 E-value=0.63 Score=36.76 Aligned_cols=104 Identities=14% Similarity=0.009 Sum_probs=62.6
Q ss_pred ecCCCceeEEEEEEeCC-------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCC
Q 048614 39 EVGDGNLNFVYIVVGSS-------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTM 109 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~~-------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~ 109 (165)
.+|.|....||++...+ + .++||.-..... .-...+...|...|+.+.. |..++-+ +..+.+.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~ 73 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT------DQEKKEFLKEAHLMSNFNH--PNIVKLLGVCLLNEP 73 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccc------hhhHHHHHHHHHHHHhcCC--CCeeeEeeeecCCCC
Confidence 47888888999987631 1 466675321110 1123455667777766532 4333322 3456677
Q ss_pred ceEEEecCCCCchHHHHHHHcCC-------C-----CHHHHHHHHHHHHHHHhcc
Q 048614 110 SLIGMRYLEPPHIILRKGLIAGI-------K-----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g~-------~-----~~~~a~~iG~~La~~h~~t 152 (165)
..++||+++ ...|.+.+.+.. . .-.++.+|...|+-+|...
T Consensus 74 ~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (269)
T cd05044 74 QYIIMELME--GGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH 126 (269)
T ss_pred eEEEEeccC--CCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 899999997 346766665421 1 1246778888888888653
No 349
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=92.19 E-value=0.96 Score=35.82 Aligned_cols=106 Identities=17% Similarity=0.063 Sum_probs=69.8
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEE
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPE-VYHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~~~~~~v 113 (165)
+..+|.|....||++.... + .+++|.-..... ..--......|.++|+.+. .|..++- -+..+.+...+|
T Consensus 4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~~v 76 (282)
T cd07829 4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-----EEGIPSTALREISLLKELK--HPNIVKLLDVIHTERKLYLV 76 (282)
T ss_pred ehcccccCcceEEEeeecCCCcEEEEEEeccccc-----cccccHHHHHHHHHHHhcC--CCCHHHHHhhhhcCCceEEE
Confidence 3457888889999998874 4 788887664431 0112345667888888775 2333221 133466789999
Q ss_pred EecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
||+.+ . .|++.+.+. ... -.++.++...|+.+|...
T Consensus 77 ~e~~~-~--~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 118 (282)
T cd07829 77 FEYCD-M--DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR 118 (282)
T ss_pred ecCcC-c--CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99997 2 577777665 222 246778888889898764
No 350
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=92.10 E-value=1.3 Score=35.75 Aligned_cols=104 Identities=18% Similarity=0.125 Sum_probs=63.8
Q ss_pred eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC
Q 048614 37 IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~ 107 (165)
...+|.|..+-||++... .+ .+.+|...... .-.......|.+.|+.... | .+.+++ ..+.
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~ 79 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-------LAARKDFQREAELLTNLQH--E-HIVKFYGVCGDG 79 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-------HHHHHHHHHHHHHHhcCCC--C-CcceEEEEEccC
Confidence 467888988999999743 12 36666643211 1112344556666665532 3 334443 3345
Q ss_pred CCceEEEecCCCCchHHHHHHHcCC-----------------C----CHHHHHHHHHHHHHHHhcc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIAGI-----------------K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~g~-----------------~----~~~~a~~iG~~La~~h~~t 152 (165)
+...+||||++ ..+|.+.+..+. . .-.++.+|...|+.+|...
T Consensus 80 ~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 143 (291)
T cd05094 80 DPLIMVFEYMK--HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH 143 (291)
T ss_pred CceEEEEecCC--CCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 66799999997 347777665421 1 1257788999999998765
No 351
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=92.06 E-value=4.9 Score=31.89 Aligned_cols=105 Identities=11% Similarity=-0.003 Sum_probs=65.0
Q ss_pred eEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC
Q 048614 37 IKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTM 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~ 109 (165)
.+.+|.|....||++... .+ .+.+|.-..... .-...+...|...|+.+. -..+++++.+ +.+.
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~------~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~ 80 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS------DKQRRGFLAEALTLGQFD---HSNIVRLEGVITRGNT 80 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC------HHHHHHHHHHHHHHhcCC---CCCcCeEEEEEecCCC
Confidence 356899999999998653 22 577777653211 011234455666665542 2345555544 5567
Q ss_pred ceEEEecCCCCchHHHHHHHcCC-C-C----HHHHHHHHHHHHHHHhcc
Q 048614 110 SLIGMRYLEPPHIILRKGLIAGI-K-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g~-~-~----~~~a~~iG~~La~~h~~t 152 (165)
..+||||++ ...|.+.+.+.. . . -.++.+|...|+.+|...
T Consensus 81 ~~lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ 127 (266)
T cd05064 81 MMIVTEYMS--NGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG 127 (266)
T ss_pred cEEEEEeCC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 889999998 347777666532 2 1 256778888888898654
No 352
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=92.05 E-value=2.6 Score=33.09 Aligned_cols=105 Identities=16% Similarity=0.087 Sum_probs=63.1
Q ss_pred EecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CC--
Q 048614 38 KEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RT-- 108 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~-- 108 (165)
+.+|.|....||++.... + .++||....... -.-..++...|.+.|+.... |. +.+++.+. .+
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~~-iv~~~~~~~~~~~~ 76 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-----TYSEIEEFLSEAACMKDFDH--PN-VMKLIGVCFEASSL 76 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-----CHHHHHHHHHHHHHHHhCCC--CC-eeeEEeeeccCCcc
Confidence 567889999999987642 2 588886432111 01123466777777776542 43 34444322 22
Q ss_pred ----CceEEEecCCCCchHHHHHHHcC------CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 109 ----MSLIGMRYLEPPHIILRKGLIAG------IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ----~~~~vMEdL~~~~~~lr~~l~~g------~~~-----~~~a~~iG~~La~~h~~t 152 (165)
...++|||+. +..|...+... ... -.++.++...|+.+|...
T Consensus 77 ~~~~~~~~v~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~ 133 (273)
T cd05035 77 QKIPKPMVILPFMK--HGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN 133 (273)
T ss_pred ccCcccEEEEeccC--CCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 2589999997 44666555331 111 236788889999998754
No 353
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=91.99 E-value=2.6 Score=34.46 Aligned_cols=108 Identities=13% Similarity=0.064 Sum_probs=64.3
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~ 112 (165)
.+..+|.|....||++.+.. + .++||+....... . .-...+...|.+.|+.+.. |..++-. ++.+.....+
T Consensus 19 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~--~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~l 92 (308)
T cd06634 19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--S--NEKWQDIIKEVRFLQKLRH--PNTIQYRGCYLREHTAWL 92 (308)
T ss_pred HHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc--C--hHHHHHHHHHHHHHHhCCC--CCcccEEEEEEcCCeeEE
Confidence 46678888888999998763 4 6888866422111 0 0112355667777877642 4433332 3457778889
Q ss_pred EEecCCCCchHHHHHHH-cCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLI-AGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~-~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||||+. + .+...+. .+... -.++.++...|..+|...
T Consensus 93 v~e~~~-~--~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~ 135 (308)
T cd06634 93 VMEYCL-G--SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 135 (308)
T ss_pred EEEccC-C--CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 3 2333332 23222 134556777777788643
No 354
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=91.89 E-value=1.3 Score=37.70 Aligned_cols=84 Identities=17% Similarity=0.019 Sum_probs=51.6
Q ss_pred eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 048614 36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D 106 (165)
-.+.+|.|....||++... ++ .+.||....-.. .-..++...|.++|+.+... |. +++++. .+
T Consensus 42 ~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~il~~l~~h-~n-Iv~~~~~~~~ 113 (374)
T cd05106 42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH------TDEREALMSELKILSHLGQH-KN-IVNLLGACTH 113 (374)
T ss_pred ehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC------HHHHHHHHHHHHHHHhhccC-Cc-eeeEeeEecC
Confidence 4678999999999998742 22 577777653221 11235666788888766332 33 344443 34
Q ss_pred CCCceEEEecCCCCchHHHHHHH
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLI 129 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~ 129 (165)
.....+||||++ . .+|.+.+.
T Consensus 114 ~~~~~lv~ey~~-~-g~L~~~l~ 134 (374)
T cd05106 114 GGPVLVITEYCC-Y-GDLLNFLR 134 (374)
T ss_pred CCCeEEeHhhcc-C-CcHHHHHH
Confidence 566789999997 3 35555543
No 355
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=91.83 E-value=2.4 Score=34.35 Aligned_cols=106 Identities=17% Similarity=0.076 Sum_probs=65.4
Q ss_pred eEecCCCceeEEEEEEeCC-C---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCc
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~ 110 (165)
...+|.|....||++.+.+ + .+.+|........ ....+...|.+.++.+... |..+ +++.+ +....
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~E~~~l~~l~~h-p~iv-~~~~~~~~~~~~ 78 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASE------NDHRDFAGELEVLCKLGHH-PNII-NLLGACENRGYL 78 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCH------HHHHHHHHHHHHHHhhcCC-Cchh-heEEEEccCCcc
Confidence 4578999999999997653 2 3566654432221 1234666777777666432 4433 34433 44556
Q ss_pred eEEEecCCCCchHHHHHHHcCC-----------------C----CHHHHHHHHHHHHHHHhcc
Q 048614 111 LIGMRYLEPPHIILRKGLIAGI-----------------K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~-----------------~----~~~~a~~iG~~La~~h~~t 152 (165)
.++|||.+ ...|.+.+.... . .-.++.+|...|+.+|...
T Consensus 79 ~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ 139 (297)
T cd05089 79 YIAIEYAP--YGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ 139 (297)
T ss_pred eEEEEecC--CCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 89999997 346766665432 1 1246778888999999754
No 356
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=91.81 E-value=1.1 Score=39.81 Aligned_cols=104 Identities=13% Similarity=0.035 Sum_probs=64.0
Q ss_pred eeEecCCCceeEEEEEEeC-C-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCc
Q 048614 36 TIKEVGDGNLNFVYIVVGS-S-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~ 110 (165)
-.+.+|.|..-.||++... + + .+++|...... .-...+.+.|.++|+.+.. | .+++++ +.+.+..
T Consensus 71 ~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-------~~~~~~~~~E~~~l~~l~H--p-niv~~~~~~~~~~~~ 140 (478)
T PTZ00267 71 LTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-------ERQAAYARSELHCLAACDH--F-GIVKHFDDFKSDDKL 140 (478)
T ss_pred EEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-------HHHHHHHHHHHHHHHhCCC--C-CEeEEEEEEEECCEE
Confidence 4567788888889988764 3 3 68888643111 1122455667777766542 2 344444 3466788
Q ss_pred eEEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhc
Q 048614 111 LIGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
.+||||++ ...|.+.|.+ ...+ -.++.+|...|..+|..
T Consensus 141 ~lv~E~~~--gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~ 188 (478)
T PTZ00267 141 LLIMEYGS--GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR 188 (478)
T ss_pred EEEEECCC--CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99999997 3355544432 2222 13667888889988865
No 357
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=91.76 E-value=2.6 Score=34.90 Aligned_cols=107 Identities=14% Similarity=0.012 Sum_probs=66.8
Q ss_pred eeEecCCCceeEEEEEEeC--------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--
Q 048614 36 TIKEVGDGNLNFVYIVVGS--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-- 104 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-- 104 (165)
-.+.+|.|....||++... .+ .+.+|....... .-...+...|.++++.+... |..+. ++.
T Consensus 16 i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~iv~-~~~~~ 87 (334)
T cd05100 16 LGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT------DKDLSDLVSEMEMMKMIGKH-KNIIN-LLGAC 87 (334)
T ss_pred ecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC------HHHHHHHHHHHHHHHhhcCC-CCeee-eeEEE
Confidence 3578999999999999642 11 467775542211 11234667788888766433 43333 332
Q ss_pred EcCCCceEEEecCCCCchHHHHHHHcCC----------------CC-----HHHHHHHHHHHHHHHhcc
Q 048614 105 FDRTMSLIGMRYLEPPHIILRKGLIAGI----------------KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 105 ~D~~~~~~vMEdL~~~~~~lr~~l~~g~----------------~~-----~~~a~~iG~~La~~h~~t 152 (165)
.+.....++|||++ ..+|++.+.... .. -.++.+|...|+-+|...
T Consensus 88 ~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g 154 (334)
T cd05100 88 TQDGPLYVLVEYAS--KGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK 154 (334)
T ss_pred ccCCceEEEEecCC--CCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34455679999998 347888776421 11 136778999999999654
No 358
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=91.75 E-value=2.2 Score=35.38 Aligned_cols=106 Identities=11% Similarity=0.032 Sum_probs=64.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--------E
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--------F 105 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--------~ 105 (165)
.+..+|.|....||++.+. ++ .++||....-.. -.....+...|.++|+.+.. |..+ +++. .
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~iv-~~~~~~~~~~~~~ 90 (343)
T cd07878 19 NLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-----SLIHARRTYRELRLLKHMKH--ENVI-GLLDVFTPATSIE 90 (343)
T ss_pred hheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-----hhHHHHHHHHHHHHHHhcCC--Cchh-hhhhhhccccccc
Confidence 4578999999999999875 34 788997542111 11234566778888887753 2222 1111 1
Q ss_pred cCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
......++||+++. .|...+..+... -.++.+|...|.-+|...
T Consensus 91 ~~~~~~~~~~~~~~---~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 138 (343)
T cd07878 91 NFNEVYLVTNLMGA---DLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAG 138 (343)
T ss_pred ccCcEEEEeecCCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22345788998863 343433333332 257788888888898654
No 359
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=91.58 E-value=2 Score=33.66 Aligned_cols=104 Identities=14% Similarity=0.093 Sum_probs=62.4
Q ss_pred ecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614 39 EVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL 111 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~ 111 (165)
.+|.|....||++... .+ .+++|....... .-..++...|...|+... .|..++-.-.+ +.....
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~~ 73 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD------LEEVEQFLKEGIIMKDFS--HPNVLSLLGICLPSEGSPL 73 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCC------HHHHHHHHHHHHHHccCC--CCCcceEEEEeecCCCCcE
Confidence 5788888999998753 12 588886432111 112345556766665543 24444433222 334578
Q ss_pred EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
++||+.. ...|.+.+.... .. -.++.+|...|+.+|...
T Consensus 74 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 118 (262)
T cd05058 74 VVLPYMK--HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK 118 (262)
T ss_pred EEEecCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 346777765432 11 246678899999998754
No 360
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=91.55 E-value=1.5 Score=38.57 Aligned_cols=102 Identities=19% Similarity=0.283 Sum_probs=74.5
Q ss_pred EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEE
Q 048614 38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT--MSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~--~~~~v 113 (165)
..||.|+.-.+|-.++- ++ -|-||...-+.+. | -.+-|++..+.++. -.-+|.+|+|-++ -+++|
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A--P-------QLrdEYr~YKlL~g--~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA--P-------QLRDEYRTYKLLGG--TEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred cccccCcceeeecccccccCceEEEEeccccCCc--c-------hHHHHHHHHHHHcC--CCCCCceeeeccccchhhhh
Confidence 46889999999888764 45 8999988755542 2 46789999998884 2347999999997 48999
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||-|+|....|=+ +. |..| ..+|.++-+-+-.+|...
T Consensus 103 idLLGPSLEDLFD-~C-gR~FSvKTV~miA~Qmi~rie~vH~k~ 144 (449)
T KOG1165|consen 103 IDLLGPSLEDLFD-LC-GRRFSVKTVAMIAKQMITRIEYVHEKD 144 (449)
T ss_pred hhhhCcCHHHHHH-Hh-cCcccHHhHHHHHHHHHHHHHHHHhcc
Confidence 9999986666633 33 4433 246777777777777653
No 361
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.19 E-value=5.2 Score=34.79 Aligned_cols=109 Identities=18% Similarity=0.127 Sum_probs=70.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCC-CChHHHHHHHHHHHHhhccCCC--CCceEEEEcCCCc
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWP-MTKERAYFEALALKEHGQLCPD--HVPEVYHFDRTMS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~-l~~~R~~~E~~~L~~~~~~~p~--~vP~v~~~D~~~~ 110 (165)
-...+|.|+..-|+..... .| .+.+| -..+-.+ ..+. .-..+...|...|+..... |. ..-+++ ..+...
T Consensus 21 ~~~~lG~GsfgkV~~a~~~~t~~~vAiK-ii~~~~~--~~~~~~~~~~i~rEi~~~~~~~~H-pnI~~l~ev~-~t~~~~ 95 (370)
T KOG0583|consen 21 LGRTLGSGSFGKVKLAKHRLTGEKVAIK-IIDRKKV--SSKSQKLDELIKREISILRRLRSH-PNIIRLLEVF-ATPTKI 95 (370)
T ss_pred eeeeecCCCCeeEEEeeeccCCCeEEEE-Eechhcc--cccccccchhhHHHHHHHHHhccC-CCEeEEEEEE-ecCCeE
Confidence 5678999999999999665 44 78888 3333222 2233 3445666788888888754 32 123333 344558
Q ss_pred eEEEecCCCCchHHHHHHHc-CCCCH----HHHHHHHHHHHHHHhc
Q 048614 111 LIGMRYLEPPHIILRKGLIA-GIKYP----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~-g~~~~----~~a~~iG~~La~~h~~ 151 (165)
.+||||+. +. .|-+.+.+ |..-+ .+-.||-..++-.|..
T Consensus 96 ~ivmEy~~-gG-dL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~ 139 (370)
T KOG0583|consen 96 YIVMEYCS-GG-DLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR 139 (370)
T ss_pred EEEEEecC-Cc-cHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC
Confidence 99999998 44 55555555 55443 3557788888888877
No 362
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=91.09 E-value=2.5 Score=33.94 Aligned_cols=110 Identities=15% Similarity=0.021 Sum_probs=67.8
Q ss_pred Ccc-eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614 33 DAL-TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH 104 (165)
Q Consensus 33 ~~~-~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~ 104 (165)
.++ ..+.+|.|....||++... .+ .+++|....... .-...+...|.+.|+...+. |..+ +++.
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~i~-~~~~ 83 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT------EKDLSDLVSEMEMMKMIGKH-KNII-NLLG 83 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC------HHHHHHHHHHHHHHHhhcCC-CCee-eEEE
Confidence 344 4577898888999998753 12 578886553221 11224566788888776432 3332 2333
Q ss_pred --EcCCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 048614 105 --FDRTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 105 --~D~~~~~~vMEdL~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t 152 (165)
.+.....++|||++ + .+|...+.... .. -.++.+|...|+-+|...
T Consensus 84 ~~~~~~~~~li~e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ 152 (293)
T cd05053 84 VCTQEGPLYVVVEYAA-H-GNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK 152 (293)
T ss_pred EEcCCCCeEEEEEeCC-C-CcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34456789999998 3 37777664321 11 247888999999999653
No 363
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=90.93 E-value=1.9 Score=35.95 Aligned_cols=105 Identities=19% Similarity=0.152 Sum_probs=63.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--------E
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--------F 105 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--------~ 105 (165)
.+..+|.|....||++.+. +| .++||....... ......+...|.++|+.+.. |..+ +++. .
T Consensus 19 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~niv-~~~~~~~~~~~~~ 90 (342)
T cd07879 19 SLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-----SEIFAKRAYRELTLLKHMQH--ENVI-GLLDVFTSAVSGD 90 (342)
T ss_pred EEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-----cccchhHHHHHHHHHHhcCC--CCcc-chhheecccccCC
Confidence 5688899998999999865 45 799996542111 11223456678888876642 3222 2222 1
Q ss_pred cCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
+.....++||+++. .++..+ ..... ..++.++...|+-+|...
T Consensus 91 ~~~~~~lv~e~~~~---~l~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ 137 (342)
T cd07879 91 EFQDFYLVMPYMQT---DLQKIM-GHPLSEDKVQYLVYQMLCGLKYIHSAG 137 (342)
T ss_pred CCceEEEEeccccc---CHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22345899999972 344433 22221 246778888999998765
No 364
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=90.45 E-value=0.62 Score=36.53 Aligned_cols=63 Identities=17% Similarity=0.115 Sum_probs=43.8
Q ss_pred HHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614 82 YFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 82 ~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts 153 (165)
..|.++++.+++ -+..|++|+++++. .|.||+. +..+...- -..|.+...|+..|+++|...-
T Consensus 21 ~~E~~~~~~l~~--~g~~p~~~~~~~~g--~v~e~i~--g~~l~~~~---~~~~~~~~~iA~~l~~lH~~~~ 83 (211)
T PF01633_consen 21 ENENEALKLLSE--AGLGPKIIYFFENG--RVEEFIE--GRTLSPED---FRNPEILKRIAKLLAKLHSIPI 83 (211)
T ss_dssp HHHHHHHHHHHH--TTSSS-EEEEETTE--EEEE--S--SEE--CGG---GGSHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHH--cCCCCeEEEEcCCC--cEEEEec--ccccChhh---ccChHHHHHHHHHHHHHhhccc
Confidence 568889988887 47899999998665 5779996 55554321 1346789999999999998654
No 365
>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac
Probab=90.38 E-value=2 Score=35.44 Aligned_cols=30 Identities=20% Similarity=0.298 Sum_probs=25.7
Q ss_pred ceeEecCCCceeEEEEEEeCCCeEEEeecC
Q 048614 35 LTIKEVGDGNLNFVYIVVGSSGSFVIKQAL 64 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~ 64 (165)
+++...|||++-.++-|...+|.+|||-+.
T Consensus 2 ie~i~~s~s~~~~~~F~~s~~~a~ViK~s~ 31 (238)
T cd05124 2 IKAIDLSDSGVFGALFVESESGAIVVKSSP 31 (238)
T ss_pred ceEEEecCCceEEEEEEcCCCcEEEEEcCc
Confidence 578889999999888888777899999874
No 366
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=90.26 E-value=3.4 Score=32.31 Aligned_cols=93 Identities=13% Similarity=0.076 Sum_probs=53.8
Q ss_pred CceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEEecCC
Q 048614 43 GNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIGMRYLE 118 (165)
Q Consensus 43 Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~vMEdL~ 118 (165)
|...-||+|.+. +| .+++|+-..... . ..|...+. ....|. +++++ +.+.+...++|||++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-------~-----~~~~~~~~--~~~~~~-i~~~~~~~~~~~~~~lv~e~~~ 68 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-------Y-----SRERLTII--PHCVPN-MVCLHKYIVSEDSVFLVLQHAE 68 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh-------h-----hhHHHHHH--hcCCCc-eeehhhheecCCeEEEEEecCC
Confidence 666779999886 44 899998643211 1 11222111 111233 23333 346678899999998
Q ss_pred CCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 119 PPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 119 ~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+ ..|.+.+.+.... -.++.++...|..+|...
T Consensus 69 -~-~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ 105 (237)
T cd05576 69 -G-GKLWSHISKFLNIPEECVKRWAAEMVVALDALHREG 105 (237)
T ss_pred -C-CCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3 3666666554322 246677788888888654
No 367
>PTZ00036 glycogen synthase kinase; Provisional
Probab=90.21 E-value=5 Score=35.19 Aligned_cols=104 Identities=14% Similarity=0.148 Sum_probs=59.9
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEc------
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFD------ 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D------ 106 (165)
-.+.+|.|....||++... .+ .++||.-... . .....|..+|+.+.. |..++-. ++++
T Consensus 70 ~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-----~------~~~~~Ei~il~~l~h--~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 70 LGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-----P------QYKNRELLIMKNLNH--INIIFLKDYYYTECFKKN 136 (440)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-----c------chHHHHHHHHHhcCC--CCCcceeeeEeecccccC
Confidence 4677899999999999875 34 7889865311 1 123358888877643 4333321 1111
Q ss_pred CCC--ceEEEecCCCCc-hHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 107 RTM--SLIGMRYLEPPH-IILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~--~~~vMEdL~~~~-~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
... ..+||||++.+. ..++.....+...+ .++.+|...|+-+|...
T Consensus 137 ~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~ 190 (440)
T PTZ00036 137 EKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF 190 (440)
T ss_pred CCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 111 237999998321 11222222333222 35678888999999754
No 368
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=90.02 E-value=5.1 Score=34.89 Aligned_cols=103 Identities=18% Similarity=0.001 Sum_probs=70.9
Q ss_pred cCCCceeEEEEEEeCCCe-EEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC---CceEEEe
Q 048614 40 VGDGNLNFVYIVVGSSGS-FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT---MSLIGMR 115 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~~gs-vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~---~~~~vME 115 (165)
+|.|.--.||+..-.+.. +.||...+--... .. ..+.+.|+..|..++- |..|. ++..=.+ ...+|||
T Consensus 49 iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~-~~----~~~f~~E~~il~~l~H--pNIV~-f~G~~~~~~~~~~iVtE 120 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKWRGTDVVAVKIISDPDFDD-ES----RKAFRREASLLSRLRH--PNIVQ-FYGACTSPPGSLCIVTE 120 (362)
T ss_pred cccCCceeEEEEEeCCceeEEEEEecchhcCh-HH----HHHHHHHHHHHHhCCC--CCeee-EEEEEcCCCCceEEEEE
Confidence 888999999999877555 8888877655431 21 7788888888887433 44444 5554444 3689999
Q ss_pred cCCCCchHHHHHHHc---CCCCH----HHHHHHHHHHHHHHhcc
Q 048614 116 YLEPPHIILRKGLIA---GIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dL~~~~~~lr~~l~~---g~~~~----~~a~~iG~~La~~h~~t 152 (165)
|++ ...|++.|.. +...+ .+|.+|++-|--+|...
T Consensus 121 y~~--~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~ 162 (362)
T KOG0192|consen 121 YMP--GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEG 162 (362)
T ss_pred eCC--CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 998 3478887755 33333 56777777776677655
No 369
>PHA03207 serine/threonine kinase US3; Provisional
Probab=89.82 E-value=5.6 Score=33.99 Aligned_cols=100 Identities=10% Similarity=-0.054 Sum_probs=63.9
Q ss_pred eeEecCCCceeEEEEEEeC---CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCc
Q 048614 36 TIKEVGDGNLNFVYIVVGS---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~ 110 (165)
-+..+|.|....||++... .+ .++||.... . .....|.++|+.+.. |..++-+ .+.+....
T Consensus 96 i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~------~------~~~~~E~~il~~l~h--~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 96 ILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTG------G------KTPGREIDILKTISH--RAIINLIHAYRWKSTV 161 (392)
T ss_pred EEEeecCCCCeEEEEEEEcCCccceeEEEEeccc------c------ccHHHHHHHHHhcCC--CCccceeeeEeeCCEE
Confidence 4577899999999998653 23 688886431 1 123468888887753 4444332 23345667
Q ss_pred eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614 111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.++||+++. .+.+.+...... -.++.+|...|+-+|...
T Consensus 162 ~lv~e~~~~---~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~g 205 (392)
T PHA03207 162 CMVMPKYKC---DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRG 205 (392)
T ss_pred EEEehhcCC---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 899999872 454555433222 257788888899999764
No 370
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=89.62 E-value=4.4 Score=35.48 Aligned_cols=105 Identities=18% Similarity=0.181 Sum_probs=71.4
Q ss_pred EecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC--CceEEEEcCCCceEE
Q 048614 38 KEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDH--VPEVYHFDRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~--vP~v~~~D~~~~~~v 113 (165)
+++|.|..-.||++.... | .+-+|.-...... +. .+.+-...|..+|+.+... |.. ++.+ +-|+..-.+|
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~-~~---~~~~~v~~Ev~il~~l~~h-pniv~l~~~-~e~~~~~~lv 114 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLR-GK---EDREDVRREVAILQQLSGH-PNIVQLKDA-FEDPDSVYLV 114 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhcc-cc---ccHHHHHHHHHHHHhccCC-CCEEEEEEE-EEcCCeEEEE
Confidence 599999999999999874 5 5666665433321 22 2667888999999988762 332 2332 2344566899
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
||.+. +..|-+.+.+.. + ..++.+|...+..+|..
T Consensus 115 mEL~~--GGeLfd~i~~~~-~sE~da~~~~~~il~av~~lH~~ 154 (382)
T KOG0032|consen 115 MELCE--GGELFDRIVKKH-YSERDAAGIIRQILEAVKYLHSL 154 (382)
T ss_pred EEecC--CchHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHhC
Confidence 99998 346667777652 3 35677777888888873
No 371
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=89.58 E-value=1.8 Score=35.64 Aligned_cols=110 Identities=17% Similarity=0.120 Sum_probs=64.1
Q ss_pred eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCC-C------hHHHHHHHHHHHHhhccCC---CCCceEEEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPM-T------KERAYFEALALKEHGQLCP---DHVPEVYHF 105 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l-~------~~R~~~E~~~L~~~~~~~p---~~vP~v~~~ 105 (165)
.++.+.+..-|+|.+|..+++++|+|.-++..+.. +..+ + ..|....-.-++..+-..+ -.+..--.+
T Consensus 35 ~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~--er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~ 112 (229)
T PF06176_consen 35 IIKVFKNTKRNYVALIEIDGKKYILKEPREENRRP--ERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIF 112 (229)
T ss_pred EEEeecCCCccEEEEEEECCcEEEEeccchhhhhH--HHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeeec
Confidence 55788899999999999988899999998876542 1000 0 1111111111211111111 123333333
Q ss_pred c-CCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 106 D-RTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 D-~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
. ...++++|||+. +..+-+.. ...+.+++.|...+-++|...
T Consensus 113 ~~~~~~~ll~EYIe--G~~l~d~~---~i~e~~~~ki~~~ikqlH~~G 155 (229)
T PF06176_consen 113 RYTSSYVLLMEYIE--GVELNDIE---DIDEDLAEKIVEAIKQLHKHG 155 (229)
T ss_pred cceeEEEEEEEEec--Ceecccch---hcCHHHHHHHHHHHHHHHHcC
Confidence 2 355678999998 34443311 134567888889999999764
No 372
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=89.51 E-value=5.3 Score=31.49 Aligned_cols=105 Identities=15% Similarity=0.095 Sum_probs=64.4
Q ss_pred EecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--C--
Q 048614 38 KEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR--T-- 108 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--~-- 108 (165)
+.+|.|....||++... .+ .++||+-...... ....++...|...|+.+.. | .+.+++.+-. +
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~~~~ 76 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS-----SSDIEEFLREAACMKEFDH--P-NVIKLIGVSLRSRAK 76 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC-----hHHHHHHHHHHHHHhcCCC--C-CcceEEEEEccCCCC
Confidence 46788888999999753 24 7999987654422 1234567778887776642 4 3455554321 1
Q ss_pred ----CceEEEecCCCCchHHHHHHHc----CCC-------CHHHHHHHHHHHHHHHhcc
Q 048614 109 ----MSLIGMRYLEPPHIILRKGLIA----GIK-------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ----~~~~vMEdL~~~~~~lr~~l~~----g~~-------~~~~a~~iG~~La~~h~~t 152 (165)
...++|||.. ...|...+.. ++. .-.++.+|...|+-+|...
T Consensus 77 ~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~ 133 (273)
T cd05074 77 GRLPIPMVILPFMK--HGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN 133 (273)
T ss_pred CcccceEEEEecCC--CCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1257888886 2355554432 111 1357788888899888765
No 373
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=89.38 E-value=5.1 Score=33.04 Aligned_cols=104 Identities=12% Similarity=-0.015 Sum_probs=61.0
Q ss_pred ecCCC--ceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceE
Q 048614 39 EVGDG--NLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSLI 112 (165)
Q Consensus 39 ~l~~G--n~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~~ 112 (165)
++|.| +...||++.+. .| .+.||.-..--.. . -..++...|...++.+.. |. +.++ ++.+.+...+
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~--~---~~~~~~~~e~~~~~~l~h--~n-iv~~~~~~~~~~~~~~ 76 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT--E---EHLKALQNEVVLSHFFRH--PN-IMTSWTVFTTGSWLWV 76 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC--H---HHHHHHHHHHHHHHhCCC--CC-cceEeeeEecCCceEE
Confidence 45666 55669999875 44 7888875421110 0 112455566666654432 33 3333 3336677889
Q ss_pred EEecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||++. +..+.+.+.... .. -.++.+|...|+-+|...
T Consensus 77 v~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ 121 (328)
T cd08226 77 ISPFMA--YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG 121 (328)
T ss_pred EEeccc--CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 345555554321 11 147788899999998643
No 374
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=89.30 E-value=8.4 Score=32.15 Aligned_cols=107 Identities=13% Similarity=0.070 Sum_probs=63.6
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD------- 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------- 106 (165)
.++.+|.|....||++.+. +| .+++|.-..-. .-....++...|.+.|+.+.. |..++-.-.+.
T Consensus 21 ~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~Ei~~l~~l~h--~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 21 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-----QSIIHAKRTYRELRLLKHMKH--ENVIGLLDVFTPARSLEE 93 (345)
T ss_pred EEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-----hhhHHHHHHHHHHHHHHHcCC--Ccccceeeeeeecccccc
Confidence 5678999999999999865 45 78888554211 112234567778888877643 33333221121
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614 107 RTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++. .+...+..+... -.++.+|...|+-+|...
T Consensus 94 ~~~~~lv~~~~~~---~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 140 (345)
T cd07877 94 FNDVYLVTHLMGA---DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 140 (345)
T ss_pred cccEEEEehhccc---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 1234567777652 444444333322 246778888888898765
No 375
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=89.27 E-value=4.6 Score=32.15 Aligned_cols=105 Identities=15% Similarity=0.043 Sum_probs=63.3
Q ss_pred eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614 37 IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~ 107 (165)
++++|.|....||++... .+ .++||....... .-..++...|...++.+. .|..+ +++. .+.
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~~~~l~--h~~iv-~~~~~~~~~ 80 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE------GPLREEFKHEAMMRSRLQ--HPNIV-CLLGVVTKE 80 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC------HHHHHHHHHHHHHHhcCC--CCCcC-eEEEEEcCC
Confidence 456788888899999753 12 688887652221 111244556666665443 24333 3333 345
Q ss_pred CCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t 152 (165)
....++|||.+ ...+...+..+. .. -.++.++...|.-+|...
T Consensus 81 ~~~~~~~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g 144 (283)
T cd05091 81 QPLSMIFSYCS--HSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH 144 (283)
T ss_pred CceEEEEEcCC--CCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence 66778999987 456766664211 11 146778899999998654
No 376
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=89.12 E-value=11 Score=30.82 Aligned_cols=107 Identities=13% Similarity=0.057 Sum_probs=64.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCC-CChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWP-MTKERAYFEALALKEHGQLCPDHVPEVY-HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~-l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~~~~ 111 (165)
.+..+|.|....||++.+. +| .+++|.-.. . ..+. -...+...|.+.|+.+.. |..++-.- +.+.....
T Consensus 29 ~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~-~----~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~ 101 (317)
T cd06635 29 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSY-S----GKQSNEKWQDIIKEVKFLQRIKH--PNSIEYKGCYLREHTAW 101 (317)
T ss_pred hhheeccCCCeEEEEEEEcCCCcEEEEEEEec-C----CCCchHHHHHHHHHHHHHHhCCC--CCEEEEEEEEeeCCeEE
Confidence 5677999999999999875 34 788885421 1 0111 112356667777776642 44333332 33667788
Q ss_pred EEEecCCCCchHHHHHHHc-CC-CC----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIA-GI-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~-g~-~~----~~~a~~iG~~La~~h~~t 152 (165)
+||||+++ .+-+.+.. +. .. -.++.+|...|+-+|...
T Consensus 102 lv~e~~~g---~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ 145 (317)
T cd06635 102 LVMEYCLG---SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN 145 (317)
T ss_pred EEEeCCCC---CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999973 23233322 22 21 235678888888888764
No 377
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=88.36 E-value=7 Score=34.00 Aligned_cols=84 Identities=15% Similarity=0.051 Sum_probs=52.9
Q ss_pred eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614 37 IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~ 107 (165)
.+.+|.|-...||++... .+ .+.||.-..-.+ .-...+...|.++|+.+... | ++.+++.+ +.
T Consensus 42 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~~E~~~l~~l~~H-~-niv~~~~~~~~~ 113 (401)
T cd05107 42 GRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR------SSEKQALMSELKIMSHLGPH-L-NIVNLLGACTKG 113 (401)
T ss_pred hhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC------hhHHHHHHHHHHHHHhcCCC-C-CeEEEEEEEccC
Confidence 468999999999999853 12 588887642211 11234667788888776432 3 34444433 33
Q ss_pred CCceEEEecCCCCchHHHHHHHc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIA 130 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~ 130 (165)
....+||||++ ..+|.+.+.+
T Consensus 114 ~~~~iv~E~~~--~g~L~~~l~~ 134 (401)
T cd05107 114 GPIYIITEYCR--YGDLVDYLHR 134 (401)
T ss_pred CCcEEEEeccC--CCcHHHHHHh
Confidence 45689999998 3467666643
No 378
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=88.04 E-value=3.3 Score=37.09 Aligned_cols=110 Identities=17% Similarity=0.076 Sum_probs=61.9
Q ss_pred cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc---eEEEEcC
Q 048614 34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP---EVYHFDR 107 (165)
Q Consensus 34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP---~v~~~D~ 107 (165)
.+ -.+.+|.|....||++.+. +| .+.||.-...-. -.-...|...|..+|....- |..+. .....|+
T Consensus 33 rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-----~~~~~~~~~~Ei~~l~~~~h--~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 33 KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-----SEADKNRAQAEVCCLLNCDF--FSIVKCHEDFAKKDP 105 (496)
T ss_pred CEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-----CHHHHHHHHHHHHHHhcCCC--CcEEEeecceecccc
Confidence 44 4568999999999999865 45 799997432110 01122345555555554321 11111 0111111
Q ss_pred ---C---CceEEEecCCCCchHHHHHHHcC----CCCH-----HHHHHHHHHHHHHHhcc
Q 048614 108 ---T---MSLIGMRYLEPPHIILRKGLIAG----IKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 ---~---~~~~vMEdL~~~~~~lr~~l~~g----~~~~-----~~a~~iG~~La~~h~~t 152 (165)
. ...+||||++ ...|++.+... ..++ .++.++...|..+|...
T Consensus 106 ~~~~~~~~i~lV~Ey~~--~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~ 163 (496)
T PTZ00283 106 RNPENVLMIALVLDYAN--AGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH 163 (496)
T ss_pred cCcccceEEEEEEeCCC--CCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1 1358999998 34677766542 2222 36778888999999643
No 379
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=87.93 E-value=3.3 Score=34.82 Aligned_cols=33 Identities=21% Similarity=0.181 Sum_probs=23.6
Q ss_pred HHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCC
Q 048614 84 EALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEP 119 (165)
Q Consensus 84 E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~ 119 (165)
|+.-|+.+.+. ...||+.| .-.++++|||++|.
T Consensus 118 Ef~NL~R~~eA-GVrvP~Pi--~~~~nVLvMEfIg~ 150 (268)
T COG1718 118 EFRNLKRAYEA-GVRVPEPI--AFRNNVLVMEFIGD 150 (268)
T ss_pred HHHHHHHHHHc-CCCCCCce--eecCCeEEEEeccC
Confidence 33344444443 57899998 55899999999995
No 380
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=87.87 E-value=5 Score=33.58 Aligned_cols=83 Identities=16% Similarity=0.035 Sum_probs=47.7
Q ss_pred eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614 37 IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~ 107 (165)
.+.+|.|....||++... .+ .+++|+-..-.. .-...+...|...++.+... |. +.+++. +++
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~~E~~~~~~l~~h-~n-iv~~~~~~~~~ 83 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT------ASEYKALMTELKILIHIGHH-LN-VVNLLGACTKP 83 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCC------HHHHHHHHHHHHHHHhhccC-cc-hhheeeeEecC
Confidence 477899999999998532 22 588886542110 01123455677777665321 33 333432 233
Q ss_pred -CCceEEEecCCCCchHHHHHHH
Q 048614 108 -TMSLIGMRYLEPPHIILRKGLI 129 (165)
Q Consensus 108 -~~~~~vMEdL~~~~~~lr~~l~ 129 (165)
....++|||++ +.+|...+.
T Consensus 84 ~~~~~~v~ey~~--~~~L~~~i~ 104 (337)
T cd05054 84 GGPLMVIVEYCK--FGNLSNYLR 104 (337)
T ss_pred CCCEEEEEecCC--CCCHHHHHH
Confidence 34567899998 346655553
No 381
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=86.45 E-value=6.5 Score=29.65 Aligned_cols=94 Identities=19% Similarity=0.088 Sum_probs=60.7
Q ss_pred EEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEEecCCCCch
Q 048614 47 FVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIGMRYLEPPHI 122 (165)
Q Consensus 47 ~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~vMEdL~~~~~ 122 (165)
-||++.... | .+++|........ .+ .++...|.+.++.+.. |. ++.++ ..+.....++||+.+ ..
T Consensus 4 ~v~~~~~~~~~~~~~~k~~~~~~~~---~~---~~~~~~e~~~~~~l~~--~~-i~~~~~~~~~~~~~~l~~e~~~--~~ 72 (244)
T smart00220 4 KVYLARDKKTGKLVAIKVIKKEKIK---KK---RERILREISILKKLKH--PN-IVRLYDVFEDEDKLYLVMEYCD--GG 72 (244)
T ss_pred EEEEEEECCCCcEEEEEEecccccc---cH---HHHHHHHHHHHHhCCC--Cc-HHHHHhheeeCCEEEEEEeCCC--CC
Confidence 578888764 5 8999987644321 11 5788888888877722 32 33333 234478899999998 34
Q ss_pred HHHHHHHcCC-CC----HHHHHHHHHHHHHHHhc
Q 048614 123 ILRKGLIAGI-KY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 123 ~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~ 151 (165)
.|...+.... .. -.++.++...++.+|..
T Consensus 73 ~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 106 (244)
T smart00220 73 DLFDLLKKRGRLSEDEARFYARQILSALEYLHSN 106 (244)
T ss_pred CHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 7777665543 11 25677788888888865
No 382
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=86.32 E-value=10 Score=32.24 Aligned_cols=105 Identities=16% Similarity=0.253 Sum_probs=73.3
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~~~~ 111 (165)
-|+.+|.|..--+|....- +| .|-||-....+|. | -..+|+.+.+.++.-. -.|.+++|- .+-++
T Consensus 19 lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--p-------qL~yEskvY~iL~~g~--GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 19 LVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--P-------QLLYESKVYRILQGGV--GIPHIRHYGTEKDYNV 87 (341)
T ss_pred EEEeecCCchhheeeeeeccCCceEEEEeecccCCC--c-------chhHHHHHHHHhccCC--CCchhhhhccccccce
Confidence 7889999999999887654 56 8999998888875 3 3457888887766532 358887776 56789
Q ss_pred EEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~ 151 (165)
+||+-|+|....|=....+.-. ---+|.|+-.-+--+|..
T Consensus 88 lVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r 130 (341)
T KOG1163|consen 88 LVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR 130 (341)
T ss_pred eeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh
Confidence 9999999866665444433221 124677776666666654
No 383
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=86.19 E-value=8.4 Score=35.85 Aligned_cols=105 Identities=17% Similarity=0.103 Sum_probs=77.8
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC---CCceEE--EEcCC
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPD---HVPEVY--HFDRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~---~vP~v~--~~D~~ 108 (165)
..+.||-|..--|.|..+.. + -|.||--.-..+- .....+|..+|..+.+.-|+ ++-+.| ++...
T Consensus 190 V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f--------~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 190 VLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF--------LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEecccccceeEEEEecCCCcEEEEEeeccChHH--------HHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 46678888888888888763 4 6888876654443 26788999999999976565 444444 45567
Q ss_pred CceEEEecCCCCchHHHHHHHcCCC-------CHHHHHHHHHHHHHHHhc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIK-------YPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~-------~~~~a~~iG~~La~~h~~ 151 (165)
-..+|.|-|+ .+|.+.|...+- ...++.+|.+.|..+|-.
T Consensus 262 HlciVfELL~---~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l 308 (586)
T KOG0667|consen 262 HLCIVFELLS---TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL 308 (586)
T ss_pred ceeeeehhhh---hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 7889999997 699888876542 236899999999999843
No 384
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=85.32 E-value=5.6 Score=36.41 Aligned_cols=112 Identities=22% Similarity=0.230 Sum_probs=70.8
Q ss_pred CcceeEecCCCceeEEEEEEeCCC-eEEEeecCccccc------------------cCC-CCCCChHHH-----------
Q 048614 33 DALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRC------------------IGE-SWPMTKERA----------- 81 (165)
Q Consensus 33 ~~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~------------------~~~-~~~l~~~R~----------- 81 (165)
++.+-+|++.+.+--|++....+| .|+||-=+|=++. .-+ .|.+++.-.
T Consensus 126 ~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~E 205 (517)
T COG0661 126 SEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREE 205 (517)
T ss_pred HHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHH
Confidence 356778999999999999999988 9999999997653 111 133443222
Q ss_pred ---HHHHHHHHHhhccC---CC-CCceEEEEcCCCceEEEecCCCCchHHHHH-HH-cCCCCHHHHHHHHHHH
Q 048614 82 ---YFEALALKEHGQLC---PD-HVPEVYHFDRTMSLIGMRYLEPPHIILRKG-LI-AGIKYPLLAEHMSEFM 145 (165)
Q Consensus 82 ---~~E~~~L~~~~~~~---p~-~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~-l~-~g~~~~~~a~~iG~~L 145 (165)
+.|+..+..+++.. |. .||+||--=-...+++|||+. +-+.-... +. +|.....+|+.+.+..
T Consensus 206 lDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~-Gi~i~d~~~l~~~g~d~k~ia~~~~~~f 277 (517)
T COG0661 206 LDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWID-GIKISDIAALKSAGIDRKELAELLVRAF 277 (517)
T ss_pred hCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeC-CEecccHHHHHhcCCCHHHHHHHHHHHH
Confidence 34555666665543 22 799999544478999999998 33333222 22 2333235555554433
No 385
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=84.85 E-value=19 Score=29.15 Aligned_cols=100 Identities=17% Similarity=0.119 Sum_probs=60.3
Q ss_pred EecCCCceeEEEEEEeC---CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-c--CCCc
Q 048614 38 KEVGDGNLNFVYIVVGS---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-D--RTMS 110 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D--~~~~ 110 (165)
..+|.|....||++... .+ .+.+|+.... .. ......|.++|+.+.. |..+.-.-.| + ....
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~------~~---~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 75 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT------GI---SMSACREIALLRELKH--PNVISLQKVFLSHADRKV 75 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCC------CC---cHHHHHHHHHHHhcCC--CCCcceeeeEecCCCcEE
Confidence 56899999999999854 23 6888875421 11 1345678888887753 4433322222 1 2335
Q ss_pred eEEEecCCCCchHHHHHHHcC---------CCC-----HHHHHHHHHHHHHHHhc
Q 048614 111 LIGMRYLEPPHIILRKGLIAG---------IKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g---------~~~-----~~~a~~iG~~La~~h~~ 151 (165)
.++||+.+. .+...+... ... -.++.+|...|.-+|..
T Consensus 76 ~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~ 127 (317)
T cd07868 76 WLLFDYAEH---DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 127 (317)
T ss_pred EEEEeccCC---CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 688999873 333333211 111 24678888899988865
No 386
>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]
Probab=84.43 E-value=4.1 Score=35.43 Aligned_cols=102 Identities=18% Similarity=0.230 Sum_probs=66.1
Q ss_pred CCCcceeEecCCCceeEEEEEEeCCC---eEEEeecCccccccCC--CCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 048614 31 KFDALTIKEVGDGNLNFVYIVVGSSG---SFVIKQALPYVRCIGE--SWPMTKERAYFEALALKEHGQLCPDHVPEVYHF 105 (165)
Q Consensus 31 ~~~~~~v~~l~~Gn~N~v~rv~~~~g---svIvKqa~p~~r~~~~--~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~ 105 (165)
+..+++.+..+||-.|-++-+..... +|+| |+.|+ +.-++.++-.. ..+.+++ -+..|++|
T Consensus 80 ~~~~v~~~~fs~gitNkL~~~~vg~~~e~~v~v-------rvyg~~te~vIdre~Ev~---afk~L~a--~G~ap~Ly-- 145 (391)
T KOG4720|consen 80 KPPEVTFKRFSDGITNKLFSCYVGENMEDHVLV-------RVYGHNTELVIDRENEVI---AFKLLAA--YGFAPKLY-- 145 (391)
T ss_pred CccceeeeeeccchhHHHHHhhcccccceeEEE-------EeccCCCceeeccHHHHH---HHHHHHH--cCcChhhh--
Confidence 45678888999999998877665432 3433 33333 23455554433 3333333 25678887
Q ss_pred cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 048614 106 DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ 151 (165)
-.=++-+|.||+. ++.|-- +....|.+...|++-||++|.-
T Consensus 146 ~tF~NGLvyefi~--g~tL~p---~~mr~pki~~lIAr~mak~H~~ 186 (391)
T KOG4720|consen 146 GTFNNGLVYEFIQ--GKTLEP---EHMREPKIFRLIARRMAKIHSI 186 (391)
T ss_pred heecCceEEeeec--CcccCh---hhccChHHHHHHHHHHHHhhee
Confidence 4558899999998 445533 2234688999999999999964
No 387
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=83.68 E-value=6.8 Score=35.92 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=58.6
Q ss_pred Ccc-eeEecCCCceeEEEEEEeC-C----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-----
Q 048614 33 DAL-TIKEVGDGNLNFVYIVVGS-S----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP----- 100 (165)
Q Consensus 33 ~~~-~v~~l~~Gn~N~v~rv~~~-~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP----- 100 (165)
+++ -...||.|..-.||++.+. + + .++||+...+.. .|......+...++..+.
T Consensus 132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--------------~e~~~~e~l~~~~~~~~~~~~~~ 197 (566)
T PLN03225 132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--------------VEIWMNERVRRACPNSCADFVYG 197 (566)
T ss_pred CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--------------hHHHHHHHHHhhchhhHHHHHHh
Confidence 445 4577999999999999875 3 4 899998653321 111111111111111100
Q ss_pred ---eEEEEcCCCceEEEecCCCCchHHHHHHHcCCC-------------------------CHHHHHHHHHHHHHHHhc
Q 048614 101 ---EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIK-------------------------YPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 101 ---~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~-------------------------~~~~a~~iG~~La~~h~~ 151 (165)
..-.-+.....+||||.+ ...|.+.+..... ...++.+|...|..+|..
T Consensus 198 ~~~~~~~~~~~~~~LV~ey~~--~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~ 274 (566)
T PLN03225 198 FLEPVSSKKEDEYWLVWRYEG--ESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST 274 (566)
T ss_pred hhcccccccCCceEEEEEecC--CCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC
Confidence 000235567889999997 3456555543221 014677788888888865
No 388
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=82.99 E-value=13 Score=31.80 Aligned_cols=105 Identities=20% Similarity=0.069 Sum_probs=72.5
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-CC--Cc
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-RT--MS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~~--~~ 110 (165)
..+-+|.|..-.||...+.+ | -.-||+..-. ..|. .+=...|..+|+.+. .|..|+..-.++ .+ ..
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~-----~~~~--~~~l~~Ei~iL~~l~--~p~IV~~~G~~~~~~~~~~ 91 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELE-----DSPT--SESLEREIRILSRLN--HPNIVQYYGSSSSRENDEY 91 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecc-----cchh--HHHHHHHHHHHHhCC--CCCEEeeCCccccccCeee
Confidence 66778999999999999875 5 7888887633 1122 333566777888777 566666533312 23 48
Q ss_pred eEEEecCCCCchHHHHHHHc-C-CCC----HHHHHHHHHHHHHHHhc
Q 048614 111 LIGMRYLEPPHIILRKGLIA-G-IKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~-g-~~~----~~~a~~iG~~La~~h~~ 151 (165)
-+.|||++ ..+|.+.+.+ | ... ...+.+|.+-|+-+|..
T Consensus 92 ~i~mEy~~--~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~ 136 (313)
T KOG0198|consen 92 NIFMEYAP--GGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK 136 (313)
T ss_pred EeeeeccC--CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 89999998 3477776665 3 222 25889999999999944
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=82.65 E-value=18 Score=33.00 Aligned_cols=118 Identities=14% Similarity=0.164 Sum_probs=62.5
Q ss_pred Ccc-eeEecCCCceeEEEEEEe-----------------CCC-eEEEeecCccccccCCCC-------CCChHHHHHHHH
Q 048614 33 DAL-TIKEVGDGNLNFVYIVVG-----------------SSG-SFVIKQALPYVRCIGESW-------PMTKERAYFEAL 86 (165)
Q Consensus 33 ~~~-~v~~l~~Gn~N~v~rv~~-----------------~~g-svIvKqa~p~~r~~~~~~-------~l~~~R~~~E~~ 86 (165)
++. ..+.||.|..-.||+... ..+ .|+||+-...-.....++ .-..+....|..
T Consensus 145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~ 224 (507)
T PLN03224 145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAY 224 (507)
T ss_pred cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHH
Confidence 344 556789999999998753 123 688887532110000000 112234445666
Q ss_pred HHHHhhc--cCCCCCceEEEE----------cCCCceEEEecCCCCchHHHHHH---------------HcCCCC-----
Q 048614 87 ALKEHGQ--LCPDHVPEVYHF----------DRTMSLIGMRYLEPPHIILRKGL---------------IAGIKY----- 134 (165)
Q Consensus 87 ~L~~~~~--~~p~~vP~v~~~----------D~~~~~~vMEdL~~~~~~lr~~l---------------~~g~~~----- 134 (165)
.+..+.. +....+.+.+.| +.....+||||.+. .+|.+.| ..|...
T Consensus 225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~--gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESD--ATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCC--CcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 5555433 222233333322 34567899999983 3443333 223211
Q ss_pred ---------HHHHHHHHHHHHHHHhcc
Q 048614 135 ---------PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 135 ---------~~~a~~iG~~La~~h~~t 152 (165)
-.++.++...|..+|...
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ 329 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG 329 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 135677788888888754
No 390
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=82.40 E-value=17 Score=35.50 Aligned_cols=109 Identities=19% Similarity=0.143 Sum_probs=66.0
Q ss_pred CCCcce-eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--
Q 048614 31 KFDALT-IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-- 105 (165)
Q Consensus 31 ~~~~~~-v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-- 105 (165)
+...++ ++.++-|+--.||++... +| -..||--.|-.-. + +-...|+++|+...-. -++++.|++
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-------d-eEiE~eynil~~~~~h--pnv~~fyg~~~ 86 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-------E-EEIELEYNMLKKYSHH--PNVATFYGAFI 86 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-------c-HHHHHHHHHHHhccCC--CCcceEEEEEE
Confidence 445564 556788999999999876 34 5666655544432 1 5788899999877553 245555554
Q ss_pred -----cCCCceEEEecCCCCc-hHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 048614 106 -----DRTMSLIGMRYLEPPH-IILRKGLIAGIKY-----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 106 -----D~~~~~~vMEdL~~~~-~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~ 150 (165)
..+.--+|||+|+.+. +.|-.-+. |... .-+...++.-|..+|.
T Consensus 87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~ 141 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN 141 (953)
T ss_pred EecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh
Confidence 3477789999999532 23434343 4322 2244444555555553
No 391
>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]
Probab=82.20 E-value=5.3 Score=35.03 Aligned_cols=110 Identities=14% Similarity=0.163 Sum_probs=75.0
Q ss_pred CCCcceeEecCCCceeEEEEEEeCCC-eEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC
Q 048614 31 KFDALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT 108 (165)
Q Consensus 31 ~~~~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~ 108 (165)
..+..+++.++||..|.+|.++.+.. ..|=++-.+.+ |+.|+.-. ..-...|...+..++.. +.=|++|.+-++
T Consensus 39 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~LlRiyg~~~~--~~~~~~Esv~fa~lSer--~lGPkL~G~F~~ 114 (366)
T KOG2686|consen 39 INEEQRLEVIPGGGSNLLFVVTSSASTTPIKDEPRKVLLRIYGQGVD--FSQRETESVMFAILSER--GLGPKLYGFFSG 114 (366)
T ss_pred hhhhheeeeccCCCcceEEEEecCcccCCcccccceeEEEEecCCcc--HHHhhhHHHHHHHHhhc--CCCcceeeecCC
Confidence 34567999999999999999998876 44434444444 87665332 45556677777777663 456999988765
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ 151 (165)
-- +=||++ ...|.. +.-..|++...||.-|+..|..
T Consensus 115 GR--~Eefip--SRtL~~---~~i~~p~~S~~Ia~~~~~~H~~ 150 (366)
T KOG2686|consen 115 GR--FEEFIP--SRTLTL---ADIRDPEISKRIAAKLAEYHGI 150 (366)
T ss_pred cc--Hhhhcc--ccccch---HhhcchhHHHHHHHHHHHhcCC
Confidence 43 224444 445543 3346788999999999999964
No 392
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=81.99 E-value=22 Score=32.09 Aligned_cols=111 Identities=19% Similarity=0.159 Sum_probs=66.2
Q ss_pred ceeEecCCCceeEEEEEEeC-CC-eEEEeecCccc--cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCC
Q 048614 35 LTIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYV--RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRTM 109 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~--r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~~ 109 (165)
+--+.+|-|-.-.|-.+-.. +| .|-||+--..- .+. + -.....+...|.++|+.++- |..|---=+| +++.
T Consensus 175 ii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s-~-~~~~~~~v~~EieILkkL~H--P~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 175 IISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCS-R-AIAKTRDVQNEIEILKKLSH--PNIVRIKDFFEVPDS 250 (475)
T ss_pred EeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhccccc-c-cccchhhhHHHHHHHHhcCC--CCEEEEeeeeecCCc
Confidence 46677888888777666544 45 78888754332 211 1 13344556899999988766 4433222233 4455
Q ss_pred ceEEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhc
Q 048614 110 SLIGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~ 151 (165)
.-+||||.+ ++. |-+.+.+.+ .. ..+..|+-+.+--+|..
T Consensus 251 ~YmVlE~v~-GGe-Lfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~ 295 (475)
T KOG0615|consen 251 SYMVLEYVE-GGE-LFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ 295 (475)
T ss_pred eEEEEEEec-Ccc-HHHHHHhccccccchhHHHHHHHHHHHHHHHHc
Confidence 599999998 454 445454433 22 34566666666666654
No 393
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=80.05 E-value=12 Score=32.40 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=71.6
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC---
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT--- 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~--- 108 (165)
.++.+|+|.--.||++... .| -|.+|..+-.-.. +. .++=...|..+|+.++.-++ +-.++. ++..
T Consensus 15 ~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~--EG---~P~taiREisllk~L~~~~~--iv~L~dv~~~~~~~~ 87 (323)
T KOG0594|consen 15 KVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE--EG---VPSTAIREISLLKRLSHANH--IVRLHDVIHTSNNHR 87 (323)
T ss_pred HHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc--cC---CCchhhHHHHHHHHhCCCcc--eEEEEeeeeeccccc
Confidence 5677999999999999875 45 6778876533321 22 23455779999999988654 222222 1222
Q ss_pred ---CceEEEecCCCCchHHHHHHHcCC-----C----CHHHHHHHHHHHHHHHhcc
Q 048614 109 ---MSLIGMRYLEPPHIILRKGLIAGI-----K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ---~~~~vMEdL~~~~~~lr~~l~~g~-----~----~~~~a~~iG~~La~~h~~t 152 (165)
.-.+|||++. ..|++.+.... . ...+..||-..|+-.|...
T Consensus 88 ~~~~l~lvfe~~d---~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~ 140 (323)
T KOG0594|consen 88 GIGKLYLVFEFLD---RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG 140 (323)
T ss_pred ccceEEEEEEeec---ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4458999997 47777777633 1 2367788888888888754
No 394
>TIGR02905 spore_yutH spore coat protein YutH. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.
Probab=79.45 E-value=23 Score=29.75 Aligned_cols=89 Identities=9% Similarity=-0.145 Sum_probs=56.8
Q ss_pred EEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhcc----CCCCCce----EEEEcCCCceEEEecCCC
Q 048614 48 VYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQL----CPDHVPE----VYHFDRTMSLIGMRYLEP 119 (165)
Q Consensus 48 v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~----~p~~vP~----v~~~D~~~~~~vMEdL~~ 119 (165)
+..|.+++|..|+|.-. ..+.+|......++..+.+- +|..+|. .+.-......++|+.++
T Consensus 21 ~~~~~t~~g~y~Lk~~e----------~~~~~~l~f~~~~~~~L~~~G~~~v~~~i~tk~G~~~~~~~g~~y~L~~w~~- 89 (313)
T TIGR02905 21 YEAFRANNQAYLIVPVD----------GLEEEELAELMAMSDYLQQAGDETVLELVKTKFGQSSALIDGVSYYLFKAPE- 89 (313)
T ss_pred eeeEEeCCceEEEEEec----------CCCHHHHHHHHHHHHHHHHcCCCcccceeecCCCCEeEEECCEEEEEEeCCC-
Confidence 56667777888888754 14457899999999888653 3333331 22233344555566554
Q ss_pred CchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCch
Q 048614 120 PHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTT 160 (165)
Q Consensus 120 ~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~ 160 (165)
|..... ..+|+.||++|..|..|..+..
T Consensus 90 -----------~~~~~~--~~~~~~LA~lH~as~~f~~~~~ 117 (313)
T TIGR02905 90 -----------FNERRG--VDLGRELATFHKRGRQYPRPIW 117 (313)
T ss_pred -----------cccchh--HHHHHHHHHHHHhcCCCCCCcc
Confidence 221111 2999999999999998866543
No 395
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=79.43 E-value=1.9 Score=39.18 Aligned_cols=107 Identities=14% Similarity=0.126 Sum_probs=69.8
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC-CCceEEEEcCC-Cce
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPD-HVPEVYHFDRT-MSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~-~vP~v~~~D~~-~~~ 111 (165)
.++.+|||..--||+...- .| -|-||+-.-+... ..--=+..|..+|+.+.+..-. ..=+ ...|.+ .--
T Consensus 14 ~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s------~ee~~nLREvksL~kln~hpniikL~E-vi~d~~~~L~ 86 (538)
T KOG0661|consen 14 VIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS------WEECMNLREVKSLRKLNPHPNIIKLKE-VIRDNDRILY 86 (538)
T ss_pred HHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc------HHHHHHHHHHHHHHhcCCCCcchhhHH-HhhccCceEe
Confidence 5778999999999999865 44 6777776644432 1223456788888888754111 1122 235666 667
Q ss_pred EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||||.. .+|.+.+... +.+ -++..||=.-|+.+|..+
T Consensus 87 fVfE~Md---~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G 130 (538)
T KOG0661|consen 87 FVFEFMD---CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG 130 (538)
T ss_pred eeHHhhh---hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 8999997 3775544332 223 257788888899999765
No 396
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=78.71 E-value=15 Score=33.28 Aligned_cols=104 Identities=13% Similarity=-0.005 Sum_probs=73.3
Q ss_pred EecCCCceeEEEEEEeCCC------eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 048614 38 KEVGDGNLNFVYIVVGSSG------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTM 109 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~g------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~ 109 (165)
..+|.|+.--||+.....+ .|.||+..---. .-.........||++|+.+.- .+|-++|+ .|.+-
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~----~~~~~~~e~m~EArvMr~l~H---~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE----LTKEQIKEFMKEARVMRQLNH---PNVVRFYGVAVLEEP 235 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeeccccc----ccHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEcCCCc
Confidence 6899999999999987632 267787774111 113445688899999987543 45677777 78899
Q ss_pred ceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHh
Q 048614 110 SLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 110 ~~~vMEdL~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~ 150 (165)
..+|||.++ +..|.+.|.+... . -.++-+.+.=|.-+|.
T Consensus 236 l~ivmEl~~--gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~ 280 (474)
T KOG0194|consen 236 LMLVMELCN--GGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHS 280 (474)
T ss_pred cEEEEEecC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHH
Confidence 999999998 3488898888542 1 1456666666666664
No 397
>PF10309 DUF2414: Protein of unknown function (DUF2414); InterPro: IPR019416 This entry contains proteins that have no known function.
Probab=76.60 E-value=5.9 Score=26.02 Aligned_cols=38 Identities=16% Similarity=0.296 Sum_probs=30.4
Q ss_pred ccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEE
Q 048614 6 FRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYI 50 (165)
Q Consensus 6 ~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~r 50 (165)
=..|+.++|..|+.+. + .......|+=+.|-.+|+||.
T Consensus 13 vd~lsT~dI~~y~~~y--~-----~~~~~~~IEWIdDtScNvvf~ 50 (62)
T PF10309_consen 13 VDELSTDDIKAYFSEY--F-----DEEGPFRIEWIDDTSCNVVFK 50 (62)
T ss_pred CCCCCHHHHHHHHHHh--c-----ccCCCceEEEecCCcEEEEEC
Confidence 3569999999999986 1 133456999999999999985
No 398
>PHA02882 putative serine/threonine kinase; Provisional
Probab=73.41 E-value=32 Score=27.80 Aligned_cols=113 Identities=12% Similarity=-0.002 Sum_probs=57.9
Q ss_pred Ccce-eEecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCC--CCChHHHHHHHHHHHHh---hccCCCCCce
Q 048614 33 DALT-IKEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESW--PMTKERAYFEALALKEH---GQLCPDHVPE 101 (165)
Q Consensus 33 ~~~~-v~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~--~l~~~R~~~E~~~L~~~---~~~~p~~vP~ 101 (165)
..+. .+.+|.|....||++...+ + .+++|...- .. ... .....+...+....+.+ ..+.-..+|.
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~--~~--~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~ 87 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENL--EN--ETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK 87 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccc--cC--CchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence 4564 4468999999999998653 2 456664221 10 100 00111112222222222 2222235677
Q ss_pred EEEEcCC------CceEEEecCCCCchHHHHHHHcCCC-----CHHHHHHHHHHHHHHHhcc
Q 048614 102 VYHFDRT------MSLIGMRYLEPPHIILRKGLIAGIK-----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 102 v~~~D~~------~~~~vMEdL~~~~~~lr~~l~~g~~-----~~~~a~~iG~~La~~h~~t 152 (165)
+|.+... ...++||.+.+ .+++.+..... ...++.++...|+.+|...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 146 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLVE---NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHG 146 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhcc---CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 6654222 23578888863 22232222211 1357889999999999864
No 399
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=73.09 E-value=39 Score=29.67 Aligned_cols=109 Identities=16% Similarity=0.131 Sum_probs=73.2
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~~~~~ 112 (165)
-++.+|-|.---||.|.-.+ + -.-+|+-.-. +++. .-.......|+.+|..... |-.|.-.|.| |++.-.+
T Consensus 29 ~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~-~iv~---~~e~~~~~~Er~IL~~v~h--PFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 29 ILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKK-KIVE---KKEVRHTKAERNILSKIKH--PFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred eeeeeeccCCceEEEEEEcccCceeehhhhhhh-Hhhh---hhhHHHHHHHHHHHHhCCC--CcEeeeEEecccCCeEEE
Confidence 46778889999999997653 2 3444443311 1111 1456788899999988433 8888888866 6677778
Q ss_pred EEecCCCCchHHHHHHHcCCCCH-H----HHHHHHHHHHHHHhcc
Q 048614 113 GMRYLEPPHIILRKGLIAGIKYP-L----LAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~~-~----~a~~iG~~La~~h~~t 152 (165)
|+||++ + ..|...|.+...++ . -+.+|..+|.-+|...
T Consensus 103 Vld~~~-G-GeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~g 145 (357)
T KOG0598|consen 103 VLDYLN-G-GELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKG 145 (357)
T ss_pred EEeccC-C-ccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCC
Confidence 999998 3 46777777544443 2 3567788888888754
No 400
>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]
Probab=71.95 E-value=2.5 Score=36.54 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=36.6
Q ss_pred CCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614 96 PDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 96 p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
.-.||+|+.-|.++..++.||||. -..| +.+ |...++--.+-+..|+.+|-..
T Consensus 81 Gv~vPqIla~Dld~GfllLedLG~-e~~l-~~~--g~~~~ery~~a~~ll~~~h~~~ 133 (351)
T COG3178 81 GVRVPQILAADLDQGFLLLEDLGR-ETFL-QAL--GEPIAERYAAADALLAAAHGAL 133 (351)
T ss_pred CcCccHHhhhchhcCchhHhhcCc-HHHH-Hhc--CCCchhHHHHHHHHHHHHhcCc
Confidence 558999999999999999999993 3333 332 4443333335667777777554
No 401
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=69.42 E-value=25 Score=32.67 Aligned_cols=107 Identities=17% Similarity=0.114 Sum_probs=65.8
Q ss_pred eEecCCCceeEEEEEEeCC-C-eEEEeecCc-cc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCce
Q 048614 37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALP-YV-RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSL 111 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p-~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~ 111 (165)
-+.+|+|--..|||.++.+ + .+-||--.- |+ |- --+.-..+|.++|..+... |+.+=-- -|.|+++--
T Consensus 78 g~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike------~KvkYV~~Ek~~l~~L~~h-PgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 78 GKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKE------KKVKYVTREKEALTQLSGH-PGIVKLYFTFQDEESLY 150 (604)
T ss_pred hheeccccceeEEEeeecCCCceeeHhhhhHHHHHhh------cccchhhHHHHHHHHhhCC-CCeEEEEEEeecccceE
Confidence 3678999999999998752 2 333333221 11 10 0113456788999999854 5543222 256888889
Q ss_pred EEEecCCCCchHHHHHHHc-CCCC----HHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIA-GIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~-g~~~----~~~a~~iG~~La~~h~~t 152 (165)
|||||.+ ++..| +.|.+ |..+ .-.|++|-+.|=-+|...
T Consensus 151 FvLe~A~-nGdll-~~i~K~Gsfde~caR~YAAeIldAleylH~~G 194 (604)
T KOG0592|consen 151 FVLEYAP-NGDLL-DLIKKYGSFDETCARFYAAEILDALEYLHSNG 194 (604)
T ss_pred EEEEecC-CCcHH-HHHHHhCcchHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999998 45444 44444 4432 246778888877777653
No 402
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=69.01 E-value=21 Score=34.15 Aligned_cols=102 Identities=15% Similarity=0.141 Sum_probs=65.5
Q ss_pred EecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEc--------
Q 048614 38 KEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFD-------- 106 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D-------- 106 (165)
..|..|-.-.||.+.+..+ .+.+|.-.--- .-.+.=+..|.++|+.+... |.| =++|
T Consensus 43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d-------e~~L~~v~~EI~~MK~L~gh-----~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVND-------EEALNAVKREIDIMKLLSGH-----KNIVSYIDSSAINRSS 110 (738)
T ss_pred EEEccCCcEEEEEEEecCCCceeeeeeeecCC-------HHHHHHHHHHHHHHHHhcCC-----CceeeEeccccccccC
Confidence 4566777788999998854 67777665221 23456688999999988654 222 2334
Q ss_pred ---CCCceEEEecCCCCchH---HHHHHHcCCC---CHHHHHHHHHHHHHHHhcc
Q 048614 107 ---RTMSLIGMRYLEPPHII---LRKGLIAGIK---YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ---~~~~~~vMEdL~~~~~~---lr~~l~~g~~---~~~~a~~iG~~La~~h~~t 152 (165)
.-..++.||||. ++.. |.+.|..+-. .-.+..++.+.+|.+|...
T Consensus 111 ~~~~~EvllLmEyC~-gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~ 164 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCK-GGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK 164 (738)
T ss_pred CCceeEEEeehhhcc-CCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC
Confidence 234579999998 3322 3333333311 1267788899999999865
No 403
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=68.61 E-value=41 Score=29.78 Aligned_cols=105 Identities=18% Similarity=0.175 Sum_probs=70.1
Q ss_pred eeEecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCC---ceEEEEcCCCc
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHV---PEVYHFDRTMS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v---P~v~~~D~~~~ 110 (165)
.+-.|+.|.--.|||+.+... =|-+|.-..--. ..++|++. ..|..+|...+- |..| =-|..-+-+.-
T Consensus 80 ~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmeke--k~GFPIts---LREIniLl~~~H--~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 80 KLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKE--KEGFPITS---LREINILLKARH--PNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred HHhhcccCcceeEEEeccCCcceeEEeeecccccc--cCCCcchh---HHHHHHHHhcCC--CCeeeeEEEEecccccee
Confidence 566788999999999998743 466676554443 35677776 557777766652 4322 23566777888
Q ss_pred eEEEecCCCCchHHHHHHHcCC-CC-H----HHHHHHHHHHHHHHh
Q 048614 111 LIGMRYLEPPHIILRKGLIAGI-KY-P----LLAEHMSEFMAKTLF 150 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~-~~-~----~~a~~iG~~La~~h~ 150 (165)
-+||||+. ..||..|.... .| + .+..|+-+-+.-+|.
T Consensus 153 y~VMe~~E---hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~ 195 (419)
T KOG0663|consen 153 YIVMEYVE---HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHD 195 (419)
T ss_pred eeeHHHHH---hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhh
Confidence 89999997 37777776654 22 2 355566666666664
No 404
>PHA03210 serine/threonine kinase US3; Provisional
Probab=66.58 E-value=35 Score=30.49 Aligned_cols=111 Identities=9% Similarity=-0.023 Sum_probs=58.9
Q ss_pred eeEecCCCceeEEEEEEeCC--C-eEEEe------ecCccc----cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE
Q 048614 36 TIKEVGDGNLNFVYIVVGSS--G-SFVIK------QALPYV----RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV 102 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~--g-svIvK------qa~p~~----r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v 102 (165)
-+..||.|..-.||++.... + ..++| +..++. ...-..-.-...+...|.++|+.+.. | ++.++
T Consensus 152 ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~H--p-nIv~l 228 (501)
T PHA03210 152 VIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNH--E-NILKI 228 (501)
T ss_pred EEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCC--C-CcCcE
Confidence 45789999999999876432 1 12222 111111 00000001123345677777776643 3 33444
Q ss_pred E--EEcCCCceEEEecCCCCchHHHHHHHcCCC----------CHHHHHHHHHHHHHHHhcc
Q 048614 103 Y--HFDRTMSLIGMRYLEPPHIILRKGLIAGIK----------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 103 ~--~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~----------~~~~a~~iG~~La~~h~~t 152 (165)
+ +.+.+...++||+++ + .+...+..+.. ...++.+|...|.-+|...
T Consensus 229 ~~~~~~~~~~~lv~e~~~--~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g 287 (501)
T PHA03210 229 EEILRSEANTYMITQKYD--F-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK 287 (501)
T ss_pred eEEEEECCeeEEEEeccc--c-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 3 345667788999886 2 23333333221 1147788889999998654
No 405
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=66.19 E-value=48 Score=30.69 Aligned_cols=131 Identities=15% Similarity=0.151 Sum_probs=86.3
Q ss_pred HhhHHHHHHhCCCcccccCC--CCCcc-eeEecCCCceeEEEEEEeCCC-e-E---EEeecCccccccCCCCCCChHHHH
Q 048614 11 DKSLLEYIKATPSLSSKIGN--KFDAL-TIKEVGDGNLNFVYIVVGSSG-S-F---VIKQALPYVRCIGESWPMTKERAY 82 (165)
Q Consensus 11 ~~~v~~Yl~~~~~~~~~~~~--~~~~~-~v~~l~~Gn~N~v~rv~~~~g-s-v---IvKqa~p~~r~~~~~~~l~~~R~~ 82 (165)
.++..||-+.= .=+-++|. .+..+ .++-+|+|....||...+..+ + | |||-|..|.. =..
T Consensus 55 qE~~~dY~kGG-YHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtE-----------aAl 122 (590)
T KOG1290|consen 55 QEDPEDYRKGG-YHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTE-----------AAL 122 (590)
T ss_pred ccChhhhhcCC-CceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHH-----------HHH
Confidence 45678887751 11123454 22344 889999999999999999865 2 3 5666666653 346
Q ss_pred HHHHHHHHhhccCCC-----CCceEEEEcC------CCceEEEecCCCCchHHHHHHH---cCCC---CHHHHHHHHHHH
Q 048614 83 FEALALKEHGQLCPD-----HVPEVYHFDR------TMSLIGMRYLEPPHIILRKGLI---AGIK---YPLLAEHMSEFM 145 (165)
Q Consensus 83 ~E~~~L~~~~~~~p~-----~vP~v~~~D~------~~~~~vMEdL~~~~~~lr~~l~---~g~~---~~~~a~~iG~~L 145 (165)
-|.+.|+.++.--|. +|-+++.+-. .--++|+|+|++ -.||-... +|-. ...++.||-.-|
T Consensus 123 DEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGd--nLLklI~~s~YrGlpl~~VK~I~~qvL~GL 200 (590)
T KOG1290|consen 123 DEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGD--NLLKLIKYSNYRGLPLSCVKEICRQVLTGL 200 (590)
T ss_pred HHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhh--HHHHHHHHhCCCCCcHHHHHHHHHHHHHHH
Confidence 788999999887653 5777775543 234689999993 23332222 2332 247899998889
Q ss_pred HHHHhccccc
Q 048614 146 AKTLFYTSLL 155 (165)
Q Consensus 146 a~~h~~tsd~ 155 (165)
--+|...+-.
T Consensus 201 dYLH~ecgII 210 (590)
T KOG1290|consen 201 DYLHRECGII 210 (590)
T ss_pred HHHHHhcCcc
Confidence 9899876543
No 406
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=66.10 E-value=9.6 Score=33.81 Aligned_cols=105 Identities=21% Similarity=0.265 Sum_probs=67.0
Q ss_pred cCCCceeEEEEEEeCCC-eEEEe-------------ecCccccc--cCCCC-CCChHHHHHHHHHHHHhhccCCCCCceE
Q 048614 40 VGDGNLNFVYIVVGSSG-SFVIK-------------QALPYVRC--IGESW-PMTKERAYFEALALKEHGQLCPDHVPEV 102 (165)
Q Consensus 40 l~~Gn~N~v~rv~~~~g-svIvK-------------qa~p~~r~--~~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v 102 (165)
+|=|-=.-||.|.+..| .+|+| --+.|+|. .+ +| .|+.==+..|..+|+.+..- .-.||++
T Consensus 100 IGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~-sWlyLSRlaa~kEfafmkaL~e~-gfpVPkp 177 (465)
T KOG2268|consen 100 IGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSG-SWLYLSRLAATKEFAFMKALYER-GFPVPKP 177 (465)
T ss_pred cccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCcc-chhhhHHHHHHHHHHHHHHHHHc-CCCCCCc
Confidence 34444445677777655 55554 45566643 22 46 45555567888999998884 4468888
Q ss_pred EEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 048614 103 YHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 103 ~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ 151 (165)
+ |-..|++|||.+. .+ .|++- ..-...|.+...+-.++.++-..
T Consensus 178 i--D~~RH~Vvmelv~-g~-Pl~~v-~~v~d~~~ly~~lm~~Iv~la~~ 221 (465)
T KOG2268|consen 178 I--DHNRHCVVMELVD-GY-PLRQV-RHVEDPPTLYDDLMGLIVRLANH 221 (465)
T ss_pred c--cccceeeHHHhhc-cc-ceeee-eecCChHHHHHHHHHHHHHHHHc
Confidence 8 7779999999997 34 55541 11123357777777777766544
No 407
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=65.56 E-value=47 Score=29.22 Aligned_cols=104 Identities=18% Similarity=0.153 Sum_probs=64.4
Q ss_pred eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCC-c
Q 048614 36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTM-S 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~-~ 110 (165)
.+.++|.||.-.|++|.-.. + =+.+|-- ++.. -+....-...|.++|+.. .-.++-..| ||++.. -
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I--~~~~----~~~~~~Qi~rEl~il~~~---~spyIV~~ygaF~~~~~~i 153 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVI--LLNI----DPALQKQILRELEILRSC---QSPYIVGFYGAFYSNGEEI 153 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCCeEEEEEee--cccC----CHHHHHHHHHHHHHHhhC---CCCCeeeEeEEEEeCCceE
Confidence 77889999999999998763 3 3555544 1211 022223345666677655 233444444 355553 7
Q ss_pred eEEEecCCCCchHHHHHHHc-CCCC----HHHHHHHHHHHHHHHh
Q 048614 111 LIGMRYLEPPHIILRKGLIA-GIKY----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~-g~~~----~~~a~~iG~~La~~h~ 150 (165)
.++|||.+ ...|...+.+ |... ..+|.++=+-|.-+|.
T Consensus 154 sI~mEYMD--gGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~ 196 (364)
T KOG0581|consen 154 SICMEYMD--GGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHE 196 (364)
T ss_pred EeehhhcC--CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 89999997 4577776664 4433 3577777777777774
No 408
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=62.19 E-value=37 Score=32.23 Aligned_cols=102 Identities=17% Similarity=0.095 Sum_probs=68.1
Q ss_pred ceeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cCCCc
Q 048614 35 LTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF---DRTMS 110 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~~~~ 110 (165)
+=++.||.|..--|-.....++ .|-||--+|-.-..+ ..-...|.++|..+.. | .+-+++.. | |-.
T Consensus 541 ~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~------r~~F~kEIkiLsqLkh--P-NIveLvGVC~~D-ePi 610 (807)
T KOG1094|consen 541 RFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNA------RNDFLKEIKILSRLKH--P-NIVELLGVCVQD-DPL 610 (807)
T ss_pred ehhhhhcCcccceeEEEEecCceEEEEeecCcccchhH------HHHHHHHHHHHhccCC--C-CeeEEEeeeecC-Cch
Confidence 3567788888888877777765 777777666554321 2334567777766521 2 34455555 5 567
Q ss_pred eEEEecCCCCchHHHHHHHcCCC-------CHHHHHHHHHHHHHH
Q 048614 111 LIGMRYLEPPHIILRKGLIAGIK-------YPLLAEHMSEFMAKT 148 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g~~-------~~~~a~~iG~~La~~ 148 (165)
.+||||.. ...|+++|++.+. --.+|.+|+.-||-+
T Consensus 611 cmI~EYmE--nGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYL 653 (807)
T KOG1094|consen 611 CMITEYME--NGDLNQFLSAHELPTAETAPGVSICTQIASGMAYL 653 (807)
T ss_pred HHHHHHHh--cCcHHHHHHhccCcccccchhHHHHHHHHHHHHHH
Confidence 78899997 4699999999742 136888888766654
No 409
>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A.
Probab=62.10 E-value=12 Score=30.50 Aligned_cols=42 Identities=19% Similarity=0.356 Sum_probs=32.2
Q ss_pred CCccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCc--eeEEEEEEeC
Q 048614 4 TEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGN--LNFVYIVVGS 54 (165)
Q Consensus 4 ~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn--~N~v~rv~~~ 54 (165)
..|+.+|.+.+..||++. +.++.-++|.+-|+ ++.+|.|.++
T Consensus 39 P~F~n~~~~qAe~~L~~~---------~~Ge~iIRPSSkG~dhL~vTwKv~d~ 82 (220)
T PF14633_consen 39 PLFKNFNYKQAEEYLADQ---------DVGEVIIRPSSKGPDHLTVTWKVADG 82 (220)
T ss_dssp TTEESS-HHHHHHHHCCS----------TT-EEEEE-TTTTTEEEEEEEEETT
T ss_pred CCccCCCHHHHHHHHhcC---------CCCCEEEeeCCCCCCeEEEEEEEcCC
Confidence 468889999999999976 35688999999987 8889988865
No 410
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=60.47 E-value=3.7 Score=29.85 Aligned_cols=59 Identities=15% Similarity=0.144 Sum_probs=45.2
Q ss_pred CcceeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce
Q 048614 33 DALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPE 101 (165)
Q Consensus 33 ~~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~ 101 (165)
++++-+|++.|.+--|+|.++.+| .|+||--.|.++ ++....-+.|+.+..++....|.
T Consensus 12 ~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~----------~~i~~Dl~~l~~~~~~~~~~~~~ 71 (119)
T PF03109_consen 12 DEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIE----------EQIEADLRILRRLARLLERLPPF 71 (119)
T ss_pred HHCCcchhhheehhhheeeeecccchhhhhhcchHHH----------HHHHHHHHHHHHHHHHHHHcccc
Confidence 456778999999999999999877 999999999986 35666667777776664443333
No 411
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=59.72 E-value=41 Score=29.57 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=67.3
Q ss_pred eeEecCCCceeEEEEEEeC-C-CeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----
Q 048614 36 TIKEVGDGNLNFVYIVVGS-S-GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT----- 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~-gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~----- 108 (165)
..+.+|-|....||+.... . +.+.||..++--|- .-.|..+|+...- |..|=-+|+|-..
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-----------knrEl~im~~l~H--pNIV~L~~~f~~~~~~d~ 94 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-----------KNRELQIMRKLDH--PNIVRLLYFFSSSTESDE 94 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-----------CcHHHHHHHhcCC--cCeeeEEEEEEecCCCch
Confidence 6778899999999999875 3 38999998866652 2358888882221 5555555555432
Q ss_pred -CceEEEecCCC-CchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614 109 -MSLIGMRYLEP-PHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 109 -~~~~vMEdL~~-~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
---+||||+|. -+..+|+.-..+... .-..-||-+.|+-+|..
T Consensus 95 ~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~ 144 (364)
T KOG0658|consen 95 VYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH 144 (364)
T ss_pred hHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc
Confidence 23489999983 122333322234432 34678889999999974
No 412
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=55.54 E-value=38 Score=30.93 Aligned_cols=94 Identities=17% Similarity=0.126 Sum_probs=56.2
Q ss_pred EecCCCceeEEEEEEeC-CC-eEEEeecC-ccccccCCCCCCChHHHHHHHHHHHHhhccCCC--CCceEEEEcCCCceE
Q 048614 38 KEVGDGNLNFVYIVVGS-SG-SFVIKQAL-PYVRCIGESWPMTKERAYFEALALKEHGQLCPD--HVPEVYHFDRTMSLI 112 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~-p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~--~vP~v~~~D~~~~~~ 112 (165)
+-+|-|.-.-|=+.... .| -|-||--+ ..++. ..+.-|++.|.++|..++- |. .+-+ .|-+.+--++
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd-----eqDlvhIRREIeIMSsLNH--PhII~IyE-VFENkdKIvi 130 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD-----EQDLVHIRREIEIMSSLNH--PHIIQIYE-VFENKDKIVI 130 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhccc-----HHHHHHHHHHHHHHhhcCC--Cceeehhh-hhcCCceEEE
Confidence 34666666655555442 33 56666433 22221 3678899999999988765 11 1111 2346678899
Q ss_pred EEecCCCCchHHHHHHHcCCCC-HHHHHHH
Q 048614 113 GMRYLEPPHIILRKGLIAGIKY-PLLAEHM 141 (165)
Q Consensus 113 vMEdL~~~~~~lr~~l~~g~~~-~~~a~~i 141 (165)
||||-+ ...|.+.+.+.... ..-|+++
T Consensus 131 vMEYaS--~GeLYDYiSer~~LsErEaRhf 158 (668)
T KOG0611|consen 131 VMEYAS--GGELYDYISERGSLSEREARHF 158 (668)
T ss_pred EEEecC--CccHHHHHHHhccccHHHHHHH
Confidence 999998 34777887764433 3344443
No 413
>PF11588 DUF3243: Protein of unknown function (DUF3243); InterPro: IPR021637 This family of proteins with unknown function includes uncharacterised proteins ymfJ and yflH. The family appears to be restricted to Firmicutes.; PDB: 3D0W_B.
Probab=52.33 E-value=5.6 Score=27.54 Aligned_cols=33 Identities=24% Similarity=0.180 Sum_probs=19.9
Q ss_pred EecCCCCchHHHHHHHc-----------CCCCHHHHHHHHHHHHH
Q 048614 114 MRYLEPPHIILRKGLIA-----------GIKYPLLAEHMSEFMAK 147 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~-----------g~~~~~~a~~iG~~La~ 147 (165)
|+-|. ++..||..|-+ ......+|.+||.|||.
T Consensus 1 M~vl~-nf~~wK~~Lg~~v~~ae~~Gms~e~i~~~A~~iGdyLA~ 44 (81)
T PF11588_consen 1 MSVLE-NFDQWKDFLGDRVEQAEKLGMSEETIANLAYQIGDYLAK 44 (81)
T ss_dssp -HHHH-HHHHHHHHHHHHHHHHHHHHHHTT----HHHHHHHHHHT
T ss_pred CcHhh-hHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHh
Confidence 33444 46778877754 23456799999999985
No 414
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=50.20 E-value=69 Score=26.17 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=62.1
Q ss_pred eeEecCCCceeEEEEEEeCCC-e-EEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEE
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG-S-FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIG 113 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g-s-vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~v 113 (165)
..+.+|+|.-..||...+.+. . |.+| .+|..+.|--.| +-...|.-.|+.+..---...-.++|-| ..-.+|
T Consensus 6 kmekigegtygtvfkarn~~t~eivalk----rvrlddddegvp-ssalreicllkelkhknivrl~dvlhsd-kkltlv 79 (292)
T KOG0662|consen 6 KMEKIGEGTYGTVFKARNRETHEIVALK----RVRLDDDDEGVP-SSALREICLLKELKHKNIVRLHDVLHSD-KKLTLV 79 (292)
T ss_pred HHHhhcCCcceeeEecccCCccceEEEE----EEeccCCCCCCc-HHHHHHHHHHHHhhhcceeehhhhhccC-ceeEEe
Confidence 456789999999999987654 3 4444 455533333333 3566787777776442111223344444 556899
Q ss_pred EecCCCCchHHHHHHH--cCCCCHHHHHHHHH
Q 048614 114 MRYLEPPHIILRKGLI--AGIKYPLLAEHMSE 143 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~--~g~~~~~~a~~iG~ 143 (165)
+|++. +.||+... .|..++.+++..--
T Consensus 80 fe~cd---qdlkkyfdslng~~d~~~~rsfml 108 (292)
T KOG0662|consen 80 FEFCD---QDLKKYFDSLNGDLDPEIVRSFML 108 (292)
T ss_pred HHHhh---HHHHHHHHhcCCcCCHHHHHHHHH
Confidence 99997 57777664 47888888776543
No 415
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=49.06 E-value=19 Score=34.57 Aligned_cols=50 Identities=20% Similarity=0.062 Sum_probs=34.8
Q ss_pred HHHHHHHHHhhccCCCCCceEEE--EcCCCceEEEecCCCCchHHHHHHHcCCCCHH
Q 048614 82 YFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGMRYLEPPHIILRKGLIAGIKYPL 136 (165)
Q Consensus 82 ~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~ 136 (165)
..|..+|..+. ..-|-++|+ -|.++-.|||+|++ + ..|-..|++..+|++
T Consensus 677 KAERDILAEAD---n~WVVrLyySFQDkdnLYFVMdYIP-G-GDmMSLLIrmgIFeE 728 (1034)
T KOG0608|consen 677 KAERDILAEAD---NEWVVRLYYSFQDKDNLYFVMDYIP-G-GDMMSLLIRMGIFEE 728 (1034)
T ss_pred hhhhhhHhhcC---CcceEEEEEEeccCCceEEEEeccC-C-ccHHHHHHHhccCHH
Confidence 34555664432 334667764 58899999999998 3 467788888888763
No 416
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=48.99 E-value=15 Score=32.53 Aligned_cols=62 Identities=21% Similarity=0.318 Sum_probs=37.4
Q ss_pred hhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHH
Q 048614 12 KSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEAL 86 (165)
Q Consensus 12 ~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~ 86 (165)
.++++++++...+ +.+..+---+=||-+||+||..... .+.+.++. ...|.++......|..
T Consensus 204 ~GLL~a~~~~~~L------t~~qk~~l~VMGGEsNYLfr~~~~~-----~~~L~~v~--~~~W~~~~m~~W~~~d 265 (408)
T PF06437_consen 204 HGLLDAFKDSTDL------TPEQKSNLYVMGGESNYLFRYDPES-----PHGLEFVP--REEWLLPEMKTWSEED 265 (408)
T ss_pred HHHHHHHHhccCC------CHHHhcCEEEecccceeEEEecCCC-----CCCeEEcc--HHhccCccccCcCHHH
Confidence 3566666654322 2233344455699999999998763 33333443 3578887766666655
No 417
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=45.52 E-value=32 Score=31.14 Aligned_cols=70 Identities=24% Similarity=0.348 Sum_probs=40.1
Q ss_pred CCceeEEEEEEeCCC-eEEEee----------cCccccccCCCCCCC----------hHHHHHHHH--HHHHhhcc-CCC
Q 048614 42 DGNLNFVYIVVGSSG-SFVIKQ----------ALPYVRCIGESWPMT----------KERAYFEAL--ALKEHGQL-CPD 97 (165)
Q Consensus 42 ~Gn~N~v~rv~~~~g-svIvKq----------a~p~~r~~~~~~~l~----------~~R~~~E~~--~L~~~~~~-~p~ 97 (165)
|--+| ||+++..+| .+.||- ..-|+. | ++.+. .=|.+.|-+ -|+.+++. +|.
T Consensus 155 GKEAN-VYHat~~dG~~~AIKIYKTSILvFKDRdRYV~--G-EfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~ 230 (520)
T KOG2270|consen 155 GKEAN-VYHATEEDGSEFAIKIYKTSILVFKDRDRYVS--G-EFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPC 230 (520)
T ss_pred Cccce-eEeeecCCCceEEEEEEeeeEEEEechhhhcc--c-eeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 44455 899988877 555543 223332 1 12221 224455554 46666554 454
Q ss_pred CCceEEEEcCCCceEEEecCCC
Q 048614 98 HVPEVYHFDRTMSLIGMRYLEP 119 (165)
Q Consensus 98 ~vP~v~~~D~~~~~~vMEdL~~ 119 (165)
.-|..+ .+|++||++||.
T Consensus 231 PePIlL----k~hVLVM~FlGr 248 (520)
T KOG2270|consen 231 PEPILL----KNHVLVMEFLGR 248 (520)
T ss_pred CCceee----ecceEeeeeccC
Confidence 444444 899999999995
No 418
>COG1923 Hfq Uncharacterized host factor I protein [General function prediction only]
Probab=40.97 E-value=33 Score=23.52 Aligned_cols=27 Identities=22% Similarity=0.338 Sum_probs=21.5
Q ss_pred CCceeEEEEEEeCCC-eEEEeecCcccc
Q 048614 42 DGNLNFVYIVVGSSG-SFVIKQALPYVR 68 (165)
Q Consensus 42 ~Gn~N~v~rv~~~~g-svIvKqa~p~~r 68 (165)
.|.-||+-.+...+. .+|.|||...+.
T Consensus 37 ~sfD~f~VlL~~~g~qqlVYKHAISTi~ 64 (77)
T COG1923 37 ESFDNFVVLLKNTGKQQLVYKHAISTIV 64 (77)
T ss_pred EeeeeEEEEEEcCCeeEEEEeeeeeEEc
Confidence 578899977776644 899999998874
No 419
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=37.83 E-value=80 Score=24.01 Aligned_cols=47 Identities=13% Similarity=0.269 Sum_probs=31.8
Q ss_pred ceeEEEEEEeCCCeEEEeecCccccc----cCCCCCCChHHHHHHHHHHHHh
Q 048614 44 NLNFVYIVVGSSGSFVIKQALPYVRC----IGESWPMTKERAYFEALALKEH 91 (165)
Q Consensus 44 n~N~v~rv~~~~gsvIvKqa~p~~r~----~~~~~~l~~~R~~~E~~~L~~~ 91 (165)
-+||-|.+.+.+|.|| +|+-..++- ..+.+.-+.++.++|...|.-|
T Consensus 87 RI~l~Y~L~d~~G~vi-~~g~e~L~Dm~fl~~~~~~~~~d~l~YEk~mL~dW 137 (141)
T PF11454_consen 87 RIELSYTLTDADGKVI-KQGEEKLKDMGFLMRPRRRRSSDPLRYEKAMLDDW 137 (141)
T ss_pred cEEEEEEEECCCCcEE-EecceEEecchhhcCCCCCCCCcccHHHHHHHHHH
Confidence 4677787887766554 778877752 1234455557889999888765
No 420
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=36.35 E-value=1.5e+02 Score=29.48 Aligned_cols=104 Identities=16% Similarity=0.128 Sum_probs=63.6
Q ss_pred EecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 048614 38 KEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRY 116 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEd 116 (165)
.++|.|-=--||++...+| .++||+..|=. .|.+=..+...|.-=++....+.+.+. .|- -.+.+++|+||
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~-----~WEfYI~~q~~~RLk~~~~~~~~~~~~--a~~-~~~~S~lv~ey 775 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPN-----PWEFYICLQVMERLKPQMLPSIMHISS--AHV-FQNASVLVSEY 775 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCC-----ceeeeehHHHHHhhchhhhcchHHHHH--HHc-cCCcceeeeec
Confidence 5788888888999998888 89999988632 366666555554432222222211111 111 24889999999
Q ss_pred CCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhc
Q 048614 117 LEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 117 L~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~ 151 (165)
-+ +..|=+.+...+. + -.++-++...+=.+|..
T Consensus 776 ~~--~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~ 813 (974)
T KOG1166|consen 776 SP--YGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM 813 (974)
T ss_pred cc--cccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc
Confidence 98 5566566653332 1 23566666666666654
No 421
>PRK10963 hypothetical protein; Provisional
Probab=35.81 E-value=22 Score=28.66 Aligned_cols=18 Identities=28% Similarity=0.724 Sum_probs=16.1
Q ss_pred ccCHhhHHHHHHhCCCcc
Q 048614 8 PLDDKSLLEYIKATPSLS 25 (165)
Q Consensus 8 ~l~~~~v~~Yl~~~~~~~ 25 (165)
.||+++|++||+++|.|+
T Consensus 2 ~l~~~~V~~yL~~~PdFf 19 (223)
T PRK10963 2 ELDDRAVVDYLLQNPDFF 19 (223)
T ss_pred CCCHHHHHHHHHHCchHH
Confidence 589999999999999775
No 422
>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes. It is predominantly found in actin-fragmin kinase, it is the catalytic domain that mediates the phosphorylation of actin []. ; PDB: 1CJA_A.
Probab=35.56 E-value=1.2e+02 Score=25.57 Aligned_cols=30 Identities=17% Similarity=0.249 Sum_probs=18.0
Q ss_pred eeEecCCC--ceeEEEEEEeCCC---eEEEeecCc
Q 048614 36 TIKEVGDG--NLNFVYIVVGSSG---SFVIKQALP 65 (165)
Q Consensus 36 ~v~~l~~G--n~N~v~rv~~~~g---svIvKqa~p 65 (165)
+++-...| +.|.+|-++..++ .+|||.+.-
T Consensus 29 sv~~s~~g~ns~gv~fv~~f~~~~~~avViK~s~t 63 (275)
T PF09192_consen 29 SVHHSEHGVNSGGVFFVATFSGSKEEAVVIKFSST 63 (275)
T ss_dssp CEEEEEE-STTS-EEEEEETTE----EEEEE--TT
T ss_pred hHHhhccccCCCCEEEEEEcCCCceEEEEEecCCc
Confidence 56666667 7787877776542 899999863
No 423
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=35.03 E-value=2.4e+02 Score=23.76 Aligned_cols=99 Identities=16% Similarity=0.050 Sum_probs=60.6
Q ss_pred eEecCCCcee-EEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--CCceE
Q 048614 37 IKEVGDGNLN-FVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR--TMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N-~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--~~~~~ 112 (165)
.+.+..|-+- -|||+.-..+ .+.+|++..+... -...|++-|+-++.. .--+|.|..+.. +.--+
T Consensus 23 w~~v~~geS~~~v~rl~a~~r~g~~~k~~~~~~~a----------~L~~Ea~RlrWla~~-~l~~P~V~~~~~~~~~~wL 91 (266)
T COG3231 23 WRRVTEGESGAGVFRLFADSRPGLYLKIASSGPAA----------ELEGEAARLRWLAGQ-GLGCPRVLGLEDDADQAWL 91 (266)
T ss_pred cceeeccCCCCeEEEEeccCCCceEEEEecCcchh----------hhhhHHHHHHHhccc-CCCCCceEeeccCcchhHH
Confidence 3444444443 6899887766 8999998855431 223466666555543 234678877755 66778
Q ss_pred EEecCCC-CchHHHHHHHcCCCCH-HHHHHHHHHHHHHHhc
Q 048614 113 GMRYLEP-PHIILRKGLIAGIKYP-LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdL~~-~~~~lr~~l~~g~~~~-~~a~~iG~~La~~h~~ 151 (165)
+|+-++. +....+. ...| .+...|++.|-.+|..
T Consensus 92 l~salpG~~~s~~~~-----~~~p~r~v~~la~aLR~LH~l 127 (266)
T COG3231 92 LMSALPGEDASHPRY-----ALDPKRAVPLLAEALRRLHEL 127 (266)
T ss_pred hhhhcCCCcccchhh-----cCCHHHHHHHHHHHHHHHhcC
Confidence 8998874 2222222 2333 5677778888888863
No 424
>PF04340 DUF484: Protein of unknown function, DUF484; InterPro: IPR007435 This family consists of several proteins of uncharacterised function.; PDB: 3E98_B.
Probab=34.82 E-value=5.7 Score=31.91 Aligned_cols=21 Identities=19% Similarity=0.453 Sum_probs=0.0
Q ss_pred CccccCHhhHHHHHHhCCCcc
Q 048614 5 EFRPLDDKSLLEYIKATPSLS 25 (165)
Q Consensus 5 ~~~~l~~~~v~~Yl~~~~~~~ 25 (165)
....||+++|++||+++|-|.
T Consensus 2 ~~~~l~~~~V~~yL~~~PdFf 22 (225)
T PF04340_consen 2 TTDALDAEDVAAYLRQHPDFF 22 (225)
T ss_dssp ---------------------
T ss_pred ccccCCHHHHHHHHHhCcHHH
Confidence 446799999999999999775
No 425
>PF10009 DUF2252: Uncharacterized protein conserved in bacteria (DUF2252); InterPro: IPR018721 This domain has no known function.
Probab=32.55 E-value=1.9e+02 Score=25.34 Aligned_cols=115 Identities=15% Similarity=0.136 Sum_probs=65.0
Q ss_pred cceeEecCCC---ceeEEEEEEeCCC---e--EEEeecCcc-----ccccCCCC---CCChHHHHHHHHHHHHhhccCCC
Q 048614 34 ALTIKEVGDG---NLNFVYIVVGSSG---S--FVIKQALPY-----VRCIGESW---PMTKERAYFEALALKEHGQLCPD 97 (165)
Q Consensus 34 ~~~v~~l~~G---n~N~v~rv~~~~g---s--vIvKqa~p~-----~r~~~~~~---~l~~~R~~~E~~~L~~~~~~~p~ 97 (165)
++..+..|=| .-.|+..+...+. . +=||||.+= +....|.| .-.-+|...=++.|+......=+
T Consensus 216 Dva~rv~G~GSlG~~ry~vLl~g~~~~~d~liLqvKeA~~s~~~~~~~~~~p~~~~~~~~g~RVV~~Qr~lq~~sD~~LG 295 (385)
T PF10009_consen 216 DVARRVVGVGSLGTRRYYVLLEGKGDGDDPLILQVKEARPSVLEPYVPATQPAWSPYPHEGQRVVAGQRALQAASDPFLG 295 (385)
T ss_pred EEEEEEecccCCchhheeeEEecCCCCCCceEEEEeccccccchhhhhhhcccCCCCCCcHHHHHHHHHHHhhcCCcccC
Confidence 4444445544 4457777776632 2 568999843 32222344 56677777777778766553111
Q ss_pred CCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 048614 98 HVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 98 ~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd 154 (165)
.+ .++ ....+|-|--+- -..+.-.-++...+...|+.+|..||+.|..|.+
T Consensus 296 ~~----~~~-g~~f~VRql~p~-k~~~d~~~l~~~~~~~~a~~~g~~lA~aHars~~ 346 (385)
T PF10009_consen 296 WV----TID-GRDFYVRQLRPM-KGSVDLEDLDPEELQDYARLCGRALARAHARSDD 346 (385)
T ss_pred ce----eeC-CceEEEEECCCc-CCCcChhhCCHHHHHHHHHHHHHHHHHHHhcCCh
Confidence 10 111 245566665442 1122212224445678999999999999999654
No 426
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=32.50 E-value=1e+02 Score=29.49 Aligned_cols=96 Identities=19% Similarity=0.236 Sum_probs=60.7
Q ss_pred CCcc-eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHH--HHHHhhccCCCCCceEEEE---
Q 048614 32 FDAL-TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEAL--ALKEHGQLCPDHVPEVYHF--- 105 (165)
Q Consensus 32 ~~~~-~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~--~L~~~~~~~p~~vP~v~~~--- 105 (165)
++.+ +++-+|-|-=-.||+....+.+|-||.- |...|.+ =|+.+.- |.|+-|
T Consensus 123 Fe~IsELeWlGSGaQGAVF~Grl~netVAVKKV----------------~elkETdIKHLRkLkH------~NII~FkGV 180 (904)
T KOG4721|consen 123 FEEISELEWLGSGAQGAVFLGRLHNETVAVKKV----------------RELKETDIKHLRKLKH------PNIITFKGV 180 (904)
T ss_pred HHHhhhhhhhccCcccceeeeeccCceehhHHH----------------hhhhhhhHHHHHhccC------cceeeEeee
Confidence 3444 6777899999999999998778887742 3333443 3544422 111111
Q ss_pred --cCCCceEEEecCCCCchHHHHHHHcCCCC-HH----HHHHHHHHHHHHHhc
Q 048614 106 --DRTMSLIGMRYLEPPHIILRKGLIAGIKY-PL----LAEHMSEFMAKTLFY 151 (165)
Q Consensus 106 --D~~~~~~vMEdL~~~~~~lr~~l~~g~~~-~~----~a~~iG~~La~~h~~ 151 (165)
-..-+.|||||++ +..|...|.+|+.. |. -...|+.-|--+|.+
T Consensus 181 CtqsPcyCIiMEfCa--~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~h 231 (904)
T KOG4721|consen 181 CTQSPCYCIIMEFCA--QGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLH 231 (904)
T ss_pred ecCCceeEEeeeccc--cccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHh
Confidence 1123579999998 56888888888753 43 345566666666654
No 427
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=31.54 E-value=71 Score=28.62 Aligned_cols=107 Identities=14% Similarity=0.077 Sum_probs=64.9
Q ss_pred CCcceeEecCCCceeEEEEEEeCC---C--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EE
Q 048614 32 FDALTIKEVGDGNLNFVYIVVGSS---G--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HF 105 (165)
Q Consensus 32 ~~~~~v~~l~~Gn~N~v~rv~~~~---g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~ 105 (165)
+.-..+..+|.|....||...+-. + .|-+|.-. ....+.|...|-++|..++.-. ..++-.. +-
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~---------~ts~p~ri~~El~~L~~~gG~~-ni~~~~~~~r 105 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIY---------RTSSPSRILNELEMLYRLGGSD-NIIKLNGCFR 105 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeecc---------cccCchHHHHHHHHHHHhccch-hhhcchhhhc
Confidence 344578888899888887776543 2 45555432 2345689999999998886631 1122111 22
Q ss_pred cCCCceEEEecCCCCchHHHHHHHcCCCCH---HHHHHHHHHHHHHHhc
Q 048614 106 DRTMSLIGMRYLEPPHIILRKGLIAGIKYP---LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~---~~a~~iG~~La~~h~~ 151 (165)
..++-++||||++ +...++.+..=. ++ .-...+-..|+.+|..
T Consensus 106 nnd~v~ivlp~~~--H~~f~~l~~~l~-~~~i~~Yl~~ll~Al~~~h~~ 151 (418)
T KOG1167|consen 106 NNDQVAIVLPYFE--HDRFRDLYRSLS-LAEIRWYLRNLLKALAHLHKN 151 (418)
T ss_pred cCCeeEEEecccC--ccCHHHHHhcCC-HHHHHHHHHHHHHHhhhhhcc
Confidence 4578899999998 556666554322 22 2334455566666654
No 428
>cd03527 RuBisCO_small Ribulose bisphosphate carboxylase/oxygenase (Rubisco), small subunit. Rubisco is a bifunctional enzyme catalyzes the initial steps of two opposing metabolic pathways: photosynthetic carbon fixation and the competing process of photorespiration. Rubisco Form I, present in plants and green algae, is composed of eight large and eight small subunits. The nearly identical small subunits are encoded by a family of nuclear genes. After translation, the small subunits are translocated across the chloroplast membrane, where an N-terminal signal peptide is cleaved off. While the large subunits contain the catalytic activities, it has been shown that the small subunits are important for catalysis by enhancing the catalytic rate through inducing conformational changes in the large subunits.
Probab=31.52 E-value=48 Score=23.69 Aligned_cols=46 Identities=24% Similarity=0.278 Sum_probs=35.6
Q ss_pred CCCCChHHHHHHHHHHHHhhcc---CCCCCceEEEEcCCCceEEEecCC
Q 048614 73 SWPMTKERAYFEALALKEHGQL---CPDHVPEVYHFDRTMSLIGMRYLE 118 (165)
Q Consensus 73 ~~~l~~~R~~~E~~~L~~~~~~---~p~~vP~v~~~D~~~~~~vMEdL~ 118 (165)
.|.+|.=-+.-++++|..+.+. -|+.--+++.||+.....+||.+-
T Consensus 48 mwklP~f~~~d~~~Vl~ei~~C~~~~p~~YVRliG~D~~~q~~~~~fIv 96 (99)
T cd03527 48 MWKLPMFGCTDPAQVLREIEACRKAYPDHYVRVVGFDNYKQSQCMSFIV 96 (99)
T ss_pred eccCCCCCCCCHHHHHHHHHHHHHHCCCCeEEEEEEeCCccEEEEEEEe
Confidence 4567775566677777777663 488888999999999999999763
No 429
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=31.42 E-value=85 Score=26.51 Aligned_cols=104 Identities=13% Similarity=0.164 Sum_probs=51.6
Q ss_pred EecCCCceeEEEEEEeCCC--eEEEeecC-ccccccCCCCCCChHHHHHHHHHHHHhhccCCCC-CceEEEEcCCCceEE
Q 048614 38 KEVGDGNLNFVYIVVGSSG--SFVIKQAL-PYVRCIGESWPMTKERAYFEALALKEHGQLCPDH-VPEVYHFDRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rv~~~~g--svIvKqa~-p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~-vP~v~~~D~~~~~~v 113 (165)
+++|.|-.--||...-... =+-+|-+- ..+...+- ..-.+.|.++=..+.. |.. ----|++|...-.++
T Consensus 28 r~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v-----~~qlrREiEIqs~L~h--pnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 28 RPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQV-----EHQLRREIEIQSHLRH--PNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred ccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcc-----hhhhhheeEeecccCC--ccHHhhhhheeccceeEEE
Confidence 5788888888999886644 34445433 11111100 0111112221110000 110 012378999999999
Q ss_pred EecCCCCchHHHHHHHcC--CCC-H----HHHHHHHHHHHHHHh
Q 048614 114 MRYLEPPHIILRKGLIAG--IKY-P----LLAEHMSEFMAKTLF 150 (165)
Q Consensus 114 MEdL~~~~~~lr~~l~~g--~~~-~----~~a~~iG~~La~~h~ 150 (165)
+||.+ +.... ..|.+| +.+ . ....+++.+|.-.|.
T Consensus 101 lEya~-~gel~-k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~ 142 (281)
T KOG0580|consen 101 LEYAP-RGELY-KDLQEGRMKRFDEQRAATYIKQLANALLYCHL 142 (281)
T ss_pred EEecC-CchHH-HHHHhcccccccccchhHHHHHHHHHHHHhcc
Confidence 99999 55444 445532 222 2 344555555555543
No 430
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=30.57 E-value=66 Score=30.80 Aligned_cols=110 Identities=15% Similarity=0.192 Sum_probs=64.2
Q ss_pred eeEecCCCceeEEEEEEeCCC--eEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCC-ceEEEEcCCCce
Q 048614 36 TIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDHV-PEVYHFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v-P~v~~~D~~~~~ 111 (165)
.+++||.|....||-..+... .|-||--- |. +-.-+-| .-+..|..+|+.+.- |..+ -+--+.-+-..-
T Consensus 30 dLrEIGHGSFGAVYfArd~~n~evVAIKKMs-ySGKQs~EKW----qDIlKEVrFL~~l~H--PntieYkgCyLre~TaW 102 (948)
T KOG0577|consen 30 DLREIGHGSFGAVYFARDVRNSEVVAIKKMS-YSGKQSNEKW----QDILKEVRFLRQLRH--PNTIEYKGCYLREHTAW 102 (948)
T ss_pred HHHHhcCCccceeEEeeccCccceeeeeecc-ccccccHHHH----HHHHHHHHHHHhccC--CCcccccceeeccchHH
Confidence 789999999999999998744 56666432 32 1111224 367788888887654 2211 111122346677
Q ss_pred EEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcc
Q 048614 112 IGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdL~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~t 152 (165)
+|||||=+....+-+-..++-. ...++...-.-||-+|.++
T Consensus 103 LVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~ 146 (948)
T KOG0577|consen 103 LVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN 146 (948)
T ss_pred HHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 8999987544555454444432 2234444455566666543
No 431
>cd00307 RuBisCO_small_like Ribulose bisphosphate carboxylase/oxygenase (Rubisco), small subunit and related proteins. Rubisco is a bifunctional enzyme catalyzes the initial steps of two opposing metabolic pathways: photosynthetic carbon fixation and the competing process of photorespiration. Rubisco Form I, present in plants and green algae, is composed of eight large and eight small subunits. The nearly identical small subunits are encoded by a family of nuclear genes. After translation, the small subunits are translocated across the chloroplast membrane, where an N-terminal signal peptide is cleaved off. While the large subunits contain the catalytic activities, it has been shown that the small subunits are important for catalysis by enhancing the catalytic rate through inducing conformational changes in the large subunits. This superfamily also contains specific proteins from cyanobacteria. CcmM plays a role in a CO2 concentrating mechanism, which cyanobacteria need to to overcome t
Probab=27.87 E-value=1.1e+02 Score=21.25 Aligned_cols=46 Identities=13% Similarity=-0.061 Sum_probs=34.5
Q ss_pred CCCCChHHH--HHHHHHHHHhhcc---CCCCCceEEEEcCCCceEEEecCC
Q 048614 73 SWPMTKERA--YFEALALKEHGQL---CPDHVPEVYHFDRTMSLIGMRYLE 118 (165)
Q Consensus 73 ~~~l~~~R~--~~E~~~L~~~~~~---~p~~vP~v~~~D~~~~~~vMEdL~ 118 (165)
.|.+|.--+ ..++++|..+.+. -|+.--+++.||+..-..+||.+-
T Consensus 31 ~w~lp~f~~~~~~~~~Vl~el~~c~~~~p~~YVRlig~D~~~q~~~~~fIv 81 (84)
T cd00307 31 SSWQSCGPIEGRSEAQVLAALEACLAEHPGEYVRLIGIDPKAKRRVLEIII 81 (84)
T ss_pred hhcCCCCCCCCCCHHHHHHHHHHHHHHCCCCeEEEEEEeCCccEEEEEEEe
Confidence 455555444 6677777777663 588888999999999999999763
No 432
>PF09162 Tap-RNA_bind: Tap, RNA-binding; InterPro: IPR015245 This domain adopts a structure consisting of an alpha+beta sandwich with an antiparallel beta-sheet, arranged in a 2(beta-alpha-beta) motif. It is mainly found in mRNA export factors, which mediate the sequence nonspecific nuclear export of cellular mRNAs as well as the sequence-specific export of retroviral mRNAs bearing the constitutive transport element []. ; GO: 0003723 RNA binding, 0006406 mRNA export from nucleus, 0005634 nucleus, 0005737 cytoplasm; PDB: 1FT8_A 1KOH_C 1KOO_C 3RW6_B 3RW7_C 1FO1_A.
Probab=27.72 E-value=61 Score=22.71 Aligned_cols=32 Identities=13% Similarity=0.280 Sum_probs=23.7
Q ss_pred HHHHhhccCC-CCCceEEEEcCCCceEEEecCC
Q 048614 87 ALKEHGQLCP-DHVPEVYHFDRTMSLIGMRYLE 118 (165)
Q Consensus 87 ~L~~~~~~~p-~~vP~v~~~D~~~~~~vMEdL~ 118 (165)
.|+.++.+|| .++|.-++|+.....|-.||..
T Consensus 23 Ll~~iq~~c~v~F~Pv~fh~~~~~a~FfV~D~~ 55 (88)
T PF09162_consen 23 LLNSIQSHCSVPFTPVDFHYEKNRAQFFVEDAS 55 (88)
T ss_dssp HHHHHHHHSSS----EEEEEETTEEEEEESSHH
T ss_pred HHHHHHHHCCCCeeeeeeeeeCCEEEEEeCCHH
Confidence 4777788998 6899999999999888888765
No 433
>COG1949 Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
Probab=27.46 E-value=43 Score=26.49 Aligned_cols=55 Identities=25% Similarity=0.284 Sum_probs=37.9
Q ss_pred eEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCC---------------hHHHHHHHHHHHHhhccCCC
Q 048614 37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMT---------------KERAYFEALALKEHGQLCPD 97 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~---------------~~R~~~E~~~L~~~~~~~p~ 97 (165)
+.-+.|||+|.+ ..| .++|.|....+.. ..+|-.. ..-...|...|.++.+.+|.
T Consensus 29 A~iVTD~~Lnil-----aegp~~~Ihq~~e~L~~-Mdew~~~~H~~sGL~~rV~~S~~t~~~aE~~~l~flkkwvp~ 99 (184)
T COG1949 29 ATIVTDANLNIL-----AEGPVIAIHQSDEQLAK-MDEWNTETHGRSGLTERVKASTVTEAEAEAQTLDFLKKWVPK 99 (184)
T ss_pred EEEEecCccccc-----ccCceEEEeCCHHHHHH-HHHHHHHccccccHHHHHHHhhccHHHHHHHHHHHHHHhCCC
Confidence 455679999987 556 7899999888764 2455332 22345677788888887764
No 434
>COG4957 Predicted transcriptional regulator [Transcription]
Probab=26.21 E-value=63 Score=24.66 Aligned_cols=22 Identities=14% Similarity=0.072 Sum_probs=18.8
Q ss_pred CCceEEEecCCCCchHHHHHHHc
Q 048614 108 TMSLIGMRYLEPPHIILRKGLIA 130 (165)
Q Consensus 108 ~~~~~vMEdL~~~~~~lr~~l~~ 130 (165)
+.+++.+||-. .|+.||..|..
T Consensus 74 pD~IicLEDGk-kfKSLKRHL~t 95 (148)
T COG4957 74 PDYIICLEDGK-KFKSLKRHLTT 95 (148)
T ss_pred CCeEEEeccCc-chHHHHHHHhc
Confidence 46789999998 69999998876
No 435
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=25.54 E-value=1.5e+02 Score=26.35 Aligned_cols=73 Identities=7% Similarity=0.035 Sum_probs=45.6
Q ss_pred CChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceEEEecCCCCchHHHHHHHcCCCC-HH----HHHHHHHHHHHHH
Q 048614 76 MTKERAYFEALALKEHGQLCPDHVP-EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKY-PL----LAEHMSEFMAKTL 149 (165)
Q Consensus 76 l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~-~~----~a~~iG~~La~~h 149 (165)
-...|...|.+.+...... ++.+- --++-|++++-+|||-+. ++..| ..+.+.+.| .. +...|+..|-=+|
T Consensus 117 HsR~RvfREVe~f~~Cqgh-~nilqLiefFEdd~~FYLVfEKm~-GGplL-shI~~~~~F~E~EAs~vvkdia~aLdFlH 193 (463)
T KOG0607|consen 117 HSRSRVFREVETFYQCQGH-KNILQLIEFFEDDTRFYLVFEKMR-GGPLL-SHIQKRKHFNEREASRVVKDIASALDFLH 193 (463)
T ss_pred hHHHHHHHHHHHHHHhcCC-ccHHHHHHHhcccceEEEEEeccc-CchHH-HHHHHhhhccHHHHHHHHHHHHHHHHHHh
Confidence 3456999999988766553 21111 124668899999999998 56565 555555544 23 4445555555555
Q ss_pred hc
Q 048614 150 FY 151 (165)
Q Consensus 150 ~~ 151 (165)
..
T Consensus 194 ~k 195 (463)
T KOG0607|consen 194 TK 195 (463)
T ss_pred hc
Confidence 43
No 436
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=24.87 E-value=4.6e+02 Score=23.53 Aligned_cols=70 Identities=20% Similarity=0.128 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHhhccCCCC-CceEEE---EcCCCce-EEEecCCCCchHHHHHHHcCCC--CH-----HHHHHHHHHH
Q 048614 78 KERAYFEALALKEHGQLCPDH-VPEVYH---FDRTMSL-IGMRYLEPPHIILRKGLIAGIK--YP-----LLAEHMSEFM 145 (165)
Q Consensus 78 ~~R~~~E~~~L~~~~~~~p~~-vP~v~~---~D~~~~~-~vMEdL~~~~~~lr~~l~~g~~--~~-----~~a~~iG~~L 145 (165)
.+=+++|.++|+.+++-.|.. .=.+.- ||--+++ +|.|-++ ..+.++|-+++- || .+|.|+-..+
T Consensus 129 reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG---~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv 205 (415)
T KOG0671|consen 129 REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLG---LSTFDFLKENNYIPFPIDHIRHMGYQLLESV 205 (415)
T ss_pred hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccC---hhHHHHhccCCccccchHHHHHHHHHHHHHH
Confidence 355788999999998877753 333444 7888887 5666665 477798988663 33 4677777777
Q ss_pred HHHHh
Q 048614 146 AKTLF 150 (165)
Q Consensus 146 a~~h~ 150 (165)
+-+|.
T Consensus 206 ~fLh~ 210 (415)
T KOG0671|consen 206 AFLHD 210 (415)
T ss_pred HHHHh
Confidence 77774
No 437
>PRK01379 cyaY frataxin-like protein; Provisional
Probab=23.75 E-value=97 Score=22.25 Aligned_cols=26 Identities=19% Similarity=0.298 Sum_probs=16.7
Q ss_pred cceeEecCCCceeEEEEEEeCCCe-EEEeecC
Q 048614 34 ALTIKEVGDGNLNFVYIVVGSSGS-FVIKQAL 64 (165)
Q Consensus 34 ~~~v~~l~~Gn~N~v~rv~~~~gs-vIvKqa~ 64 (165)
++.++ .+||+++.. ..+|+ ||=||..
T Consensus 29 d~D~e-~~~gVLtl~----~~~gt~VINkQ~p 55 (103)
T PRK01379 29 SIDVD-LQGDILNLD----TDKGIYVINKQSA 55 (103)
T ss_pred ceeee-ccCCEEEEE----eCCcEEEEeCCCh
Confidence 45555 679998865 34565 4447766
No 438
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=23.62 E-value=3.4e+02 Score=24.40 Aligned_cols=98 Identities=18% Similarity=0.174 Sum_probs=48.2
Q ss_pred eEecCCCceeEEEEEEe--CCCeEEEeecCccccccCCCCCCChHHH--HHHHHHHHHhhccCCCCCceEEEE-----cC
Q 048614 37 IKEVGDGNLNFVYIVVG--SSGSFVIKQALPYVRCIGESWPMTKERA--YFEALALKEHGQLCPDHVPEVYHF-----DR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~--~~gsvIvKqa~p~~r~~~~~~~l~~~R~--~~E~~~L~~~~~~~p~~vP~v~~~-----D~ 107 (165)
++.+|-|-.--++.|.- .+..+|+|.-. .. -.-..+|. ..|...+... .-|-++.| +.
T Consensus 9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~----l~---~~t~~~r~~A~~E~~lis~~------~hP~iv~y~ds~~~~ 75 (426)
T KOG0589|consen 9 LRQVGRGAFGSALLVRHKSDDKLYVLKKIN----LE---KLTEPERRSAIQEMDLLSKL------LHPNIVEYKDSFEED 75 (426)
T ss_pred hhhcCccccchhhhhhhccCCceEEEEEEe----cc---ccCchhhHHHHHHHHHHHhc------cCCCeeeeccchhcC
Confidence 44555555554444433 23378888754 11 12223343 2333344432 22333333 34
Q ss_pred CC-ceEEEecCCCCchHHHHHHHc--CCCCHH-----HHHHHHHHHHHHH
Q 048614 108 TM-SLIGMRYLEPPHIILRKGLIA--GIKYPL-----LAEHMSEFMAKTL 149 (165)
Q Consensus 108 ~~-~~~vMEdL~~~~~~lr~~l~~--g~~~~~-----~a~~iG~~La~~h 149 (165)
+. -.|||+|+. +.++.+.+.+ |..+|+ .--||-..+..+|
T Consensus 76 ~~~l~Ivm~Y~e--Gg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH 123 (426)
T KOG0589|consen 76 GQLLCIVMEYCE--GGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH 123 (426)
T ss_pred CceEEEEEeecC--CCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 45 789999997 3466666655 345553 2233444444455
No 439
>PF00101 RuBisCO_small: Ribulose bisphosphate carboxylase, small chain; InterPro: IPR000894 RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) is a bifunctional enzyme that catalyses both the carboxylation and oxygenation of ribulose-1,5-bisphosphate (RuBP) [], thus fixing carbon dioxide as the first step of the Calvin cycle. RuBisCO is the major protein in the stroma of chloroplasts, and in higher plants exists as a complex of 8 large and 8 small subunits. The function of the small subunit is unknown []. While the large subunit is coded for by a single gene, the small subunit is coded for by several different genes, which are distributed in a tissue specific manner. They are transcriptionally regulated by light receptor phytochrome [], which results in RuBisCO being more abundant during the day when it is required. The RuBisCo small subunit consists of a central four-stranded beta-sheet, with two helices packed against it [].; PDB: 1BWV_W 1IWA_P 3AXM_X 1WDD_S 3AXK_T 1IR2_K 1RBL_N 1UZH_J 1RSC_P 1UW9_C ....
Probab=23.31 E-value=46 Score=23.77 Aligned_cols=44 Identities=16% Similarity=0.193 Sum_probs=34.4
Q ss_pred CCCChHHHHHHHHHHHHhhcc---CCCCCceEEEEcCCCceEEEecC
Q 048614 74 WPMTKERAYFEALALKEHGQL---CPDHVPEVYHFDRTMSLIGMRYL 117 (165)
Q Consensus 74 ~~l~~~R~~~E~~~L~~~~~~---~p~~vP~v~~~D~~~~~~vMEdL 117 (165)
|.+|.=-+..+.++|..+.+. -|+.--+++.||+..-..+||.+
T Consensus 48 W~~p~~~~~~~~~Vl~el~~c~~~~p~~yVRlig~D~~~q~r~~~~i 94 (99)
T PF00101_consen 48 WKLPMFGCTDPAQVLAELEACLAEHPGEYVRLIGFDNKRQRRVLEFI 94 (99)
T ss_dssp ESSEBTTBSSHHHHHHHHHHHHHHSTTSEEEEEEEETTTTEEEEEEE
T ss_pred CCCCCcCCCCHHHHHHHHHHHHHhCCCceEEEEEEcCcccEEEEEEE
Confidence 566666666777777776653 58888899999999999999976
No 440
>PF03485 Arg_tRNA_synt_N: Arginyl tRNA synthetase N terminal domain; InterPro: IPR005148 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This domain is found at the N terminus of Arginyl tRNA synthetase, also called additional domain 1 (Add-1). It is about 140 residues long and it has been suggested that this domain will be involved in tRNA recognition [].; GO: 0000166 nucleotide binding, 0004814 arginine-tRNA ligase activity, 0005524 ATP binding, 0006420 arginyl-tRNA aminoacylation, 0005737 cytoplasm; PDB: 1F7V_A 1F7U_A 1BS2_A 2ZUE_A 2ZUF_A 1IQ0_A 3GDZ_B.
Probab=23.25 E-value=80 Score=21.06 Aligned_cols=32 Identities=22% Similarity=0.365 Sum_probs=17.8
Q ss_pred CHhhHHHHHHhCCCcccccCCCCCcc-eeEecCCCceeEE
Q 048614 10 DDKSLLEYIKATPSLSSKIGNKFDAL-TIKEVGDGNLNFV 48 (165)
Q Consensus 10 ~~~~v~~Yl~~~~~~~~~~~~~~~~~-~v~~l~~Gn~N~v 48 (165)
++..++.-|.+.- . ....+ +++..|-|++|+.
T Consensus 52 ~P~~iA~~i~~~l------~-~~~~i~~vev~gpGFiN~~ 84 (85)
T PF03485_consen 52 NPREIAEEIAEKL------E-KSPIIEKVEVAGPGFINFF 84 (85)
T ss_dssp -HHHHHHHHHHCH------C-TTTTEEEEEEETTTEEEEE
T ss_pred CHHHHHHHHHHhc------C-CCCCEEEEEEcCCcEEEEe
Confidence 5556666555431 0 12225 6666677999975
No 441
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=22.59 E-value=55 Score=28.42 Aligned_cols=52 Identities=19% Similarity=0.276 Sum_probs=38.9
Q ss_pred eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhc
Q 048614 37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQ 93 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~ 93 (165)
=+++|=|-...||-|+++ +| .+-+|.-+.+-.. ..+..|...|...|.++.-
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~-----L~s~krvFre~kmLcfFkH 111 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQN-----LASCKRVFREIKMLSSFRH 111 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHH-----HHHHHHHHHHHHHHHhhcc
Confidence 368999999999999998 44 6666765544321 3566899999999888743
No 442
>TIGR02383 Hfq RNA chaperone Hfq. This model represents the RNA-binding pleiotropic regulator Hfq, a small, Sm-like protein of bacteria. It helps pair regulatory noncoding RNAs with complementary mRNA target regions. It enhances the elongation of poly(A) tails on mRNA. It appears also to protect RNase E recognition sites (A/U-rich sequences with adjacent stem-loop structures) from cleavage. Being pleiotropic, it differs in some of its activities in different species. Hfq binds the non-coding regulatory RNA DsrA (see Rfam RF00014) in the few species known to have it: Escherichia coli, Shigella flexneri, Salmonella spp. In Azorhizobium caulinodans, an hfq mutant is unable to express nifA, and Hfq is called NrfA, for nif regulatory factor (see PubMed:8197116). The name hfq reflects phenomenology as a host factor for phage Q-beta RNA replication.
Probab=22.54 E-value=1.1e+02 Score=19.90 Aligned_cols=25 Identities=16% Similarity=0.287 Sum_probs=18.2
Q ss_pred CceeEEEEEEeCCC-eEEEeecCccc
Q 048614 43 GNLNFVYIVVGSSG-SFVIKQALPYV 67 (165)
Q Consensus 43 Gn~N~v~rv~~~~g-svIvKqa~p~~ 67 (165)
|.=||+-.+...++ .+|.|||...+
T Consensus 34 ~fD~ftVll~~~g~qqLIYKhAISTI 59 (61)
T TIGR02383 34 SFDNFTVLLESQGKQQLIYKHAISTI 59 (61)
T ss_pred EEeeeEEEEEECCcEEEEEEEEEEEE
Confidence 55678877776655 79999997654
No 443
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=22.18 E-value=4.2e+02 Score=23.21 Aligned_cols=105 Identities=19% Similarity=0.159 Sum_probs=62.6
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEee----cCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQ----ALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKq----a~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~ 108 (165)
.+.-+|-|..--|-.|... +| -.-+|. -.-.++ -.+-...|..+|+... .|-.+=-. -+.|..
T Consensus 48 ~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklK--------QveH~~nEk~vL~~v~--~PFlv~l~~t~~d~~ 117 (355)
T KOG0616|consen 48 RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLK--------QVEHTHNEKRVLKAVS--HPFLVKLYGTFKDNS 117 (355)
T ss_pred heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHH--------HHHHHhhHHHHHhhcc--CceeEEEEEeeccCC
Confidence 5677888888888888765 33 233333 222222 2356778888888776 34332211 245778
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
+-.+||||++ ++. |=..|.+-..++ -.|++|-.+|--+|...
T Consensus 118 ~lymvmeyv~-GGE-lFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~ 164 (355)
T KOG0616|consen 118 NLYMVMEYVP-GGE-LFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLD 164 (355)
T ss_pred eEEEEEeccC-Ccc-HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcC
Confidence 8889999998 443 334444433332 25677777777777643
No 444
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=22.00 E-value=1.2e+02 Score=26.61 Aligned_cols=105 Identities=15% Similarity=0.180 Sum_probs=62.3
Q ss_pred eeEecCCCceeEEEEEEeC-CC-eEEEeecC-ccccccCCCCCCChHHHHHHHHHHHHhhc--cC---CCCCceEEEEcC
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQAL-PYVRCIGESWPMTKERAYFEALALKEHGQ--LC---PDHVPEVYHFDR 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~-p~~r~~~~~~~l~~~R~~~E~~~L~~~~~--~~---p~~vP~v~~~D~ 107 (165)
.++++|.|--+.|....+. +| +|.||--. |+-. ..+..|+..|-..|+.+.- +. -...|... |.
T Consensus 26 ~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~------~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~--~~ 97 (359)
T KOG0660|consen 26 LIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFEN------QIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR--DK 97 (359)
T ss_pred ccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhc------hHHHHHHHHHHHHHHHhcCCCcceEEeecccccc--cc
Confidence 4899999999999887765 45 77777655 3332 4778999999999999863 11 11233111 22
Q ss_pred -CCceEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhc
Q 048614 108 -TMSLIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 108 -~~~~~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~ 151 (165)
..--+|+|..+ ..|-+-+..++... -+--||=+.|--+|.+
T Consensus 98 f~DvYiV~elMe---tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA 144 (359)
T KOG0660|consen 98 FNDVYLVFELME---TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA 144 (359)
T ss_pred cceeEEehhHHh---hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc
Confidence 22345666554 46666666665221 2333444444445544
No 445
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=21.48 E-value=1.8e+02 Score=25.62 Aligned_cols=48 Identities=13% Similarity=0.044 Sum_probs=32.2
Q ss_pred EEcCCCceEEEecCCCCchHHHHHHHcCCC-C-----HHHHHHHHHHHHHHHhcc
Q 048614 104 HFDRTMSLIGMRYLEPPHIILRKGLIAGIK-Y-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 104 ~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~-~-----~~~a~~iG~~La~~h~~t 152 (165)
+-+..--++|||.+. ++..+-..-..|.. | ..+..+||..+.-+|...
T Consensus 128 ~~~rkcLLiVmE~me-GGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n 181 (400)
T KOG0604|consen 128 YQGRKCLLIVMECME-GGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN 181 (400)
T ss_pred ccCceeeEeeeeccc-chHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc
Confidence 334556689999998 56555444444542 2 367788899999888754
No 446
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=21.46 E-value=4.7e+02 Score=24.18 Aligned_cols=81 Identities=19% Similarity=0.070 Sum_probs=58.2
Q ss_pred ecCCCceeEEEEEEeC----C----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCC-----CCCceEEE
Q 048614 39 EVGDGNLNFVYIVVGS----S----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCP-----DHVPEVYH 104 (165)
Q Consensus 39 ~l~~Gn~N~v~rv~~~----~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p-----~~vP~v~~ 104 (165)
.+|.|...-|++.... . . .|.||...+.... ...+....|.++|+..+...- +.+.+
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~------~~~~~~~~El~~m~~~g~H~niv~llG~~t~--- 373 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS------SEKKDLMSELNVLKELGKHPNIVNLLGACTQ--- 373 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCc------HHHHHHHHHHHHHHHhcCCcchhhheeeecc---
Confidence 8889999989888643 1 2 6888887766532 345677888999999987511 22233
Q ss_pred EcCCCceEEEecCCCCchHHHHHHHcCC
Q 048614 105 FDRTMSLIGMRYLEPPHIILRKGLIAGI 132 (165)
Q Consensus 105 ~D~~~~~~vMEdL~~~~~~lr~~l~~g~ 132 (165)
.....+|+||+. +.+|+..|.+.+
T Consensus 374 --~~~~~~v~Ey~~--~G~L~~~Lr~~r 397 (609)
T KOG0200|consen 374 --DGPLYVIVEYAE--HGDLLEFLRKKR 397 (609)
T ss_pred --CCceEEEEEecc--CCcHHHHHHhcc
Confidence 678899999998 568888887766
No 447
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=20.98 E-value=6.7e+02 Score=23.42 Aligned_cols=104 Identities=22% Similarity=0.295 Sum_probs=64.3
Q ss_pred eeEecCCCceeEEEEEEeC-CCe-EEEeecCccccccC--CCCCCChHHHHHHHHHHHHhhccCCCCC--ce-EEEEcCC
Q 048614 36 TIKEVGDGNLNFVYIVVGS-SGS-FVIKQALPYVRCIG--ESWPMTKERAYFEALALKEHGQLCPDHV--PE-VYHFDRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rv~~~-~gs-vIvKqa~p~~r~~~--~~~~l~~~R~~~E~~~L~~~~~~~p~~v--P~-v~~~D~~ 108 (165)
.++.||.|.-.-||+..+. +|. |-+| ++|... ++.+. =+..|..+|+.+.- |..+ =. +..-+..
T Consensus 121 ki~kIGeGTyg~VYkAr~~~tgkivALK----Kvr~d~~~~~~~~---t~~REI~ILr~l~H--pNIikL~eivt~~~~~ 191 (560)
T KOG0600|consen 121 KIEKIGEGTYGQVYKARDLETGKIVALK----KVRFDNEKEGFPI---TAIREIKILRRLDH--PNIIKLEEIVTSKLSG 191 (560)
T ss_pred HHHHhcCcchhheeEeeecccCcEEEEE----EeecccCCCcchH---HHHHHHHHHHhcCC--CcccceeeEEEecCCc
Confidence 6788999999999999876 454 4455 455422 33444 45679999988855 2211 11 1111345
Q ss_pred CceEEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhc
Q 048614 109 MSLIGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 109 ~~~~vMEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~ 151 (165)
..-+|+||.. | .|-..+..+ ..| ..+..||-.-|...|..
T Consensus 192 siYlVFeYMd--h-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~ 237 (560)
T KOG0600|consen 192 SIYLVFEYMD--H-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR 237 (560)
T ss_pred eEEEEEeccc--c-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc
Confidence 6778999997 4 454445453 332 24666777777777754
No 448
>cd01716 Hfq Hfq, an abundant, ubiquitous RNA-binding protein, functions as a pleiotrophic regulator of RNA metabolism in prokaryotes, required for transcription of some transcripts and degradation of others. Hfq binds small RNA molecules called riboregulators that modulate the stability or translation efficiency of RNA transcripts. Hfq binds preferentially to unstructured A/U-rich RNA sequences and is similar to the eukaryotic Sm proteins in both sequence and structure. Hfq forms a homo-hexameric ring similar to the heptameric ring of the Sm proteins.
Probab=20.52 E-value=1.3e+02 Score=19.58 Aligned_cols=27 Identities=19% Similarity=0.304 Sum_probs=20.0
Q ss_pred CCceeEEEEEEeCCC-eEEEeecCcccc
Q 048614 42 DGNLNFVYIVVGSSG-SFVIKQALPYVR 68 (165)
Q Consensus 42 ~Gn~N~v~rv~~~~g-svIvKqa~p~~r 68 (165)
-|.=||+-.+...++ .+|.|||...+.
T Consensus 29 ~~fD~ftVll~~~g~qqLIYKhAISTI~ 56 (61)
T cd01716 29 ESFDNFTVLLESDGKQQLVYKHAISTIT 56 (61)
T ss_pred EEEcceEEEEEECCcEEEEEeeeeEEEe
Confidence 355678877776654 799999987764
No 449
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=20.50 E-value=93 Score=27.00 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=57.3
Q ss_pred eEecCCCceeEEEEEEeCCC--eEEEeecC-ccccccCCCCCCChHHHHHHHH---HHHHhhccCCCCCceEEEEcCCCc
Q 048614 37 IKEVGDGNLNFVYIVVGSSG--SFVIKQAL-PYVRCIGESWPMTKERAYFEAL---ALKEHGQLCPDHVPEVYHFDRTMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rv~~~~g--svIvKqa~-p~~r~~~~~~~l~~~R~~~E~~---~L~~~~~~~p~~vP~v~~~D~~~~ 110 (165)
...+|.|-.-.+..+.-... .+|+|--. |+... .-...|+- .|.-++.++- +-++-+--.+-+
T Consensus 29 ~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~---------~dF~rEfhY~~~Ls~H~hIi~--tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 29 NKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQ---------ADFVREFHYSFFLSPHQHIID--TYEVAFQTSDAY 97 (378)
T ss_pred HHHhcccceeeEEeeeccCCceEEEeeccCcchhhH---------HHHHHHhccceeeccchhhhH--HHHHHhhcCceE
Confidence 34578898888888876533 56766433 22221 11222222 1111111111 122233344678
Q ss_pred eEEEecCCCCchHHHHHHHcC---CCC-HHHHHHHHHHHHHHHhc
Q 048614 111 LIGMRYLEPPHIILRKGLIAG---IKY-PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~~vMEdL~~~~~~lr~~l~~g---~~~-~~~a~~iG~~La~~h~~ 151 (165)
+|+||+.+ ...|+...-.. +.. ..+++++...+.-+|..
T Consensus 98 vF~qE~aP--~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsk 140 (378)
T KOG1345|consen 98 VFVQEFAP--RGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSK 140 (378)
T ss_pred EEeeccCc--cchhhhhcCcccccHHHHHHHHHHHHHHHHHhhcc
Confidence 99999998 56888766552 223 46788888888887754
No 450
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=20.40 E-value=6e+02 Score=23.46 Aligned_cols=103 Identities=14% Similarity=0.059 Sum_probs=56.7
Q ss_pred ceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE----EcCC--
Q 048614 35 LTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH----FDRT-- 108 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~----~D~~-- 108 (165)
.+++.+++.-+|....+. .++|+|.=+--. .|....+-..|...|+. =.+||.++. .|.+
T Consensus 168 ~~~r~l~~EQSNtSi~~g---~~~ilKlyRrl~--~G~nPe~E~~r~Lte~g---------f~~vP~llG~v~~~~~~g~ 233 (528)
T TIGR02457 168 PEVRLLSAEQSNSSLVVG---DRVVLKLYRKVE--PGINPEIEMGRYLTAAG---------YANIPPLLGSVERVGGDQA 233 (528)
T ss_pred CceeecCCCcCceEEEEC---CEEEEEEecccC--CCCCcchHHHHHHHhCC---------CccCCcccEEEEEEcCCCC
Confidence 456788888888664442 389999833221 23333444445554421 123444433 3433
Q ss_pred --CceEEEecCCCCchH-------HHHHHHc---------------CCCCHHHHHHHHHHHHHHHhc
Q 048614 109 --MSLIGMRYLEPPHII-------LRKGLIA---------------GIKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 109 --~~~~vMEdL~~~~~~-------lr~~l~~---------------g~~~~~~a~~iG~~La~~h~~ 151 (165)
.-.++.+|+++..-- ++..+.+ +..+...+..||.-+|.+|..
T Consensus 234 ~~tla~lq~fV~nqgDaW~~tl~~l~r~~e~~~~~~~~~~~~~~~~~~~~~~~a~~LG~rtAemH~a 300 (528)
T TIGR02457 234 PHTLGLLQGYVQNQGDAWRWTLGHLKRYIEEQLSPCANGALAPTLIGAGYLEFAGLLGRRLAELHLA 300 (528)
T ss_pred EEeeehHhhhhCCCccHHHHHHHHHHHHHHhhhccccccccChhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 233455899852222 3333321 123556799999999999964
No 451
>PF07409 GP46: Phage protein GP46; InterPro: IPR010877 This entry is represented by Bacteriophage Mu, Gp46. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=20.19 E-value=3.5e+02 Score=19.75 Aligned_cols=29 Identities=17% Similarity=0.323 Sum_probs=23.4
Q ss_pred cceeEecCCCceeEEEEEEeCCC-eEEEee
Q 048614 34 ALTIKEVGDGNLNFVYIVVGSSG-SFVIKQ 62 (165)
Q Consensus 34 ~~~v~~l~~Gn~N~v~rv~~~~g-svIvKq 62 (165)
+++++..+.|.+++.-.|..++| ..-+++
T Consensus 83 ~V~a~~~~~~~L~l~I~i~~~dG~~~~~~~ 112 (116)
T PF07409_consen 83 TVTAERPGPGRLALTITITKPDGSTQTFTF 112 (116)
T ss_pred EEEEEEcCCCEEEEEEEEEcCCCCEEEEEE
Confidence 56888999999999999999988 444554
Done!